BLASTX nr result
ID: Paeonia24_contig00015439
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00015439
(1236 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 251 3e-96
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 250 3e-94
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 251 4e-94
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 251 4e-94
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 247 2e-92
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 244 2e-92
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 240 2e-91
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 243 3e-91
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 244 1e-90
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 241 3e-90
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 241 3e-90
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 238 5e-90
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 237 2e-89
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 236 4e-89
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 236 4e-89
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 231 1e-88
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 231 1e-88
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 226 1e-86
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 251 2e-86
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 221 4e-86
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 251 bits (641), Expect(2) = 3e-96
Identities = 121/212 (57%), Positives = 155/212 (73%), Gaps = 2/212 (0%)
Frame = -3
Query: 907 YVYTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFT 728
+VY ++ K EV F +WK +VEK+TG+ VK +R+DNG E+ EFC + GI RH T
Sbjct: 838 WVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRT 897
Query: 727 VKGTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTP 548
V+ TPQQNGVAERMN+TL+++ARCMR +AGLSK +WAEAVNTA YL+NRSPSTAI KTP
Sbjct: 898 VRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTP 957
Query: 547 MEVWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCL--TTKK 374
EVW+G P+ Y L+IFGCPAY H+++ K+ RAMK IFLGY GVKGYRLWC T K
Sbjct: 958 QEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPK 1017
Query: 373 IVVSRDVKFDETVMANVQRFTGWDSPTENSEL 278
++SRDV FDE+ M ++ G + T ++L
Sbjct: 1018 FIISRDVTFDESAMFGQRKEFGDLAGTSKTDL 1049
Score = 129 bits (324), Expect(2) = 3e-96
Identities = 59/96 (61%), Positives = 68/96 (70%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T+LWH RLGHMSEKGL++LSKQ FCE CV GKQ R KF H T G+L
Sbjct: 745 TELWHRRLGHMSEKGLSILSKQGLLSGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGVL 804
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
+YIHSD+WGPS V S G R++VTFIDDFSR+VWVY
Sbjct: 805 EYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVY 840
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 250 bits (638), Expect(2) = 3e-94
Identities = 126/254 (49%), Positives = 171/254 (67%), Gaps = 10/254 (3%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + ++F +WK +VE+QT R VK +R+DNG ++ K +C+ GI RH+TV
Sbjct: 489 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGIVRHYTVP 548
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMNRT++ KARCM SNAGL K +WAEAV+TACYLINRSPS AI KTP++
Sbjct: 549 HTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIK 608
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+P Y +LR+FGC AY H+ K+ RA+K IFLGYP GVKGY+LWC TKK+V+S
Sbjct: 609 VWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVIS 668
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSEL-SRDVDDDQVEYIAPRTSRPIRDPESV----- 200
R+V F E+VM + D P+ N + S++ QVE++ P ++ ++
Sbjct: 669 RNVVFHESVMLH-------DKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINLDAP 721
Query: 199 ----SDSDMGQTSP 170
SDS + Q SP
Sbjct: 722 VIEDSDSSIVQQSP 735
Score = 124 bits (310), Expect(2) = 3e-94
Identities = 54/96 (56%), Positives = 66/96 (68%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 394 TNLWHMRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 453
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+R S GG R+ +T +DD+SR+VW Y
Sbjct: 454 DYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPY 489
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 251 bits (640), Expect(2) = 4e-94
Identities = 121/239 (50%), Positives = 166/239 (69%), Gaps = 1/239 (0%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + ++F +WK +VE+QT R VK +R+DNG E+ K +C+ GI RH+TV
Sbjct: 735 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVP 794
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMNRT++ KARC+ SNAGL K +WAEAV+TACYLINRSPS AI KTP+E
Sbjct: 795 HTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIE 854
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+P Y +LR+FGC AY H+ K+ RA+K IFLGYP GVKGY+LWC TKK+V+S
Sbjct: 855 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVIS 914
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSEL-SRDVDDDQVEYIAPRTSRPIRDPESVSDSD 188
R+V F E+VM + D P+ N + S++ QVE++ P ++ +++ +
Sbjct: 915 RNVVFHESVMLH-------DKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDE 966
Score = 122 bits (307), Expect(2) = 4e-94
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHM+E GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 640 TNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 699
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+R S GG R+ +T +DD+SR+VW Y
Sbjct: 700 DYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPY 735
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 251 bits (640), Expect(2) = 4e-94
Identities = 121/239 (50%), Positives = 166/239 (69%), Gaps = 1/239 (0%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + ++F +WK +VE+QT R VK +R+DNG E+ K +C+ GI RH+TV
Sbjct: 528 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVP 587
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMNRT++ KARC+ SNAGL K +WAEAV+TACYLINRSPS AI KTP+E
Sbjct: 588 HTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIE 647
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+P Y +LR+FGC AY H+ K+ RA+K IFLGYP GVKGY+LWC TKK+V+S
Sbjct: 648 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVIS 707
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSEL-SRDVDDDQVEYIAPRTSRPIRDPESVSDSD 188
R+V F E+VM + D P+ N + S++ QVE++ P ++ +++ +
Sbjct: 708 RNVVFHESVMLH-------DKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDE 759
Score = 122 bits (307), Expect(2) = 4e-94
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHM+E GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 433 TNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 492
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+R S GG R+ +T +DD+SR+VW Y
Sbjct: 493 DYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPY 528
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 247 bits (630), Expect(2) = 2e-92
Identities = 125/256 (48%), Positives = 169/256 (66%), Gaps = 10/256 (3%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + ++F +WK +VE+QT R VK +R DNG E+ K +C+ GI RH+TV
Sbjct: 349 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRPDNGMEFCSKIFKSYCKSEGIVRHYTVP 408
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMNRT++ KARCM SNAGL K +WAEAV+TACYLINRSPS AI KTP+E
Sbjct: 409 HTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIE 468
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+ +P Y +LR+F C AY H+ K+ RA+K IFLGYP GVKGY+LWC TKK+V++
Sbjct: 469 VWSSSPAKYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVIN 528
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSEL-SRDVDDDQVEYIAPRTSRPIRDPESV----- 200
R+V F E+VM + D P+ N + S++ QVE++ P ++ ++
Sbjct: 529 RNVVFHESVMLH-------DKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDAP 581
Query: 199 ----SDSDMGQTSPSQ 164
SDS + Q SP +
Sbjct: 582 VIEDSDSSIVQQSPKR 597
Score = 121 bits (303), Expect(2) = 2e-92
Identities = 54/96 (56%), Positives = 65/96 (67%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 254 TNLWHMRLGHMSEIGLAELSKRGMLDGQSIGKLIFCEHCIFGKHHRVKFNTSTHTTEGIL 313
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+ S GG R+ +T IDD+SR+VW Y
Sbjct: 314 DYVHSDLWGPTCKTSFGGARYMMTIIDDYSRKVWPY 349
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 244 bits (622), Expect(2) = 2e-92
Identities = 124/256 (48%), Positives = 168/256 (65%), Gaps = 10/256 (3%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + ++F +WK +VE+QT R VK +R+DNG E K +C+ GI RH+TV
Sbjct: 437 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVP 496
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMNRT++ KARCM SNA L K +WAEAV+TACYLINRSPS AI KTP+E
Sbjct: 497 HTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIE 556
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+P Y +LR+FGC AY H+ K+ R +K IFLGY GVKGY+LWC TKK+V+S
Sbjct: 557 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVIS 616
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSEL-SRDVDDDQVEYIAPRTSRPIRDPESV----- 200
R+V F E++M + D P+ N + S++ QVE++ P ++ ++
Sbjct: 617 RNVVFHESIMLH-------DKPSTNVPVESQEKVSVQVEHLISSGHAPEKEDVAINQDAP 669
Query: 199 ----SDSDMGQTSPSQ 164
SDS + Q SP +
Sbjct: 670 VIEDSDSSIVQQSPKR 685
Score = 124 bits (310), Expect(2) = 2e-92
Identities = 54/96 (56%), Positives = 66/96 (68%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 342 TNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 401
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+R S GG R+ +T +DD+SR+VW Y
Sbjct: 402 DYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPY 437
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 240 bits (613), Expect(2) = 2e-91
Identities = 126/271 (46%), Positives = 173/271 (63%), Gaps = 10/271 (3%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + +F +WK +VE+QT R VK +R+DNG E+ K +C+ GI RH+TV
Sbjct: 528 YFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVP 587
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMNR ++ KARCM SNAGL K +WAEAV+TACYLINRSPS A KTP+E
Sbjct: 588 HTPQQNGVAERMNRIIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYA-NKKTPIE 646
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+P Y +L++FGC AY H+ K+ RA+K IFLGYP VKGY+LWC TKK+V+S
Sbjct: 647 VWSGSPANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLWCPETKKVVIS 706
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSEL-SRDVDDDQVEYIAPRTSRPIRDPESV----- 200
R+V F E++M + D P+ N + S++ QVE++ P ++ ++
Sbjct: 707 RNVVFHESIMLH-------DKPSTNVPVESQEKASVQVEHLINSGHAPEKEDVAINQDAP 759
Query: 199 ----SDSDMGQTSPSQGEISTDLEDNGTDLD 119
SDS Q SP + I+ D +L+
Sbjct: 760 VIEDSDSSTVQQSPKR-SIAKDKPKRNKELE 789
Score = 124 bits (310), Expect(2) = 2e-91
Identities = 54/96 (56%), Positives = 66/96 (68%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 433 TNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 492
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+R S GG R+ +T +DD+SR+VW Y
Sbjct: 493 DYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPY 528
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 243 bits (620), Expect(2) = 3e-91
Identities = 122/250 (48%), Positives = 162/250 (64%), Gaps = 6/250 (2%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K E +F +WK +VE+QT R VK +R+DNG E+ K +C GI RH+TV
Sbjct: 467 YFLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFKSYCRSEGIVRHYTVS 526
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGV ERMNRT++ KARCM SNAGL + +WAEA +TACYLINRSPS AI KTP+E
Sbjct: 527 HTPQQNGVVERMNRTIISKARCMLSNAGLPRRFWAEAASTACYLINRSPSYAIDKKTPIE 586
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
+W+G+P Y +L++FGC AY H+ K+ RA+K IFLGYP GVK Y+LWC T+K+V+S
Sbjct: 587 MWSGSPANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKAYKLWCPETQKVVIS 646
Query: 361 RDVKFDETVMANVQRFTG------WDSPTENSELSRDVDDDQVEYIAPRTSRPIRDPESV 200
R+V F+ETVM N + T + + L V + E IA P+ +
Sbjct: 647 RNVIFNETVMLNDKSSTNVPVKSQQKASVQVEHLISSVHVPEKENIASNQDAPVIEE--- 703
Query: 199 SDSDMGQTSP 170
SDS + + SP
Sbjct: 704 SDSSVVEQSP 713
Score = 120 bits (302), Expect(2) = 3e-91
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
+ LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 372 SDLWHMRLGHMSEIGLAELSKRGLLDGQNIGKLKFCEHCIFGKHKRVKFTTSTHTTEGIL 431
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+R S GG R+ +T +DD+SR+VW Y
Sbjct: 432 DYVHSDLWGPARKRSFGGARYMMTIVDDYSRKVWPY 467
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 244 bits (623), Expect(2) = 1e-90
Identities = 118/255 (46%), Positives = 167/255 (65%), Gaps = 3/255 (1%)
Frame = -3
Query: 907 YVYTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFT 728
++Y ++ K + E F WK+LVE Q+ +K +R+DNG E+ +E+C++HGI RH T
Sbjct: 516 WIYILKIKDQALEKFKVWKSLVENQSDFKLKCLRTDNGLEFCSKVFEEYCQKHGIKRHKT 575
Query: 727 VKGTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTP 548
V+ TPQQNG+AERMNRTL++K RCM N+ L + +WAEAVNTA YL+NRSPS+AIG KTP
Sbjct: 576 VRFTPQQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYLVNRSPSSAIGFKTP 635
Query: 547 MEVWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIV 368
E+W G P Y NLR+FGCPAY HI + K+ RA+K +F+GYP+GVKGY++WC K +
Sbjct: 636 EELWNGKPANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYKIWCKDQGKCI 695
Query: 367 VSRDVKFDETVM--ANVQRFTG-WDSPTENSELSRDVDDDQVEYIAPRTSRPIRDPESVS 197
VSRDV F E+V+ + + G D+P N + VE + ++S + E+ S
Sbjct: 696 VSRDVVFHESVLLKESAEHDAGLQDNPAANKRSGSETSKVNVELLTDKSS----EKEAAS 751
Query: 196 DSDMGQTSPSQGEIS 152
D + + E+S
Sbjct: 752 DDERATAESEEHEVS 766
Score = 117 bits (293), Expect(2) = 1e-90
Identities = 55/109 (50%), Positives = 74/109 (67%)
Frame = -1
Query: 1230 VSQVDEKRYLQTQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKF 1051
VS V E+ +T+LWH+RLGHMS KGL LSKQ +FCE+C+FGK R+KF
Sbjct: 414 VSAVSEED--RTKLWHLRLGHMSIKGLQELSKQGLLGGDRIQQLEFCENCIFGKSHRSKF 471
Query: 1050 GNAEHRTKGILDYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVYTM 904
EH +K +LDY H D WGP++V S G R+F++ IDD+SR+VW+Y +
Sbjct: 472 NKGEHMSKQVLDYAHIDHWGPAQVPSLSGGRYFMSLIDDYSRKVWIYIL 520
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 241 bits (614), Expect(2) = 3e-90
Identities = 114/207 (55%), Positives = 149/207 (71%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + +F +WK +VE+QT R VK +R+DNG E+ K +C+ GI RH+TV
Sbjct: 513 YFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVP 572
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMNRT++ KARCM SNAGL K +WAEAV+TACYLINRSP AI KTP++
Sbjct: 573 HTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIK 632
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+P Y +L++FGC AY H+ K+ R +K IFLGYP GVKGY+LWC TKK+V+S
Sbjct: 633 VWSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWCPETKKVVIS 692
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSE 281
R V F E+VM + + T + P E+ E
Sbjct: 693 RYVVFHESVMLHDKPST--NIPVESQE 717
Score = 119 bits (299), Expect(2) = 3e-90
Identities = 52/96 (54%), Positives = 65/96 (67%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LS + FCEHC+FGK R KF + H T+GIL
Sbjct: 418 TNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 477
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+R S GG R+ +T ++D+SR+VW Y
Sbjct: 478 DYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPY 513
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 241 bits (614), Expect(2) = 3e-90
Identities = 114/207 (55%), Positives = 149/207 (71%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + +F +WK +VE+QT R VK +R+DNG E+ K +C+ GI RH+TV
Sbjct: 345 YFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVP 404
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMNRT++ KARCM SNAGL K +WAEAV+TACYLINRSP AI KTP++
Sbjct: 405 HTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIK 464
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+P Y +L++FGC AY H+ K+ R +K IFLGYP GVKGY+LWC TKK+V+S
Sbjct: 465 VWSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWCPETKKVVIS 524
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSE 281
R V F E+VM + + T + P E+ E
Sbjct: 525 RYVVFHESVMLHDKPST--NIPVESQE 549
Score = 119 bits (299), Expect(2) = 3e-90
Identities = 52/96 (54%), Positives = 65/96 (67%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LS + FCEHC+FGK R KF + H T+GIL
Sbjct: 250 TNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 309
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+R S GG R+ +T ++D+SR+VW Y
Sbjct: 310 DYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPY 345
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 238 bits (606), Expect(2) = 5e-90
Identities = 122/256 (47%), Positives = 166/256 (64%), Gaps = 10/256 (3%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + + F +WK +VE+QT R VK +R+DNG E+ K +C+ GI H+T
Sbjct: 500 YFLKHKYQAFDGFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVCHYTAP 559
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQN VAERMNRT++ KARCM SNAGL K +WAEAV+TACYLINRSP AI KTP+E
Sbjct: 560 HTPQQNDVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIE 619
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+PT Y +LR+FGC AY H+ K+ RA+K IFLGY GVKGY+LWC TKK+V+S
Sbjct: 620 VWSGSPTNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYASGVKGYKLWCPETKKVVIS 679
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSEL-SRDVDDDQVEYIAPRTSRPIRDPESV----- 200
R+V F E+V+ + D P+ N + S++ QVE++ P ++ ++
Sbjct: 680 RNVVFHESVILH-------DKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDAP 732
Query: 199 ----SDSDMGQTSPSQ 164
SDS + SP +
Sbjct: 733 VIEDSDSSIVHQSPKR 748
Score = 122 bits (305), Expect(2) = 5e-90
Identities = 53/96 (55%), Positives = 65/96 (67%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 405 TNLWHMRLGHMSEIGLAELSKRGLLDGQSIRKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 464
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+ S GG R+ +T +DD+SR+VW Y
Sbjct: 465 DYVHSDLWGPAHKTSFGGARYMMTIVDDYSRKVWPY 500
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 237 bits (604), Expect(2) = 2e-89
Identities = 116/221 (52%), Positives = 155/221 (70%), Gaps = 1/221 (0%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + ++F +WK +V+KQT R VK +R+DNG E K +C+ GI RH+TV
Sbjct: 563 YFLKHKYQAFDVFKEWKTMVKKQTERKVKILRTDNGMELCSKIFKSYCKCEGIVRHYTVP 622
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERM RT++ K+RCM GL K +WAEAV+TACYLINRSPS AI KTP+E
Sbjct: 623 HTPQQNGVAERMKRTIISKSRCMLPYVGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIE 682
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+P Y +LR+FGC AY H+ K+ RA+K IFLGYP GVKGY+LWC TKK+V+S
Sbjct: 683 VWSGSPANYSDLRVFGCIAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVIS 742
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSEL-SRDVDDDQVEYI 242
R+V F E+VM +D+P+ N + S++ QVE++
Sbjct: 743 RNVVFHESVML-------YDNPSTNVPVESQEKASVQVEHL 776
Score = 121 bits (303), Expect(2) = 2e-89
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 468 TNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHNRVKFNTSTHTTEGIL 527
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HS++WGP+R S GG R+ +T +DD+SR+VW Y
Sbjct: 528 DYVHSNLWGPARKTSFGGARYMMTTVDDYSRKVWSY 563
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 236 bits (601), Expect(2) = 4e-89
Identities = 114/236 (48%), Positives = 159/236 (67%), Gaps = 1/236 (0%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + ++F +WK +VE+QT + VK +R+DNG E+ K +C+ GI H+TV
Sbjct: 563 YFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVP 622
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMN ++ KARCM SNA L K +WAEAV+T CYLINRSPS A KTP+E
Sbjct: 623 HTPQQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIE 682
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+P Y +LR+FGC AY H+ K+ RA+K IFLGYP GVKGY+LWC TKK+V+S
Sbjct: 683 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVIS 742
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSEL-SRDVDDDQVEYIAPRTSRPIRDPESVS 197
R+V F E+V+ + D P+ N + S++ QVE++ P ++ +++
Sbjct: 743 RNVVFHESVILH-------DKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAIN 791
Score = 120 bits (302), Expect(2) = 4e-89
Identities = 53/96 (55%), Positives = 65/96 (67%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 468 TNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 527
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+ S GG R+ +T +DD+SR+VW Y
Sbjct: 528 DYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPY 563
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 236 bits (601), Expect(2) = 4e-89
Identities = 114/236 (48%), Positives = 159/236 (67%), Gaps = 1/236 (0%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + ++F +WK +VE+QT + VK +R+DNG E+ K +C+ GI H+TV
Sbjct: 563 YFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVP 622
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMN ++ KARCM SNA L K +WAEAV+T CYLINRSPS A KTP+E
Sbjct: 623 HTPQQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIE 682
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G+P Y +LR+FGC AY H+ K+ RA+K IFLGYP GVKGY+LWC TKK+V+S
Sbjct: 683 VWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVIS 742
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSEL-SRDVDDDQVEYIAPRTSRPIRDPESVS 197
R+V F E+V+ + D P+ N + S++ QVE++ P ++ +++
Sbjct: 743 RNVVFHESVILH-------DKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAIN 791
Score = 120 bits (302), Expect(2) = 4e-89
Identities = 53/96 (55%), Positives = 65/96 (67%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 468 TNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 527
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+ S GG R+ +T +DD+SR+VW Y
Sbjct: 528 DYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPY 563
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 231 bits (590), Expect(2) = 1e-88
Identities = 112/207 (54%), Positives = 147/207 (71%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + ++F +WK +VE+QT R VK +R+DNG E+ K +C+ GI RH+T
Sbjct: 360 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYT-- 417
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
PQQNGVAERMNRT++ KARCM SNAGL K +WA AV+T CYLINRSPS AI KTP++
Sbjct: 418 --PQQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIK 475
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G P Y +LR+FGC AY H+ K+ RA+K IFLGY GVKGY+LWC TKK+V+S
Sbjct: 476 VWSGFPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKVVIS 535
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSE 281
R+V F E+VM + + T + P E+ E
Sbjct: 536 RNVVFHESVMLHDKPST--NVPVESQE 560
Score = 124 bits (310), Expect(2) = 1e-88
Identities = 54/96 (56%), Positives = 66/96 (68%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 265 TNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 324
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+R S GG R+ +T +DD+SR+VW Y
Sbjct: 325 DYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPY 360
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 231 bits (590), Expect(2) = 1e-88
Identities = 112/207 (54%), Positives = 147/207 (71%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + ++F +WK +VE+QT R VK +R+DNG E+ K +C+ GI RH+T
Sbjct: 360 YFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYT-- 417
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
PQQNGVAERMNRT++ KARCM SNAGL K +WA AV+T CYLINRSPS AI KTP++
Sbjct: 418 --PQQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIK 475
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G P Y +LR+FGC AY H+ K+ RA+K IFLGY GVKGY+LWC TKK+V+S
Sbjct: 476 VWSGFPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKVVIS 535
Query: 361 RDVKFDETVMANVQRFTGWDSPTENSE 281
R+V F E+VM + + T + P E+ E
Sbjct: 536 RNVVFHESVMLHDKPST--NVPVESQE 560
Score = 124 bits (310), Expect(2) = 1e-88
Identities = 54/96 (56%), Positives = 66/96 (68%)
Frame = -1
Query: 1197 TQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGIL 1018
T LWHMRLGHMSE GL LSK+ FCEHC+FGK R KF + H T+GIL
Sbjct: 265 TNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGIL 324
Query: 1017 DYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
DY+HSD+WGP+R S GG R+ +T +DD+SR+VW Y
Sbjct: 325 DYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPY 360
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 226 bits (575), Expect(2) = 1e-86
Identities = 102/192 (53%), Positives = 136/192 (70%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + F +WK ++E+QT + VK +R+DN GE+ D ++C + GI RH T+
Sbjct: 521 YFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHTIP 580
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMNRT++ KARCM SNA ++K +WAEA NTACYLINRSPS + KTP+E
Sbjct: 581 YTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIE 640
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
+W+G P Y LR+FGC AY H+ +K+ RA+K +FLGY GVKGY+LW T K +S
Sbjct: 641 IWSGMPADYSQLRVFGCTAYAHVDNEKLEPRAIKCLFLGYGLGVKGYKLWNPETNKTFMS 700
Query: 361 RDVKFDETVMAN 326
R V F+E+VM N
Sbjct: 701 RSVVFNESVMFN 712
Score = 122 bits (307), Expect(2) = 1e-86
Identities = 55/97 (56%), Positives = 66/97 (68%)
Frame = -1
Query: 1200 QTQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGI 1021
+T LWHMRLGHMSE G+ L K+ FCE CVFGK R KF + HRTKGI
Sbjct: 425 KTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCERCVFGKHKRVKFNTSVHRTKGI 484
Query: 1020 LDYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
LDY+H+D+WGPSR S GG R+ +T IDD+SR+VW Y
Sbjct: 485 LDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPY 521
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 251 bits (641), Expect(2) = 2e-86
Identities = 121/212 (57%), Positives = 155/212 (73%), Gaps = 2/212 (0%)
Frame = -3
Query: 907 YVYTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFT 728
+VY ++ K EV F +WK +VEK+TG+ VK +R+DNG E+ EFC + GI RH T
Sbjct: 625 WVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRT 684
Query: 727 VKGTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTP 548
V+ TPQQNGVAERMN+TL+++ARCMR +AGLSK +WAEAVNTA YL+NRSPSTAI KTP
Sbjct: 685 VRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTP 744
Query: 547 MEVWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCL--TTKK 374
EVW+G P+ Y L+IFGCPAY H+++ K+ RAMK IFLGY GVKGYRLWC T K
Sbjct: 745 QEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPK 804
Query: 373 IVVSRDVKFDETVMANVQRFTGWDSPTENSEL 278
++SRDV FDE+ M ++ G + T ++L
Sbjct: 805 FIISRDVTFDESAMFGQRKEFGDLAGTSKTDL 836
Score = 96.7 bits (239), Expect(2) = 2e-86
Identities = 49/102 (48%), Positives = 59/102 (57%)
Frame = -1
Query: 1215 EKRYLQTQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEH 1036
EK+ T+LWH RLGHMSEKGL++L KF H
Sbjct: 552 EKKDNCTELWHRRLGHMSEKGLSILE--------------------------VKFSMGSH 585
Query: 1035 RTKGILDYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
T G+L+YIHSD+WGPS V S G R++VTFIDDFSR+VWVY
Sbjct: 586 TTNGVLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVY 627
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 221 bits (564), Expect(2) = 4e-86
Identities = 107/226 (47%), Positives = 146/226 (64%), Gaps = 6/226 (2%)
Frame = -3
Query: 901 YTMRQKSEVREIFIKWKALVEKQTGRAVKRIRSDNGGEYTEDPLKEFCEQHGIARHFTVK 722
Y ++ K + F +WK ++++QT + VK +R+DNGG + D ++C + GI H T+
Sbjct: 416 YFLKHKDDTFAAFKEWKVMIKRQTEKEVKVLRTDNGGGFCSDAFDDYCRKEGIVMHHTIP 475
Query: 721 GTPQQNGVAERMNRTLLEKARCMRSNAGLSKFWWAEAVNTACYLINRSPSTAIGLKTPME 542
TPQQNGVAERMNRT++ KARCM SNA ++K +WAEA TACYLINRSPS ++ KTP+E
Sbjct: 476 YTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAAKTACYLINRSPSISLNKKTPIE 535
Query: 541 VWTGTPTTYDNLRIFGCPAYYHITEDKIGKRAMKSIFLGYPEGVKGYRLWCLTTKKIVVS 362
VW+G P Y LR+FGC AY H+ K+ RA+K +FLGY GVKGY+LW T K +S
Sbjct: 536 VWSGMPANYSQLRVFGCTAYAHVNNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNKTFMS 595
Query: 361 RDVKFDETVMANVQRFT-----GWDSPTENSELS-RDVDDDQVEYI 242
R V F+E+VM N T G+D + + VDD + E +
Sbjct: 596 RSVVFNESVMFNDSLPTDVIPGGFDEEQQYVSVQVEHVDDQKTEIV 641
Score = 125 bits (313), Expect(2) = 4e-86
Identities = 55/97 (56%), Positives = 67/97 (69%)
Frame = -1
Query: 1200 QTQLWHMRLGHMSEKGLTVLSKQXXXXXXXXXXXDFCEHCVFGKQCRTKFGNAEHRTKGI 1021
+T +WHMRLGHMSE G+ L K+ FCEHCVFGK R KF + HRTKGI
Sbjct: 320 KTNMWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGI 379
Query: 1020 LDYIHSDVWGPSRVISQGGKRWFVTFIDDFSRRVWVY 910
LDY+H+D+WGPSR S GG R+ +T IDD+SR+VW Y
Sbjct: 380 LDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPY 416