BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00017968
         (772 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   195   1e-47
ref|XP_007015351.1| Pentatricopeptide repeat-containing protein,...   192   9e-47
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...   192   1e-46
ref|XP_007158057.1| hypothetical protein PHAVU_002G120500g [Phas...   185   1e-44
ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citr...   179   1e-42
gb|AFK33630.1| unknown [Lotus japonicus]                              178   2e-42
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]   175   2e-41
ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containi...   173   7e-41
gb|EXB70628.1| hypothetical protein L484_023813 [Morus notabilis]     172   1e-40
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...   167   3e-39
gb|EYU37498.1| hypothetical protein MIMGU_mgv1a021373mg, partial...   163   7e-38
ref|XP_004292904.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-34
ref|XP_006415303.1| hypothetical protein EUTSA_v10009456mg [Eutr...   146   9e-33
ref|XP_002519945.1| pentatricopeptide repeat-containing protein,...   146   9e-33
ref|NP_174459.1| pentatricopeptide repeat-containing protein [Ar...   144   5e-32
ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-31
ref|XP_006303657.1| hypothetical protein CARUB_v10011695mg [Caps...   141   3e-31
ref|XP_002893686.1| pentatricopeptide repeat-containing protein ...   138   2e-30
ref|NP_001059279.1| Os07g0244400 [Oryza sativa Japonica Group] g...   113   9e-23
ref|NP_001131386.1| hypothetical protein [Zea mays] gi|194691388...   109   1e-21

>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  195 bits (496), Expect = 1e-47
 Identities = 106/252 (42%), Positives = 150/252 (59%), Gaps = 2/252 (0%)
 Frame = -2

Query: 750 MAIVVHP-KTVPVNHFESSSSRYLNQWLFSSTTVCHHHPSKKYAIQICPPLRRPKRHNPD 574
           M ++  P  TVP +H       + ++ +    +     PS  + ++   PLR P  + P 
Sbjct: 1   MVLITAPVTTVPTHHL------FFDENVDLKNSKLRTLPSPNHQLEFRLPLRHPIHNFP- 53

Query: 573 LHNHTTDTPKPHVPN-PHNPERPRAPTSTTSDVLCLMDSLRLPIPPDIYASLIKECTVTR 397
             NHT+  P           ++ +   +TTSD+L LM++L  P+P DIY SLIKECTV+ 
Sbjct: 54  --NHTSPQPLTQTTTFTKKKKKKKRKGATTSDILHLMEALPFPVPIDIYTSLIKECTVSG 111

Query: 396 DAVQAAELHAHVKRTGFRPDVPFLNRFLLMHVSCGSIANARQLFDEMTRKDFNSWATMIA 217
           D   A EL  H+ ++G +P +PFLNR L+M VSCG + NAR +FD+M  +DFN+WAT+  
Sbjct: 112 DPETAIELATHISKSGIKPPLPFLNRILVMFVSCGLLENARHMFDKMRVRDFNTWATLFV 171

Query: 216 GYVDNGDYEEALEIFITMLQYHGNILEFPAWIIVSTLKACVNTTNMGLGEQVHGWILKMG 37
            Y DN DYEEA  +F+ ML   G ++EFP WI    L+AC  T N+ LG QVHGW+LK+G
Sbjct: 172 AYYDNTDYEEATNVFVNMLTQLG-MMEFPPWIWACLLRACACTVNVPLGMQVHGWLLKLG 230

Query: 36  YPLNLFLSSSLI 1
              ++ LSSSLI
Sbjct: 231 TCDHVLLSSSLI 242


>ref|XP_007015351.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508785714|gb|EOY32970.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 413

 Score =  192 bits (489), Expect = 9e-47
 Identities = 103/208 (49%), Positives = 138/208 (66%), Gaps = 5/208 (2%)
 Frame = -2

Query: 609 PPLRRPKRHNP-DLHNHTTDTPKPHVPNPHNPERPRAP----TSTTSDVLCLMDSLRLPI 445
           PP+ +     P  +   ++ TP P  P P +  +P +     + TTSD+L LMDSL LPI
Sbjct: 34  PPISQLHSQLPLRITKQSSKTPPP--PTPISTSKPISSNPCSSHTTSDILRLMDSLSLPI 91

Query: 444 PPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRFLLMHVSCGSIANARQLF 265
           PPDIYASL+KECTVTR + +A ELH+H++ +  +P +P LNR LLMHVSCG +  AR LF
Sbjct: 92  PPDIYASLVKECTVTRHSRRALELHSHIRNSRIKPSLPLLNRLLLMHVSCGHLDIARHLF 151

Query: 264 DEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILEFPAWIIVSTLKACVNTT 85
           D+M  +DFNSWA MI   +  GD E+A+  F+ M + H  + + P+WIIV  LK+CV T 
Sbjct: 152 DQMLLRDFNSWAIMIVACLHAGDSEQAIAYFVRM-ERHNLLFKCPSWIIVCLLKSCVVTK 210

Query: 84  NMGLGEQVHGWILKMGYPLNLFLSSSLI 1
           NMGLG+QVHG +LK+G   +  LS SLI
Sbjct: 211 NMGLGKQVHGQLLKLGASNDSSLSGSLI 238


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score =  192 bits (488), Expect = 1e-46
 Identities = 98/169 (57%), Positives = 121/169 (71%), Gaps = 3/169 (1%)
 Frame = -2

Query: 498 TSTTSDVLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNR 319
           TST +D+L LMD L LPIPPDIYASLIKE + T DA QA +L AH+ R+G       LNR
Sbjct: 58  TSTPTDILRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNR 117

Query: 318 FLLMHVSCGSIANARQLFDEMT--RKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGN 145
            LLM+VSCG I  AR +FD+M    K+  SWA M+A Y+DNG YEEA+ +F+ M++ H  
Sbjct: 118 ILLMYVSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMMELHST 177

Query: 144 I-LEFPAWIIVSTLKACVNTTNMGLGEQVHGWILKMGYPLNLFLSSSLI 1
           I LE PAWI +  LKACV+T N+ LG+QVHGW+LK+GY  NLFLS  LI
Sbjct: 178 IMLELPAWIFICVLKACVHTMNLTLGKQVHGWLLKVGYATNLFLSCYLI 226


>ref|XP_007158057.1| hypothetical protein PHAVU_002G120500g [Phaseolus vulgaris]
           gi|561031472|gb|ESW30051.1| hypothetical protein
           PHAVU_002G120500g [Phaseolus vulgaris]
          Length = 420

 Score =  185 bits (470), Expect = 1e-44
 Identities = 99/213 (46%), Positives = 132/213 (61%), Gaps = 1/213 (0%)
 Frame = -2

Query: 636 SKKYAIQICPPLRRPKRHNP-DLHNHTTDTPKPHVPNPHNPERPRAPTSTTSDVLCLMDS 460
           S  + +++ PPLR P    P  L   TT   K  +      E      +TT D+L LMD+
Sbjct: 34  SPSHQLELLPPLRYPIHTFPRPLIPQTTTFTKKEIKKKKRKE------ATTLDILHLMDA 87

Query: 459 LRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRFLLMHVSCGSIAN 280
           L  PI  DIY SLIKECTV+ D   A EL+ H+ ++  +P +PFLNR L+M VSCG + N
Sbjct: 88  LPFPITIDIYTSLIKECTVSGDPETAIELYTHISKSDIKPPLPFLNRILIMFVSCGMLEN 147

Query: 279 ARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILEFPAWIIVSTLKA 100
           AR +F++M  +DFNSWAT+   Y DN +YEEA  +F+ ML   G +L+FP WI    L+A
Sbjct: 148 ARHMFEKMRVRDFNSWATLFVAYYDNAEYEEATAVFVNMLGQLG-MLQFPPWIWACLLRA 206

Query: 99  CVNTTNMGLGEQVHGWILKMGYPLNLFLSSSLI 1
           C  T N+ LG QVHGW+LK+G   ++ LSSSLI
Sbjct: 207 CACTLNVPLGLQVHGWLLKLGACDHVLLSSSLI 239


>ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citrus clementina]
           gi|557539679|gb|ESR50723.1| hypothetical protein
           CICLE_v10033975mg [Citrus clementina]
          Length = 425

 Score =  179 bits (454), Expect = 1e-42
 Identities = 104/228 (45%), Positives = 134/228 (58%), Gaps = 10/228 (4%)
 Frame = -2

Query: 654 VCHHHPSKKYAIQICPPLRRPKRHNPDLHNHTTD--TPKPHVP-----NPHNPERPRAPT 496
           V  H PS      +C P       N  + NH     +PKP  P     N     +     
Sbjct: 8   VAVHSPSSTSRF-VCHPCGSNNLINSAVENHQLPLRSPKPTKPLKTSSNWRETTQSIPAN 66

Query: 495 STTSDVLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHV-KRTGFRPDVPFLNR 319
           ++++++L LMD+L LPI  D+Y  LIKECT  +D+  A EL  H+ KR   +P + FLNR
Sbjct: 67  TSSANILHLMDNLCLPITTDMYTCLIKECTFQKDSAGAFELLNHIRKRVNIKPTLLFLNR 126

Query: 318 FLLMHVSCGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGN-- 145
            LLMHVSCG +  ARQLFDEM  +DFNSWA MI GYVD  DY+E + +F  M++      
Sbjct: 127 LLLMHVSCGQLDTARQLFDEMPLRDFNSWAVMIVGYVDVADYQECITLFAEMMKRKKGHM 186

Query: 144 ILEFPAWIIVSTLKACVNTTNMGLGEQVHGWILKMGYPLNLFLSSSLI 1
           +L FPAWIIV  LKACV T NM LG+QVHG + K+G   N+ L+ SLI
Sbjct: 187 LLVFPAWIIVCVLKACVCTMNMELGKQVHGLLFKLGSSRNISLTGSLI 234


>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  178 bits (451), Expect = 2e-42
 Identities = 90/165 (54%), Positives = 112/165 (67%)
 Frame = -2

Query: 495 STTSDVLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRF 316
           +TTS +L LMD L  PIP DIY SLIKECT++ D   A ELH H+  +G +P + F+NR 
Sbjct: 12  ATTSHILHLMDVLPFPIPIDIYTSLIKECTLSPDPQTAIELHTHIAHSGIKPPLSFINRI 71

Query: 315 LLMHVSCGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILE 136
           L+M VSCG +  A QLFD M  KDFNSWAT+   Y DN DYEEA+++F+ ML   G + E
Sbjct: 72  LVMFVSCGLLDYACQLFDAMPVKDFNSWATLFIAYYDNADYEEAIDVFLAMLHQLG-MSE 130

Query: 135 FPAWIIVSTLKACVNTTNMGLGEQVHGWILKMGYPLNLFLSSSLI 1
           FP WI    LKAC    N+ LG QVHGW+LK+G   ++ LSSSLI
Sbjct: 131 FPPWICACFLKACACIENIPLGMQVHGWLLKLGTCDHVLLSSSLI 175


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score =  175 bits (443), Expect = 2e-41
 Identities = 98/208 (47%), Positives = 125/208 (60%), Gaps = 7/208 (3%)
 Frame = -2

Query: 645 HHPSKKYAIQICPPLRRPKRHNPDLHNHTTDTPKPHVPNPHNPERPRA----PTSTTSDV 478
           HHP     IQ  PP       N D     ++  K         ++  +     TST +D+
Sbjct: 170 HHPGTITIIQ--PPKINSTAFNDDDDCKGSNKKKKKKEKKKEKKKSNSNATPTTSTPTDI 227

Query: 477 LCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRFLLMHVS 298
           L LMD L LPIPPDIYASLIKE + T DA QA +L AH+ R+G       LNR LLM+VS
Sbjct: 228 LRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNRILLMYVS 287

Query: 297 CGSIANARQLFDEMT--RKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNI-LEFPA 127
           CG I  AR +FD+M    K+  SWA M+A Y+DNG YEEA+ +F+ M++ H  I LE PA
Sbjct: 288 CGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMMELHSTIMLELPA 347

Query: 126 WIIVSTLKACVNTTNMGLGEQVHGWILK 43
           WI +  LKACV+T N+ LG+QVHGW+ K
Sbjct: 348 WIFICVLKACVHTMNLTLGKQVHGWLTK 375


>ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Cicer arietinum]
          Length = 418

 Score =  173 bits (438), Expect = 7e-41
 Identities = 93/218 (42%), Positives = 132/218 (60%), Gaps = 5/218 (2%)
 Frame = -2

Query: 639 PSKKYAIQICPPLRRPKRHNPDLHNHT---TDTPKPHVPNPHNPERPRAPTSTTSDVLCL 469
           PS  + + +  P R PK  N   H  +   T TP  +  N  N    +  ++TTS +L L
Sbjct: 21  PSSNHQLHLRLPFRNPKLINFPHHPSSQPLTVTPPRNKNNTKNKNNNKRKSATTSHILPL 80

Query: 468 MDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRFLLMHVSCGS 289
           MD+L  PIP DIY SL+KECT++ D   A ELH+H+ R+G  P +  LNR L+M VSCG 
Sbjct: 81  MDALHFPIPIDIYTSLVKECTLSGDPETATELHSHITRSGIGPPLTLLNRILIMFVSCGL 140

Query: 288 IANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILEFP--AWIIV 115
           + +AR +FDEM  ++F+SWA +   Y +N DYE A+++F+ ML+  G ++EFP   W   
Sbjct: 141 LQSARHVFDEMPVRNFHSWAILFVAYYENSDYENAIDVFMRMLRQLG-VMEFPFLPWFWS 199

Query: 114 STLKACVNTTNMGLGEQVHGWILKMGYPLNLFLSSSLI 1
             L AC  T N+ LG QVHG + K+G   ++ +SSSLI
Sbjct: 200 CLLTACACTVNVPLGMQVHGSLTKLGACDHVLISSSLI 237


>gb|EXB70628.1| hypothetical protein L484_023813 [Morus notabilis]
          Length = 453

 Score =  172 bits (436), Expect = 1e-40
 Identities = 103/233 (44%), Positives = 135/233 (57%), Gaps = 21/233 (9%)
 Frame = -2

Query: 636 SKKYAIQICPPLRRPKRHNPDLHNHTTDTPKPHV-PNP-HNPERPRA------------- 502
           + K   Q+  PLR P + +  +++    T  P V PN  H  E   +             
Sbjct: 37  TSKATFQVSLPLRGPNKPHSVINHEKLGTIAPQVRPNSCHTVEANCSSQILVEKKMRKKN 96

Query: 501 -----PTSTTSDVLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRP- 340
                P  +TSDVL LMD+L LPI PD+Y S +KECT++ D   A +LH H+ R   +  
Sbjct: 97  ALIAPPACSTSDVLRLMDALCLPISPDMYISFMKECTISADFCGAEDLHNHISRNSLQHL 156

Query: 339 DVPFLNRFLLMHVSCGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITML 160
            +P LNR L M+VSCG +  A  LF  M  KDF SWATMI   V+N DYEEA  +F+ ML
Sbjct: 157 ALPLLNRLLFMNVSCGRLDLACDLFYRMPFKDFKSWATMIVANVNNSDYEEATSLFLKML 216

Query: 159 QYHGNILEFPAWIIVSTLKACVNTTNMGLGEQVHGWILKMGYPLNLFLSSSLI 1
            +H N+LEFP+WIIV  LK CV T NM LG+QVH   LK+G+  +L+L+S LI
Sbjct: 217 -HHINMLEFPSWIIVCLLKTCVCTRNMELGKQVHACALKLGHANSLYLASCLI 268


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  167 bits (424), Expect = 3e-39
 Identities = 90/202 (44%), Positives = 120/202 (59%), Gaps = 1/202 (0%)
 Frame = -2

Query: 603 LRRPKRHNPDLHNHTTDTPKPHVPNPHNPERPRAPTSTTSDVLCLMDSLRLPIPPDIYAS 424
           LR P R NP   N +   P      P    + R    TTS +L LMD+L  PI  DIY S
Sbjct: 36  LRLPLRRNPKPKNLSLIHPSSQPITPPKKSKRRRKCDTTSHILPLMDALHFPITIDIYTS 95

Query: 423 LIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRFLLMHVSCGSIANARQLFDEMTRKD 244
           L+KECT++ D   A ELH  +   G    +  LNR L+M VSCG + NAR++FD M+ +D
Sbjct: 96  LVKECTLSTDPETAIELHTQIITRGIELPLTLLNRILIMFVSCGLLENARRVFDVMSVRD 155

Query: 243 FNSWATMIAGYVDNGDYEEALEIFITML-QYHGNILEFPAWIIVSTLKACVNTTNMGLGE 67
           F+SWAT+   Y +NG+YE A+++F++ML Q       FP WI    LKAC  T N+ LG 
Sbjct: 156 FHSWATLFVSYYENGEYENAIDVFVSMLCQLDVMGFSFPPWIWSCLLKACACTMNVPLGM 215

Query: 66  QVHGWILKMGYPLNLFLSSSLI 1
           QVHG +LK+G   ++ +SSSLI
Sbjct: 216 QVHGCLLKLGACDHVLISSSLI 237



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
 Frame = -2

Query: 480 VLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRFLLMHV 301
           +LC +D +    PP I++ L+K C  T +     ++H  + + G    V   +  +  + 
Sbjct: 182 MLCQLDVMGFSFPPWIWSCLLKACACTMNVPLGMQVHGCLLKLGACDHVLISSSLIRFYG 241

Query: 300 SCGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNI-LEFPAW 124
               + +A  +F+ ++R +  +W   I        + EAL  F  M    G + ++  ++
Sbjct: 242 RFKCLEDANMVFNRVSRHNTLTWTAKIVSSCRERHFSEALGDFKKM----GRVGVKKDSF 297

Query: 123 IIVSTLKACVNTTNMG-LGEQVHGWILKMGYPLNLFLSSSLI 1
              S LKAC    N G  GEQVH   +K+G   + ++  SLI
Sbjct: 298 TFSSVLKACGRMQNRGSCGEQVHADAIKLGLDSDSYVQCSLI 339


>gb|EYU37498.1| hypothetical protein MIMGU_mgv1a021373mg, partial [Mimulus
           guttatus]
          Length = 345

 Score =  163 bits (412), Expect = 7e-38
 Identities = 84/160 (52%), Positives = 115/160 (71%), Gaps = 7/160 (4%)
 Frame = -2

Query: 459 LRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRFLLMHVSCGSIAN 280
           L+LPIPPDIY SLIKECT   D +++ ELH H++R+GFR  +P LNR LLM+VS G +  
Sbjct: 1   LKLPIPPDIYTSLIKECTELGDPLKSIELHEHMRRSGFRFTLPLLNRLLLMYVSSGCLDR 60

Query: 279 ARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITML--QYHGNI----LEFP-AWI 121
           ARQLFD+M  +DFNSWA +IAG+V+NG+++EA+ +F+ ML  Q  GN+    + F  + I
Sbjct: 61  ARQLFDQMFLRDFNSWAVLIAGFVENGEHDEAINLFVEMLNRQDMGNVGLDRMGFSVSGI 120

Query: 120 IVSTLKACVNTTNMGLGEQVHGWILKMGYPLNLFLSSSLI 1
           +V  LKAC+ T++  LG QVHGW+ KMG+  +  LS  LI
Sbjct: 121 LVCVLKACLFTSDFELGTQVHGWLWKMGFSESASLSCFLI 160


>ref|XP_004292904.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Fragaria vesca subsp. vesca]
          Length = 421

 Score =  152 bits (383), Expect = 2e-34
 Identities = 96/231 (41%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
 Frame = -2

Query: 663 STTVCHHHPSKKYAIQICPPLRRPKRHNPDLHNHTTDTPKPHVPNPHNPERPRAPTSTTS 484
           STT  +H    K+ +    PL R  + NP   N+TT   K +       +       +TS
Sbjct: 26  STTNQNHRSISKFRL----PLPRSSKSNPLTSNNTTR--KKNNTRKKRKKNENGSRCSTS 79

Query: 483 DVLCLMDSLRLPIPPD------IYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLN 322
           D+L LMD L++P+         +YASLI +C+   D+  A  L AH+ R    P +  LN
Sbjct: 80  DILRLMDGLQVPVTSTTLSDNHMYASLINDCS---DSGAALHLQAHLTRKSPPPPLHLLN 136

Query: 321 RFLLMHVSCGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQY---H 151
           R LL HV  G + NA QLFDEM  KDFNSWAT+I  Y  N DY EAL +F++ML     H
Sbjct: 137 RLLLRHVCNGRLDNAHQLFDEMPLKDFNSWATLIVAYAQNADYAEALRLFLSMLHLQDCH 196

Query: 150 GNILEFPAWIIVSTLKACVNTTNMGLGEQVHGWILKMGYP-LNLFLSSSLI 1
            +I EFPAWI+   L A   T ++GLGEQ+HG  LK+G+   ++F+++SLI
Sbjct: 197 VDISEFPAWIMACVLDA---TMDVGLGEQLHGCCLKLGHANRDMFVATSLI 244


>ref|XP_006415303.1| hypothetical protein EUTSA_v10009456mg [Eutrema salsugineum]
           gi|557093074|gb|ESQ33656.1| hypothetical protein
           EUTSA_v10009456mg [Eutrema salsugineum]
          Length = 400

 Score =  146 bits (368), Expect = 9e-33
 Identities = 70/156 (44%), Positives = 101/156 (64%)
 Frame = -2

Query: 501 PTSTTSDVLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLN 322
           P  +TSD+L LMDSL LP   D+Y+ L KE T   D   A +L  H+  +  RP   FLN
Sbjct: 69  PRCSTSDILRLMDSLSLPGNEDLYSCLAKESTTECDQRGAYDLQVHIMNSSVRPRTTFLN 128

Query: 321 RFLLMHVSCGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNI 142
           R LLMHVSCG +   RQ+FD+M ++DF+SWA +I G ++ GDY++A+ +F++ML+    +
Sbjct: 129 RLLLMHVSCGRLDITRQMFDKMPQRDFHSWAIVILGCIEMGDYQDAVFLFVSMLKNQNRV 188

Query: 141 LEFPAWIIVSTLKACVNTTNMGLGEQVHGWILKMGY 34
            + P WI+   LKAC    ++ LG+QVHG   K+G+
Sbjct: 189 SKIPPWIMGCVLKACGMIRDLDLGKQVHGLCQKLGF 224


>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 403

 Score =  146 bits (368), Expect = 9e-33
 Identities = 90/224 (40%), Positives = 128/224 (57%), Gaps = 12/224 (5%)
 Frame = -2

Query: 636 SKKYAI--QICPPLRRPKRHNPDLHNHTTDTPKPHVPN--PHNPERPRAPTSTTSDVLCL 469
           SK Y++  + C    +  + N    NHT   P    PN  P N   P   + ++SD++ L
Sbjct: 6   SKLYSVGARQCINADQSTKKNITAPNHTK-LPPLRTPNIKPIN-HLPAKKSCSSSDIMRL 63

Query: 468 MDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAH-VKRTGFRPDVPFLNRFLLMHVSCG 292
           MDSL  PIPPDIY SLIKECT+T D+ +A  LH+H + +T  +   P ++R LLMHVSCG
Sbjct: 64  MDSLCHPIPPDIYTSLIKECTLTSDSTEALCLHSHLISQTNLKLTPPLVHRLLLMHVSCG 123

Query: 291 SIANARQLFDEM-TRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYH----GNILEFPA 127
            +  AR LFD+M  +KDF SW  +I G   N  YE  + +FI ML  H    G + +   
Sbjct: 124 QLDIARNLFDKMPLKKDFISWVIVIVGCFSNSKYEAGINLFIDMLLQHSVYDGLMFDLNT 183

Query: 126 W--IIVSTLKACVNTTNMGLGEQVHGWILKMGYPLNLFLSSSLI 1
           W  II+  +K C+ + N+ LG+QVHG + K+G    +  + SL+
Sbjct: 184 WNIIILCIIKCCIYSMNISLGKQVHGILFKVGLTSEISFNVSLM 227


>ref|NP_174459.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169166|sp|Q9C6R9.1|PPR66_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g31790 gi|12321298|gb|AAG50719.1|AC079041_12
           hypothetical protein [Arabidopsis thaliana]
           gi|111074348|gb|ABH04547.1| At1g31790 [Arabidopsis
           thaliana] gi|332193272|gb|AEE31393.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 409

 Score =  144 bits (362), Expect = 5e-32
 Identities = 83/205 (40%), Positives = 116/205 (56%), Gaps = 4/205 (1%)
 Frame = -2

Query: 603 LRRPKRHNPDLHNHTTDTPKPHVPNPH-NPERPRAPTSTTSDVLCLMDSLRLPIPPDIYA 427
           LR+PK        H    P   +  P   P+ P +  ST SD+L LMDSL LP   DIY+
Sbjct: 42  LRKPK--------HQKSEPVVVIQQPQIQPQNPSSRCST-SDILRLMDSLSLPGNEDIYS 92

Query: 426 SLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRFLLMHVSCGSIANARQLFDEMTRK 247
            L KE     D   A EL  H+ ++  RP + F+NR LLMHVSCG +   RQ+FD M  +
Sbjct: 93  CLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHR 152

Query: 246 DFNSWATMIAGYVDNGDYEEALEIFITMLQY-HGNILEFPAWIIVSTLKACVNTTNMGLG 70
           DF+SWA +  G ++ GDYE+A  +F++ML++      + P+WI+   LKAC    +  LG
Sbjct: 153 DFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELG 212

Query: 69  EQVHGWILKMGY--PLNLFLSSSLI 1
           +QVH    K+G+    + +LS SLI
Sbjct: 213 KQVHALCHKLGFIDEEDSYLSGSLI 237


>ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Solanum lycopersicum]
          Length = 465

 Score =  142 bits (357), Expect = 2e-31
 Identities = 75/160 (46%), Positives = 100/160 (62%), Gaps = 4/160 (2%)
 Frame = -2

Query: 468 MDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRFLLMHVSCGS 289
           MDSL   IP D+Y SLIKECT +RD + A E++ HV ++   P +P LNR LLM V CG 
Sbjct: 1   MDSLGFNIPVDVYVSLIKECTESRDPLNAVEVYEHVCKSDVIPSLPLLNRLLLMLVLCGC 60

Query: 288 IANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILE----FPAWI 121
              ARQLFD+M  ++  SWA MIAG V+NG+   AL +F+ M    GN+ +        I
Sbjct: 61  FEQARQLFDKMRVRNSQSWAAMIAGCVENGECVGALRLFMEMQSEAGNLCKCGDLIDDGI 120

Query: 120 IVSTLKACVNTTNMGLGEQVHGWILKMGYPLNLFLSSSLI 1
           +V  LKACV   N+  G Q+HGW+LK+G   ++ L+S LI
Sbjct: 121 LVCVLKACVELMNLEFGRQIHGWLLKLGNCESMVLNSFLI 160


>ref|XP_006303657.1| hypothetical protein CARUB_v10011695mg [Capsella rubella]
           gi|482572368|gb|EOA36555.1| hypothetical protein
           CARUB_v10011695mg [Capsella rubella]
          Length = 411

 Score =  141 bits (355), Expect = 3e-31
 Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 3/193 (1%)
 Frame = -2

Query: 603 LRRPKRHNPDLHNHTTDTPKPHVPNPH-NPERPRAPTSTTSDVLCLMDSLRLPIPPDIYA 427
           LR+PK        H    P   +  P     +  +P  + SD+L LMD+L LP   D+Y+
Sbjct: 42  LRKPK--------HQKSEPVVVIQQPQIQTTQKSSPRCSISDILRLMDTLSLPGNEDLYS 93

Query: 426 SLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRFLLMHVSCGSIANARQLFDEMTRK 247
            L KE     D   A EL  H+ ++  RP   F+NR LLMHVSCG +   R +FD+M  +
Sbjct: 94  CLAKESARENDRRGAYELQVHIMKSSIRPSTTFVNRLLLMHVSCGRLDITRNMFDKMPHR 153

Query: 246 DFNSWATMIAGYVDNGDYEEALEIFITMLQY--HGNILEFPAWIIVSTLKACVNTTNMGL 73
           DF+SWA +  G ++ GDYE+A  +F+ ML++  +G   + P+WI+   LKAC    ++ L
Sbjct: 154 DFHSWAIVFLGCIEMGDYEDAALLFVAMLKHSKNGGAFKIPSWIMGCVLKACAMIRDLAL 213

Query: 72  GEQVHGWILKMGY 34
           G+QVHG   K+G+
Sbjct: 214 GKQVHGLCQKLGF 226


>ref|XP_002893686.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339528|gb|EFH69945.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 410

 Score =  138 bits (347), Expect = 2e-30
 Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
 Frame = -2

Query: 603 LRRPKRHNPDLHNHTTDTPKPHVPNPH-NPERPRAPTSTTSDVLCLMDSLRLPIPPDIYA 427
           LR+PK        H    P   +  P   P++P +P  +TSD+L LMDSL LP   D+Y+
Sbjct: 42  LRKPK--------HQKSEPVVVIQQPQIQPQKP-SPRCSTSDILRLMDSLSLPGNEDLYS 92

Query: 426 SLIKECTVTRDAVQAAELHAHVKRTGFR-PDVPFLNRFLLMHVSCGSIANARQLFDEMTR 250
            L KE     D   A EL  H+ ++  R P   F+NR LLMHVSCG +   R +FD+M  
Sbjct: 93  CLAKESARENDRRGAYELQVHIMKSSIRRPTTTFVNRLLLMHVSCGRLDITRHMFDKMPH 152

Query: 249 KDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGN-ILEFPAWIIVSTLKACVNTTNMGL 73
           +DF+SWA +  G ++ GDYE+A  +F++ML++  N   + P+WI+   LKAC    +  L
Sbjct: 153 RDFHSWAIVFLGCIEMGDYEDAALLFVSMLKHSQNGAFKIPSWIMGCVLKACAMIRDFEL 212

Query: 72  GEQVHGWILKMGY--PLNLFLSSSLI 1
           G+QVH    K+G     + +LS SLI
Sbjct: 213 GKQVHALCHKLGCIDEEDSYLSGSLI 238


>ref|NP_001059279.1| Os07g0244400 [Oryza sativa Japonica Group]
           gi|24417179|dbj|BAC22540.1| putative pentatricopeptide
           repeat-containing protein [Oryza sativa Japonica Group]
           gi|50508329|dbj|BAD30147.1| putative pentatricopeptide
           repeat-containing protein [Oryza sativa Japonica Group]
           gi|113610815|dbj|BAF21193.1| Os07g0244400 [Oryza sativa
           Japonica Group] gi|125599686|gb|EAZ39262.1| hypothetical
           protein OsJ_23686 [Oryza sativa Japonica Group]
          Length = 435

 Score =  113 bits (282), Expect = 9e-23
 Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
 Frame = -2

Query: 609 PPLRRPKRHNPDLHNHTTDTPKPHVPNPHNPE------RPRAPTSTTS--------DVLC 472
           P LR+P +  P    H    P+P +P P          R +  T  T+        DVL 
Sbjct: 45  PALRKPTKPPPPPPLH----PRPSLPVPTTSSDDDGDIRRKPATGATASLCSSGAGDVLR 100

Query: 471 LMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHV--KRTGFRPDVPFLNRFLLMHVS 298
           L+D+LRLP   D+Y SL+++C    DA + A +HAH+  K       +P  NR +L + +
Sbjct: 101 LLDALRLPPDEDVYVSLLRDCA---DAAEVASVHAHIAGKFAVSGLPLPLANRLVLAYAA 157

Query: 297 CGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITML-QYHGNILEFPAWI 121
           CG I  ARQ+FDEM  K+  +WATM++ Y D   + +AL++F+ M  Q  G   +     
Sbjct: 158 CGDIGAARQVFDEMPVKNGITWATMVSAYSDGCFHHDALQLFVQMCHQVRGITGDHYTHA 217

Query: 120 IVSTLKACVNTTNMGLGEQVHGWILK 43
           IV+ L++C     +  GEQVH +++K
Sbjct: 218 IVAVLRSCARVNELQFGEQVHAFVVK 243


>ref|NP_001131386.1| hypothetical protein [Zea mays] gi|194691388|gb|ACF79778.1| unknown
           [Zea mays] gi|414884126|tpg|DAA60140.1| TPA:
           hypothetical protein ZEAMMB73_895402 [Zea mays]
          Length = 438

 Score =  109 bits (272), Expect = 1e-21
 Identities = 75/205 (36%), Positives = 105/205 (51%), Gaps = 14/205 (6%)
 Frame = -2

Query: 609 PPLRRPKRHNPDLHNHTTDT---------PKPHVPNPHNPERPRAPTSTTSDVLCLMDSL 457
           P L RPK   P   N  TDT         P P   + H       P+S   DVL LMD+L
Sbjct: 54  PLLSRPKLPVPT--NTATDTTSGKDCTKKPPPEATDSH------PPSSGAGDVLRLMDAL 105

Query: 456 RLPIPPDIYASLIKECTVTRDAVQAAELHAHV--KRTGFRPDVPFLNRFLLMHVSCGSIA 283
            +P   DIY SL++EC    DA + A +HAH+  +R       P  NR LL + +CG I 
Sbjct: 106 GIPPDEDIYISLLRECA---DAAEVASVHAHITARRASDGLPSPVANRLLLSYAACGDIE 162

Query: 282 NARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGN-ILEFPAW--IIVS 112
            AR++FD M   +  +WATM++ Y D   + EA+ +F  M   HG  +L+   +   IV+
Sbjct: 163 AARRVFDGMPTTNGMAWATMVSAYSDGCLHHEAMRLFAHMC--HGTPVLDGDCYSHAIVA 220

Query: 111 TLKACVNTTNMGLGEQVHGWILKMG 37
            L++C     + LGEQVH  ++K G
Sbjct: 221 VLRSCTRAGELRLGEQVHALVVKKG 245