BLASTX nr result

ID: Paeonia24_contig00019474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00019474
         (495 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256...    64   3e-08
ref|XP_007025336.1| Rho termination factor, putative isoform 2 [...    59   9e-07
ref|XP_007025335.1| Rho termination factor, putative isoform 1 [...    59   9e-07
ref|XP_007213473.1| hypothetical protein PRUPE_ppa023922mg, part...    59   9e-07
ref|XP_002316817.2| hypothetical protein POPTR_0011s07070g [Popu...    58   1e-06

>ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256599 [Vitis vinifera]
           gi|297740528|emb|CBI30710.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/57 (66%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
 Frame = -3

Query: 490 KLTRPPSNFVKRSPIPHPTSVR-REVDLKDE----GLSGNELIRVEEMKVTELKELA 335
           K  RPPSNFVKRSPIP PT+ R + V LK+E      S NEL +VEEMKVTELKELA
Sbjct: 184 KSARPPSNFVKRSPIPSPTNPRGKAVKLKNEVSVRTTSFNELPKVEEMKVTELKELA 240


>ref|XP_007025336.1| Rho termination factor, putative isoform 2 [Theobroma cacao]
           gi|508780702|gb|EOY27958.1| Rho termination factor,
           putative isoform 2 [Theobroma cacao]
          Length = 257

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 7/60 (11%)
 Frame = -3

Query: 493 FKLTRPPSNFVKRSPIPHPTSVR-------REVDLKDEGLSGNELIRVEEMKVTELKELA 335
           FKL RPPSNFVKRSP+P+PT+ R        EV   +EGL   +L  +E++K+TELK+LA
Sbjct: 179 FKLLRPPSNFVKRSPVPYPTAPRVKGLEQNNEVVATNEGL---KLANIEKLKLTELKDLA 235


>ref|XP_007025335.1| Rho termination factor, putative isoform 1 [Theobroma cacao]
           gi|508780701|gb|EOY27957.1| Rho termination factor,
           putative isoform 1 [Theobroma cacao]
          Length = 345

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 7/60 (11%)
 Frame = -3

Query: 493 FKLTRPPSNFVKRSPIPHPTSVR-------REVDLKDEGLSGNELIRVEEMKVTELKELA 335
           FKL RPPSNFVKRSP+P+PT+ R        EV   +EGL   +L  +E++K+TELK+LA
Sbjct: 267 FKLLRPPSNFVKRSPVPYPTAPRVKGLEQNNEVVATNEGL---KLANIEKLKLTELKDLA 323


>ref|XP_007213473.1| hypothetical protein PRUPE_ppa023922mg, partial [Prunus persica]
           gi|462409338|gb|EMJ14672.1| hypothetical protein
           PRUPE_ppa023922mg, partial [Prunus persica]
          Length = 160

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/53 (58%), Positives = 37/53 (69%)
 Frame = -3

Query: 493 FKLTRPPSNFVKRSPIPHPTSVRREVDLKDEGLSGNELIRVEEMKVTELKELA 335
           FKLTRPPS FVKRSPIP  +  R +V   + G S +   R+EEMK+ ELKELA
Sbjct: 86  FKLTRPPSKFVKRSPIPSQSIPRGQVLELNNGASSSAAGRIEEMKLPELKELA 138


>ref|XP_002316817.2| hypothetical protein POPTR_0011s07070g [Populus trichocarpa]
           gi|550327847|gb|EEE97429.2| hypothetical protein
           POPTR_0011s07070g [Populus trichocarpa]
          Length = 308

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
 Frame = -3

Query: 490 KLTRPPSNFVKRSPIPHP-TSVRREVDLKDEGLSGN------ELIRVEEMKVTELKELA 335
           KLTRPPSNF K+SPIP P TS     +L  E   G       EL RVE+MK+TELKELA
Sbjct: 228 KLTRPPSNFTKKSPIPSPSTSRENTTELNSEASEGKASNHKLELPRVEKMKLTELKELA 286


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