BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00019907
         (1946 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   684   0.0  
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   659   0.0  
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   651   0.0  
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   645   0.0  
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   636   e-179
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   635   e-179
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   635   e-179
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     629   e-177
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   625   e-176
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   618   e-174
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   605   e-170
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   603   e-170
gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus...   603   e-169
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   598   e-168
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   588   e-165
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t...   582   e-163
ref|XP_004502613.1| PREDICTED: RNA polymerase sigma factor sigE,...   579   e-162
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,...   578   e-162
ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phas...   577   e-162
ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,...   575   e-161

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  684 bits (1765), Expect = 0.0
 Identities = 353/500 (70%), Positives = 407/500 (81%), Gaps = 1/500 (0%)
 Frame = -3

Query: 1659 GLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPSK 1480
            GL+AKFS  ++P +RP++LAFK DK KNI L  P + IPLPIET K+H+K  RR +KPSK
Sbjct: 18   GLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKRLRRASKPSK 77

Query: 1479 RVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQ- 1303
            RVKAV+TDEVS  + +LDYNEAAAKLENIYKLSP TDVS+ ED+   V++GR+ RK    
Sbjct: 78   RVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRVTL 137

Query: 1302 GDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIEKL 1123
             D KA K  +D+VVR   KK  RL+L+ RI L K  +++ V+SI +K+ SK+ED  I+ L
Sbjct: 138  ADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVASIQKKRDSKNEDENIDVL 197

Query: 1122 VREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTDG 943
            VREYS STDLV LDWKKMKIPPVLP SEHAWLFKLMQPM  LL+VK+N+Q + GRE TDG
Sbjct: 198  VREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTDG 257

Query: 942  ELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAGV 763
            ELAEA + S  QVR+ +EVGQAAR+KLIKHNLRLVLFVINKYFQEFANGP+F DLCQAGV
Sbjct: 258  ELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGV 317

Query: 762  RGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLEL 583
            +GLITAIDRFEP R FRLSTYGLFWIRHAI+RSMTLSSFTRVSFGLESVR+EIQRAKLEL
Sbjct: 318  KGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLEL 377

Query: 582  LFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXXX 403
            LF+L+RLPTE+EI E+VGISPERY EVMRASK+V+SLHARHA TQEE+            
Sbjct: 378  LFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHATTQEEYINGITDVEGVGG 437

Query: 402  DKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE 223
            D+ RQ A            LKPKES+V+RQRYGLDGKGDRTLGEIAGNL+ISREMVRKHE
Sbjct: 438  DRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISREMVRKHE 497

Query: 222  VKALMKLKHPARVDYLRRYI 163
            VKALMKLKHPARVDYLR+YI
Sbjct: 498  VKALMKLKHPARVDYLRQYI 517


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
            [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
            factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  659 bits (1700), Expect = 0.0
 Identities = 347/501 (69%), Positives = 393/501 (78%), Gaps = 1/501 (0%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LGLS KFSTQR  S+RP+ +AFK DK  N  L  PQ+ I LPIET KEH K R +  K  
Sbjct: 15   LGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETAKEHPKRRGKAKKDP 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTA- 1306
            K V  V TD+ S  T ++DYNEAAAKLENIYKLSP T  SD+E++   +K  R+ RK + 
Sbjct: 75   KIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVEGKIKGRRQRRKRSK 134

Query: 1305 QGDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIEK 1126
            + D+K V      VVRN+  ++ RL+LDNRI L+K  E++ V S+ RKK S++E  KI++
Sbjct: 135  ESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVRRKKSSENESEKIDR 194

Query: 1125 LVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTD 946
            LVR+YS STDLV LDW+KMKIPPVLPS EH WLFKLMQPM ALLQ KEN+Q + GR+ T+
Sbjct: 195  LVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQAKENLQKDLGRDPTE 254

Query: 945  GELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAG 766
             ELAEATN S  QVRK LEVGQAAR+KLIKHNLRLVLF INKYFQ+FANGPRF DLCQAG
Sbjct: 255  DELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQDFANGPRFQDLCQAG 314

Query: 765  VRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLE 586
            V+GLITAIDRFEP RRFRLSTY LFWIRHAIIRSMTLSSFTRVSFGLESVR+EIQRAKLE
Sbjct: 315  VKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLE 374

Query: 585  LLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXX 406
            LLFEL R PTE+EI ++VGISPERY+EVMRASK V SLH+RH+VTQEEF           
Sbjct: 375  LLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVTQEEFINGITDIDGVG 434

Query: 405  XDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 226
             D RRQPA            LKPKES+VIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH
Sbjct: 435  GDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 494

Query: 225  EVKALMKLKHPARVDYLRRYI 163
            EVKALMKLKHPARVDYLRRY+
Sbjct: 495  EVKALMKLKHPARVDYLRRYV 515


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415472|gb|EMJ20209.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  651 bits (1680), Expect = 0.0
 Identities = 344/504 (68%), Positives = 401/504 (79%), Gaps = 4/504 (0%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LGLS K + QRS  ++P+I+AFKTD+     L APQ+ IPLPIET K+HQK   +  K +
Sbjct: 15   LGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETRKKHQKRLGKARKLA 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDV-SDMEDMGCTVKKGRRTRK-T 1309
            K VK+  TD  S  T ++DYNEAAAKLEN+YK SP T+  SD+ED+   +++GR+ RK T
Sbjct: 75   KSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKKT 134

Query: 1308 AQGDK-KAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHS-KDEDVK 1135
            ++ D  K   RT++ VVRNR KK  RL+L+ R+ L+   +++V+SSI RK+ S K+E+ K
Sbjct: 135  SESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEK 194

Query: 1134 IEKLVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRE 955
            IE+LVREYS STDLV LDWKKMKIPPVL SSEHAWLFKLMQPM  LL+VKEN+Q + GRE
Sbjct: 195  IEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGRE 254

Query: 954  LTDGELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLC 775
             T+GELAEATN SV QV+K LEVG+AARSKLIKHNLRLVLFV+NKYFQ+FANGP+F DLC
Sbjct: 255  PTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLC 314

Query: 774  QAGVRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRA 595
            QAGV+GLITAIDRFEP R FRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVR EIQ+A
Sbjct: 315  QAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKA 374

Query: 594  KLELLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXX 415
            KL +LF L+R+PTEDEI E+VGISPERY EVMRASK V SLH+RH  TQEEF        
Sbjct: 375  KLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVD 434

Query: 414  XXXXDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMV 235
                D R++PA            LKPKES+VIRQRYGLDGKGDRTLGEIAGNLNISREMV
Sbjct: 435  GVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMV 494

Query: 234  RKHEVKALMKLKHPARVDYLRRYI 163
            RKHEVKALMKLKHPARVDYLRRY+
Sbjct: 495  RKHEVKALMKLKHPARVDYLRRYV 518


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  645 bits (1665), Expect = 0.0
 Identities = 343/500 (68%), Positives = 394/500 (78%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LGLS KFST RS  KR +++AFK DK  +I L  P++  PLPIET     KG++R  K +
Sbjct: 15   LGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIET----SKGKKRRGKTN 70

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQ 1303
            +        EVSS T ++DYNEAAAKLENIYKLSP TD SD++  G   K  +R RKT +
Sbjct: 71   R--------EVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDINGLIRKGRQRKRKTGE 122

Query: 1302 GDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIEKL 1123
            GD+KA  RT+  +VRNR KK  RL+LD RI L+K  E+EVV  I +KK SKD++ KIE+L
Sbjct: 123  GDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRKKKDSKDDNEKIEEL 182

Query: 1122 VREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTDG 943
            VR YS ST+LV LDW+KMKIPPVLPS+EHAWLFKLMQPM  LL VK ++Q N GR+ TDG
Sbjct: 183  VRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPVKADLQKNLGRDPTDG 242

Query: 942  ELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAGV 763
            ELAEATN +V +VRKQLEVG+AAR+KLIKHNLRLV+FV+NKYFQ+FANGPRF DLCQAGV
Sbjct: 243  ELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQDFANGPRFQDLCQAGV 302

Query: 762  RGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLEL 583
            +GLITAIDRFEP RRF+LSTY LFWIRHAIIRSMTLSSFT+VSFGLESVR EIQ+AKLEL
Sbjct: 303  KGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFGLESVRTEIQKAKLEL 362

Query: 582  LFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXXX 403
            L EL+R PTE+EI ERVGIS ERY EV+RA+K  +SLHARHAVTQEEF            
Sbjct: 363  LIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQEEF--INGITDIDGG 420

Query: 402  DKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE 223
            D RRQPA            LKPKES+VIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+E
Sbjct: 421  DNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYE 480

Query: 222  VKALMKLKHPARVDYLRRYI 163
            VKALMKLKHPARVDYLRRY+
Sbjct: 481  VKALMKLKHPARVDYLRRYV 500


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  636 bits (1640), Expect = e-179
 Identities = 339/502 (67%), Positives = 396/502 (78%), Gaps = 2/502 (0%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LGLS++FST+  P KRP+I++FK DK KN  L AP++SI L IET KE++K  RR +K S
Sbjct: 15   LGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETSKENEKRSRRVSKRS 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKT-A 1306
            +RV AVA  E S ST +LDY+EAAAKLE+IYK S  T  S+ E     VK+  RTRK   
Sbjct: 75   ERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQDHLVKRRPRTRKRIV 133

Query: 1305 QGDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKD-EDVKIE 1129
            +GD++A K   D+VV+NR K   RL LD RI L K  E E+V+S +R+K  +D ED KI+
Sbjct: 134  EGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSERRKLKEDTEDEKID 193

Query: 1128 KLVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELT 949
            KLVREYS +TDL  LDWKKMKIPPVLPSSEH WLFKLMQPM A+LQVKEN+Q + GRE T
Sbjct: 194  KLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQVKENLQNDLGREPT 253

Query: 948  DGELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQA 769
            DGE+AEATN   +++RK+LEVG+AAR+KLIKHNLRLVLFV+NKYFQ+FANG RF DLCQA
Sbjct: 254  DGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGSRFQDLCQA 313

Query: 768  GVRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKL 589
            GV+GLITAIDRFEPNR+FRLSTYGLFWIRHAIIRSMT SSFT+V FGLES+R+EIQ+AKL
Sbjct: 314  GVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFGLESIRVEIQKAKL 373

Query: 588  ELLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXX 409
            ELLFEL+R+PT++EI  RVG+SPERY EVM+ SK V SLHAR+  TQEE           
Sbjct: 374  ELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTTQEELINGITDVDGV 433

Query: 408  XXDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 229
              DKR+QPA            LKPKES+VIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 434  DGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 493

Query: 228  HEVKALMKLKHPARVDYLRRYI 163
            HEVKALMKLKHP RVDY+RRYI
Sbjct: 494  HEVKALMKLKHPTRVDYVRRYI 515


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  635 bits (1638), Expect = e-179
 Identities = 339/501 (67%), Positives = 388/501 (77%), Gaps = 1/501 (0%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            +GLS    + RS SKRP+I+AFK DK  N  L +PQ+ IPLPIETPK HQK R    K  
Sbjct: 15   IGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETPKRHQKRRENSRKRL 72

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKT-A 1306
            +RVK V +DE S  T D+DYNEAAAKLENIYKLSP    S+++     VK+GR+ RK   
Sbjct: 73   ERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYADGVVKRGRQRRKRIG 132

Query: 1305 QGDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIEK 1126
            + +KK+   +   VVRN+ K+  RL+LD RIEL +KNEDE V +  RK  SKDE  KIEK
Sbjct: 133  EVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIEL-RKNEDEKVVTKTRKTDSKDEHEKIEK 191

Query: 1125 LVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTD 946
            LVREYS STDLV LDWKKMKIPPVL S+EH WLFKLMQPM   +QVKE +Q + GRE TD
Sbjct: 192  LVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQVKEQLQKDLGREPTD 251

Query: 945  GELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAG 766
             ELAEATN S  QV+K LEVG+AAR+KLIKHNLRLVLFVI KYFQ+FANGPRF DLCQAG
Sbjct: 252  VELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLCQAG 311

Query: 765  VRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLE 586
            V+GLITAIDRFEP RRFRLSTYGLFWIRHAIIRSMT+SSFTRV FGLESVR EIQRAKLE
Sbjct: 312  VKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRGEIQRAKLE 371

Query: 585  LLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXX 406
            LLFEL+R+PT++EI + V ISPERYREVM+ASK ++SLH+RH VTQEEF           
Sbjct: 372  LLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVTQEEFINGITDVDGVE 431

Query: 405  XDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 226
             + +RQPA            LKPKES+VIRQR+GLDGKGDRTLGEIAGNLNISREMVRKH
Sbjct: 432  NENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKH 491

Query: 225  EVKALMKLKHPARVDYLRRYI 163
            EVK LMKLKHP RVDYLR+++
Sbjct: 492  EVKGLMKLKHPTRVDYLRQHM 512


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  635 bits (1638), Expect = e-179
 Identities = 341/501 (68%), Positives = 388/501 (77%), Gaps = 1/501 (0%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LGLS KFST  S +KRP+I+AFK +K  N  L AP + IPLP+ET K  +K   +  K S
Sbjct: 15   LGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETTKG-KKRLGKSKKSS 73

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGR-RTRKTA 1306
             R+KAV T EVS  T  +DYNEAAAKLENIYKLSP TD SD+ED    +++GR R RK +
Sbjct: 74   NRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKIS 132

Query: 1305 QGDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIEK 1126
            +GDK+   RT   +VRNR KK  RL+L+ RI L  KNE+++VSS  ++K  K+E+ KI+ 
Sbjct: 133  EGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGKRKDRKNENEKIDD 192

Query: 1125 LVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTD 946
            LVREYS STDLV LDWKKMKIPPVL SSEH WLFKLMQPM ALLQVKE++Q N G E TD
Sbjct: 193  LVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTD 252

Query: 945  GELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAG 766
             ELA+ATN  V QVRKQ+ VG+AAR+KLIKHNLRLVLFVI KYFQ+FANG +F D CQAG
Sbjct: 253  VELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAG 312

Query: 765  VRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLE 586
            V+GLITAIDRFEP RRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLES+R EIQ+AKLE
Sbjct: 313  VKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLE 372

Query: 585  LLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXX 406
            L F+L+R P EDEI E+V ISPERY EV RASK V+SLH+RH  TQEEF           
Sbjct: 373  LWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEEF--IGGIADVDG 430

Query: 405  XDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 226
             D RRQ A            LKPKES+V+RQRYGLDGKGDRTLGEIAGNLNISREMVRKH
Sbjct: 431  GDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 490

Query: 225  EVKALMKLKHPARVDYLRRYI 163
            EVKALMKLKHP RVDYLRRY+
Sbjct: 491  EVKALMKLKHPTRVDYLRRYV 511


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  629 bits (1622), Expect = e-177
 Identities = 342/506 (67%), Positives = 391/506 (77%), Gaps = 6/506 (1%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPS-KRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKP 1486
            LGLS KFS+ RS   K+P+I+AFK DK     L APQD I LP+ET KE +    +  K 
Sbjct: 15   LGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVETRKEVKSRVGKAKKS 74

Query: 1485 SKRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTA 1306
            S RVKAVATDE S+ST ++DYNEAAAKLENI+KLS     +D+ED      +GRR R   
Sbjct: 75   SNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSS----ADVEDAVGLTSRGRRRRSKV 130

Query: 1305 QG--DKKAVKRTT--DHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKH-SKDED 1141
             G  D++A K++T  D VVRNR KK  RL+L  R+EL++  E+ V   + RK+  S +E+
Sbjct: 131  IGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAVVLVRKRRESLNEE 190

Query: 1140 VKIEKLVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSG 961
             KIEKLVREYS STDLV LDWKKMKIPPVLPSSEH WLFKLMQP+  L QV E++Q   G
Sbjct: 191  EKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLG 250

Query: 960  RELTDGELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHD 781
            RE T+ ELAEATN SV QV++ LE G+AAR+KLIKHNLRLVLFV+NKYFQ+F NGP+F D
Sbjct: 251  REPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQD 310

Query: 780  LCQAGVRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQ 601
            LCQAGVRGLITAIDRFEP RRFRLSTYGLFWIRHAIIRSMT+SSFTRVSFGLESVR EIQ
Sbjct: 311  LCQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQ 370

Query: 600  RAKLELLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXX 421
            +AK+EL FEL+RLPTE+EI E+VGISPERY EVMRASK VISL++RH  TQEEF      
Sbjct: 371  KAKIELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNSRHVTTQEEFINAITD 430

Query: 420  XXXXXXDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISRE 241
                  D RR+PA            LKPKES+VIRQRYGLDGKGDRTLGEIAGNLNISRE
Sbjct: 431  VDGVDGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISRE 490

Query: 240  MVRKHEVKALMKLKHPARVDYLRRYI 163
            MVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 491  MVRKHEVKALMKLKHPARVDYLRRYM 516


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  625 bits (1612), Expect = e-176
 Identities = 334/505 (66%), Positives = 394/505 (78%), Gaps = 5/505 (0%)
 Frame = -3

Query: 1662 LGLSAKF-STQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKP 1486
            LGLS    S+QRS  ++P+I+AF+TDK     L APQ+ +PLPIET K+ QK   +  K 
Sbjct: 15   LGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIETGKKVQKRLGKARKL 74

Query: 1485 SKRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDM-GCTVKKGRRTRKT 1309
             K VKA   +E  +   +LDYNEAAAKLEN+YK SP T+ SD+E++ G  +K+GR+ RK 
Sbjct: 75   PKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENVDGLMIKRGRKRRKK 134

Query: 1308 -AQGDKKAVKRTTDH-VVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSK-DEDV 1138
             ++ D K  KRT+D  VVR+  KK  RL+LD R+ L+   +++V +S+ RK+  K  E+ 
Sbjct: 135  ISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAASVVRKRKDKRSENE 194

Query: 1137 KIEKLVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGR 958
             +E+LVREYS STDLV LDWKKM+IPPVL SSEH WLFKLMQPM  LL+VKE +Q + GR
Sbjct: 195  MMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGR 254

Query: 957  ELTDGELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDL 778
            E   GELAEATN +V QV++ LEVG+AAR+KLIKHNLRLVLFVINKYFQ+FANGP+F DL
Sbjct: 255  EPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDL 314

Query: 777  CQAGVRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQR 598
            CQAGV+GLITAIDRFEP RRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVR EIQ+
Sbjct: 315  CQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQK 374

Query: 597  AKLELLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXX 418
            AKLE+L +L+R+PTEDEI E+VGISPERY EVMRASK V SL++RH+VTQEEF       
Sbjct: 375  AKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRHSVTQEEFINGITDV 434

Query: 417  XXXXXDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREM 238
                 D RR+PA            LKPKES+VIRQRYGLDGKGDRTLGEIAGNLNISREM
Sbjct: 435  DGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREM 494

Query: 237  VRKHEVKALMKLKHPARVDYLRRYI 163
            VRKHEVKALMKLKHPARVDYLRRYI
Sbjct: 495  VRKHEVKALMKLKHPARVDYLRRYI 519


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  618 bits (1594), Expect = e-174
 Identities = 328/502 (65%), Positives = 390/502 (77%), Gaps = 2/502 (0%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LGLS++FS +  P KRP+I++FK D  KN  L +P++SI  PIET KE++K  RR +K +
Sbjct: 15   LGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEKRSRRVSKRT 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKT-A 1306
            +RV AV T E   ST +LDY+EAAAKLE+IYK S  T   + E     VK+  RTRK   
Sbjct: 75   ERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIV 133

Query: 1305 QGDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKD-EDVKIE 1129
            + D++A K   D+VV+NR KK  RL LD RI L K  E ++++S +R+K ++D ED KI+
Sbjct: 134  ESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLNEDTEDEKID 193

Query: 1128 KLVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELT 949
            KLVREYS +TDL  LDWKKMKIPPVLPSSEH WLFKLMQPM A+LQVKEN+Q + GRE T
Sbjct: 194  KLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPT 253

Query: 948  DGELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQA 769
            DGE+AEATN   +++RK+LE G+AAR+KLIKHNLRLVLFV+NKYFQ+FAN  RF DLCQA
Sbjct: 254  DGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQA 313

Query: 768  GVRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKL 589
            GV+GLITAIDRFEPNR+FRLSTYGLFWIRHAIIR MT SSFT+V FGLES+R+EIQ+AKL
Sbjct: 314  GVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFGLESIRVEIQKAKL 373

Query: 588  ELLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXX 409
            ELLFEL+R+PT+DEI +RVG SPERY EVM+ SK + SLHAR+  TQEE           
Sbjct: 374  ELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQEELINGITDVDGV 433

Query: 408  XXDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 229
              DKR+QPA            LKPKES+VIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 434  DGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 493

Query: 228  HEVKALMKLKHPARVDYLRRYI 163
            HEVKALMKLKHP RVDY+RRYI
Sbjct: 494  HEVKALMKLKHPTRVDYVRRYI 515


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  605 bits (1560), Expect = e-170
 Identities = 323/504 (64%), Positives = 380/504 (75%), Gaps = 6/504 (1%)
 Frame = -3

Query: 1656 LSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPSKR 1477
            L  KFS   S  KRP I+AFK DK  N  L +P + + LP+E+    +K     +KP KR
Sbjct: 17   LGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRRKKRSGNTSKPLKR 76

Query: 1476 VKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQGD 1297
            VKAV  DE +  + DLDYNEAAAKLENI+KLSP T+ SD E   C   K  R+++  +  
Sbjct: 77   VKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKE---C---KDGRSKRGQKRS 130

Query: 1296 KKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKN------EDEVVSSIDRKKHSKDEDVK 1135
            KK+  R  D +VRN+ K++ RL LD RI L+ K       E + V S+ ++K +K+ED +
Sbjct: 131  KKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVPSLRKQKETKNEDDE 190

Query: 1134 IEKLVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRE 955
            I++LVR+YS STDLV LDWKKMKIPPVLPSSEH  LFKL+QPM AL++V+E +Q   GRE
Sbjct: 191  IDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGRE 250

Query: 954  LTDGELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLC 775
             T+GELA ATN +V QVR+QLEVG+AAR+KLIKHNLRLVLFVINKYF++FA+GP+F DLC
Sbjct: 251  PTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLC 310

Query: 774  QAGVRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRA 595
            QAGV+GLITAIDRFEP R+FRLSTY LFWIRHAIIRSMTLSSFTRVSFGL+SVR+EIQRA
Sbjct: 311  QAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRA 370

Query: 594  KLELLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXX 415
            KLELL EL RLPTE EIT +VGIS ERY EVMRA+K V SLH+RH+ T EE         
Sbjct: 371  KLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVE 430

Query: 414  XXXXDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMV 235
                D RRQPA            LKPKES+VIRQRYGLDGKG+RTLGEIAGNLNISREMV
Sbjct: 431  GTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMV 490

Query: 234  RKHEVKALMKLKHPARVDYLRRYI 163
            RKHEVKALMKLKHPARVDYLRRY+
Sbjct: 491  RKHEVKALMKLKHPARVDYLRRYL 514


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  603 bits (1556), Expect = e-170
 Identities = 322/503 (64%), Positives = 380/503 (75%), Gaps = 5/503 (0%)
 Frame = -3

Query: 1656 LSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPSKR 1477
            L  KFS   S  KRP I+AFK DK  N  L +P + + LP+E+    +K     +KP KR
Sbjct: 17   LGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRRKKRSGNTSKPLKR 76

Query: 1476 VKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQGD 1297
            VKAV  DE +  + DLDYNEAAAKLENI+KLSP T+ SD E   C   K  R+++  +  
Sbjct: 77   VKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKE---C---KDGRSKRGQKRS 130

Query: 1296 KKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDE-----DVKI 1132
            KK+  R  D +VRN+ K++ RL LD RI L+ K E + V+ + ++K +K+E     D +I
Sbjct: 131  KKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKDTKNEADEIDDDEI 190

Query: 1131 EKLVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGREL 952
            ++LVR+YS STDLV LDWKKMKIPPVLPSSEH  LFKL+QPM AL++V+E +Q   GRE 
Sbjct: 191  DRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGREP 250

Query: 951  TDGELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQ 772
            T+GELA ATN +V QVR+QLEVG+AAR+KLIKHNLRLVLFVINKYF++FA+GP+F DLCQ
Sbjct: 251  TEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQ 310

Query: 771  AGVRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAK 592
            AGV+GLITAIDRFEP R+FRLSTY LFWIRHAIIRSMTLSSFTRVSFGL+SVR+EIQRAK
Sbjct: 311  AGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAK 370

Query: 591  LELLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXX 412
            LELL EL RLPTE EIT +VGIS ERY EVMRA+K V SLH+RH+ T EE          
Sbjct: 371  LELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEG 430

Query: 411  XXXDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVR 232
               D RRQPA            LKPKES+VIRQRYGLDGKG+RTLGEIAGNLNISREMVR
Sbjct: 431  TGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVR 490

Query: 231  KHEVKALMKLKHPARVDYLRRYI 163
            KHEVKALMKLKHPARVDYLRRY+
Sbjct: 491  KHEVKALMKLKHPARVDYLRRYL 513


>gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus guttatus]
          Length = 515

 Score =  603 bits (1554), Expect = e-169
 Identities = 315/501 (62%), Positives = 384/501 (76%), Gaps = 1/501 (0%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LGL+ ++ T+ S  +RP++ AFK DK K I L +P++S  LP+E  K+++K  R+  K +
Sbjct: 15   LGLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRESAALPLEATKDNEKRLRKVKKRA 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQ 1303
            +RV AV+TDE   ST DLDYNEAAAKLE I+K SPT ++S  E     VK+ +  ++T  
Sbjct: 75   ERVNAVSTDEAPPSTIDLDYNEAAAKLEYIFKQSPTVEISVDEVKDVRVKRRQPRKRTEY 134

Query: 1302 GDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSK-DEDVKIEK 1126
             D+   ++  D+VVR+R  K  RL L+ RI L  K EDE  +   R+K  K DED KI++
Sbjct: 135  ADE--AEKIADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIFQRRKTGKNDEDEKIDR 192

Query: 1125 LVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTD 946
            LVR+YS S+DLV LDWKKMKIPPVLPS+EH WLFKLMQP+ A+L VKE ++ N GRE TD
Sbjct: 193  LVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAILDVKETIENNLGREPTD 252

Query: 945  GELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAG 766
             +LA A N    Q+RKQLE+G+AAR+KLIKHNLRLVLFV+NKYFQ+F+NG RF DLCQAG
Sbjct: 253  EKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYFQDFSNGSRFQDLCQAG 312

Query: 765  VRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLE 586
             +GLITAIDRFEP R+ RLSTYGLFWIRH+IIRSMTLSSFT+VSFGLESVR+EI++AKLE
Sbjct: 313  AKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVSFGLESVRVEIRKAKLE 372

Query: 585  LLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXX 406
            L+FEL+RLPT++EI  RVGIS ERY EVMR SK +ISLHARH+VTQEEF           
Sbjct: 373  LMFELKRLPTDEEIVGRVGISQERYHEVMRVSKPIISLHARHSVTQEEFINGITDVDGVE 432

Query: 405  XDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 226
             D+R+QPA            LKPKE++VIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+
Sbjct: 433  GDRRKQPALLRLALDDVLDSLKPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKY 492

Query: 225  EVKALMKLKHPARVDYLRRYI 163
            EVKALMKLKH ARVDYLRRY+
Sbjct: 493  EVKALMKLKHRARVDYLRRYV 513


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  598 bits (1541), Expect = e-168
 Identities = 309/500 (61%), Positives = 381/500 (76%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            L L+ +  + +   KRPIILAFK +K     L +PQ+ IPLP+ET K+HQK   + ++  
Sbjct: 15   LRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETAKKHQKRVGKTSESL 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQ 1303
            KRV+AV+T E S  T D+DYNEAAAKLENIYKLSP +D  ++ED+   +++  R RK   
Sbjct: 75   KRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLRRRKKVS 134

Query: 1302 GDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIEKL 1123
             ++       D+VVRN+ KK  RL+LD RI L+   ++EV+    +K++ K+    I+ L
Sbjct: 135  EERD--DGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKNRVQNIDVL 192

Query: 1122 VREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTDG 943
            +R+YS STDLV +DWKKMKIPPVLPSSEHAWLFKLMQPM ALLQ KE+++    +E+T G
Sbjct: 193  IRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDLK-EVDKEITGG 251

Query: 942  ELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAGV 763
            ELA+ATN S+ QVRK +EVG+AAR+KLIKHNLRLVLFVINKYFQ+FA+GPRF DLCQAGV
Sbjct: 252  ELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGV 311

Query: 762  RGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLEL 583
            +GLITAIDRFEP RR +LSTY LFWIRH+I+RS+TLSSFTRV FGLE VR++IQR KL+L
Sbjct: 312  KGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKL 371

Query: 582  LFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXXX 403
             FEL+R PTE+E+ ER+GIS ERY EVM+ASK ++SLH+RH  TQEE+            
Sbjct: 372  TFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQEEYINGITDVDGVNG 431

Query: 402  DKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE 223
            D RRQ A            LKPKES+VIRQRYGLDGKGDRTLGEIAGNLNISRE+VRKHE
Sbjct: 432  DNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREIVRKHE 491

Query: 222  VKALMKLKHPARVDYLRRYI 163
            VKALMKLKHPAR+DYLRRY+
Sbjct: 492  VKALMKLKHPARLDYLRRYV 511


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
            gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
            [Glycine max]
          Length = 512

 Score =  588 bits (1517), Expect = e-165
 Identities = 307/500 (61%), Positives = 378/500 (75%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            L L+ + ++ +   KRP+I+AFK +K     L +PQ+ IPLPIET K+ QK   + ++  
Sbjct: 15   LRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETAKKDQKRVGKTSESL 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQ 1303
            KRV+AV+  E S  T D+DYNEAAAKLENIYKLSP +D  +MED+   V++    R+   
Sbjct: 75   KRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDIDSKVERVLWRRRKVG 134

Query: 1302 GDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIEKL 1123
             +        D VVRN+ KK  RL+LD RI L+   ++EV+    + ++ K+    I+ L
Sbjct: 135  NEHD--DENCDIVVRNQNKKAKRLSLDKRITLKNNAKEEVIDQTQKIRNVKNRVQNIDVL 192

Query: 1122 VREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTDG 943
            +R+YS STDLV +DWKKMKIP VLPSSEHAWLFKLMQPM ALLQ KE++Q+  G+E+TDG
Sbjct: 193  IRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQAKEDLQS-VGKEITDG 251

Query: 942  ELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAGV 763
            ELA+ATN S+ QVRK +EVG+AAR+KLIKHNLRLVLFVI+KYFQ+FA+G RF DLCQAGV
Sbjct: 252  ELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQDFASGRRFQDLCQAGV 311

Query: 762  RGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLEL 583
            +GLITAIDRFEP RR +LSTY LFWIRH+I+RS+TLSSFTRV FGLE VR++IQR KL+L
Sbjct: 312  KGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKL 371

Query: 582  LFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXXX 403
             FEL+R PTE+E+ ER+GISPERY EVM+ASK ++SLH+RH  TQEE+            
Sbjct: 372  TFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHITTQEEYINGITDVDGVNG 431

Query: 402  DKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE 223
            D RRQ A            LKPKES+VIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE
Sbjct: 432  DNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE 491

Query: 222  VKALMKLKHPARVDYLRRYI 163
            VKALMKLKHPAR+DYLRRY+
Sbjct: 492  VKALMKLKHPARLDYLRRYV 511


>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
            gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
            rpoD [Medicago truncatula]
          Length = 514

 Score =  582 bits (1500), Expect = e-163
 Identities = 306/500 (61%), Positives = 370/500 (74%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LGL+AKFST     KRP+ +AFK DK  +  L A Q+ IP  ++  K H+K   +  K  
Sbjct: 15   LGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPAKTHKKRIAKTNKLP 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQ 1303
            K+ +AV T+E   S+ D+DYNEAAA LENIYKLSPTTD+ D + +   +K+  R  K   
Sbjct: 75   KKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIERKIKRVSRRGKKI- 133

Query: 1302 GDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIEKL 1123
            GD       +D VVRN+  K  R+ LD RI L+     E V    +K++ +    KI++L
Sbjct: 134  GDVSKEDSNSDRVVRNQKTKAKRMNLDERIALKTSENSEDVIPTRKKRNPRSRVEKIDEL 193

Query: 1122 VREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTDG 943
            +REYSV  DLV LDWKKMKIPPVLPSSEHA+LFKLMQPM ALLQVK+++Q    RE T+ 
Sbjct: 194  LREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQVKDDLQKELEREPTED 253

Query: 942  ELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAGV 763
            E+A+ATN   TQV+K +EVG+AAR+KLIKHNLRLVLFVIN+YF +FAN PRF DLCQAGV
Sbjct: 254  EIADATNMHTTQVKKAIEVGRAARNKLIKHNLRLVLFVINRYFSDFANSPRFQDLCQAGV 313

Query: 762  RGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLEL 583
            +GLIT+IDRFEPNRRFRLSTY LFWIRHAIIRSMTL+SF+RV FGLESVR EI+RAK+EL
Sbjct: 314  KGLITSIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLASFSRVPFGLESVRAEIRRAKIEL 373

Query: 582  LFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXXX 403
             F+L+R PTE+EI E+V +SPERYR+VM+ASK ++SLH+RH  TQEEF            
Sbjct: 374  SFQLQRSPTEEEIIEKVHVSPERYRDVMKASKPLLSLHSRHLTTQEEFINGVVDDGGVDG 433

Query: 402  DKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE 223
            D RRQPA            LKPKE++VIRQR+GLDGKGDRTLGEIA NLNISREMVRKHE
Sbjct: 434  DNRRQPALLRLALDDVLDSLKPKENLVIRQRFGLDGKGDRTLGEIASNLNISREMVRKHE 493

Query: 222  VKALMKLKHPARVDYLRRYI 163
            VKALMKLKH AR+DYLRRY+
Sbjct: 494  VKALMKLKHSARLDYLRRYV 513


>ref|XP_004502613.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cicer arietinum]
          Length = 513

 Score =  579 bits (1493), Expect = e-162
 Identities = 308/501 (61%), Positives = 371/501 (74%), Gaps = 1/501 (0%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LGL  KFS+     KRP+ +AFK DK  +  L A Q+ IP+ ++T K H+K   +  K  
Sbjct: 15   LGLKTKFSSHHPVLKRPLTVAFKGDKQNDTTLVATQEKIPMQVDTAKTHKKRIAKTKKLP 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQ 1303
            K+ + V T+E   S+ D+DYNEAAA LENIYKLSPT+DV + + + C +K+  R  K   
Sbjct: 75   KKARVVFTEETFPSSLDVDYNEAAAILENIYKLSPTSDVCNADYIDCKIKRVSRRGKKI- 133

Query: 1302 GDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDV-KIEK 1126
            GD    +   D VVRN+  K  RL LD RI L+K N ++ + +  RKK +    + KI++
Sbjct: 134  GDVSKEELDNDRVVRNQNVKAKRLDLDERIALKKNNSEDAIPT--RKKRNVTSKIEKIDE 191

Query: 1125 LVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTD 946
            L+REYSV  D V LDWKKMKIPPVL SSEHA+LFKLMQPM AL QVKE++Q    RE T+
Sbjct: 192  LLREYSVPADFVSLDWKKMKIPPVLHSSEHAFLFKLMQPMKALHQVKEDLQKELAREPTE 251

Query: 945  GELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAG 766
             ++A+AT+    QV+K +EVG+AAR+KLIKHNLRLVLFVINKYF +FANG RF DLCQAG
Sbjct: 252  DDIADATHMRTAQVKKAIEVGRAARNKLIKHNLRLVLFVINKYFSDFANGSRFQDLCQAG 311

Query: 765  VRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLE 586
            V+GLITAIDRFEPNR+FRLSTY LFWIRHAIIRSMTLSSF+RV FGLESVR EI+RAKLE
Sbjct: 312  VKGLITAIDRFEPNRKFRLSTYSLFWIRHAIIRSMTLSSFSRVPFGLESVRAEIRRAKLE 371

Query: 585  LLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXX 406
            L FEL+R PTE+E+ ERV ISPERYR+VMRASK ++SLH+RH +TQEEF           
Sbjct: 372  LTFELQRPPTEEEVIERVHISPERYRDVMRASKPLLSLHSRHLITQEEFIDRVVDDGGVD 431

Query: 405  XDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 226
             D RRQPA            LKPKE++VIRQR+GLDGKGDRTLGEIA NLNISREMVRKH
Sbjct: 432  GDNRRQPALLRLALDDVLDSLKPKENLVIRQRFGLDGKGDRTLGEIASNLNISREMVRKH 491

Query: 225  EVKALMKLKHPARVDYLRRYI 163
            EVKALMKLKH AR+DYLRRY+
Sbjct: 492  EVKALMKLKHAARLDYLRRYV 512


>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 2 [Solanum
            lycopersicum]
          Length = 487

 Score =  578 bits (1491), Expect = e-162
 Identities = 313/501 (62%), Positives = 366/501 (73%), Gaps = 1/501 (0%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LGLS++FS +  P KRP+I++FK D  KN  L +P++SI  PIET KE++K  RR +K +
Sbjct: 15   LGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEKRSRRVSKRT 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKT-A 1306
            +RV AV T E   ST +LDY+EAAAKLE+IYK S  T   + E     VK+  RTRK   
Sbjct: 75   ERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIV 133

Query: 1305 QGDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIEK 1126
            + D++A K   D+VV+NR KK  RL LD RI L K  E                      
Sbjct: 134  ESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEG--------------------- 172

Query: 1125 LVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTD 946
                   +TDL  LDWKKMKIPPVLPSSEH WLFKLMQPM A+LQVKEN+Q + GRE TD
Sbjct: 173  -------ATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPTD 225

Query: 945  GELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAG 766
            GE+AEATN   +++RK+LE G+AAR+KLIKHNLRLVLFV+NKYFQ+FAN  RF DLCQAG
Sbjct: 226  GEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQAG 285

Query: 765  VRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLE 586
            V+GLITAIDRFEPNR+FRLSTYGLFWIRHAIIR MT SSFT+V FGLES+R+EIQ+AKLE
Sbjct: 286  VKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFGLESIRVEIQKAKLE 345

Query: 585  LLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXX 406
            LLFEL+R+PT+DEI +RVG SPERY EVM+ SK + SLHAR+  TQEE            
Sbjct: 346  LLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQEELINGITDVDGVD 405

Query: 405  XDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 226
             DKR+QPA            LKPKES+VIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH
Sbjct: 406  GDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 465

Query: 225  EVKALMKLKHPARVDYLRRYI 163
            EVKALMKLKHP RVDY+RRYI
Sbjct: 466  EVKALMKLKHPTRVDYVRRYI 486


>ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
            gi|561034810|gb|ESW33340.1| hypothetical protein
            PHAVU_001G061400g [Phaseolus vulgaris]
          Length = 511

 Score =  577 bits (1487), Expect = e-162
 Identities = 309/500 (61%), Positives = 372/500 (74%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            L LS K  + +   KR +I+AFK +K     L +P++ IPLP+ET K+H+K   +     
Sbjct: 15   LRLSTKLISLQQAHKRLLIVAFKGNKLNKTTLVSPKEQIPLPLETAKKHRKRIGKTNDSV 74

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQ 1303
            KRV+AV+TDE +  T D+DYNEAAAKLENIYKLS  +   D ED+    K+  R RK   
Sbjct: 75   KRVRAVSTDETTPFTLDVDYNEAAAKLENIYKLSSVSSTCDTEDIDSKTKRVLRRRKNV- 133

Query: 1302 GDKKAVKRTTDHVVRNRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIEKL 1123
            GD+    R    VVRN+ KK  RL+LD RI L++  + EV+    +KK   +    I+ L
Sbjct: 134  GDEHD-DRNDGSVVRNQNKKAKRLSLDKRIALKRNPKQEVIVQA-QKKRDVNRIENIDAL 191

Query: 1122 VREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELTDG 943
            +REYS STDLV +DWKK+KIPPVLPSSEHAWLFKLM+PM  LLQV+E++Q   G+E++DG
Sbjct: 192  IREYSASTDLVSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELLQVREDLQ-EVGKEISDG 250

Query: 942  ELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQAGV 763
            ELA+A + SV QVRK LEVGQAAR+KLIKHNLRLVLFVINKYFQ+FA+GPRF DLCQAGV
Sbjct: 251  ELADANSISVIQVRKALEVGQAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGV 310

Query: 762  RGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKLEL 583
            +GLITAIDRFE  RR +LSTY LFWIRH+I+RS+TLSS TRV FGL+ VR +I RAKLEL
Sbjct: 311  KGLITAIDRFESKRRLQLSTYSLFWIRHSIVRSITLSSLTRVPFGLDRVRADIHRAKLEL 370

Query: 582  LFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXXXX 403
             FEL+R PTE E+ ER+GISPERY +V++ASK +ISLH+RH VTQEEF            
Sbjct: 371  RFELQRSPTEKEVVERIGISPERYYDVLKASKPIISLHSRHIVTQEEFINGITDLDGVDG 430

Query: 402  DKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE 223
            D RRQ A            LKPKES+V+RQRYGLDGKGDRTLGEIAGNLNISREMVRKHE
Sbjct: 431  DNRRQLAVLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE 490

Query: 222  VKALMKLKHPARVDYLRRYI 163
            VKALMKLKHPAR+DYLRRY+
Sbjct: 491  VKALMKLKHPARLDYLRRYV 510


>ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 509

 Score =  575 bits (1482), Expect = e-161
 Identities = 308/502 (61%), Positives = 371/502 (73%), Gaps = 2/502 (0%)
 Frame = -3

Query: 1662 LGLSAKFSTQRSPSKRPIILAFKTDKPKNIGLAAPQDSIPLPIETPKEHQKGRRRGAKPS 1483
            LG + KFST R   KRP+I+AFK DK  +  L A Q+ IP+P+ET K+ QK  +R  K +
Sbjct: 15   LGFNTKFSTHRL--KRPLIVAFKGDKHNDSALVATQEKIPVPVETAKKTQK--KRIGKSN 70

Query: 1482 KRVKAVATDEVSSSTTDLDYNEAAAKLENIYKLSPTTDVSDMEDMGCTVKKGRRTRKTAQ 1303
            K  K     E S S+ D+DYNEAAA LENIYKLSP +   + E +   +K+  R  K   
Sbjct: 71   KLPKR----ESSPSSMDVDYNEAAAMLENIYKLSPASHTGNAECIDDKIKRVSRRGKKVV 126

Query: 1302 GDKKAVKRTTDHVVR--NRCKKVTRLTLDNRIELEKKNEDEVVSSIDRKKHSKDEDVKIE 1129
             + +  +   D VVR  N+ KK  RLTLD RI L+     + V    +K++ ++   KIE
Sbjct: 127  DESEEKELKGDRVVRRQNKNKKAKRLTLDQRISLKNNKRGDEVIPTRKKRNFRNRIEKIE 186

Query: 1128 KLVREYSVSTDLVGLDWKKMKIPPVLPSSEHAWLFKLMQPMNALLQVKENMQTNSGRELT 949
            +L+REYSVS D + +DWK+M+IPPVL SSEHAWLFKLMQPM ALLQVKE++Q    RE  
Sbjct: 187  ELIREYSVSNDFISMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQKELAREPA 246

Query: 948  DGELAEATNTSVTQVRKQLEVGQAARSKLIKHNLRLVLFVINKYFQEFANGPRFHDLCQA 769
            DGELA+ATN S+TQV+K ++VGQAAR+KLIKHNLRLVLFVINKYF +FA+GPRF DLCQA
Sbjct: 247  DGELADATNMSITQVKKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQDLCQA 306

Query: 768  GVRGLITAIDRFEPNRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRMEIQRAKL 589
            GV+GLITAIDRFEPNRRFRLSTY LFWIRHAIIRSMTLSSF RV FGLESVR EIQ+AK 
Sbjct: 307  GVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSSFIRVPFGLESVRAEIQKAKT 366

Query: 588  ELLFELERLPTEDEITERVGISPERYREVMRASKAVISLHARHAVTQEEFXXXXXXXXXX 409
            EL F+L+R PTE+EI ERV ISPERY ++++ASK+++SL++RH  TQEEF          
Sbjct: 367  ELTFKLQRSPTEEEIIERVHISPERYHDIIKASKSILSLNSRHTTTQEEFINGIVDDDGV 426

Query: 408  XXDKRRQPAXXXXXXXXXXXXLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 229
              D R+QPA            LKPKES+VIRQR+GLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 427  NGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRK 486

Query: 228  HEVKALMKLKHPARVDYLRRYI 163
            HEVKALMKL H AR+DYLRRY+
Sbjct: 487  HEVKALMKLNHSARLDYLRRYV 508