BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00019835
         (787 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    84   3e-31
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                83   5e-31
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    84   1e-30
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                84   1e-30
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    78   5e-29
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    77   2e-28
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    89   2e-28
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              92   3e-28
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 76   4e-28
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...    80   2e-26
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    82   3e-26
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    85   5e-26
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            85   5e-26
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    80   6e-26
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    78   7e-26
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        83   8e-26
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    85   2e-25
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   3e-24
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    91   8e-24
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   93   9e-23

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 84.0 bits (206), Expect(2) = 3e-31
 Identities = 40/88 (45%), Positives = 55/88 (62%)
 Frame = +1

Query: 523 PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNA 702
           P  FI+ I  C+TT  FS+ +NG L  Y +S RGL QG  + PYL ++ M+VLS++L+ A
Sbjct: 622 PREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKA 681

Query: 703 MINSEFKFHKWCSQVQLNHLYFADDIMV 786
                F +H  C  + L HL FADD+MV
Sbjct: 682 AAARHFGYHPKCKTMGLTHLSFADDLMV 709



 Score = 78.6 bits (192), Expect(2) = 3e-31
 Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
 Frame = +3

Query: 66  NDRAPGHDGYSAKFFMEAWTIVGHDVTRA--TLFSDLGICRGN*IPLASRSLQKVRAHYH 239
           +D++PG DGY+++FF   W I+G + T A  + F+   + +G    + +   +K  A   
Sbjct: 467 SDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREM 526

Query: 240 GGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLRNYH 419
              +      +LYK ISKI+  R K  L  FI+  ++AF+K   + +N+LLA +L+++YH
Sbjct: 527 KDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYH 586

Query: 420 RDDGPPRCTIKL 455
           +D    RC IK+
Sbjct: 587 KDTISTRCAIKI 598


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 82.8 bits (203), Expect(2) = 5e-31
 Identities = 38/88 (43%), Positives = 56/88 (63%)
 Frame = +1

Query: 523 PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNA 702
           P  FI+ I  C+TTP FS+ +NG L  + +S RGL QG  + PYL ++ M+VLS+LL+  
Sbjct: 175 PEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKV 234

Query: 703 MINSEFKFHKWCSQVQLNHLYFADDIMV 786
           +      +H  C ++ L HL FADD+M+
Sbjct: 235 VGIGRIGYHPHCKRMGLTHLSFADDLMI 262



 Score = 79.0 bits (193), Expect(2) = 5e-31
 Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
 Frame = +3

Query: 57  SVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRATL-FSDLGIC-RGN*IPLASRSLQKVRA 230
           S+ ND++PG DG++++FF E+W I+G +   A   F  LG   +G    + +   +K+ +
Sbjct: 17  SMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLES 76

Query: 231 HYHGGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLR 410
                 +      ++YK ISKIL  R K  L  FI+  +++F+K   + +N+LLA DL++
Sbjct: 77  KEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVK 136

Query: 411 NYHRDDGPPRCTIKL 455
           +YH+D    RC IK+
Sbjct: 137 DYHKDSISERCAIKI 151


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 84.3 bits (207), Expect(2) = 1e-30
 Identities = 40/88 (45%), Positives = 55/88 (62%)
 Frame = +1

Query: 523 PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNA 702
           P  FI+ I  C++T  FS+ +NG L  Y  S RGL QG  + PYL ++ M+VLSR+L+ A
Sbjct: 343 PGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKA 402

Query: 703 MINSEFKFHKWCSQVQLNHLYFADDIMV 786
               EF +H  C  + L HL FADD+M+
Sbjct: 403 AGAREFGYHPRCKTLGLTHLCFADDLMI 430



 Score = 75.9 bits (185), Expect(2) = 1e-30
 Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
 Frame = +3

Query: 57  SVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRA--TLFSDLGICRGN*IPLASRSLQKVRA 230
           S+  D++PG DGY+++F+  +W I+G +V  A  + F+   + +G    + +   +K  A
Sbjct: 185 SMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEA 244

Query: 231 HYHGGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLR 410
                 +      +LYK ISKIL  R K  L  FI   ++AF+K   + +N+LLA +L++
Sbjct: 245 REIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVK 304

Query: 411 NYHRDDGPPRCTIKL 455
           +YH+D    RC +K+
Sbjct: 305 DYHKDSISTRCAMKI 319


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 84.0 bits (206), Expect(2) = 1e-30
 Identities = 41/85 (48%), Positives = 57/85 (67%)
 Frame = +1

Query: 532 FINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNAMIN 711
           FI+ I  C+TT  FS+ +NG LV Y +S RGL QG  + PYL ++ M+VLS++L+ A   
Sbjct: 272 FIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGV 331

Query: 712 SEFKFHKWCSQVQLNHLYFADDIMV 786
            +F FH  C ++ L HL FADD+MV
Sbjct: 332 RKFGFHPKCQRLGLTHLSFADDLMV 356



 Score = 76.3 bits (186), Expect(2) = 1e-30
 Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
 Frame = +3

Query: 57  SVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRA--TLFSDLGICRGN*IPLASRSLQKVRA 230
           S+  D++PG DGY+++F+   W I+G + T    + F    + +G    + +   +K+ A
Sbjct: 111 SMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAA 170

Query: 231 HYHGGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLR 410
                 +      +LYK ISKI+  R K  L  FI+  ++AF+K   + +N+LLA +L++
Sbjct: 171 KEMRDYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVK 230

Query: 411 NYHRDDGPPRCTIKL 455
           +YH+D    RC IK+
Sbjct: 231 DYHKDSISARCAIKI 245


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 77.8 bits (190), Expect(2) = 5e-29
 Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
 Frame = +3

Query: 57  SVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRA--TLFSDLGICRGN*IPLASRSLQKVRA 230
           S+ ND++PG DGY+A+F+  AW I+G +   A  + F+   + +G    + +   +K  A
Sbjct: 352 SMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEA 411

Query: 231 HYHGGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLR 410
                 +      +LYK ISKI+  R K  L  FI   ++AF+K   + +N+LLA ++++
Sbjct: 412 KEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVK 471

Query: 411 NYHRDDGPPRCTIKL 455
           +YH+D    RC +K+
Sbjct: 472 DYHKDSVSSRCALKI 486



 Score = 77.4 bits (189), Expect(2) = 5e-29
 Identities = 36/88 (40%), Positives = 53/88 (60%)
 Frame = +1

Query: 523 PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNA 702
           P  F + I  C+TT  FS+ +NG L     S R L QG  + PYL ++ M+VLS++L+ A
Sbjct: 510 PPEFTHWITLCITTASFSVQVNGELAGVFSSARELRQGCSLSPYLFVISMDVLSKMLDKA 569

Query: 703 MINSEFKFHKWCSQVQLNHLYFADDIMV 786
           +   +F +H  C  + L HL FADD+M+
Sbjct: 570 VGARQFGYHPKCRAIGLTHLSFADDLMI 597


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 77.4 bits (189), Expect(2) = 2e-28
 Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
 Frame = +3

Query: 66   NDRAPGHDGYSAKFFMEAWTIVGHDVTRA--TLFSDLGICRGN*IPLASRSLQKVRAHYH 239
            N+++PG DGY+++FF   W++ G D   A  + F    + +G    + +   +K  A   
Sbjct: 764  NNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEM 823

Query: 240  GGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLRNYH 419
               +      +LYK ISKIL  R K  L +FI   ++AF+K+  + +N+LLA +L+++YH
Sbjct: 824  KDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYH 883

Query: 420  RDDGPPRCTIKL 455
            ++   PRC +K+
Sbjct: 884  KESVTPRCAMKI 895



 Score = 75.9 bits (185), Expect(2) = 2e-28
 Identities = 35/88 (39%), Positives = 53/88 (60%)
 Frame = +1

Query: 523  PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNA 702
            P  F + I  C++T  FS+ +NG L  +  S RGL QG  + PYL ++ M VLS +++ A
Sbjct: 919  PETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEA 978

Query: 703  MINSEFKFHKWCSQVQLNHLYFADDIMV 786
             ++    +H  C ++ L HL FADD+MV
Sbjct: 979  AVHRNIGYHPKCEKIGLTHLCFADDLMV 1006


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 88.6 bits (218), Expect(2) = 2e-28
 Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
 Frame = +3

Query: 57   SVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRA--TLFSDLGICRGN*IPLASRSLQKVRA 230
            S+  +++PG DGY+ +FF E W+++G +VT A  + F+   + +G    + +   ++  A
Sbjct: 730  SIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYA 789

Query: 231  HYHGGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLR 410
                  +      +LYK ISK+L  R KC L  FI+P ++AF+    + +N+LLA +L++
Sbjct: 790  KEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVK 849

Query: 411  NYHRDDGPPRCTIKLIL 461
            +YH+D   PRC +K+ L
Sbjct: 850  DYHKDGLSPRCAMKIDL 866



 Score = 64.7 bits (156), Expect(2) = 2e-28
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = +1

Query: 520  VPVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNN 699
            +P  FI+ I  C++T  FS+ +NG           L QG  + PYL ++ M VLS +L+ 
Sbjct: 887  IPEKFIHWINLCISTASFSVQVNG-----------LRQGCSLSPYLFVICMNVLSAMLDK 935

Query: 700  AMINSEFKFHKWCSQVQLNHLYFADDIMV 786
              +   F +H  C  + L HL FADDIMV
Sbjct: 936  GAVEKRFGYHPRCRNMGLTHLCFADDIMV 964


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 91.7 bits (226), Expect(3) = 3e-28
 Identities = 41/88 (46%), Positives = 60/88 (68%)
 Frame = +1

Query: 523 PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNA 702
           P+ F++ IM C++T  FS+ +NG LV + +S RGL QG  + PYL +M M+VLS+LL+ A
Sbjct: 149 PMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQA 208

Query: 703 MINSEFKFHKWCSQVQLNHLYFADDIMV 786
               +F +H  C ++ L HL FADD+MV
Sbjct: 209 ASAKKFGYHSRCKELSLTHLSFADDLMV 236



 Score = 55.1 bits (131), Expect(3) = 3e-28
 Identities = 25/62 (40%), Positives = 41/62 (66%)
 Frame = +3

Query: 270 LLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLRNYHRDDGPPRCTI 449
           ++YK ISKI+  R K  L  FI+  + AF+K   + +N+LLA +L+++YH++    RC I
Sbjct: 64  VIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKESVSSRCAI 123

Query: 450 KL 455
           K+
Sbjct: 124 KI 125



 Score = 26.2 bits (56), Expect(3) = 3e-28
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 449 QIDFMKAFDTINGEFIRYIMIAIGF 523
           +ID  KAF+++   FIR I++++ F
Sbjct: 124 KIDISKAFNSVQWSFIRNILLSMDF 148


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 76.3 bits (186), Expect(2) = 4e-28
 Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
 Frame = +3

Query: 66  NDRAPGHDGYSAKFFMEAWTIVGHDVTRA--TLFSDLGICRGN*IPLASRSLQKVRAHYH 239
           +++ PG DGY+++FF   W+I G D   A  + F    + +G    + +   +K  A   
Sbjct: 40  SNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLM 99

Query: 240 GGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLRNYH 419
              +      ++YK ISKI+  R K  L TFI   ++AF+++  + +N+LLA +L+++YH
Sbjct: 100 RDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYH 159

Query: 420 RDDGPPRCTIKL 455
           +D   PRC +K+
Sbjct: 160 KDSISPRCAMKI 171



 Score = 75.9 bits (185), Expect(2) = 4e-28
 Identities = 35/88 (39%), Positives = 54/88 (61%)
 Frame = +1

Query: 523 PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNA 702
           P +F + I  C++T  FS+ +NG L  +  S RGL QG  + PYL ++ M VLS +++ A
Sbjct: 195 PENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVA 254

Query: 703 MINSEFKFHKWCSQVQLNHLYFADDIMV 786
            ++    +H  C ++ L HL FADD+MV
Sbjct: 255 AVHRNIGYHPKCKKLSLTHLCFADDLMV 282


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
           thaliana]
          Length = 1253

 Score = 80.1 bits (196), Expect(3) = 2e-26
 Identities = 37/89 (41%), Positives = 56/89 (62%)
 Frame = +1

Query: 520 VPVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNN 699
           +P  F+  I  C++TP FS+ +NG+   + +S RGL QG+P+ P+L ++ MEV S LLN+
Sbjct: 568 IPDRFVYWITQCISTPTFSVCVNGNTGGFFKSTRGLRQGNPLSPFLFVLAMEVFSSLLNS 627

Query: 700 AMINSEFKFHKWCSQVQLNHLYFADDIMV 786
                   +H   S + ++HL FADDIMV
Sbjct: 628 RFQAGYIHYHPKTSPLSISHLMFADDIMV 656



 Score = 61.6 bits (148), Expect(3) = 2e-26
 Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
 Frame = +3

Query: 57  SVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRAT---LFSDLGICRGN*IPLASRSLQKVR 227
           S  +++  G DG+  +FF E W+++G +VT A      S + + + N   L         
Sbjct: 407 SFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLVLIPKITNA 466

Query: 228 AHYHGGLQAHCLLY---LLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQ 398
           +  +      C  +    LYK I+++L  R +C L   ISP ++AFL    +++N+LLA 
Sbjct: 467 SKMNDFRPISCNDFGPITLYKVIARLLTNRLQCLLSQVISPFQSAFLPGRFLAENVLLAT 526

Query: 399 DLLRNYHRDDGPPRCTIKLIL 461
           +L++ Y+R +  PR  +K+ L
Sbjct: 527 ELVQGYNRQNIDPRGMLKVDL 547



 Score = 24.6 bits (52), Expect(3) = 2e-26
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 449 QIDFMKAFDTINGEFIRYIMIAIG 520
           ++D  KAFD+I  +FI   + AIG
Sbjct: 544 KVDLRKAFDSIRWDFIISALKAIG 567


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 81.6 bits (200), Expect(2) = 3e-26
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
 Frame = +1

Query: 490 VYKVYHDCHWV-----------PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQG 636
           + K Y    WV           P  FI  IMACV T  +S+ +NG      ++ +GL QG
Sbjct: 588 IRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQG 647

Query: 637 DPILPYL*IMGMEVLSRLLNNAMINSEFKFHKWCSQVQLNHLYFADDIMV 786
           DP+ P+L  + ME LSR + N   + EF FH  C +++L HL FADD+++
Sbjct: 648 DPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLM 697



 Score = 64.3 bits (155), Expect(2) = 3e-26
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
 Frame = +3

Query: 54  SSVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRATL-FSDLGICRGN*IPLASRSLQKVRA 230
           + + + +APG DG+++ FF ++W ++  ++    L F + G         A   + K+  
Sbjct: 451 ADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDE 510

Query: 231 HYHG-GLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLL 407
             H    +       LYK ISKIL  R +  +   +   +  F+ +  I DNILLA +L+
Sbjct: 511 AKHAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELI 570

Query: 408 RNYHRDDGPPRCTIKL 455
           R Y+R    PRC IK+
Sbjct: 571 RGYNRRHVSPRCVIKV 586


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 84.7 bits (208), Expect(3) = 5e-26
 Identities = 36/89 (40%), Positives = 57/89 (64%)
 Frame = +1

Query: 520 VPVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNN 699
           +P  +IN I  C+TTP F++S+NG+   +  S +GL QGDP+ PYL ++ MEV S+LL +
Sbjct: 475 IPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYS 534

Query: 700 AMINSEFKFHKWCSQVQLNHLYFADDIMV 786
              +    +H     + ++HL FADD+M+
Sbjct: 535 RYDSGYIHYHPKAGDLSISHLMFADDVMI 563



 Score = 57.8 bits (138), Expect(3) = 5e-26
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
 Frame = +3

Query: 57  SVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRATL-FSDLGICRGN*IPLASRSLQKV-RA 230
           S+  ++  G DGYS +FF + W+I+G +V  A   F D G             + K   A
Sbjct: 318 SLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNA 377

Query: 231 HYHGGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLR 410
                 +    L  LYK ISK+L  R +  L   I  +++AFL   ++++N+LLA +++ 
Sbjct: 378 CTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVH 437

Query: 411 NYHRDDGPPRCTIKLIL 461
            Y+R +  PR  +K+ L
Sbjct: 438 GYNRLNISPRGMLKVDL 454



 Score = 22.7 bits (47), Expect(3) = 5e-26
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 449 QIDFMKAFDTINGEFIRYIMIAI 517
           ++D  KAFD++  EF+   + A+
Sbjct: 451 KVDLKKAFDSVKWEFVTAALRAL 473


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 84.7 bits (208), Expect(3) = 5e-26
 Identities = 36/89 (40%), Positives = 57/89 (64%)
 Frame = +1

Query: 520 VPVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNN 699
           +P  +IN I  C+TTP F++S+NG+   +  S +GL QGDP+ PYL ++ MEV S+LL +
Sbjct: 475 IPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYS 534

Query: 700 AMINSEFKFHKWCSQVQLNHLYFADDIMV 786
              +    +H     + ++HL FADD+M+
Sbjct: 535 RYDSGYIHYHPKAGDLSISHLMFADDVMI 563



 Score = 57.8 bits (138), Expect(3) = 5e-26
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
 Frame = +3

Query: 57  SVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRATL-FSDLGICRGN*IPLASRSLQKV-RA 230
           S+  ++  G DGYS +FF + W+I+G +V  A   F D G             + K   A
Sbjct: 318 SLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNA 377

Query: 231 HYHGGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLR 410
                 +    L  LYK ISK+L  R +  L   I  +++AFL   ++++N+LLA +++ 
Sbjct: 378 CTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVH 437

Query: 411 NYHRDDGPPRCTIKLIL 461
            Y+R +  PR  +K+ L
Sbjct: 438 GYNRLNISPRGMLKVDL 454



 Score = 22.7 bits (47), Expect(3) = 5e-26
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 449 QIDFMKAFDTINGEFIRYIMIAI 517
           ++D  KAFD++  EF+   + A+
Sbjct: 451 KVDLKKAFDSVKWEFVTAALRAL 473


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 80.5 bits (197), Expect(3) = 6e-26
 Identities = 41/88 (46%), Positives = 54/88 (61%)
 Frame = +1

Query: 523 PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNA 702
           P  F++ IM CVTT  FS+ +N  L  Y  S RGL QG  + PYL ++ M+VLS+ L+ A
Sbjct: 140 PQEFVHWIMLCVTTASFSVQVNRELAGYFNSLRGLRQGCSLTPYLFVIVMDVLSKKLDRA 199

Query: 703 MINSEFKFHKWCSQVQLNHLYFADDIMV 786
               +F +H  C  + L HL FADDIMV
Sbjct: 200 AGLRKFGYHPKCKNLGLTHLSFADDIMV 227



 Score = 57.4 bits (137), Expect(3) = 6e-26
 Identities = 27/62 (43%), Positives = 42/62 (67%)
 Frame = +3

Query: 270 LLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLRNYHRDDGPPRCTI 449
           +LYK ISKI+  R K  L  FI+  ++AF+K   + +N+LLA +L+++YH+D    RC I
Sbjct: 55  VLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDYHKDSVSERCAI 114

Query: 450 KL 455
           K+
Sbjct: 115 KI 116



 Score = 26.9 bits (58), Expect(3) = 6e-26
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 449 QIDFMKAFDTINGEFIRYIMIAIGF 523
           +ID  KAFD++   F+R +++ + F
Sbjct: 115 KIDISKAFDSVQWSFLRNVLLTLDF 139


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 77.8 bits (190), Expect(2) = 7e-26
 Identities = 38/89 (42%), Positives = 53/89 (59%)
 Frame = +1

Query: 520  VPVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNN 699
            +P  FI+ I  C+ T  FS+ +NG L  +  S RGL QG  + PYL ++ M VLS +L+ 
Sbjct: 768  LPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDK 827

Query: 700  AMINSEFKFHKWCSQVQLNHLYFADDIMV 786
            A +  +  +H  C  + L HL FADDIMV
Sbjct: 828  AAVEKKISYHPRCRNMNLTHLCFADDIMV 856



 Score = 66.6 bits (161), Expect(2) = 7e-26
 Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
 Frame = +3

Query: 21   GRLLMMKSRMHSSVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRA--TLFSDLGICRGN*I 194
            GR+      +    H  ++PG DGY+ +FF  AW ++G D+  A  + F    + +G   
Sbjct: 601  GRVCTSHDDIKEEAH--KSPGPDGYTVEFFKTAWPVLGRDLVIAIQSFFLKGFLPKGINT 658

Query: 195  PLASRSLQKVRAHYHGGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTI 374
             + +   +K         +      +LYK +SK++  R K  L   I+P ++AF+K   +
Sbjct: 659  TILALISKKHEVSGMKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLM 718

Query: 375  SDNILLAQDLLRNYHRDDGPPRCTIKL 455
             +N+LLA +L+++YH++    R  +K+
Sbjct: 719  MENLLLASELVKDYHKESISSRSALKI 745


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 83.2 bits (204), Expect(3) = 8e-26
 Identities = 37/89 (41%), Positives = 57/89 (64%)
 Frame = +1

Query: 520 VPVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNN 699
           +P  FIN I  C++TP F++SING    + +S +GL QGDP+ PYL ++ ME  S LL++
Sbjct: 615 IPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHS 674

Query: 700 AMINSEFKFHKWCSQVQLNHLYFADDIMV 786
              +    +H   S + ++HL FADD+M+
Sbjct: 675 RYESGLIHYHPKASNLSISHLMFADDVMI 703



 Score = 58.9 bits (141), Expect(3) = 8e-26
 Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 2/137 (1%)
 Frame = +3

Query: 57  SVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRAT--LFSDLGICRGN*IPLASRSLQKVRA 230
           S+  +++ G DG++A+FF+++W+IVG +VT A    FS   + +           + V  
Sbjct: 458 SLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNP 517

Query: 231 HYHGGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLR 410
                 +    L  LYK I+++L  R +  L   IS  ++AFL   ++++N+LLA DL+ 
Sbjct: 518 TCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVH 577

Query: 411 NYHRDDGPPRCTIKLIL 461
            Y+  +  PR  +K+ L
Sbjct: 578 GYNWSNISPRGMLKVDL 594



 Score = 22.3 bits (46), Expect(3) = 8e-26
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 449 QIDFMKAFDTINGEFI 496
           ++D  KAFD++  EF+
Sbjct: 591 KVDLKKAFDSVRWEFV 606


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 85.1 bits (209), Expect(2) = 2e-25
 Identities = 37/88 (42%), Positives = 58/88 (65%)
 Frame = +1

Query: 523 PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNA 702
           P  F+N I  C+T+  FS++++GSL  Y +  +GL QGDP+ P L ++ ME+LSRLL N 
Sbjct: 615 PPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENK 674

Query: 703 MINSEFKFHKWCSQVQLNHLYFADDIMV 786
             +    +H   S+V+++ L FADD+M+
Sbjct: 675 FSDGSIGYHPKASEVRISSLAFADDLMI 702



 Score = 57.8 bits (138), Expect(2) = 2e-25
 Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
 Frame = +3

Query: 66  NDRAPGHDGYSAKFFMEAWTIVGHDVTRATL-FSDLGICRGN*IPLASRSL-QKVRAHYH 239
           ++++PG DGY+++FF + W+IVG  +  A   F   G   G     A   + +K  A   
Sbjct: 460 SNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRI 519

Query: 240 GGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLRNYH 419
              +       +YK ISK+L  R +  L  +ISP+++AF+K   +++N+LLA +L++ + 
Sbjct: 520 TEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFG 579

Query: 420 RDDGPPRCTIKLIL 461
           + +   R  +K+ L
Sbjct: 580 QANISSRGVLKVDL 593


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 74.7 bits (182), Expect(3) = 3e-24
 Identities = 34/88 (38%), Positives = 53/88 (60%)
 Frame = +1

Query: 523 PVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNNA 702
           P  F+  IM CV+T  +S+ +NG      ++ +GL QGDP+ P+L  + ME LSR L   
Sbjct: 607 PSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEEL 666

Query: 703 MINSEFKFHKWCSQVQLNHLYFADDIMV 786
             + +F FH  C ++ + HL FADD+++
Sbjct: 667 KGSPDFNFHPKCERLNITHLMFADDLLM 694



 Score = 60.8 bits (146), Expect(3) = 3e-24
 Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
 Frame = +3

Query: 54  SSVHNDRAPGHDGYSAKFFMEAWTIVGHDVTRAT--LFSDLGICRGN*IPLASRSLQKVR 227
           + + ND+APG DG++A FF ++W  +  ++       F++  + R     + +   +   
Sbjct: 448 AGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQH 507

Query: 228 AHYHGGLQAHCLLYLLYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLL 407
           A      +      ++YK ISK+L  R K  +   ++  ++ F+    I+DNILLA +L+
Sbjct: 508 ATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELI 567

Query: 408 RNYHRDDGPPRCTIKL 455
           R Y R    PRC +K+
Sbjct: 568 RGYTRKHMSPRCIMKV 583



 Score = 23.5 bits (49), Expect(3) = 3e-24
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 449 QIDFMKAFDTINGEFIRYIMIAIGF 523
           ++D  KA+D++   F+  ++   GF
Sbjct: 582 KVDIRKAYDSVEWSFLETLLYEFGF 606


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 90.9 bits (224), Expect(3) = 8e-24
 Identities = 39/89 (43%), Positives = 60/89 (67%)
 Frame = +1

Query: 520 VPVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNN 699
           VP  FIN I  C++TP F++S+NG    + +S +GL QGDP+ PYL ++ MEV S+LLN+
Sbjct: 593 VPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGLRQGDPLSPYLFVLAMEVFSKLLNS 652

Query: 700 AMINSEFKFHKWCSQVQLNHLYFADDIMV 786
              +   ++H   S + ++HL FADD+M+
Sbjct: 653 RFDSGYIRYHPKASDLSISHLMFADDVMI 681



 Score = 40.0 bits (92), Expect(3) = 8e-24
 Identities = 18/49 (36%), Positives = 33/49 (67%)
 Frame = +3

Query: 273 LYKCISKILVGRPKCFLETFISPTKNAFLKKCTISDNILLAQDLLRNYH 419
           LYK I+++L  R +  L   ISP+++AFL    +++N+LLA +++  Y+
Sbjct: 510 LYKVIARLLTDRLQKLLSCVISPSQSAFLPGRLLAENVLLATEMVHGYN 558



 Score = 26.6 bits (57), Expect(3) = 8e-24
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 449 QIDFMKAFDTINGEFIRYIMIAIG 520
           ++D  KAFD++  EFI   ++A+G
Sbjct: 569 KVDLRKAFDSVRWEFIIAALLALG 592


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 93.2 bits (230), Expect(3) = 9e-23
 Identities = 44/89 (49%), Positives = 55/89 (61%)
 Frame = +1

Query: 520 VPVHFINCIMACVTTPKFSLSINGSLVDYIESGRGLHQGDPILPYL*IMGMEVLSRLLNN 699
           +P  F+  +  C+ TPKFS+SING L  Y +  RGL QGDP+ PYL IM MEVLSR+L+ 
Sbjct: 68  LPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLDR 127

Query: 700 AMINSEFKFHKWCSQVQLNHLYFADDIMV 786
               S    H  C    + HL FADDIM+
Sbjct: 128 CAAESRLSLHPKCHSPVITHLAFADDIMI 156



 Score = 32.3 bits (72), Expect(3) = 9e-23
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 336 SPTKNAFLKKCTISDNILLAQDLLRNYHRDDGPPRCTIKLIL 461
           SP + AFL+   + +N+LLA +L+  Y+R +   R  +K+ L
Sbjct: 6   SPNQGAFLEGRLMVENVLLATELVHEYNRPNTSKRAMLKIDL 47



 Score = 28.5 bits (62), Expect(3) = 9e-23
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 449 QIDFMKAFDTINGEFIRYIMIAI 517
           +ID  KAFDT++ EFI  IM A+
Sbjct: 44  KIDLRKAFDTVSWEFITKIMQAL 66