BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00015137
         (412 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   196   3e-48
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              188   8e-46
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   188   8e-46
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   182   3e-44
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...   179   3e-43
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   177   1e-42
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   172   3e-41
gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Mor...   171   1e-40
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise...   171   1e-40
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   170   2e-40
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   170   2e-40
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   168   6e-40
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr...   167   1e-39
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus...   163   3e-38
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps...   162   5e-38
ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, part...   162   5e-38
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas...   160   1e-37
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab...   160   1e-37
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar...   160   2e-37
ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana...   160   2e-37

>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
           gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
           [Theobroma cacao]
          Length = 1395

 Score =  196 bits (498), Expect = 3e-48
 Identities = 94/141 (66%), Positives = 111/141 (78%), Gaps = 4/141 (2%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YYD   +PIE GLLD RMGP NK+G+CATCHG+F  CPGH+GYLSLALPVYNVGYL+TI+
Sbjct: 45  YYDPKSRPIEGGLLDPRMGPANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTIL 104

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKI-AQKKTDLQKIIKKIC---MSQGAKRCF 349
           DILKCICKSCSRI+L E+  +DYL+RMR+ KI A KK D+ K I K C    S  A +C+
Sbjct: 105 DILKCICKSCSRIILDEKLCKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSKAVKCW 164

Query: 350 RCGYVNGNVKKATGMVGIFHE 412
           RCGYVNG VKKA  M+GI H+
Sbjct: 165 RCGYVNGTVKKAVAMLGIIHD 185


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  188 bits (477), Expect = 8e-46
 Identities = 91/142 (64%), Positives = 112/142 (78%), Gaps = 5/142 (3%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YYD ++KPIE+GLLD RMGP NKNG CATC G+F  CPGH GYL+LALPVYNVGYL+TIV
Sbjct: 47  YYDANRKPIENGLLDPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIV 106

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKI-AQKKTDLQKIIKKIC----MSQGAKRC 346
           DILKCICKSCSR+LL E+  +DYL++MR+QK+ A KK +L K I + C     S+ A +C
Sbjct: 107 DILKCICKSCSRVLLDEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKC 166

Query: 347 FRCGYVNGNVKKATGMVGIFHE 412
            RCGY+NG VKKA  ++GI H+
Sbjct: 167 SRCGYMNGIVKKAVSVLGIIHD 188


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
           vinifera]
          Length = 1383

 Score =  188 bits (477), Expect = 8e-46
 Identities = 91/142 (64%), Positives = 112/142 (78%), Gaps = 5/142 (3%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YYD ++KPIE+GLLD RMGP NKNG CATC G+F  CPGH GYL+LALPVYNVGYL+TIV
Sbjct: 47  YYDANRKPIENGLLDPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIV 106

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKI-AQKKTDLQKIIKKIC----MSQGAKRC 346
           DILKCICKSCSR+LL E+  +DYL++MR+QK+ A KK +L K I + C     S+ A +C
Sbjct: 107 DILKCICKSCSRVLLDEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKC 166

Query: 347 FRCGYVNGNVKKATGMVGIFHE 412
            RCGY+NG VKKA  ++GI H+
Sbjct: 167 SRCGYMNGIVKKAVSVLGIIHD 188


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X1 [Citrus sinensis]
           gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc1-like isoform X2 [Citrus
           sinensis]
          Length = 1404

 Score =  182 bits (463), Expect = 3e-44
 Identities = 87/140 (62%), Positives = 108/140 (77%), Gaps = 3/140 (2%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YY  ++ PIE GLLD RMGP NK+  CATCHG F+ CPGH+GYL+LALPVYNVGYL+TI+
Sbjct: 54  YYSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTIL 113

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKI-AQKKTDLQKIIKKIC--MSQGAKRCFR 352
           DILKCICK CSR+LL E+  +DYL++MR  K+ A +KTDL K I K C  M+  A +C R
Sbjct: 114 DILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPR 173

Query: 353 CGYVNGNVKKATGMVGIFHE 412
           CGY+NG VKKA  ++GI H+
Sbjct: 174 CGYINGMVKKAVAVLGIIHD 193


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 1394

 Score =  179 bits (455), Expect = 3e-43
 Identities = 87/141 (61%), Positives = 104/141 (73%), Gaps = 4/141 (2%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YYD +KK I  GLLD+RMG PNK+G C TC G FT CPGHFGYL+L LPVYNVGYL+TI+
Sbjct: 50  YYDANKKAIVGGLLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTIL 109

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKIAQ-KKTDLQKIIKKICMSQG---AKRCF 349
           DILKCICKSCSR+L+ E+ R+ YL+RMR  +    KK +L K I K C S     A +C 
Sbjct: 110 DILKCICKSCSRVLVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSKAVKCL 169

Query: 350 RCGYVNGNVKKATGMVGIFHE 412
           RCGY+NG VKKA  +VGI H+
Sbjct: 170 RCGYMNGMVKKAGSVVGIIHD 190


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Cucumis sativus]
          Length = 1400

 Score =  177 bits (449), Expect = 1e-42
 Identities = 86/141 (60%), Positives = 108/141 (76%), Gaps = 5/141 (3%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YYD ++KPI+ GLLD RMGP NK  +CATCH +F  CPGH+GY++LALPV+NVGY  TI+
Sbjct: 51  YYDTTRKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTIL 110

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKI-AQKKTDLQKIIKKIC--MSQGAK--RC 346
           +ILKCICKSCSRILL E+  +D+LR+MR  K+ A +K DL K I K C  ++ G K  RC
Sbjct: 111 EILKCICKSCSRILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRC 170

Query: 347 FRCGYVNGNVKKATGMVGIFH 409
            RCGY+NG+VKKA  M+GI H
Sbjct: 171 SRCGYLNGSVKKAVSMLGILH 191


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
           gi|557526635|gb|ESR37941.1| hypothetical protein
           CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  172 bits (437), Expect = 3e-41
 Identities = 87/155 (56%), Positives = 108/155 (69%), Gaps = 18/155 (11%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRM---------------GPPNKNGRCATCHGDFTKCPGHFGYLS 136
           YY  ++ PIE GLLD RM               GP NK+  CATCHG F+ CPGH+GYL+
Sbjct: 54  YYSSNRVPIEGGLLDPRMEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLT 113

Query: 137 LALPVYNVGYLNTIVDILKCICKSCSRILLAEEPRRDYLRRMRTQKI-AQKKTDLQKIIK 313
           LALPVYNVGYL+TI+DILKCICK CSR+LL E+  +DYL++MR  K+ A +KTDL K I 
Sbjct: 114 LALPVYNVGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIV 173

Query: 314 KIC--MSQGAKRCFRCGYVNGNVKKATGMVGIFHE 412
           K C  M+  A +C RCGY+NG VKKA  ++GI H+
Sbjct: 174 KKCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHD 208


>gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
          Length = 232

 Score =  171 bits (433), Expect = 1e-40
 Identities = 80/124 (64%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YYD ++KP+E GLLD RMGP NK   CATCHG F+ CPGH+GYL LALPVYNVGYL+TI+
Sbjct: 53  YYDPNRKPVEDGLLDPRMGPANKFSECATCHGRFSDCPGHYGYLKLALPVYNVGYLSTIL 112

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKIAQ-KKTDLQKIIKKICMSQGAKRCFRCG 358
           DILKCICKSCSRILL E+ R+D+L++MR+ K+   KK +L K I K C S+  K C +CG
Sbjct: 113 DILKCICKSCSRILLDEKLRKDFLKKMRSSKMEPLKKGELMKKIVKKCNSKAVK-CSKCG 171

Query: 359 YVNG 370
           Y+NG
Sbjct: 172 YING 175


>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
          Length = 1368

 Score =  171 bits (433), Expect = 1e-40
 Identities = 80/133 (60%), Positives = 100/133 (75%), Gaps = 5/133 (3%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YYD +KKP+ +GLLD RMGPPNK   C TCHG+F +CPGH+GYL+LALPVYNVGYL+ IV
Sbjct: 43  YYDANKKPVSNGLLDMRMGPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIV 102

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKIAQ-KKTDLQKIIKKICMSQGAK----RC 346
           DILKCICK+CSR+LL E+    +LR+MR  ++   KKTDL K I K C S+       +C
Sbjct: 103 DILKCICKNCSRVLLEEKEHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLAKC 162

Query: 347 FRCGYVNGNVKKA 385
            RCG++NG VK+A
Sbjct: 163 PRCGHINGMVKRA 175


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X2 [Solanum tuberosum]
          Length = 1243

 Score =  170 bits (431), Expect = 2e-40
 Identities = 82/132 (62%), Positives = 101/132 (76%), Gaps = 5/132 (3%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YY+ +KKPI++GLLD RMGPPNKNG C TCHG+F +CPGH+GYL LALPVYNVGYL T+V
Sbjct: 50  YYESTKKPIQNGLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVV 109

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKIA-QKKTDLQKIIKKIC--MSQGAK--RC 346
           DILKCICK CS ILL ++ RRD L++MR  +    KK++L K + K C  M+ G K   C
Sbjct: 110 DILKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATC 169

Query: 347 FRCGYVNGNVKK 382
            +CGY+NG VKK
Sbjct: 170 SKCGYMNGMVKK 181


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X1 [Solanum tuberosum]
          Length = 1394

 Score =  170 bits (431), Expect = 2e-40
 Identities = 82/132 (62%), Positives = 101/132 (76%), Gaps = 5/132 (3%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YY+ +KKPI++GLLD RMGPPNKNG C TCHG+F +CPGH+GYL LALPVYNVGYL T+V
Sbjct: 50  YYESTKKPIQNGLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVV 109

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKIA-QKKTDLQKIIKKIC--MSQGAK--RC 346
           DILKCICK CS ILL ++ RRD L++MR  +    KK++L K + K C  M+ G K   C
Sbjct: 110 DILKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATC 169

Query: 347 FRCGYVNGNVKK 382
            +CGY+NG VKK
Sbjct: 170 SKCGYMNGMVKK 181


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Solanum lycopersicum]
          Length = 1390

 Score =  168 bits (426), Expect = 6e-40
 Identities = 81/132 (61%), Positives = 101/132 (76%), Gaps = 5/132 (3%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YY+ +KKPI++GLLD RMGPPNK+G C TCHG+F +CPGH+GYL LALPVYNVGYL T+V
Sbjct: 50  YYESTKKPIQNGLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVV 109

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKIA-QKKTDLQKIIKKIC--MSQGAK--RC 346
           DILKCICK CS ILL ++ RRD L++MR  +    KK++L K + K C  M+ G K   C
Sbjct: 110 DILKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATC 169

Query: 347 FRCGYVNGNVKK 382
            +CGY+NG VKK
Sbjct: 170 SKCGYMNGMVKK 181


>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
           gi|557101978|gb|ESQ42341.1| hypothetical protein
           EUTSA_v10012446mg [Eutrema salsugineum]
          Length = 1375

 Score =  167 bits (424), Expect = 1e-39
 Identities = 81/144 (56%), Positives = 100/144 (69%), Gaps = 7/144 (4%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YY+ + KP+E GLLD RMGPPNK   CATCH DF  CPGHFGYL L LPVYNVG+LN I+
Sbjct: 49  YYESNFKPVEGGLLDPRMGPPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYIL 108

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKIAQ-KKTDLQKIIKKICMSQGAKR---CF 349
           DILKCICK CS IL+ E+   D+L++MR  K+   KKT+L K + K C    ++R   C 
Sbjct: 109 DILKCICKRCSNILIDEKLYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMMASQRIITCK 168

Query: 350 RCGYVNGNVKKAT---GMVGIFHE 412
            CGY+NG VKK     G++GI H+
Sbjct: 169 NCGYLNGMVKKVAAQMGIIGISHD 192


>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
          Length = 1394

 Score =  163 bits (412), Expect = 3e-38
 Identities = 80/142 (56%), Positives = 104/142 (73%), Gaps = 5/142 (3%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YYD+++KPI++GLLD RMGP NK+  C TC G F  CPGH+GYL LALPVYNVG+  TI+
Sbjct: 49  YYDENRKPIDNGLLDQRMGPANKSILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTII 108

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKI-AQKKTDLQKIIKKICMS-QGAKR---C 346
           DILKCICK+CSR+LLA++  + +L++MR  K    KK ++QK + K C S  G+KR   C
Sbjct: 109 DILKCICKNCSRVLLADKDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAGSKRAVKC 168

Query: 347 FRCGYVNGNVKKATGMVGIFHE 412
            RCGY+NG VKKA   + I H+
Sbjct: 169 SRCGYINGMVKKAKEPLKIQHD 190


>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
           gi|482548169|gb|EOA12363.1| hypothetical protein
           CARUB_v10025743mg [Capsella rubella]
          Length = 1376

 Score =  162 bits (410), Expect = 5e-38
 Identities = 77/138 (55%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YYD + KP E GLLD RMGPPNK   C TC G+F  CPGH+GYL L LPVYN+GY N I+
Sbjct: 49  YYDPNCKPFEGGLLDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFIL 108

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKIAQ-KKTDLQKIIKKICMSQGAKR---CF 349
           DILKCICK CS +LL E+   D+LR+MR  K+   KKT+L K + K C +  ++R   C 
Sbjct: 109 DILKCICKCCSNMLLDEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMASQRIITCK 168

Query: 350 RCGYVNGNVKKATGMVGI 403
           +CGY+NG VKK    +GI
Sbjct: 169 KCGYLNGMVKKIPAQMGI 186


>ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
           gi|462403787|gb|EMJ09344.1| hypothetical protein
           PRUPE_ppa024521mg, partial [Prunus persica]
          Length = 867

 Score =  162 bits (410), Expect = 5e-38
 Identities = 80/143 (55%), Positives = 103/143 (72%), Gaps = 6/143 (4%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKN-GRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTI 178
           YYD ++KPIE GLLD R+GP NK+ G CATC      CPGHFG+L LALPV NVGYL+T+
Sbjct: 54  YYDPNQKPIEGGLLDPRLGPANKSSGECATCGAVMKDCPGHFGFLVLALPVLNVGYLSTV 113

Query: 179 VDILKCICKSCSRILLAEEPRRDYLRRMRTQKIAQ-KKTDLQKIIKKICMSQGAK----R 343
           VDILKCICK CS ILL E  R D+L++MR+ K+   +KT+L K I K C +        +
Sbjct: 114 VDILKCICKLCSGILLEEGMRNDFLKKMRSPKMEPLRKTELMKKIVKKCNNLTTNYRPVK 173

Query: 344 CFRCGYVNGNVKKATGMVGIFHE 412
           C +CG++NG+VKKA G++GI H+
Sbjct: 174 CSKCGFINGSVKKAVGVLGIIHD 196


>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
           gi|561005141|gb|ESW04135.1| hypothetical protein
           PHAVU_011G070100g [Phaseolus vulgaris]
          Length = 1392

 Score =  160 bits (406), Expect = 1e-37
 Identities = 79/139 (56%), Positives = 100/139 (71%), Gaps = 2/139 (1%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YYD  KKPI  GLLD RMGP NK+  CATCHG+F  CPGH+GYL+LALPV+NVGYL +IV
Sbjct: 51  YYDSFKKPIHGGLLDPRMGPANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIV 110

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKIAQ-KKTDLQKI-IKKICMSQGAKRCFRC 355
           +ILKCICK C+RILL E+ R+ +L++MR+ K ++  K D  K+ I K C       C RC
Sbjct: 111 EILKCICKGCARILLDEDTRKKHLKKMRSSKKSELDKMDFVKVRIIKDCSK--VVNCPRC 168

Query: 356 GYVNGNVKKATGMVGIFHE 412
           GY+NG+VKK    + I H+
Sbjct: 169 GYINGSVKKLPASLIIMHD 187


>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
           lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
           ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
          Length = 1376

 Score =  160 bits (406), Expect = 1e-37
 Identities = 76/138 (55%), Positives = 97/138 (70%), Gaps = 4/138 (2%)
 Frame = +2

Query: 2   YYDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIV 181
           YY+ + KP E+GLLD+RMGPPNK   C TC G+F  CPGH+GYL L LPVYNVG+ N I+
Sbjct: 49  YYETNLKPYENGLLDARMGPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFIL 108

Query: 182 DILKCICKSCSRILLAEEPRRDYLRRMRTQKIAQ-KKTDLQKIIKKICMSQGAKR---CF 349
           DILKCICK CS +LL E+   D+LR+MR  K+   KKT+L K + K C +  ++R   C 
Sbjct: 109 DILKCICKRCSNMLLDEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMASQRIITCK 168

Query: 350 RCGYVNGNVKKATGMVGI 403
           +CGY+NG VKK    +GI
Sbjct: 169 KCGYLNGMVKKIAAQMGI 186


>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
          Length = 1383

 Score =  160 bits (404), Expect = 2e-37
 Identities = 77/137 (56%), Positives = 94/137 (68%), Gaps = 4/137 (2%)
 Frame = +2

Query: 5   YDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIVD 184
           YD S KP E+GLLD RMGPPNK   C TC G+F  CPGH+GYL L LPVYNVGY N I+D
Sbjct: 50  YDHSFKPYENGLLDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILD 109

Query: 185 ILKCICKSCSRILLAEEPRRDYLRRMRTQKIAQ-KKTDLQKIIKKICMSQGAKR---CFR 352
           ILKCICK CS +LL E+   D+LR+MR  ++   KKT+L K + K C +  ++R   C +
Sbjct: 110 ILKCICKRCSNMLLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKK 169

Query: 353 CGYVNGNVKKATGMVGI 403
           CGY+NG VKK     GI
Sbjct: 170 CGYLNGMVKKIAAQFGI 186


>ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana]
           gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1
           [Arabidopsis thaliana]
          Length = 1376

 Score =  160 bits (404), Expect = 2e-37
 Identities = 77/137 (56%), Positives = 94/137 (68%), Gaps = 4/137 (2%)
 Frame = +2

Query: 5   YDQSKKPIESGLLDSRMGPPNKNGRCATCHGDFTKCPGHFGYLSLALPVYNVGYLNTIVD 184
           YD S KP E+GLLD RMGPPNK   C TC G+F  CPGH+GYL L LPVYNVGY N I+D
Sbjct: 50  YDHSFKPYENGLLDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILD 109

Query: 185 ILKCICKSCSRILLAEEPRRDYLRRMRTQKIAQ-KKTDLQKIIKKICMSQGAKR---CFR 352
           ILKCICK CS +LL E+   D+LR+MR  ++   KKT+L K + K C +  ++R   C +
Sbjct: 110 ILKCICKRCSNMLLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKK 169

Query: 353 CGYVNGNVKKATGMVGI 403
           CGY+NG VKK     GI
Sbjct: 170 CGYLNGMVKKIAAQFGI 186