BLASTX nr result

ID: Paeonia24_contig00015907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00015907
         (430 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleop...    64   3e-08
ref|XP_006372915.1| U1 small nuclear ribonucleoprotein 70 kDa [P...    60   4e-07
ref|XP_007226570.1| hypothetical protein PRUPE_ppa024322mg [Prun...    59   9e-07
ref|XP_007026514.1| RNA-binding family protein [Theobroma cacao]...    58   1e-06
ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, pu...    56   6e-06
gb|AEM00018.1| topoisomerase 1B [Spodoptera exigua]                    55   8e-06
gb|ETO28457.1| hypothetical protein RFI_08676, partial [Reticulo...    55   1e-05

>ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
           [Vitis vinifera] gi|297743756|emb|CBI36639.3| unnamed
           protein product [Vitis vinifera]
          Length = 340

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/72 (47%), Positives = 44/72 (61%)
 Frame = +3

Query: 12  EREERSHKRTSADRDKDKDREQRSRKRSYMDKEEHSNKSSSVDREKRSHTTTSTQKEEYS 191
           +REE SH+R+S D+    DRE+R  KRS  D+E  S+K SS D  +RS   +    EE  
Sbjct: 251 DREEHSHRRSSIDKRSSIDREERFHKRSSSDREVRSHKRSSTDLVERSDKRSFIHGEERF 310

Query: 192 HKRSYMDREEYS 227
           H RS MD EE+S
Sbjct: 311 HSRSSMDWEEHS 322



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = +3

Query: 12  EREERSHKRTSADRDKDKDREQRSRKRSYMDKEEHSNKSSSVDREKRSHTTTSTQKEEYS 191
           E EE SH+ +S DR++   R     KRS +D+EE  +K SS DRE RSH  +ST   E S
Sbjct: 239 EGEEHSHEGSSVDREEHSHRRSSIDKRSSIDREERFHKRSSSDREVRSHKRSSTDLVERS 298

Query: 192 HKRSYMDREE 221
            KRS++  EE
Sbjct: 299 DKRSFIHGEE 308



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = +3

Query: 12  EREERSHKRTSADRDKDKDREQRSRKRSYMDKEEHSNKSSSVDREKRSHTTTSTQKEEYS 191
           +REER HKR+S+DR      E RS KRS  D  E S+K S +  E+R H+ +S   EE+S
Sbjct: 269 DREERFHKRSSSDR------EVRSHKRSSTDLVERSDKRSFIHGEERFHSRSSMDWEEHS 322

Query: 192 HKRSYMDREEYSASEKEQ 245
           HK S MDRE +S     Q
Sbjct: 323 HKSS-MDRERHSHKRHRQ 339



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 84  RKRSYMDKEEHSNKSSSVDREKRSHTTTSTQKEEYSHKRSYMDREEYS 227
           RKRS MD+EE S++ SS+DRE R H   S + EE+SH+ S +DREE+S
Sbjct: 209 RKRSNMDREEPSHRGSSIDREDRYHKGGSIEGEEHSHEGSSVDREEHS 256



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
 Frame = +3

Query: 3   SYKEREERSHKRTSADRDKDKDR------EQRSRKRSYMDKEEHSN------KSSSVDRE 146
           S  +REE SH+ +S DR+    +      E+ S + S +D+EEHS+      K SS+DRE
Sbjct: 212 SNMDREEPSHRGSSIDREDRYHKGGSIEGEEHSHEGSSVDREEHSHRRSSIDKRSSIDRE 271

Query: 147 KRSHTTTSTQKEEYSHKRSYMDREEYS 227
           +R H  +S+ +E  SHKRS  D  E S
Sbjct: 272 ERFHKRSSSDREVRSHKRSSTDLVERS 298


>ref|XP_006372915.1| U1 small nuclear ribonucleoprotein 70 kDa [Populus trichocarpa]
           gi|550319563|gb|ERP50712.1| U1 small nuclear
           ribonucleoprotein 70 kDa [Populus trichocarpa]
          Length = 317

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
 Frame = +3

Query: 3   SYKEREERSHKRTSADRDKDKDREQRS--------------RKRSYMDKEEHSNKSSSVD 140
           S +++EE SH+R+S D++ ++    RS               KRS +D+EEH  K S VD
Sbjct: 212 SSRDKEESSHRRSSIDKEAEESSNIRSYRDKEEHYERGGYHHKRSSLDREEHYEKRSPVD 271

Query: 141 REKRSHTTTSTQKEEYSHKRSYMDREEYSASEKEQG 248
            E+ SH      +EE +HKRS  DREE S    + G
Sbjct: 272 MEEPSHKKL-RDREERTHKRSSRDREEGSRKRHKHG 306


>ref|XP_007226570.1| hypothetical protein PRUPE_ppa024322mg [Prunus persica]
           gi|462423506|gb|EMJ27769.1| hypothetical protein
           PRUPE_ppa024322mg [Prunus persica]
          Length = 309

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/74 (45%), Positives = 44/74 (59%)
 Frame = +3

Query: 12  EREERSHKRTSADRDKDKDREQRSRKRSYMDKEEHSNKSSSVDREKRSHTTTSTQKEEYS 191
           E+EERSHKR+        D E  S KRS ++ E H N+SS +DR +RSH  TS  +++ S
Sbjct: 240 EKEERSHKRSM-------DPEDHSFKRSSVETEHHRNRSS-IDRAERSHKRTSRDRDDRS 291

Query: 192 HKRSYMDREEYSAS 233
           HKR    R E S S
Sbjct: 292 HKRHKSHRHERSTS 305


>ref|XP_007026514.1| RNA-binding family protein [Theobroma cacao]
           gi|508715119|gb|EOY07016.1| RNA-binding family protein
           [Theobroma cacao]
          Length = 338

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 16/90 (17%)
 Frame = +3

Query: 12  EREERSHKRTSADRDK--------DKD--------REQRSRKRSYMDKEEHSNKSSSVDR 143
           E+EE SHKR+S DR++        ++D        R++ S KR+ ++ EEH ++ SS DR
Sbjct: 216 EKEEYSHKRSSVDREEFSQRSSSIERDGHKRTAGGRQESSSKRNSVE-EEHHHRKSSTDR 274

Query: 144 EKRSHTTTSTQKEEYSHKRSYMDREEYSAS 233
            + S   T  ++E++ HK S++DREE S S
Sbjct: 275 SESSQKRTPIEREDHRHKCSFVDREELSHS 304



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
 Frame = +3

Query: 15  REERSHKRTSAD-----RDKDKDREQRSRKRSYMDKEEHSNKSSSVDREKRSHTTTSTQK 179
           R+E S KR S +     R    DR + S+KR+ +++E+H +K S VDRE+ SH+ ++ + 
Sbjct: 251 RQESSSKRNSVEEEHHHRKSSTDRSESSQKRTPIEREDHRHKCSFVDREELSHSRSTAEG 310

Query: 180 EEYSHKRSYMDREEYSA 230
            E S KR+  D+EE S+
Sbjct: 311 GEISRKRTSKDKEERSS 327


>ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
           communis] gi|223530750|gb|EEF32618.1| U1 small nuclear
           ribonucleoprotein 70 kD, putative [Ricinus communis]
          Length = 389

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
 Frame = +3

Query: 12  EREE-RSHKRTSADRDKDK------DREQRSRKRSYMDKEEHSNKSSSVDREKRSHTTTS 170
           +REE  SH+R+S D+++ +      +RE+R R RS   KEEHS++SSSV+RE+R    +S
Sbjct: 215 DREEGSSHRRSSIDKEESRHRSRSAEREERYRNRSPRLKEEHSHRSSSVEREERHSKRSS 274

Query: 171 TQKEEYSHKRSYMDRE 218
             KEE+S K    ++E
Sbjct: 275 RGKEEHSGKWHSEEKE 290


>gb|AEM00018.1| topoisomerase 1B [Spodoptera exigua]
          Length = 930

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
 Frame = +3

Query: 9   KEREERSHKRTSADRDKDK---DREQ-RSRKRSYMDKEEHSNKSSSVDREKRSHTTTSTQ 176
           KER +R H     DRDKDK   DRE+ R + RS  D+++H  KSSS   EK+S +++S++
Sbjct: 94  KERSDREHSSKDKDRDKDKHRSDREKHRGKDRSGRDRDKH--KSSSSSNEKKSSSSSSSK 151

Query: 177 KEEYSHKRSYMD-REEYSASEKEQG 248
            ++  HK S  D + +    E+E+G
Sbjct: 152 DKDRDHKSSSKDHKSKEKDKEREKG 176


>gb|ETO28457.1| hypothetical protein RFI_08676, partial [Reticulomyxa filosa]
          Length = 879

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/79 (34%), Positives = 45/79 (56%)
 Frame = +3

Query: 9   KEREERSHKRTSADRDKDKDREQRSRKRSYMDKEEHSNKSSSVDREKRSHTTTSTQKEEY 188
           KE+E+   K    D+DK+KD+++   K    DKE+  NKSS   + K  H++T+T KE+ 
Sbjct: 331 KEKEKEKEKEKEKDKDKEKDKDKDKDKDKDKDKEKEKNKSSRTTKHKPKHSSTAT-KEKD 389

Query: 189 SHKRSYMDREEYSASEKEQ 245
             K    D+E+    +K++
Sbjct: 390 KEKEKEKDKEKEKDKDKDK 408


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