BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00019844
         (1070 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66169.1| hypothetical protein 11M19.13 [Arabidopsis halleri]    608   e-171
gb|ABW74585.1| pol polyprotein [Boechera divaricarpa]                 468   e-129
gb|ABW74560.1| polyprotein [Boechera divaricarpa]                     386   e-105
gb|AAF97298.1|AC007843_1 Hypothetical protein [Arabidopsis thali...   365   1e-98
gb|AAZ66952.1| 117M18_33 [Brassica rapa]                              359   9e-97
gb|AAF97281.1|AC010164_3 Hypothetical protein [Arabidopsis thali...   350   8e-94
gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsi...   342   1e-91
gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]              330   8e-88
gb|AAF18643.1|AC006228_14 F5J5.14 [Arabidopsis thaliana]              273   7e-71
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   260   8e-67
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi...   231   4e-58
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   230   9e-58
ref|XP_004171846.1| PREDICTED: uncharacterized protein LOC101226...   217   8e-54
gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein ...   205   2e-50
ref|XP_002488942.1| hypothetical protein SORBIDRAFT_1475s002010 ...   200   7e-49
dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis t...   194   5e-47
dbj|BAB02660.1| unnamed protein product [Arabidopsis thaliana]        188   3e-45
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         180   8e-43
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   179   1e-42
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   179   1e-42

>gb|AFJ66169.1| hypothetical protein 11M19.13 [Arabidopsis halleri]
          Length = 1273

 Score =  608 bits (1568), Expect = e-171
 Identities = 303/356 (85%), Positives = 320/356 (89%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVDKNNIAIGLLFQAMPEALTLQVGDQE 889
            MLNDSNYTVWAM+M++MLKIYHVYDTIEPGSEDVDKNNIA GLLFQAMPEAL LQVGDQE
Sbjct: 21   MLNDSNYTVWAMQMRIMLKIYHVYDTIEPGSEDVDKNNIATGLLFQAMPEALILQVGDQE 80

Query: 888  SPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSSLG 709
            +PK +WDAIKSRHQGADRVKEARLQTLMSEFERI+MKD+ TIDSFSGKLSEIASKSSSLG
Sbjct: 81   TPKAVWDAIKSRHQGADRVKEARLQTLMSEFERIRMKDTYTIDSFSGKLSEIASKSSSLG 140

Query: 708  RKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEETTA 529
             KIEETKLVKKFLNSLPRG+FIQIIASLEQVLDLNKT FEDIVGRLKAYEERI+ EE   
Sbjct: 141  GKIEETKLVKKFLNSLPRGRFIQIIASLEQVLDLNKTGFEDIVGRLKAYEERILDEEAGG 200

Query: 528  ETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRSPNQNNHSQAKEKKDKTKV 349
            E+Q KLLYANTYQQNFN S               RFNSQ+R+ NQNN  QAKEKKD +KV
Sbjct: 201  ESQGKLLYANTYQQNFNNSRGRGRGRGYRGRGRGRFNSQERTTNQNNQGQAKEKKDISKV 260

Query: 348  ICYRCDKPGHYASSCPERTQRMHEANKTETEEADAALYMHEVVLLNEEKIIPRNYEIKEG 169
            +CYRCDKPGHYASSCPER QR HEANKTETEEADAALYMHEVV LNEEK+IPRNYEIK+G
Sbjct: 261  VCYRCDKPGHYASSCPERAQRTHEANKTETEEADAALYMHEVVFLNEEKVIPRNYEIKDG 320

Query: 168  EGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSCIDIGGKGSILFQSKTE 1
            E KVWYLDNGASNHMTGN+ FFSELNEKIKGKVKFGDGSCIDIGGKGSILFQSKTE
Sbjct: 321  EDKVWYLDNGASNHMTGNKTFFSELNEKIKGKVKFGDGSCIDIGGKGSILFQSKTE 376


>gb|ABW74585.1| pol polyprotein [Boechera divaricarpa]
          Length = 551

 Score =  468 bits (1203), Expect = e-129
 Identities = 237/361 (65%), Positives = 288/361 (79%), Gaps = 6/361 (1%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVDKNNIAIGLLFQAMPEALTLQVGDQE 889
            MLN +NYTVWAMRMK+ML+I+ V++TIE  S D+DKN IAIGLLFQ++PE+L LQVG  +
Sbjct: 22   MLNTTNYTVWAMRMKIMLQIHKVWETIEGNSMDIDKNVIAIGLLFQSIPESLILQVGGLD 81

Query: 888  SPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSSLG 709
            S K IW+AIK+RH GA+RVKEARLQTL  EFER++M DSD+ID+FSGKLSE+ASKS++LG
Sbjct: 82   SSKAIWEAIKTRHLGAERVKEARLQTLTYEFERLRMNDSDSIDAFSGKLSELASKSAALG 141

Query: 708  RKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEETTA 529
              IEE KLVKKFLNSLPR K+I IIASLEQVL+LN+T FEDIVGRLKAYEER++ +E   
Sbjct: 142  EVIEEPKLVKKFLNSLPRKKYIHIIASLEQVLNLNETGFEDIVGRLKAYEERVLDDEKQD 201

Query: 528  ETQSKLLY--ANTYQQNFNTS----XXXXXXXXXXXXXXXRFNSQDRSPNQNNHSQAKEK 367
            ETQ KLL+  +N YQ ++++S                   RFNS D + NQ   +Q KEK
Sbjct: 202  ETQGKLLFTESNGYQGSYDSSRGRGRGRGARGRGRGRGQGRFNSHDGTTNQWRQNQNKEK 261

Query: 366  KDKTKVICYRCDKPGHYASSCPERTQRMHEANKTETEEADAALYMHEVVLLNEEKIIPRN 187
            KD++K+IC+RC+K GH+ASSCPE+ Q+  E NK ET+EADAALY+HE+V LNEEKIIP+ 
Sbjct: 262  KDRSKLICFRCEKAGHFASSCPEKPQKNQEVNKVETQEADAALYLHEIVFLNEEKIIPKA 321

Query: 186  YEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSCIDIGGKGSILFQSK 7
            YE K  E   WYLDNGASNHMTG R++F+ELNE IKGKVKFGDGSC+DIGGKGSILFQ K
Sbjct: 322  YETKNEEEGTWYLDNGASNHMTGVRSYFAELNENIKGKVKFGDGSCVDIGGKGSILFQGK 381

Query: 6    T 4
            T
Sbjct: 382  T 382


>gb|ABW74560.1| polyprotein [Boechera divaricarpa]
          Length = 642

 Score =  386 bits (992), Expect = e-105
 Identities = 200/354 (56%), Positives = 252/354 (71%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVDKNNIAIGLLFQAMPEALTLQVGDQE 889
            M N +NYTVWAMRMKV L+++ V+  IE  ++D +KN+IA  LLFQ++ E+L LQ+G+Q+
Sbjct: 1    MFNATNYTVWAMRMKVGLRVHKVWKVIESSNQDSEKNDIATALLFQSISESLILQLGEQD 60

Query: 888  SPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSSLG 709
            + KGIW+AIK+RH GAD V+EARLQTL SEF+R+ MKDSD ID+F+G L EI+S+S++LG
Sbjct: 61   TTKGIWEAIKTRHMGADHVREARLQTLNSEFDRLVMKDSDIIDNFAGNLFEISSRSAALG 120

Query: 708  RKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEETTA 529
              IEE+KLVKKFL SLPR KFI IIAS EQVLDLN T  EDIVGRLKAYEER   EET  
Sbjct: 121  EVIEESKLVKKFLKSLPRYKFIHIIASFEQVLDLNTTGNEDIVGRLKAYEER-NGEETQR 179

Query: 528  ETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRSPNQNNHSQAKEKKDKTKV 349
            E+Q KL+++   Q+                                   + K+KKD +KV
Sbjct: 180  ESQEKLMWSKDKQK-----------------------------------KDKQKKDYSKV 204

Query: 348  ICYRCDKPGHYASSCPERTQRMHEANKTETEEADAALYMHEVVLLNEEKIIPRNYEIKEG 169
            ICYRCDK GH+A +CP+ TQR  E N  ETE AD ALYMHEVV LNEEK++P+ YE +  
Sbjct: 205  ICYRCDKLGHFAKACPKTTQRQQEGNVAETEIADGALYMHEVVCLNEEKVLPKKYEAEGI 264

Query: 168  EGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSCIDIGGKGSILFQSK 7
               +WYLDNGA NHMTGN++FF E++E I  +VKFG+GSC++I GKGSILF  K
Sbjct: 265  YNNIWYLDNGAGNHMTGNKSFFVEMDETIIERVKFGNGSCVEIAGKGSILFVCK 318


>gb|AAF97298.1|AC007843_1 Hypothetical protein [Arabidopsis thaliana]
          Length = 362

 Score =  365 bits (938), Expect = 1e-98
 Identities = 188/352 (53%), Positives = 253/352 (71%), Gaps = 6/352 (1%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVDKNNIAIGLLFQAMPEALTLQVGDQE 889
            MLN +NYTVWA+RM++ L IY V++TI+PGS+D DKN +A GLLFQ++PEALTLQ+G+ +
Sbjct: 21   MLNSNNYTVWAIRMQITLGIYKVWETIDPGSDDFDKNLMARGLLFQSIPEALTLQIGNLQ 80

Query: 888  SPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSSLG 709
            + K +WD+IK+R+ GA+RVKEARLQTLM+EFE+IKMK+++ ID F+GKLSEI++KS++LG
Sbjct: 81   TAKEVWDSIKTRNVGAERVKEARLQTLMAEFEKIKMKETEKIDDFAGKLSEISTKSAALG 140

Query: 708  RKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEETTA 529
              IE  KLVKKFLNSLPR K+I IIASLEQVLDLN TSFEDI+GR+K YE+R+  ++   
Sbjct: 141  VNIEVPKLVKKFLNSLPRKKYIHIIASLEQVLDLNNTSFEDIIGRMKVYEDRVCDDDEPQ 200

Query: 528  ETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRSPNQNNHSQAKEKKDKTKV 349
            E Q+K++YAN+     +T+               R N + R   +N        +D +++
Sbjct: 201  EDQTKMMYANS-----DTNNDYYQGDSRGRGRGGRGNYRGRGRGRNG------GRDTSQI 249

Query: 348  ICYRCDKPGHYASSCPERTQRMHEANKT------ETEEADAALYMHEVVLLNEEKIIPRN 187
            +C+RCDK GHYAS CP+R  ++ EA +       +T+ AD  L MHEVV LNE+  +P  
Sbjct: 250  MCFRCDKLGHYASQCPDRLLKLQEAQENAVNDNKDTQNAD-TLMMHEVVYLNEKNCVPSK 308

Query: 186  YEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSCIDIGGK 31
            +E      + WYLDNGASNHMTG++ +F  LNE I GKV+FGD S IDI GK
Sbjct: 309  FETNIEGDECWYLDNGASNHMTGDKRYFDNLNESITGKVRFGDDSRIDIKGK 360


>gb|AAZ66952.1| 117M18_33 [Brassica rapa]
          Length = 681

 Score =  359 bits (922), Expect = 9e-97
 Identities = 193/341 (56%), Positives = 240/341 (70%), Gaps = 7/341 (2%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVDKNNIAIGLLFQAMPEALTLQVGDQE 889
            MLN SNYTVWAMRMKV LK+  V++TIEPGS+  +KNN+AI L+FQ++PEALTLQVGD E
Sbjct: 24   MLNSSNYTVWAMRMKVALKVNKVWETIEPGSKHEEKNNMAIALMFQSIPEALTLQVGDLE 83

Query: 888  SPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSSLG 709
              K +WDAIK+RH GA+RV+EARLQTLM+EF+R+KMK++DTID F GKLSEI++KS+SLG
Sbjct: 84   DAKAVWDAIKTRHVGAERVREARLQTLMAEFDRLKMKEADTIDYFVGKLSEISAKSASLG 143

Query: 708  RKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVK-EETT 532
              IEE KLVKKFL SLPR K+I ++ASLEQVLDLN TSFEDIVGRLKAYEERI + EE  
Sbjct: 144  EIIEEPKLVKKFLKSLPRKKYIHMVASLEQVLDLNSTSFEDIVGRLKAYEERICEDEEEE 203

Query: 531  AETQSKLLYANTYQQ--NFNTSXXXXXXXXXXXXXXXRFN-SQDRSPNQNNHSQAKEKKD 361
             +   KLLYANT  Q  NFN S               R         NQ    +   ++ 
Sbjct: 204  QDDPGKLLYANTESQTENFNGSRGRGRGGRSNWRGRGRGRYGYGSYQNQREAYRQNTERS 263

Query: 360  KTKVICYRCDKPGHYASSCPERTQRMHEA---NKTETEEADAALYMHEVVLLNEEKIIPR 190
               + C+RCDK GHYA  CP+R  ++ E     +  T+EAD  L M EVV LNE+K+ P 
Sbjct: 264  TAHITCFRCDKQGHYAVDCPDRLLKIQETVEKKEDNTQEAD-ELMMQEVVYLNEQKVKPS 322

Query: 189  NYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVK 67
             +E K+    +WYLDNGASNHM GN+ FF E+++ I GK++
Sbjct: 323  LFENKQDMSNLWYLDNGASNHMCGNQVFFKEIDQGITGKLR 363


>gb|AAF97281.1|AC010164_3 Hypothetical protein [Arabidopsis thaliana]
            gi|12324507|gb|AAG52212.1|AC022288_11 putative gag-pol
            polyprotein; 76173-77576 [Arabidopsis thaliana]
          Length = 467

 Score =  350 bits (897), Expect = 8e-94
 Identities = 183/358 (51%), Positives = 253/358 (70%), Gaps = 7/358 (1%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVDKNNIAIGLLFQAMPEALTLQVGDQE 889
            +LN +NYTVWAM+MKV LK++  +D IE G+ D +KN++A+ LLFQA+PE++ LQ+G+ +
Sbjct: 24   ILNTTNYTVWAMKMKVALKVHKTWDVIETGANDPEKNDMAMHLLFQAIPESMVLQIGELD 83

Query: 888  SPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSSLG 709
            + K +W+AIK ++ GA+RVKEARLQTLM+EF+R+KMKDS+ I++FSG+L+EIASKS++LG
Sbjct: 84   TAKKVWEAIKEKNVGAERVKEARLQTLMNEFDRLKMKDSENIEAFSGRLAEIASKSAALG 143

Query: 708  RKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEE-TT 532
              IE  KLVKKFL SLPR K+IQI+ASLEQVLDL  TSFEDIVGR+K YEER+  EE  T
Sbjct: 144  ENIETEKLVKKFLKSLPRKKYIQIVASLEQVLDLKNTSFEDIVGRIKVYEERVWDEEDET 203

Query: 531  AETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRSPNQNNHSQAKEK---KD 361
             + QSKL+YA++                          S+ R    N   + + +   +D
Sbjct: 204  QDDQSKLMYASSDSNR------------------DYHGSRGRGGRGNYRGRGRGRYGSRD 245

Query: 360  KTKVICYRCDKPGHYASSCPERTQRMHEANKTE---TEEADAALYMHEVVLLNEEKIIPR 190
             ++VIC+RCDK GHYAS CP+R  ++ E  + +   T++AD  L M+E+V LNE+  +P 
Sbjct: 246  LSQVICFRCDKMGHYASQCPDRLLKLQETQENDAKSTKDAD-ELMMNEIVYLNEKHCVPS 304

Query: 189  NYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSCIDIGGKGSILF 16
              E    +  +WYLDNGASNHMTG+R +F++L+  + GKV+FGD S IDI GKG+I F
Sbjct: 305  KIETCGDD--LWYLDNGASNHMTGDRRYFNKLDASVTGKVRFGDDSRIDIKGKGTIAF 360


>gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1307

 Score =  342 bits (878), Expect = 1e-91
 Identities = 174/345 (50%), Positives = 244/345 (70%), Gaps = 4/345 (1%)
 Frame = -3

Query: 1029 MKVMLKIYHVYDTIEPGSEDVDKNNIAIGLLFQAMPEALTLQVGDQESPKGIWDAIKSRH 850
            M+  L+++ V++TI+PGS+D++KN++A  LLFQ++PE+  LQVG  ++ K +W+AIK+R+
Sbjct: 1    MEATLRVHKVWETIDPGSDDMEKNDMARALLFQSVPESTILQVGKHKTSKAMWEAIKTRN 60

Query: 849  QGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSSLGRKIEETKLVKKFL 670
             GA+RVKEA+LQTLM+EF+R+ MKD++TID F G++SEI++KS SLG +IEE+K+VKKFL
Sbjct: 61   LGAERVKEAKLQTLMAEFDRLNMKDNETIDEFVGRISEISTKSESLGEEIEESKIVKKFL 120

Query: 669  NSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEETTAETQSKLLYANTYQ 490
             SLPR K+I IIA+LEQ+LDLN T FEDIVGR+K YE+R+  E+ + E Q KL+YAN+ +
Sbjct: 121  KSLPRKKYIHIIAALEQILDLNTTGFEDIVGRMKTYEDRVCDEDDSPEEQGKLMYANS-E 179

Query: 489  QNFNTSXXXXXXXXXXXXXXXRFNSQDRSPNQNNHSQAKEKKDKTKVICYRCDKPGHYAS 310
             +++T                    + RS  +       +++DK+KVICYRCDK GHYAS
Sbjct: 180  SSYDTRGGRG-------------RGRGRSSGRGRGGYGYQQRDKSKVICYRCDKTGHYAS 226

Query: 309  SCPERTQRMHEANKTETEEAD----AALYMHEVVLLNEEKIIPRNYEIKEGEGKVWYLDN 142
             C +R  ++ +A + +    D     +L MHEVV LNE  + P+ +E        WYLDN
Sbjct: 227  ECLDRLLKLIKAQEQQQNNEDDDEIESLMMHEVVYLNERSVKPKEFEACSDNS--WYLDN 284

Query: 141  GASNHMTGNRAFFSELNEKIKGKVKFGDGSCIDIGGKGSILFQSK 7
            GASNHMTGN  +FS+LNE I GKV+FGD S IDI GKGSI+  +K
Sbjct: 285  GASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITK 329


>gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]
          Length = 1188

 Score =  330 bits (845), Expect = 8e-88
 Identities = 170/322 (52%), Positives = 231/322 (71%), Gaps = 6/322 (1%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVDKNNIAIGLLFQAMPEALTLQVGDQE 889
            MLN +NYTVWA+RM++ L IY V++TI+PGS+D DKN +A GLLFQ++PEALTLQ+G+ +
Sbjct: 21   MLNSNNYTVWAIRMQITLGIYKVWETIDPGSDDFDKNLMARGLLFQSIPEALTLQIGNLQ 80

Query: 888  SPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSSLG 709
            + K +WD+IK+R+ GA+RVKEARLQTLM+EFE+IKMK+++ ID F+GKLSEI++KS++LG
Sbjct: 81   TAKEVWDSIKTRNVGAERVKEARLQTLMAEFEKIKMKETEKIDDFAGKLSEISTKSAALG 140

Query: 708  RKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEETTA 529
              IE  KLVKKFLNSLPR K+I IIASLEQVLDLN TSFEDI+GR+K YE+R+  ++   
Sbjct: 141  VNIEVPKLVKKFLNSLPRKKYIHIIASLEQVLDLNNTSFEDIIGRMKVYEDRVCDDDEPQ 200

Query: 528  ETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRSPNQNNHSQAKEKKDKTKV 349
            E Q+K++YAN+     +T+               R N + R   +N        +D +++
Sbjct: 201  EDQTKMMYANS-----DTNNDYYQGDSRGRGRGGRGNYRGRGRGRNG------GRDTSQI 249

Query: 348  ICYRCDKPGHYASSCPERTQRMHEANKT------ETEEADAALYMHEVVLLNEEKIIPRN 187
            +C+RCDK GHYAS CP+R  ++ EA +       +T+ AD  L MHEVV LNE+  +P  
Sbjct: 250  MCFRCDKLGHYASQCPDRLLKLQEAQENAVNDNKDTQNAD-TLMMHEVVYLNEKNCVPSK 308

Query: 186  YEIKEGEGKVWYLDNGASNHMT 121
            +E      + WYLDNGASNHMT
Sbjct: 309  FETNIEGDECWYLDNGASNHMT 330


>gb|AAF18643.1|AC006228_14 F5J5.14 [Arabidopsis thaliana]
          Length = 743

 Score =  273 bits (699), Expect = 7e-71
 Identities = 158/354 (44%), Positives = 208/354 (58%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVDKNNIAIGLLFQAMPEALTLQVGDQE 889
            ML  +NYTVWA+RM++   +  +++TIEPG +D  KN +A GL+FQ++PE+LTLQVG   
Sbjct: 21   MLTSTNYTVWAIRMQIARSVNKMWETIEPGIDDGYKNTMARGLIFQSIPESLTLQVGTLA 80

Query: 888  SPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSSLG 709
            + K +WD+IK+R+ GADRVKEARLQTLM+EFE++KMK+S+ ID F+G+L+E+A++S +LG
Sbjct: 81   TAKLVWDSIKTRYVGADRVKEARLQTLMAEFEKMKMKESEKIDVFAGRLAELATRSDALG 140

Query: 708  RKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEETTA 529
              IE +KLVKKFLN+LP  K+I IIASLEQVLDLN TSFEDIVGR+K YEER+   E   
Sbjct: 141  SNIETSKLVKKFLNALPLRKYIHIIASLEQVLDLNNTSFEDIVGRIKVYEERVWDGEEQE 200

Query: 528  ETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRSPNQNNHSQAKEKKDKTKV 349
            + Q KL+YANT  Q+                   R   Q    N     + +  +D +KV
Sbjct: 201  DDQGKLMYANTDTQD--------------SWYASRGRGQGGGFNGRGRGRGRGSRDTSKV 246

Query: 348  ICYRCDKPGHYASSCPERTQRMHEANKTETEEADAALYMHEVVLLNEEKIIPRNYEIKEG 169
             CYRCDK GHYAS+CP+        N+    + D ++                       
Sbjct: 247  TCYRCDKLGHYASNCPDSNHM--TGNRAYFSKIDESI----------------------- 281

Query: 168  EGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSCIDIGGKGSILFQSK 7
             GKV                             +FGD SCIDI GKGSILF SK
Sbjct: 282  TGKV-----------------------------RFGDDSCIDIKGKGSILFMSK 306


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  260 bits (664), Expect = 8e-67
 Identities = 139/264 (52%), Positives = 177/264 (67%), Gaps = 4/264 (1%)
 Frame = -3

Query: 783 MKDSDTIDSFSGKLSEIASKSSSLGRKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLN 604
           MKD+D+ID+FSGKLSE A   +SLG  IEE KLVKKFL+ LP  KF+Q+ A+LEQVLDLN
Sbjct: 1   MKDTDSIDTFSGKLSEFAGTVASLGHTIEEAKLVKKFLSCLP-SKFLQLSATLEQVLDLN 59

Query: 603 KTSFEDIVGRLKAYEERIVKEE----TTAETQSKLLYANTYQQNFNTSXXXXXXXXXXXX 436
            T +ED+VGRLKA+EER+  EE       E   KLLY++   +                 
Sbjct: 60  NTRYEDVVGRLKAFEERLRGEERMRGEKLEDNGKLLYSDHGTKGRGRGSNRGRG------ 113

Query: 435 XXXRFNSQDRSPNQNNHSQAKEKKDKTKVICYRCDKPGHYASSCPERTQRMHEANKTETE 256
                N      + N   + KEKKD +++ C+ C K GH+AS CPE+    H+ NK ETE
Sbjct: 114 -----NRGRGRGSSNGGERNKEKKDYSQIECFHCHKKGHFASVCPEKNDD-HQLNKAETE 167

Query: 255 EADAALYMHEVVLLNEEKIIPRNYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKG 76
            A+AALYMHEVV LNEE ++P+  E  + +   WYLDNGASNHMTG+++FFSELNE IKG
Sbjct: 168 VAEAALYMHEVVFLNEESVMPKKLEQNKTDDGNWYLDNGASNHMTGDKSFFSELNESIKG 227

Query: 75  KVKFGDGSCIDIGGKGSILFQSKT 4
           +VKFGDGSC+ I GKGSI+F++KT
Sbjct: 228 RVKFGDGSCVKINGKGSIIFEAKT 251


>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1200

 Score =  231 bits (589), Expect = 4e-58
 Identities = 142/311 (45%), Positives = 190/311 (61%), Gaps = 7/311 (2%)
 Frame = -3

Query: 918 ALTLQVGDQESPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLS 739
           +L LQVG  ++ K +WD I+SR+ GA+RVKEA+L+TLM+EF+++KMKD++TID  +G+LS
Sbjct: 32  SLILQVGKLKTSKAVWDKIQSRNLGAERVKEAKLKTLMAEFDKLKMKDNETIDECAGRLS 91

Query: 738 EIASKSSSLGRKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYE 559
           EI++KS+SLG  IEETK+VKKFL SLP  K+I I+A+LEQVLDL  T+F+DIVGR+K YE
Sbjct: 92  EISTKSTSLGEDIEETKVVKKFLKSLPTKKYIHIVAALEQVLDLKNTTFKDIVGRIKTYE 151

Query: 558 ERI------VKEETTAETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRSPN 397
           ++I      +K+E  AE + K +     ++    S                 N  DR   
Sbjct: 152 DKIWVLITCLKKE--AEEEEKSVVGVEAEEELVISREITLRLLVIAVINYASNCPDR--- 206

Query: 396 QNNHSQAKEKKDKTKVICYRCDKPGHYASSCPERTQRMHEANKTETEEADAALYMHEVVL 217
                         K+I               +  +R  EA   + +E + +L MHEVV 
Sbjct: 207 ------------LLKLI---------------KLQERQQEAEDDDDDEVE-SLMMHEVVY 238

Query: 216 LNEEKIIPRNYEIKEG-EGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSCIDI 40
           LNE  +   N EI E    K WYLDNGASNHMTGNR +F +L+E + GKVKFGD S IDI
Sbjct: 239 LNEGNM---NLEIYEACSDKAWYLDNGASNHMTGNRDWFCKLDEMVTGKVKFGDDSRIDI 295

Query: 39  GGKGSILFQSK 7
            GKGSILF +K
Sbjct: 296 RGKGSILFLTK 306


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  230 bits (586), Expect = 9e-58
 Identities = 137/386 (35%), Positives = 217/386 (56%), Gaps = 33/386 (8%)
 Frame = -3

Query: 1065 LNDSNYTVWAMRMKVMLKIYHVYDTIEPGSE---DVDKNNIAIGLLFQAMPEALTLQVGD 895
            L  +NYT W +R++ M++   V+D IEP +    D  ++  A   L Q++PE L +QV  
Sbjct: 26   LTATNYTSWCIRVQAMMEDQGVWDAIEPAAGVAVDPRRDKKAKSHLLQSLPEDLLMQVAK 85

Query: 894  QESPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSS 715
            + S K +WD +K+R  GADRV+EARLQTL  EF  + M+  +T+D ++G+++ ++ + S+
Sbjct: 86   KRSAKEVWDCLKTRFVGADRVREARLQTLKGEFGAMVMEPGETLDQYAGRITAMSVRHSA 145

Query: 714  LGRKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEE- 538
            LG  + ++ +VKK  +++P  KFI ++A +EQ  +++   FE+ VGRLKAYEER+ K++ 
Sbjct: 146  LGSTLSDSAMVKKLFDTVPE-KFISLVAGIEQFYEIDNMPFEEAVGRLKAYEERVRKKKA 204

Query: 537  ----TTAETQSKLLYA-------------NTYQQNFNTSXXXXXXXXXXXXXXXRFNSQD 409
                 TA+ Q  L  A             ++ Q+N   S               R     
Sbjct: 205  AAGGVTADGQVLLTQAEWEARFRKDGSESSSPQKNKPPSDGGNRAQGGRGRGRGRGGGGG 264

Query: 408  RSPNQNNHSQAKE---KKDKTKVICYRCDKPGHYASSCPERTQRMHEANKTETEEADAAL 238
            RS    N          +DK+ + CY C++ GHY++ CP   ++  EA+  +T++A+ AL
Sbjct: 265  RSSAPRNSGAGGSGGGGRDKSHIKCYNCEEFGHYSTQCPHPKKKKVEAHLAQTDDANPAL 324

Query: 237  YMHEV-------VLLNEEKIIPRNYEIKEG--EGKVWYLDNGASNHMTGNRAFFSELNEK 85
             +          ++++EE++ P+      G   G +W+LDNGASNHMTG+RA F +L+  
Sbjct: 325  LLAVTEDEPASGLVVHEERVWPQLLLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVS 384

Query: 84   IKGKVKFGDGSCIDIGGKGSILFQSK 7
            I G VKFGD S + I GKGSILF  K
Sbjct: 385  ITGSVKFGDASTVKIQGKGSILFSCK 410


>ref|XP_004171846.1| PREDICTED: uncharacterized protein LOC101226793 [Cucumis sativus]
          Length = 407

 Score =  217 bits (552), Expect = 8e-54
 Identities = 140/387 (36%), Positives = 210/387 (54%), Gaps = 32/387 (8%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEP--GSE-DVDKNNIAIGLLFQAMPEALTLQVG 898
            ML   NYTVW ++ + +L    V++ IEP  G+E DV K+  A   + Q +PE + LQ+ 
Sbjct: 7    MLTPHNYTVWTIKAEAILNAQGVWEAIEPARGAEVDVKKDKKARAYILQCIPEDVLLQIA 66

Query: 897  DQESPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSS 718
             +++ K IWD++K+R+ G++RVK AR+QTL SEF  ++MK+ +TID F GK+S +ASK +
Sbjct: 67   KKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETIDEFVGKISGLASKFT 126

Query: 717  SLGRKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVK-E 541
            +L   +E++ LV K L+S+P  K++ I+  ++Q  DL    FE+ +GR+KAYEER  +  
Sbjct: 127  TLRVALEDSSLVNKLLDSVP-DKYLPIVVGIKQFQDLETMPFEEAIGRMKAYEERTTRFR 185

Query: 540  ETTAETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDR---------SPNQNN 388
            E    T  +LL  +     +                  RF+  DR         +  QN+
Sbjct: 186  ENNNNTDGQLLLTHA---EWKARQKGHSGDNSSMNKGRRFSGIDRGRWRGCGRGTERQNS 242

Query: 387  ----HSQAKEKKDKTKVICYRCDKPGHYASSCPERTQRMHEANKTETEEADAALYM---- 232
                 +     +DK+ + C+ C+K GHYA     +     E++ T   E +  L M    
Sbjct: 243  AGGTSNTGNGTRDKSHIKCFTCNKMGHYALEYRGKGHD-EESHLTCVVEEEPTLMMAMSQ 301

Query: 231  ---------HEVVLLNEEKIIPRNY-EIKEGEGK-VWYLDNGASNHMTGNRAFFSELNEK 85
                      + +LLN+E+++P  Y   K GE   VWYLDNGASNHM G+R  F EL+E 
Sbjct: 302  EGTRTRCDQEDAILLNKERLLPEMYCNDKNGENNDVWYLDNGASNHMIGHREKFQELDES 361

Query: 84   IKGKVKFGDGSCIDIGGKGSILFQSKT 4
              GKVKFGDGS I I  K      ++T
Sbjct: 362  FTGKVKFGDGSTIQIMEKEQSCSSART 388


>gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1150

 Score =  205 bits (522), Expect = 2e-50
 Identities = 105/183 (57%), Positives = 144/183 (78%), Gaps = 2/183 (1%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSE--DVDKNNIAIGLLFQAMPEALTLQVGD 895
            MLN  NYTVWAMRMK  LK++  ++ I+  +E  D DK+++A  LLFQ++PEAL LQ+G+
Sbjct: 24   MLNAINYTVWAMRMKRALKVHKAWNMIDKVTEPFDEDKSDVACALLFQSIPEALALQIGE 83

Query: 894  QESPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSS 715
             ++ + +WDAIKSRH G +RVK+ARLQTLM+EF+R+ MKDS+ I  F+GKLSEI++KS++
Sbjct: 84   LDTAREVWDAIKSRHLGVERVKDARLQTLMAEFDRLTMKDSEKIYDFAGKLSEISAKSAA 143

Query: 714  LGRKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEET 535
            LG  IEE++LVKKFL S+PR K+I I+A+LEQVLDLN  +F+DIVGRLK   +R  K  +
Sbjct: 144  LGVIIEESRLVKKFLKSVPRRKYIHIVAALEQVLDLNTITFDDIVGRLKKPYDRGYKVFS 203

Query: 534  TAE 526
            T +
Sbjct: 204  TLD 206


>ref|XP_002488942.1| hypothetical protein SORBIDRAFT_1475s002010 [Sorghum bicolor]
            gi|241947152|gb|EES20297.1| hypothetical protein
            SORBIDRAFT_1475s002010 [Sorghum bicolor]
          Length = 447

 Score =  200 bits (509), Expect = 7e-49
 Identities = 125/371 (33%), Positives = 195/371 (52%), Gaps = 38/371 (10%)
 Frame = -3

Query: 1065 LNDSNYTVWAMRMKVMLKIYHVYDTIEPG-----------SEDVDKNNIAIGLLFQAMPE 919
            L  +NY  W++R++ +++   V+D +EP            +E   K+  A   L Q +P+
Sbjct: 23   LTANNYISWSIRVRAIMEDQGVWDVMEPSGSTSAPTAAEAAEAKKKDTKAKAHLLQCLPD 82

Query: 918  ALTLQVGDQESPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLS 739
             L +QV  +++ K +WDA+K+RH GADRVKEARLQTL SEF+ ++MKD +++D + G+L+
Sbjct: 83   DLLMQVAGKKTGKEVWDALKARHVGADRVKEARLQTLKSEFDAMRMKDEESLDQYVGRLT 142

Query: 738  EIASKSSSLGRKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYE 559
             ++ +  +LG  +E+  LVKK  +++P G++I +IA +EQ  DL    FED VGRLKAYE
Sbjct: 143  GMSVRYGNLGGSLEDAALVKKLFDTVP-GRYIHVIAGIEQFYDLQTMKFEDAVGRLKAYE 201

Query: 558  ERIVK--EETTAETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDR------S 403
            ER  +   E  +E    LL    ++     S               R   + R       
Sbjct: 202  ERTRRGVGEGRSEAGQVLLTQAEWEARQRKSTGDGSGGSRSQDGGGRGRGRGRGGGGRGG 261

Query: 402  PNQNNHSQAKEKKDKTKVICYRCDKPGHYASSCP-ERTQRMHEANKTETEEADAALYMHE 226
                  + +  K+DK+ + C++C + GHYA+ CP    ++  EA+       +  + + E
Sbjct: 262  RGGQRDAASTGKRDKSHIKCFKCHQMGHYANRCPGVEKKKEEEAHHVRAAPLEPTVLLVE 321

Query: 225  VVLLN----------------EEKIIPRNYEIKEGEGK--VWYLDNGASNHMTGNRAFFS 100
             V L                 EEK+ P      E E K  VWYLDNGASNHM G+R  F 
Sbjct: 322  TVDLEPPEQAPDQNLFTEVDLEEKVTPELNFTGEEEPKNNVWYLDNGASNHMCGDRLKFR 381

Query: 99   ELNEKIKGKVK 67
            ++N+ + GKV+
Sbjct: 382  DINQTVSGKVQ 392


>dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1250

 Score =  194 bits (493), Expect = 5e-47
 Identities = 126/359 (35%), Positives = 180/359 (50%), Gaps = 3/359 (0%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVDKNNIAIGLLFQAMPEALTLQVGDQE 889
            +L+ +NY VW MRM+++LK++ V+DT+EPGSEDVDKN+IA  L+FQ++PE+LTLQ+G+ E
Sbjct: 25   LLSATNYNVWTMRMRLLLKVHKVWDTVEPGSEDVDKNDIARALIFQSVPESLTLQIGELE 84

Query: 888  SPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTIDSFSGKLSEIASKSSSLG 709
            + K +W++IK+++ GA               ER+K     T+                  
Sbjct: 85   TAKEVWESIKTKNVGA---------------ERVKEARLQTL------------------ 111

Query: 708  RKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDIVGRLKAYEERIVKEETTA 529
                                    +A  E+       + ED  GRL          E T 
Sbjct: 112  ------------------------MAEFERAKMKETDTIEDFAGRLS---------EITT 138

Query: 528  ETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRSPNQNNHSQAKEKKDKTKV 349
            + Q   +YAN   Q+                   RF  + R   +  +   K+++D +KV
Sbjct: 139  KLQH--MYANHDSQS---------QQGRGRGQGDRFYQRGRGRGRFGYQGYKQERDTSKV 187

Query: 348  ICYRCDKPGHYASSCPERTQRMHEANKTE---TEEADAALYMHEVVLLNEEKIIPRNYEI 178
            +CYRCDK GHYASSCP+R  ++ +A + E   T+EA+  L +HEVV LNE+ + P  +E 
Sbjct: 188  VCYRCDKLGHYASSCPDRLLKLQKAKEEEDNDTQEAE-ELMVHEVVYLNEKNVKPSEFET 246

Query: 177  KEGEGKVWYLDNGASNHMTGNRAFFSELNEKIKGKVKFGDGSCIDIGGKGSILFQSKTE 1
                  VWYLDNGASNHM                KV+FGD S IDI GKGS+LF SK +
Sbjct: 247  SSDASNVWYLDNGASNHM----------------KVRFGDDSRIDIKGKGSVLFISKNK 289


>dbj|BAB02660.1| unnamed protein product [Arabidopsis thaliana]
          Length = 221

 Score =  188 bits (478), Expect = 3e-45
 Identities = 96/160 (60%), Positives = 130/160 (81%), Gaps = 1/160 (0%)
 Frame = -3

Query: 954 IAIGLLFQAMPEALTLQVGDQESPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKD 775
           +A GLL Q++PEA TLQVG+ ++ K +WD+IK+RH GA+RVKEAR+QTLM++FE++KMK+
Sbjct: 1   MARGLLVQSIPEAFTLQVGNLQTAKEVWDSIKTRHVGAERVKEARVQTLMADFEKMKMKE 60

Query: 774 SDTIDSFSGKLSEIASKSSSLGRKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTS 595
           ++ ID F+G+LSE+++KS+ LG  IE  KLVKKFLNSLPR K+I IIASLEQVLDLN T+
Sbjct: 61  AEKIDDFAGRLSELSTKSAPLGVNIEVPKLVKKFLNSLPRKKYIHIIASLEQVLDLNNTT 120

Query: 594 FEDIVGRLKAYEERIV-KEETTAETQSKLLYANTYQQNFN 478
           FEDIVG +K  EER+   EE T E Q+KL+Y ++  ++ N
Sbjct: 121 FEDIVGCMKVNEERVYDPEEETNEDQNKLMYTSSDSKSGN 160


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  180 bits (457), Expect = 8e-43
 Identities = 110/385 (28%), Positives = 195/385 (50%), Gaps = 31/385 (8%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVD------------------KNNIAIG 943
            +L  SNY  W++RMK +L  + V++ +E G  + +                  ++  A+ 
Sbjct: 12   VLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALC 71

Query: 942  LLFQAMPEALTLQVGDQESPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTI 763
            L++Q + E    +V +  S K  W+ +++ ++GAD+VK+ RLQTL  EFE ++MK+ + +
Sbjct: 72   LIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELV 131

Query: 762  DSFSGKLSEIASKSSSLGRKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDI 583
              +  ++  + +     G K+++ ++++K L SL   KF  I+  +E+  DL   + E +
Sbjct: 132  SDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDL-KFEHIVTVIEETKDLEAMTIEQL 190

Query: 582  VGRLKAYEERIVKEETTAETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRS 403
            +G L+AYEE+  K+E  AE    L    T ++N  +                  N +   
Sbjct: 191  LGSLQAYEEKKKKKEDIAE--QVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248

Query: 402  PNQNNHSQ-------------AKEKKDKTKVICYRCDKPGHYASSCPERTQRMHEANKTE 262
            P+++N +Q              K + DK+ V CY C K GHYAS C   + +  E     
Sbjct: 249  PHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFE----- 303

Query: 261  TEEADAALYMHEVVLLNEEKIIPRNYEIKEGEGKVWYLDNGASNHMTGNRAFFSELNEKI 82
                + A Y+ E +   +  ++    + ++ E   WYLD+GASNHM G ++ F+EL+E +
Sbjct: 304  ----EKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESV 359

Query: 81   KGKVKFGDGSCIDIGGKGSILFQSK 7
            +G V  GD S +++ GKG+IL + K
Sbjct: 360  RGNVALGDESKMEVKGKGNILIRLK 384


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  179 bits (455), Expect = 1e-42
 Identities = 111/386 (28%), Positives = 193/386 (50%), Gaps = 32/386 (8%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVD------------------KNNIAIG 943
            +L  SNY  W++RMK +L  + V++ +E G  + +                  ++  A+ 
Sbjct: 12   VLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALC 71

Query: 942  LLFQAMPEALTLQVGDQESPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTI 763
            L++Q + E    +V +  S K  W+ +++ ++GAD+VK+ RLQTL  EFE ++MK+ + +
Sbjct: 72   LIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELV 131

Query: 762  DSFSGKLSEIASKSSSLGRKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDI 583
              +  ++  + +     G K+++ ++++K L SL   KF  I+  +E+  DL   + E +
Sbjct: 132  SDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDL-KFEHIVTVIEETKDLEAMTIEQL 190

Query: 582  VGRLKAYEERIVKEETTAETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRS 403
            +G L+AYEE+  K+E   E    L    T ++N  +                  N +   
Sbjct: 191  LGSLQAYEEKKKKKEDIVE--QVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248

Query: 402  PNQNNHSQ-------------AKEKKDKTKVICYRCDKPGHYASSCPERTQRMHEANKTE 262
            P+++N +Q              K + DK+ V CY C K GHYAS C   + +  E     
Sbjct: 249  PHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANY 308

Query: 261  TEEADAALYMHEVVLLNEEKIIPRNYEIKE-GEGKVWYLDNGASNHMTGNRAFFSELNEK 85
             EE           +  E+ ++  +Y+  E  E   WYLD+GASNHM G ++ F+EL+E 
Sbjct: 309  VEEK----------IQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDES 358

Query: 84   IKGKVKFGDGSCIDIGGKGSILFQSK 7
            ++G V  GD S +++ GKG+IL + K
Sbjct: 359  VRGNVALGDESKMEVKGKGNILIRLK 384


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  179 bits (455), Expect = 1e-42
 Identities = 111/386 (28%), Positives = 193/386 (50%), Gaps = 32/386 (8%)
 Frame = -3

Query: 1068 MLNDSNYTVWAMRMKVMLKIYHVYDTIEPGSEDVD------------------KNNIAIG 943
            +L  SNY  W++RMK +L  + V++ +E G  + +                  ++  A+ 
Sbjct: 12   VLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALC 71

Query: 942  LLFQAMPEALTLQVGDQESPKGIWDAIKSRHQGADRVKEARLQTLMSEFERIKMKDSDTI 763
            L++Q + E    +V +  S K  W+ +++ ++GAD+VK+ RLQTL  EFE ++MK+ + +
Sbjct: 72   LIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELV 131

Query: 762  DSFSGKLSEIASKSSSLGRKIEETKLVKKFLNSLPRGKFIQIIASLEQVLDLNKTSFEDI 583
              +  ++  + +     G K+++ ++++K L SL   KF  I+  +E+  DL   + E +
Sbjct: 132  SDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDL-KFEHIVTVIEETKDLEAMTIEQL 190

Query: 582  VGRLKAYEERIVKEETTAETQSKLLYANTYQQNFNTSXXXXXXXXXXXXXXXRFNSQDRS 403
            +G L+AYEE+  K+E   E    L    T ++N  +                  N +   
Sbjct: 191  LGSLQAYEEKKKKKEDIVE--QVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248

Query: 402  PNQNNHSQ-------------AKEKKDKTKVICYRCDKPGHYASSCPERTQRMHEANKTE 262
            P+++N +Q              K + DK+ V CY C K GHYAS C   + +  E     
Sbjct: 249  PHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANY 308

Query: 261  TEEADAALYMHEVVLLNEEKIIPRNYEIKE-GEGKVWYLDNGASNHMTGNRAFFSELNEK 85
             EE           +  E+ ++  +Y+  E  E   WYLD+GASNHM G ++ F+EL+E 
Sbjct: 309  VEEK----------IQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDES 358

Query: 84   IKGKVKFGDGSCIDIGGKGSILFQSK 7
            ++G V  GD S +++ GKG+IL + K
Sbjct: 359  VRGNVALGDESKMEVKGKGNILIRLK 384