BLASTX nr result
ID: Paeonia24_contig00015785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00015785
(1141 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 245 2e-62
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 239 2e-60
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 238 3e-60
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 231 6e-58
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 229 2e-57
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 228 4e-57
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 228 4e-57
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 228 4e-57
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 217 6e-54
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas... 211 4e-52
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 209 1e-51
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 206 1e-50
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 201 4e-49
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 200 1e-48
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218... 194 8e-47
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 194 8e-47
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 190 8e-46
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 188 3e-45
emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera] 180 9e-43
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus... 178 3e-42
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 245 bits (626), Expect = 2e-62
Identities = 165/415 (39%), Positives = 214/415 (51%), Gaps = 45/415 (10%)
Frame = -3
Query: 1136 WGPNNDSSQPE-------SSNDWSTQKSEDWSKSIVDSQRAPQKVSNQI-----EFTEPG 993
WG +++ E S+ W T+ S D S S V ++ N + E + G
Sbjct: 1461 WGKSSEDKLEEVETTVAKPSSAWGTEASWDKS-SEVTLEKVAAPAENPLSGWGTEAQDSG 1519
Query: 992 TSQGWEAPKK----SGGWISNKPETSHDWNSP---------KTDELNKSVVQSPKAGGWA 852
S W K + W N E + W++ K D++ +V S G
Sbjct: 1520 KSSDWSEWKDHANATASWGRNGSEENSGWDTKASWNTKALDKLDDVGSAVENSSSVWGAR 1579
Query: 851 TP-KTGGWNXXXXXXXXXXXXXXXXSQKAGGWTENVSTELTQQEPSQGWNTPTTGAKS-- 681
T GW + GGW NV + S G T AK
Sbjct: 1580 EDFSTKGWEDSSKPSANEKSIV----HQIGGW--NVPDAKGTDDSSWGKQKLTENAKGTD 1633
Query: 680 -SQWS---HQESGTSQPKASQGWDSPIDGGGGSESQ---WGPPRGG-FRKNR---RDGGE 534
S W H E+ +SQP +S WD P D GGSE++ WG R F+KNR GE
Sbjct: 1634 DSSWGKQKHTENESSQPASSNAWDLP-DATGGSETEMQVWGQSRKEPFKKNRGWASSSGE 1692
Query: 533 WKNKNFRPPNSPGTFGD---VPAFFTATRQRIDMFTSDEQDIIKDVDPIVTPIKRIMR-- 369
WK K RPP SPG D V A +T TRQR+DMFTS+EQDI+ DV+PI+ I+RIM
Sbjct: 1693 WKGKKNRPPRSPGVVNDDSTVNAMYTVTRQRLDMFTSEEQDILSDVEPIMRSIRRIMHQS 1752
Query: 368 GYNDGVRLSAEDQAFIVDNVLNYHPDKASKSGTGIDYIKVNTHEFHKDSRCLYVVSSDGR 189
GYNDG RLSA+D++FI DNV NYHPDKA K G GID+ KV+ H +DSRCL+VVS+DG
Sbjct: 1753 GYNDGDRLSADDKSFIFDNVFNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGS 1812
Query: 188 EEDFSYVKCIKNFVMGKYPELAESFSLKYFRKPEQ-RNRERSLSVAPETPRERSV 27
++DFSY KC+++F+ GKYPE + F KYFR+P NRE SL P P E++V
Sbjct: 1813 QQDFSYRKCLESFIRGKYPEFVDEFIGKYFRRPRSGGNREPSL---PPVPEEKTV 1864
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 239 bits (610), Expect = 2e-60
Identities = 162/415 (39%), Positives = 212/415 (51%), Gaps = 45/415 (10%)
Frame = -3
Query: 1136 WGPNNDSSQPE-------SSNDWSTQKSEDWSKSIVDSQRAPQKVSNQI-----EFTEPG 993
WG +++ E S+ W T+ S D S S V ++ N + E + G
Sbjct: 1459 WGKSSEDKLEEVETTVAKPSSAWGTEASWDKS-SEVTLEKVAAPAENPLSGWGTEAQDSG 1517
Query: 992 TSQGWEAPKK----SGGWISNKPETSHDWNSP---------KTDELNKSVVQSPKAGGWA 852
S W K + W N E + W++ K D++ +V S G
Sbjct: 1518 KSSDWSEWKDHANATASWGRNGSEENSGWDTKASWKTKALDKLDDVGSAVENSSSVWGAR 1577
Query: 851 TP-KTGGWNXXXXXXXXXXXXXXXXSQKAGGWTENVSTELTQQEPSQGWNTPTTGAKS-- 681
T GW + GGW NV + G T AK
Sbjct: 1578 EDFSTKGWEDSSKPSANEKSIV----HQIGGW--NVPDAKGTDDSCWGKQKLTENAKGTD 1631
Query: 680 -SQWS---HQESGTSQPKASQGWDSPIDGGGGSESQ---WGPPRGG-FRKNR---RDGGE 534
S W H E+ + QP +S WD P D GGSE++ WG R F+KNR GE
Sbjct: 1632 DSSWGKQKHTENESPQPASSNAWDLP-DATGGSETEMQVWGQSRKEPFKKNRGWASSSGE 1690
Query: 533 WKNKNFRPPNSPGTFGD---VPAFFTATRQRIDMFTSDEQDIIKDVDPIVTPIKRIMR-- 369
WK K RPP SPG D V A +T TRQR+DMFTS+EQDI+ V+PI+ I+RIM
Sbjct: 1691 WKGKKNRPPRSPGVVNDDSTVNAMYTVTRQRLDMFTSEEQDILSHVEPIMRSIRRIMHQS 1750
Query: 368 GYNDGVRLSAEDQAFIVDNVLNYHPDKASKSGTGIDYIKVNTHEFHKDSRCLYVVSSDGR 189
GYNDG RLSA+D++FI DNV NYHPDKA K G GID+ KV+ H +DSRCL+VVS+DG
Sbjct: 1751 GYNDGDRLSADDKSFIFDNVFNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGS 1810
Query: 188 EEDFSYVKCIKNFVMGKYPELAESFSLKYFRKPEQ-RNRERSLSVAPETPRERSV 27
++DFSY KC+++F+ GKYP+L + F KYFR+P NRE SL P P E++V
Sbjct: 1811 QQDFSYRKCLESFIRGKYPDLVDEFIGKYFRRPRSGGNREPSL---PPVPEEKTV 1862
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 238 bits (608), Expect = 3e-60
Identities = 147/397 (37%), Positives = 207/397 (52%), Gaps = 30/397 (7%)
Frame = -3
Query: 1136 WGPNNDSSQPESSNDWSTQKSEDWS------KSIVDSQRA---PQKVSNQIEFTEPGTSQ 984
WG S+Q ++++ W KS + S K V S R + + TE +
Sbjct: 1532 WGKEVSSNQADTASGWGKPKSPEISLGWGSTKESVKSDRGWGVSSSGGGRDKKTENQSLA 1591
Query: 983 GWEAPKKSGGW----ISNKPETSHDWNSPKTDELNKSVVQSPKAGG----WATPKTGGWN 828
G K+SGGW SN+ +T+ W PK+ E ++ S ++G W P + G N
Sbjct: 1592 G--QGKESGGWGNKVTSNQADTASGWGKPKSSENSQGWGLSKESGKEVHEWGVPNSAGGN 1649
Query: 827 XXXXXXXXXXXXXXXXSQKAGGWTENVSTELTQQEPSQGWNTPTTGAKSSQWSHQESGTS 648
K GW S+ Q+ + GW P + A S W S
Sbjct: 1650 GSETNNNNENQSLVEQG-KESGWDNKASSN--QEGTASGWGKPKSPALSEGWG---SPRE 1703
Query: 647 QPKASQGWDSPIDGGG---GSESQWGPPRGGFRKNRRDG--------GEWKNKNFRPPNS 501
KA GW P GGG G + QWG F+K+R +G G+WKNK RP +
Sbjct: 1704 PVKAVHGWGVPNSGGGNGSGRDQQWGQQSREFKKDRFEGSRGWGSNNGDWKNKRNRP-SK 1762
Query: 500 PGTFGDVPAFFTATRQRIDMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQA 327
P + FT TRQR+D+FTS EQDI+ D++P++ I+RIM GYNDG LSA+DQ+
Sbjct: 1763 PHEDLNASGIFTTTRQRLDVFTSQEQDILSDIEPLMLSIRRIMHQTGYNDGDPLSADDQS 1822
Query: 326 FIVDNVLNYHPDKASKSGTGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFV 147
+++DNV +YHPDKA K G GID++ V+ H ++SRC Y+VS+DG ++DFSY KC++NF+
Sbjct: 1823 YVLDNVFHYHPDKAVKMGAGIDHVTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLENFI 1882
Query: 146 MGKYPELAESFSLKYFRKPEQRNRERSLSVAPETPRE 36
GKYP+LA+ F KYF + R R + APE E
Sbjct: 1883 KGKYPDLADEFIAKYFARRGNRQR----TPAPEGTEE 1915
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 231 bits (588), Expect = 6e-58
Identities = 147/385 (38%), Positives = 211/385 (54%), Gaps = 17/385 (4%)
Frame = -3
Query: 1121 DSSQPESSNDWSTQKSEDWSK-SIVDSQRAPQKVSNQIEFTEPGTSQGWEA---PKKSG- 957
++SQ ++ W QKS D K S+ +++ +QIE E G+ G++ +KS
Sbjct: 1598 EASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNE-GSDHGFDQVTNEQKSSD 1656
Query: 956 --GWISNKPETSHDWNSPKTDELNKSV-VQSPKAGGWATPKTGGWNXXXXXXXXXXXXXX 786
GW S + +T W+ K+ E ++S Q+ G W P+
Sbjct: 1657 TRGWDSQE-KTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQ-------- 1707
Query: 785 XXSQKAGGWTENVSTELTQQEP---SQGWNTPTTGAKSSQW-SHQESGTSQPKASQGWDS 618
++ ST+ +Q +P S GW + S W SH+ES S+ +S GWD
Sbjct: 1708 ----------DDSSTQFSQLKPPETSLGWEQQKSPEVSHGWGSHKES--SEQTSSHGWDK 1755
Query: 617 PIDGGGGSESQWGPPRGGFRKNRRDGGEWKNKNFRPPNSPGTFGD---VPAFFTATRQRI 447
G G WG + GEWKN+ RPP SPG D + A +TA+ QR+
Sbjct: 1756 KNQGSKG----WGG----------NAGEWKNRKNRPPKSPGMSNDDANLRALYTASGQRL 1801
Query: 446 DMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVLNYHPDKASKSG 273
DMFTS+EQDI+ D++PI+ I+++M GYNDG LSAEDQ+F++ +V N+HPDKA+K G
Sbjct: 1802 DMFTSEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMG 1861
Query: 272 TGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKYFRK 93
GID+ V+ H ++SRC YVV++DG +EDFSY KC+ NF+ GKYP+LAE F KYFRK
Sbjct: 1862 AGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRK 1921
Query: 92 PEQRNRERSLSVAPETPRERSVGPE 18
P + NR R + A E +S+G E
Sbjct: 1922 P-RPNRNRDRNPASEENENKSIGGE 1945
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 229 bits (584), Expect = 2e-57
Identities = 150/428 (35%), Positives = 209/428 (48%), Gaps = 54/428 (12%)
Frame = -3
Query: 1136 WGPNNDSS-------QPESSNDWSTQKSEDWSKSIVDSQRAPQKVSNQIEFT-------- 1002
WG N + ES N WS + + V SQ+A + +F+
Sbjct: 1569 WGTENAENAQSTWRTSTESENGWSGRGGSKVESTDVQSQKAVENPKGWNDFSAGVRKPQT 1628
Query: 1001 -EPGTSQGWEAPKKSGGWISNKPE-TSHDWNSPKTDELNKSVVQSPKA-----GGWATPK 843
G+ G + +K G + E T H W D ++ + K+ G W PK
Sbjct: 1629 ENAGSGWGMKGSEKKGDIELEQDESTRHSWKQKSADASSQGAWERQKSPDTSKGTWEQPK 1688
Query: 842 T-----GGWNXXXXXXXXXXXXXXXXSQKA---GGWTENVSTELTQ----QEPSQGWNTP 699
+ G W G W + S E+ Q Q+ S +
Sbjct: 1689 SAEMSHGAWGQQKSPDVSQGVWGLEKPASTNSQGSWGQQKSPEIPQGNWGQQTSPDISQG 1748
Query: 698 TTGAKSS------QWSHQE-SGTSQPKASQGWDSPIDGGGGSESQWGPPRGGFRKNRRDG 540
T G + S W Q+ S TSQP WDS + QWG ++ R +G
Sbjct: 1749 TWGQQKSPEMSQGSWGQQKPSDTSQPATVNQWDSQSEAAVERHQQWGHNGDSNKRKRFEG 1808
Query: 539 G--------EWKNKNFRPPNSPGTFGD---VPAFFTATRQRIDMFTSDEQDIIKDVDPIV 393
G EWK KN RP SPG D V A +TATRQR+D+FTS+EQD++ ++P +
Sbjct: 1809 GRSWGPNAGEWKGKNSRPAKSPGMVNDDSSVAAIYTATRQRLDIFTSEEQDVLSHIEPTM 1868
Query: 392 TPIKRIMR--GYNDGVRLSAEDQAFIVDNVLNYHPDKASKSGTGIDYIKVNTHEFHKDSR 219
I+RIM GYNDG +LSAED +FI+D V N+HP+K +K G+GIDY V+ H ++SR
Sbjct: 1869 LSIRRIMHQSGYNDGDQLSAEDHSFILDKVFNFHPEKEAKMGSGIDYFTVDRHGSFQESR 1928
Query: 218 CLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKYFRKPEQRNRERSLSVAPETPR 39
CL+V+S+DGR+EDFSY KC++N + KYPELAE+F+ KYF +P RN + +TP
Sbjct: 1929 CLFVISTDGRKEDFSYRKCLQNMIKEKYPELAEAFNDKYFSRPRPRN-----PMFGQTPP 1983
Query: 38 ERSVGPET 15
ER+ G ET
Sbjct: 1984 ERT-GNET 1990
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 228 bits (581), Expect = 4e-57
Identities = 146/385 (37%), Positives = 211/385 (54%), Gaps = 17/385 (4%)
Frame = -3
Query: 1121 DSSQPESSNDWSTQKSEDWSK-SIVDSQRAPQKVSNQIEFTEPGTSQGWEA---PKKSG- 957
++SQ ++ W QKS D K S+ +++ +QIE E G+ G++ +KS
Sbjct: 1658 EASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNE-GSDHGFDQVTNEQKSSD 1716
Query: 956 --GWISNKPETSHDWNSPKTDELNKSV-VQSPKAGGWATPKTGGWNXXXXXXXXXXXXXX 786
GW S + +T W+ K+ E ++S Q+ G W P+
Sbjct: 1717 TRGWDSQE-KTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEECSRESQ-------- 1767
Query: 785 XXSQKAGGWTENVSTELTQQEP---SQGWNTPTTGAKSSQW-SHQESGTSQPKASQGWDS 618
++ ST+ +Q +P S GW + S W S++ES S+ +S GWD
Sbjct: 1768 ----------DDSSTQFSQLKPPETSLGWEQQKSPEVSHGWGSNKES--SEQTSSHGWDK 1815
Query: 617 PIDGGGGSESQWGPPRGGFRKNRRDGGEWKNKNFRPPNSPGTFGD---VPAFFTATRQRI 447
G G WG + GEWKN+ RPP SPG D + A +TA+ QR+
Sbjct: 1816 KNQGSKG----WGG----------NAGEWKNRKNRPPKSPGMSNDDANLRALYTASGQRL 1861
Query: 446 DMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVLNYHPDKASKSG 273
DMFTS+EQDI+ D++PI+ I+++M GYNDG LSAEDQ+F++ +V N+HPDKA+K G
Sbjct: 1862 DMFTSEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMG 1921
Query: 272 TGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKYFRK 93
GID+ V+ H ++SRC YVV++DG +EDFSY KC+ NF+ GKYP+LAE F KYFRK
Sbjct: 1922 AGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRK 1981
Query: 92 PEQRNRERSLSVAPETPRERSVGPE 18
P + NR R + A E +S+G E
Sbjct: 1982 P-RPNRNRDRNPASEENENKSIGGE 2005
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 228 bits (581), Expect = 4e-57
Identities = 148/389 (38%), Positives = 199/389 (51%), Gaps = 18/389 (4%)
Frame = -3
Query: 1130 PNNDSSQPESSNDWSTQKSEDWSKSIVDSQRAPQKVSNQIEFTEPGTSQGWEAPKKSGGW 951
P + +Q +S W + +DW+K + S Q+ +P + W +
Sbjct: 1554 PEDPLAQATTSVGWDSSTGKDWTKRKLQSPSEQQR--------DPAI-KSWSSSHNVMKE 1604
Query: 950 ISNKPETSHDWNSPKTDELNKSVVQSPKAGGWATPKTGGWNXXXXXXXXXXXXXXXXSQK 771
SN+P ++H W+SP GWN ++
Sbjct: 1605 QSNQPASTHGWDSPGAK---------------------GWNDV---------------EE 1628
Query: 770 AGGWTENVST-ELTQQEPSQGWNTPTTGAKSSQWSHQESGTSQPKASQGWDSPIDGGGG- 597
W + S + Q E S GW G + Q +Q +SQGW SP G G
Sbjct: 1629 QSQWNQRGSAVKNDQSESSHGW-----GPSNEQ--------NQLPSSQGWGSPNAGAGHE 1675
Query: 596 --SESQWGPPRGGFRKNRRDGG--------EWKNKNFRPPNSPGTFGD---VPAFFTATR 456
++SQWG P G +K+R +G EWKNK RP G D FTATR
Sbjct: 1676 SETQSQWGQPSG--KKSRPEGSRGWGSNNTEWKNKKNRPNKPQGPLNDDYSAGGIFTATR 1733
Query: 455 QRIDMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVLNYHPDKAS 282
QR+D+FTS+EQDI+ DV+PI+ I+RIM GYNDG LSA+DQ++I+D V N HPDKA
Sbjct: 1734 QRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAV 1793
Query: 281 KSGTGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKY 102
K GTGIDY+ V+ H +SRC YVVS+DG +EDFSY KC++NF+ KYP+ AE+F KY
Sbjct: 1794 KMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKY 1853
Query: 101 FRKPEQ-RNRERSLSVAPETPRERSVGPE 18
FR+P NRERS+ RE+SV PE
Sbjct: 1854 FRRPRAGGNRERSVIPEDGGNREQSVVPE 1882
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 228 bits (581), Expect = 4e-57
Identities = 148/389 (38%), Positives = 199/389 (51%), Gaps = 18/389 (4%)
Frame = -3
Query: 1130 PNNDSSQPESSNDWSTQKSEDWSKSIVDSQRAPQKVSNQIEFTEPGTSQGWEAPKKSGGW 951
P + +Q +S W + +DW+K + S Q+ +P + W +
Sbjct: 1494 PEDPLAQATTSVGWDSSTGKDWTKRKLQSPSEQQR--------DPAI-KSWSSSHNVMKE 1544
Query: 950 ISNKPETSHDWNSPKTDELNKSVVQSPKAGGWATPKTGGWNXXXXXXXXXXXXXXXXSQK 771
SN+P ++H W+SP GWN ++
Sbjct: 1545 QSNQPASTHGWDSPGAK---------------------GWNDV---------------EE 1568
Query: 770 AGGWTENVST-ELTQQEPSQGWNTPTTGAKSSQWSHQESGTSQPKASQGWDSPIDGGGG- 597
W + S + Q E S GW G + Q +Q +SQGW SP G G
Sbjct: 1569 QSQWNQRGSAVKNDQSESSHGW-----GPSNEQ--------NQLPSSQGWGSPNAGAGHE 1615
Query: 596 --SESQWGPPRGGFRKNRRDGG--------EWKNKNFRPPNSPGTFGD---VPAFFTATR 456
++SQWG P G +K+R +G EWKNK RP G D FTATR
Sbjct: 1616 SETQSQWGQPSG--KKSRPEGSRGWGSNNTEWKNKKNRPNKPQGPLNDDYSAGGIFTATR 1673
Query: 455 QRIDMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVLNYHPDKAS 282
QR+D+FTS+EQDI+ DV+PI+ I+RIM GYNDG LSA+DQ++I+D V N HPDKA
Sbjct: 1674 QRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAV 1733
Query: 281 KSGTGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKY 102
K GTGIDY+ V+ H +SRC YVVS+DG +EDFSY KC++NF+ KYP+ AE+F KY
Sbjct: 1734 KMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKY 1793
Query: 101 FRKPEQ-RNRERSLSVAPETPRERSVGPE 18
FR+P NRERS+ RE+SV PE
Sbjct: 1794 FRRPRAGGNRERSVIPEDGGNREQSVVPE 1822
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 217 bits (553), Expect = 6e-54
Identities = 120/265 (45%), Positives = 160/265 (60%), Gaps = 28/265 (10%)
Frame = -3
Query: 761 WTENVSTELTQQEPSQGWNTPTTGAKSSQWSHQESGTSQPKASQ------------GWDS 618
W +N + E T + W T T A + W +E+G +P Q GWDS
Sbjct: 1581 WGKNPAKENT----TSTWGTTT--ASENDWCGREAGKVEPVDLQPTKPQDDSASLSGWDS 1634
Query: 617 PIDGGGGSES--QWGPPRGG-FRKNRRDG--------GEWKNKNFRPPNSPGTFGD---V 480
P G E QWG RG +KNR +G GEWKNKN RPP SPG D +
Sbjct: 1635 PTGDGNSGERNHQWGQHRGDQTKKNRFEGARNWVSSPGEWKNKN-RPPKSPGMVNDNSTM 1693
Query: 479 PAFFTATRQRIDMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVL 306
A +T TRQR+DMFTS+EQD++ +++P++ ++RIM GYNDG LS +DQ+F++DNV
Sbjct: 1694 GALYTVTRQRLDMFTSEEQDVLSNIEPVMRSLRRIMHQSGYNDGDPLSGDDQSFVLDNVF 1753
Query: 305 NYHPDKASKSGTGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPEL 126
NYHPDKA+K G GID++ VN H +DSRC +VVS+DGR EDFSY KC+ N++ K+P+L
Sbjct: 1754 NYHPDKAAKMGCGIDHLTVNRHGSFQDSRCFFVVSTDGRTEDFSYRKCLDNYIREKFPDL 1813
Query: 125 AESFSLKYFRKPEQRNRERSLSVAP 51
AE+F KYF + R R +L P
Sbjct: 1814 AETFIGKYFSRRGNRERNPTLIQTP 1838
>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
gi|561006762|gb|ESW05756.1| hypothetical protein
PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 211 bits (538), Expect = 4e-52
Identities = 145/423 (34%), Positives = 203/423 (47%), Gaps = 51/423 (12%)
Frame = -3
Query: 1136 WGPNNDSSQPESSNDWSTQ---KSE---DWSKSIVDSQRAPQKVSNQIEFTEPGTSQGWE 975
WG N+ SN+WS + KSE S+++ DS + + + + S W
Sbjct: 1643 WGANSTGQTKSKSNEWSGRGKNKSEIPAGGSENVQDSWGSGTR--KDVTQVDTSVSGSWG 1700
Query: 974 APKKS---------GGWISNKPET---------SHDWNSPKTDELNKSVVQSPKAGG--W 855
+K GW NK E W S K L V Q +G W
Sbjct: 1701 GSRKDQTNTTSNEWAGWGRNKSEIPAGGCETVQEDSWGSGK---LKDDVTQKDNSGSGAW 1757
Query: 854 ATPKTGGWNXXXXXXXXXXXXXXXXSQKAGGWTENVSTEL-----TQQEPSQG---WNTP 699
KTG + A G +E + + + E G W P
Sbjct: 1758 GANKTG------LTKTEVDEWARNKVETADGGSEKLQEDSWNSGNLKSESKVGNASWGKP 1811
Query: 698 TTGAKSSQWSHQESGTSQPKASQGWDSPIDGGGGSES---QWGPP-RGGFRKNRRDG--- 540
+ S SH +S +Q +S+GW+S I QWG R F+KNR +G
Sbjct: 1812 NSSGSQSWDSHNQS--NQNSSSRGWESHIASANSDSEKGFQWGKQGRESFKKNRFEGSQG 1869
Query: 539 -----GEWKNKNFRPPNSPGTFGDVPAFFTATRQRIDMFTSDEQDIIKDVDPIVTPIKRI 375
G+WKN+N RPP +PG QR+D+++S+EQD++K+++PI+ I+RI
Sbjct: 1870 RGSNSGDWKNRN-RPPRTPG-------------QRLDLYSSEEQDVLKEIEPIMQSIRRI 1915
Query: 374 MR--GYNDGVRLSAEDQAFIVDNVLNYHPDKASKSGTGIDYIKVNTHEFHKDSRCLYVVS 201
M+ GYNDG L+A+DQ F+++NV +HPDK +K G GIDY+ VN H +DSRC YVV
Sbjct: 1916 MQQQGYNDGDPLAADDQLFVLENVFEHHPDKDTKMGAGIDYVMVNKHSSFQDSRCFYVVL 1975
Query: 200 SDGREEDFSYVKCIKNFVMGKYPELAESFSLKYFRKPEQRNRERSLSVAPET---PRERS 30
DGR EDFSY KC+ N++ KYPELAESF KYFRKP R + + +T PR+ +
Sbjct: 1976 KDGRREDFSYRKCLDNWIRKKYPELAESFFGKYFRKPRNRAEQTATPRGDQTAMPPRDEA 2035
Query: 29 VGP 21
P
Sbjct: 2036 ATP 2038
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 209 bits (533), Expect = 1e-51
Identities = 143/367 (38%), Positives = 194/367 (52%), Gaps = 20/367 (5%)
Frame = -3
Query: 1088 STQKSE--DWSKSIVDSQRAPQKVSNQIEFTE-----PGTSQGWEAPKKSGGWISNKPET 930
+T++SE DW S +Q V+ +E TE G S+ + K G N+
Sbjct: 1428 TTKQSEWGDWGTSKSKTQDVAAAVTGTME-TEWGDWGKGKSKTQDVSPKVDGTCVNEQTK 1486
Query: 929 SHDWNSPKTDELNKSVVQSPKAGGWATPKTGGWNXXXXXXXXXXXXXXXXSQKAGGW-TE 753
DW K D + S+ + A T W GW T+
Sbjct: 1487 LSDWGLKKNDTQDVSMEEKTFKSNGADTGTS-WGTMGKESEKPDANDALPWS---GWGTQ 1542
Query: 752 NV--STELTQQEPSQGWNTPTTGAKSSQWSHQESGTSQPKASQGWDSPIDGGGGSES--- 588
+V + L S GW + S W + ++QP +S GWD+P +G G ++S
Sbjct: 1543 DVIPTKTLDDSSKSSGWEQQKSPECSQGWGSLDE-SNQPASSNGWDTP-NGLGSTQSEKQ 1600
Query: 587 -QWGPPRGGFRKNRRDGGEWKNKNFRPPNSPGTFGD---VPAFFTATRQRIDMFTSDEQD 420
QWG RG +RR + KN P S D + A +TATRQR+DMFTS+EQD
Sbjct: 1601 HQWGQSRG----SRRWASDASKKN-HPVKSARVMNDDSSMAAMYTATRQRLDMFTSEEQD 1655
Query: 419 IIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVLNYHPDKASKSGTGIDYIKVN 246
I+ DV+P++ I++IM GYNDG LSA DQ+FI++NV +HPDKA K G G+DY+ V+
Sbjct: 1656 ILSDVEPLMQSIRKIMHQSGYNDGDPLSALDQSFILENVFTHHPDKAIKMGAGVDYVMVS 1715
Query: 245 THEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKYFRKPEQRN-RER 69
H DSRC YVVS+DGR++DFSY KC+ NF+ GKYP++A+ F KYFRKP RER
Sbjct: 1716 KHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGKYPDMADVFIAKYFRKPRFGGFRER 1775
Query: 68 SLSVAPE 48
SVAPE
Sbjct: 1776 --SVAPE 1780
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 206 bits (525), Expect = 1e-50
Identities = 135/392 (34%), Positives = 191/392 (48%), Gaps = 20/392 (5%)
Frame = -3
Query: 1136 WGPNNDSSQPESSNDWSTQKSEDWSKSIVDSQRAPQKVSNQIEFTEPGTSQGWEAPKKSG 957
WG N S++WS+ W K+ P S ++ G+ + + +K
Sbjct: 1739 WGANRTDLAKSKSSEWSS-----WGKN---KSEIPAGGSENVQNDSWGSGKLEDDTQKEN 1790
Query: 956 G---WISNKPETSHDWNSPKTDELNKSVVQSPKAGGWATPKTGGWNXXXXXXXXXXXXXX 786
W+ NK ET GG P+ WN
Sbjct: 1791 SGSAWVRNKAETID--------------------GGSEKPQEDAWN-------------- 1816
Query: 785 XXSQKAGGWTENVSTELTQQEPSQGWNTPTTGAKSSQWSHQESGTSQPKASQGWDSPIDG 606
+G W + + + W P + + SH +S +Q +SQGW+S I
Sbjct: 1817 -----SGNW------KAESKVGNASWGKPKSSESQAWDSHNQS--NQNSSSQGWESHI-A 1862
Query: 605 GGGSES----QWGPP-RGGFRKNRRDG--------GEWKNKNFRPPNSPGTFGDVPAFFT 465
SES QWG R F+KNR +G G+WKN+N RPP +PG
Sbjct: 1863 SANSESEKGFQWGKQGRDSFKKNRFEGSQGRGSNAGDWKNRN-RPPRAPG---------- 1911
Query: 464 ATRQRIDMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVLNYHPD 291
QR+D+++S EQD++KD++PI+ I+RIM+ GYNDG L+AEDQ F+++NV +HPD
Sbjct: 1912 ---QRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPD 1968
Query: 290 KASKSGTGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFS 111
K +K GTGIDY+ VN H ++SRC YVV DG +DFSY KC+ N++ KYP+LAESF
Sbjct: 1969 KETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFL 2028
Query: 110 LKYFRKPEQRNRERSLSVAPE--TPRERSVGP 21
KYFRKP R + + E TP E++ P
Sbjct: 2029 GKYFRKPRARGDQTATPGRDEAATPGEQTATP 2060
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2020
Score = 201 bits (512), Expect = 4e-49
Identities = 124/365 (33%), Positives = 180/365 (49%), Gaps = 13/365 (3%)
Frame = -3
Query: 1136 WGPNNDSSQPESSNDWSTQKSEDWSKSIVDSQRAPQKVSNQIEFTEPGTSQGWEAPKKSG 957
WG N S++WS+ W K+ + P S ++ G + + K +
Sbjct: 1689 WGANRTDLAITKSSEWSS-----WGKNKTE---IPAGGSANVQNDSWGLGKLNDTQKDNS 1740
Query: 956 GWISNKPETSHDWNSPKTDELNKSVVQSPKAGGWATPKTGGWNXXXXXXXXXXXXXXXXS 777
G + + W K + ++ GG P+ WN
Sbjct: 1741 GCGAWGENSGSAWVRNKAETID---------GGSEKPQEDAWN----------------- 1774
Query: 776 QKAGGWTENVSTELTQQEPSQGWNTPTTGAKSSQWSHQESGTSQPKASQGWDSPIDGGGG 597
+G W T W P + + SH +S +Q +SQGW+S I
Sbjct: 1775 --SGNWKAESKVGNTT------WGKPKSSESHAWDSHNQS--NQNSSSQGWESHIASANS 1824
Query: 596 SES---QWGPPRGGFRKNRRDG--------GEWKNKNFRPPNSPGTFGDVPAFFTATRQR 450
QWG R F+KNR +G G+WKN+N RPP +PG QR
Sbjct: 1825 ENEKGFQWGKGRDSFKKNRFEGSQGRGSNAGDWKNRN-RPPRAPG-------------QR 1870
Query: 449 IDMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVLNYHPDKASKS 276
+D+++S+EQD++KD++PI+ I+RIM+ GY+DG L+AEDQ F+++NV +HPDK +K
Sbjct: 1871 LDIYSSEEQDVLKDIEPIMQSIRRIMQQQGYSDGDPLAAEDQLFVLENVFEHHPDKETKM 1930
Query: 275 GTGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKYFR 96
G GIDY+ VN H ++SRC YVV DG+ +DFSY KC+ N++ KYP+LAESF KYFR
Sbjct: 1931 GAGIDYVMVNKHSSFQESRCFYVVCKDGQSKDFSYRKCLANYISKKYPDLAESFLGKYFR 1990
Query: 95 KPEQR 81
KP R
Sbjct: 1991 KPRAR 1995
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 200 bits (508), Expect = 1e-48
Identities = 137/428 (32%), Positives = 192/428 (44%), Gaps = 52/428 (12%)
Frame = -3
Query: 1139 QWGPNNDSSQPESSNDWSTQKSEDWSKSIVDSQRAPQKVSNQIEFTEPGTSQGWEAPKKS 960
QW S + S W S+ W+ +V Q + +N T G + W + K
Sbjct: 1813 QWA----SGSSQKSGAWEANPSQKWNADLV--QEDSSRSNNDESKTNSGGWKAWGSSKTE 1866
Query: 959 GGWISNKPETSHDWNSPKTDELNKSVVQSPKAGGWAT------PKTGGWNXXXXXXXXXX 798
+K W S K SPK G W PK+ W+
Sbjct: 1867 VHEGESKKVQEDSWKSQKWKAGADVTQDSPKMGSWGATKDATKPKSNDWSSWGKKKDEIH 1926
Query: 797 XXXXXXSQKAGGWT------ENVSTELTQQEPSQGWNT-------------PTTGAKSSQ 675
Q+ W+ E+ S QE S NT +S
Sbjct: 1927 DGGSEKIQE-DSWSSGKRKAESKSVADVMQEDSSKSNTWEHKSDDVKDSWDAKVPVANSS 1985
Query: 674 WSHQESGTSQP----------KASQGWDSPIDGGGGSES---QWGPP-RGGFRKNRRDG- 540
W +S +QP +S+GWDS + QWG P R F+KNR +G
Sbjct: 1986 WGKPKSQENQPWDSKNESNPTASSRGWDSQVASANSDSDKNFQWGKPGRESFKKNRFEGS 2045
Query: 539 ----------GEWKNKNFRPPNSPGTFGDVPAFFTATRQRIDMFTSDEQDIIKDVDPIVT 390
G+WKNKN RP PG R+D+++S+EQDI+KD++PIV
Sbjct: 2046 QGSQGWGSNAGDWKNKN-RPARPPG-------------PRLDLYSSEEQDILKDIEPIVQ 2091
Query: 389 PIKRIM--RGYNDGVRLSAEDQAFIVDNVLNYHPDKASKSGTGIDYIKVNTHEFHKDSRC 216
I+RIM +GYNDG L+AEDQ ++++NV +HPDK +K G GID++ V+ H ++SRC
Sbjct: 2092 SIRRIMQQQGYNDGDPLAAEDQQYVLENVFEHHPDKETKMGVGIDHVMVSRHSNFQESRC 2151
Query: 215 LYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKYFRKPEQRNRERSLSVAPETPRE 36
YVV DG++EDFSY KC+++FV KY + AESF KYFRKP + + + S +T
Sbjct: 2152 FYVVLKDGKKEDFSYRKCLESFVRKKYADTAESFCGKYFRKPRPKRDQIANSGGEQTANP 2211
Query: 35 RSVGPETP 12
TP
Sbjct: 2212 GGEQTATP 2219
>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1| Protein
DCL [Medicago truncatula]
Length = 481
Score = 194 bits (492), Expect = 8e-47
Identities = 136/408 (33%), Positives = 196/408 (48%), Gaps = 30/408 (7%)
Frame = -3
Query: 1136 WGPNNDSSQPESSNDWSTQKSE------DWSKSIVDSQRAPQKVSNQIEFTEPGTSQGWE 975
WG S S+ W +K E D S+S Q+ P+ V + P + W
Sbjct: 84 WGATKPKSNDNRSS-WGQKKDEIHVMPEDSSRSNAWEQK-PENVKDSWVAKVPVANSSWG 141
Query: 974 APK--KSGGWISNKPETSHDWNSPKTDELNKSVVQSPKAGGWATPKTGGWNXXXXXXXXX 801
K ++ W S K E ++ + P + E ++ W PK+
Sbjct: 142 KAKSPENRPWDS-KNEPNNSFGKPNSQENEPWDSKNESDSSWGKPKS------------- 187
Query: 800 XXXXXXXSQKAGGWTENVSTELTQQEPSQGWNTPTTGAKSSQWSHQESGTSQPKASQGWD 621
Q++ W ++ E + W P + S ES +Q S+GWD
Sbjct: 188 --------QESQPWD-------SKNESNSSWGKPKSQENHPWDSKNES--NQTAGSRGWD 230
Query: 620 SPIDGGGGSES----QWGPP-RGGFRKNRRDG--------GEWKNKNFRPPNSPGTFGDV 480
S + SES QWG R F+KNR +G G+WKN++ RP PG
Sbjct: 231 SQV-ASANSESDKSFQWGKQGRDSFKKNRFEGSQSGGPNAGDWKNRS-RPVRPPG----- 283
Query: 479 PAFFTATRQRIDMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVL 306
QR +++T +EQDI+KD++PIV I+RIM+ GYNDG L+ EDQ ++++NV
Sbjct: 284 --------QRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVF 335
Query: 305 NYHPDKASKSGTGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPEL 126
+HPDK +K G G+D++ V+ H +DSRCLYVV DG++EDFSY KC++N V KYPE
Sbjct: 336 EHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPET 395
Query: 125 AESFSLKYFRKPEQR-------NRERSLSVAPETPRERSVGPETPRER 3
AESF KYFRKP+ R N + AP E++ P E+
Sbjct: 396 AESFCGKYFRKPQPRVKRDQTPNPAGEQTAAPNPAGEQTAAPNPAGEQ 443
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 194 bits (492), Expect = 8e-47
Identities = 136/408 (33%), Positives = 196/408 (48%), Gaps = 30/408 (7%)
Frame = -3
Query: 1136 WGPNNDSSQPESSNDWSTQKSE------DWSKSIVDSQRAPQKVSNQIEFTEPGTSQGWE 975
WG S S+ W +K E D S+S Q+ P+ V + P + W
Sbjct: 1635 WGATKPKSNDNRSS-WGQKKDEIHVMPEDSSRSNAWEQK-PENVKDSWVAKVPVANSSWG 1692
Query: 974 APK--KSGGWISNKPETSHDWNSPKTDELNKSVVQSPKAGGWATPKTGGWNXXXXXXXXX 801
K ++ W S K E ++ + P + E ++ W PK+
Sbjct: 1693 KAKSPENRPWDS-KNEPNNSFGKPNSQENEPWDSKNESDSSWGKPKS------------- 1738
Query: 800 XXXXXXXSQKAGGWTENVSTELTQQEPSQGWNTPTTGAKSSQWSHQESGTSQPKASQGWD 621
Q++ W ++ E + W P + S ES +Q S+GWD
Sbjct: 1739 --------QESQPWD-------SKNESNSSWGKPKSQENHPWDSKNES--NQTAGSRGWD 1781
Query: 620 SPIDGGGGSES----QWGPP-RGGFRKNRRDG--------GEWKNKNFRPPNSPGTFGDV 480
S + SES QWG R F+KNR +G G+WKN++ RP PG
Sbjct: 1782 SQV-ASANSESDKSFQWGKQGRDSFKKNRFEGSQSGGPNAGDWKNRS-RPVRPPG----- 1834
Query: 479 PAFFTATRQRIDMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVL 306
QR +++T +EQDI+KD++PIV I+RIM+ GYNDG L+ EDQ ++++NV
Sbjct: 1835 --------QRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVF 1886
Query: 305 NYHPDKASKSGTGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPEL 126
+HPDK +K G G+D++ V+ H +DSRCLYVV DG++EDFSY KC++N V KYPE
Sbjct: 1887 EHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPET 1946
Query: 125 AESFSLKYFRKPEQR-------NRERSLSVAPETPRERSVGPETPRER 3
AESF KYFRKP+ R N + AP E++ P E+
Sbjct: 1947 AESFCGKYFRKPQPRVKRDQTPNPAGEQTAAPNPAGEQTAAPNPAGEQ 1994
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 190 bits (483), Expect = 8e-46
Identities = 124/386 (32%), Positives = 184/386 (47%), Gaps = 13/386 (3%)
Frame = -3
Query: 1136 WGPNNDSSQPESSNDWSTQKSEDWSKSIVDSQRAPQKVSNQIEFTEPGTSQGWEAPKKSG 957
W +D ++ + N WS E K + S ++ Q + ++ G E +
Sbjct: 1680 WNTTSDRTKTMTKNTWSGWHGEKSEKEDILSTKSQQDLPRNSDW---GAVSNRENNAERA 1736
Query: 956 GWISNKPETSHDWNSPKTDELNKSVVQSPKAGGWATPKTGGWNXXXXXXXXXXXXXXXXS 777
+K + D S D NK Q GW + GW
Sbjct: 1737 YEFVSKDQPLPDQVSEPCDWDNKLTPQKA-VSGWLSSNDEGWTKDANSSERKEPTDSPVV 1795
Query: 776 QKAGGWTENVSTELTQQEPSQGWNTPTTGAKSSQWSHQESGTSQPKASQGWDSPIDGGGG 597
+ W + S+E++Q S +N+ W P+A G G
Sbjct: 1796 YNS--WEKRTSSEISQNVESASFNS---------WL--------PRAGDG------GEVE 1830
Query: 596 SESQWGPPRGGFRKNR--------RDGGEWKNKNFRPPNSPGTFGDVPA--FFTATRQRI 447
++W G F+KN D G+WK K P P D + FT TRQR+
Sbjct: 1831 KPNEWVKKSGSFKKNHGETSGGWGSDSGDWKIKKNHPGKFPRMNNDNTSVRLFTETRQRL 1890
Query: 446 DMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDGVRLSAEDQAFIVDNVLNYHPDKASKSG 273
D+FTS+EQD + ++P + I+RIM GYNDG + EDQ+FI+DNV NYHPDKA+K G
Sbjct: 1891 DLFTSEEQDALSLIEPTMKSIRRIMHKSGYNDGDPIRPEDQSFIIDNVFNYHPDKAAKMG 1950
Query: 272 TGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKYFRK 93
+GID++ ++ H +DSRCLYVVS+DGR+EDFSY KC+ N + ++P++A+ F KYFRK
Sbjct: 1951 SGIDHLMISRHSSFQDSRCLYVVSTDGRKEDFSYRKCLGNLIKSRFPDVADEFLDKYFRK 2010
Query: 92 PEQ-RNRERSLSVAPETPRERSVGPE 18
P+ N++R + P ++ PE
Sbjct: 2011 PKPGGNQDRISTPEPAWNNTQAPTPE 2036
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 188 bits (478), Expect = 3e-45
Identities = 132/430 (30%), Positives = 196/430 (45%), Gaps = 55/430 (12%)
Frame = -3
Query: 1136 WGPNNDSSQPESSND--------------WSTQKSEDWSKSIVDSQRAPQKVSNQIEFTE 999
WG DSSQ ++ + W ++K E S V S A Q S + E
Sbjct: 1477 WGQPRDSSQKNNNENGVSSNFNRQGAGKSWDSKKKE----SNVQSSWAQQGDSTWKDSKE 1532
Query: 998 PGTSQGWEAPKKSGGWISNKP---ETSHDWNSPKTDELNKSVVQSPKAGGWATPKTGGWN 828
+S SGGW + K S W S K D PK+ +
Sbjct: 1533 ARSSVKANNSTNSGGWSTGKALVDGVSSSWGSQKEDR------PQPKSNDRSVGDGNFDK 1586
Query: 827 XXXXXXXXXXXXXXXXSQKAGGWTENVSTELTQQEPSQGWNTPTTG--AKSSQWSHQESG 654
+ W + ++ + Q + W + + KSS W +++
Sbjct: 1587 DAKEEGLSSWDAKKVERKTQSSWGQPSESKNSAQSSADHWGSDKSNQPGKSSGWGSEDTN 1646
Query: 653 TSQPKASQ-GWDSP------------IDGGGGSESQWGPPRG-GFRKNRRDGG------- 537
+ Q W + G S+S WG P G G+ K + +GG
Sbjct: 1647 AGKDSEKQDSWGKSNVSTWKKESGEKLHGSDDSQSPWGQPGGSGWNKKQPEGGRGWGSSN 1706
Query: 536 --EWKNKNF----------RPPNSPGTFGDVPAF-FTATRQRIDMFTSDEQDIIKDVDPI 396
EWK++ RPP P D P TATR+R+D F ++E+D++ +V+ +
Sbjct: 1707 TGEWKSRKNQNQNQNQNQNRPPRGPND--DSPRVALTATRKRMDEFPTEEKDVLSEVESL 1764
Query: 395 VTPIKRIMR--GYNDGVRLSAEDQAFIVDNVLNYHPDKASKSGTGIDYIKVNTHEFHKDS 222
+ I+RIM G DG L +DQ +++DN+LNYHPDKA+K G G+D+I V H ++S
Sbjct: 1765 MQSIRRIMHQSGCVDGEPLLPDDQTYLIDNILNYHPDKAAKIGAGVDFITVKKHSNFQES 1824
Query: 221 RCLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKYFRKPEQRNRERSLSVAPETP 42
RC YVVS+DG++ DFSY+KCI+ FV GKYP +AESF+ KYFR+ + R + S +P +P
Sbjct: 1825 RCFYVVSTDGKDTDFSYIKCIETFVKGKYPSVAESFTSKYFRRSQ---RPQPASPSPASP 1881
Query: 41 RERSVGPETP 12
S P +P
Sbjct: 1882 SPTSPSPASP 1891
>emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera]
Length = 1081
Score = 180 bits (457), Expect = 9e-43
Identities = 140/448 (31%), Positives = 193/448 (43%), Gaps = 77/448 (17%)
Frame = -3
Query: 1130 PNNDSSQPESSNDWSTQKSEDWSKSIVDSQRAPQKVSNQIEFTEPGTSQGWEAPKKSGGW 951
P + +Q +S W + +DW+K + S Q+ +P + W +
Sbjct: 686 PEDPLAQATTSVGWDSSTGKDWTKRKLQSPSEQQR--------DPAI-KSWSSSHNVMKE 736
Query: 950 ISNKPETSHDWNSPKTDELNKSVVQSPKAGGWATPKTGGWNXXXXXXXXXXXXXXXXSQK 771
SN+P ++H W+SP GWN ++
Sbjct: 737 QSNQPASTHGWDSPGAK---------------------GWNDV---------------EE 760
Query: 770 AGGWTENVST-ELTQQEPSQGWNTPTTGAKSSQWSHQESGTSQPKASQGWDSPIDGGGG- 597
W + S + Q E S GW G + Q +Q +SQGW SP G G
Sbjct: 761 QSQWNQRGSAVKNDQSESSHGW-----GPSNEQ--------NQLPSSQGWGSPNAGAGHE 807
Query: 596 --SESQWGPPRGGFRKNRRDGG--------EWKNKNFRPPNSPGTFGD---VPAFFTATR 456
++SQWG P G +K+R +G EWKNK RP G D FTATR
Sbjct: 808 SETQSQWGQPSG--KKSRPEGSRGWGSNNTEWKNKKNRPNKPQGPLNDDYSAGGIFTATR 865
Query: 455 QRIDMFTSDEQDIIKDVDPIVTPIKRIMR--GY--------------------------- 363
QR+D+FTS+EQDI+ DV+PI+ I+RIM GY
Sbjct: 866 QRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYLSMNLYANIFIVVAGMVKIEYLVYGQG 925
Query: 362 -----------NDGVRLSAEDQAFIVDNVLNY---------------------HPDKASK 279
+ V L ++ + +D + Y HPDKA K
Sbjct: 926 VPTLGDTKHWHSGAVSLPHSERTYKIDIGVQYNDGDPLSADDQSYILDKVFNNHPDKAVK 985
Query: 278 SGTGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFSYVKCIKNFVMGKYPELAESFSLKYF 99
GTGIDY+ V+ H +SRC YVVS+DG +EDFSY KC++NF+ KYP+ AE+F KYF
Sbjct: 986 MGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYF 1045
Query: 98 RKPEQ-RNRERSLSVAPETPRERSVGPE 18
R+P NRERS+ RE+SV PE
Sbjct: 1046 RRPRAGGNRERSVIPEDGGNREQSVVPE 1073
>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
Length = 2113
Score = 178 bits (452), Expect = 3e-42
Identities = 122/391 (31%), Positives = 180/391 (46%), Gaps = 44/391 (11%)
Frame = -3
Query: 1121 DSSQPESSNDWSTQKSE-----DWSKSIVDSQ----RAPQKVSNQIEFTEPGTSQGWEAP 969
D ++ + + W K DW+K S +A Q + + ++ +P
Sbjct: 1651 DWAKKDEQSTWGNVKKAGSDGGDWAKKDEQSTWGNVKASQIQNKSTWGRDAAPTENVSSP 1710
Query: 968 K--KSGGWISNKPETSHDWNSPKTDEL-NKSVVQSPKAGGWATPKTGGWNXXXXXXXXXX 798
K + G W S + W KT + NKS A P
Sbjct: 1711 KSQEDGLWSSAQKGEQSTWGHVKTSQTQNKSTWGGDTAPIENVPSPKSQEDGLWSSASAA 1770
Query: 797 XXXXXXSQKAGGWTENVSTELTQQEPSQGWNTPTTGAK-------------SSQWSHQES 657
S+ W V+ E EP W + + K S WS +
Sbjct: 1771 QKEQDGSKDNNPWQTKVA-EQANSEPLSTWGSSSDWVKPDSQTPTGDNTKNESPWSSSQK 1829
Query: 656 GTSQPKASQGW-DSPIDGGGGSESQ--------------WGPPRGGFRKNRRDGGEWKNK 522
+ SQGW S +D ++ Q WG G R+ + G ++
Sbjct: 1830 LLNDSTDSQGWGSSKVDTANDNDEQPQWGRGRGRGRGRGWGRGVGRGREGSQGRGPTNDR 1889
Query: 521 NFRPPNSPGTFGD--VPAFFTATRQRIDMFTSDEQDIIKDVDPIVTPIKRIMR--GYNDG 354
+++ S G D P FTA+RQR+D FT++EQ+++ + + I+ I+R+M GYNDG
Sbjct: 1890 DWKNKRSGGPVDDPNAPGIFTASRQRLDSFTAEEQEVLLETETIMKNIRRVMHQTGYNDG 1949
Query: 353 VRLSAEDQAFIVDNVLNYHPDKASKSGTGIDYIKVNTHEFHKDSRCLYVVSSDGREEDFS 174
LSA+DQ +IVDNVLN+HP+K+ K G G+D+I VN H + SRCLY V+ DG + DFS
Sbjct: 1950 DPLSADDQKYIVDNVLNHHPEKSLKIGAGLDHIMVNKHSEFQMSRCLYAVTIDGSKADFS 2009
Query: 173 YVKCIKNFVMGKYPELAESFSLKYFRKPEQR 81
Y KC+ NF+ GKYP++AESF KYF+KP+ R
Sbjct: 2010 YRKCLDNFIRGKYPDVAESFIAKYFKKPQPR 2040