BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00015102
         (1682 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              736   0.0  
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   736   0.0  
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   663   0.0  
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   663   0.0  
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   649   0.0  
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   647   0.0  
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   647   0.0  
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   636   e-179
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun...   623   e-176
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   613   e-173
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid...   600   e-169
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr...   599   e-168
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme...   595   e-167
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A...   587   e-165
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...   585   e-164
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps...   583   e-164
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme...   567   e-159
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...   566   e-158
ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps...   565   e-158
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid...   558   e-156

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  736 bits (1899), Expect = 0.0
 Identities = 365/543 (67%), Positives = 440/543 (81%), Gaps = 2/543 (0%)
 Frame = -1

Query: 1679 PLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGRS 1500
            PLLIQ RLFN G AVKGTLL+NRKLP RTIQIRPSMIKVETD  LS  QTVNS+EI G S
Sbjct: 388  PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTS 447

Query: 1499 NQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDF 1320
            NQP+++YLS++LIALLSYGGVP EYF+ +L +ALED     S+KRAALRV LR+GEMDD 
Sbjct: 448  NQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDS 507

Query: 1319 TAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQV 1140
               RMILSGIP+DEPFL H LS + NEERKGL+ G+LPV++C+YLMGTADPTG L+SD+V
Sbjct: 508  IVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEV 567

Query: 1139 CIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLAD 960
            CIILD+GQ+ G+VLVYKHPGLHFGDIHVLNATYV+A+ +FVGNAKYAIFFPIKG RSLAD
Sbjct: 568  CIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLAD 627

Query: 959  EMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLFQRF 780
            EMANSD DGDMY+VSRN QLL++F+ SEPW    S ++V +  P + S + LEH LFQ F
Sbjct: 628  EMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLF 687

Query: 779  LTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPKTG 600
            LTTRFQ S  +G+A+D+WL FMDRLL L +D ++EK+ LKRKML+L DIYYDALDAPK+G
Sbjct: 688  LTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSG 747

Query: 599  VKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCFDAE- 423
            +K+ V  ELKA+ +PH+M RE+SY STSILG IYD VESFQ +N +T+++W LP F+ + 
Sbjct: 748  MKVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDA 807

Query: 422  VPEACLKLWKDHYSNYKHDMCVALQQHTGETK-ESADEVIKKYKQLLYAAAEFEESPRKM 246
            VP+ACL+ WKD Y  Y+ +M  AL QH GETK E A EVI KYKQ+LY AAEFEESPR +
Sbjct: 808  VPQACLRSWKDRYDQYRSEMAAAL-QHGGETKDEYAAEVINKYKQILYGAAEFEESPRNL 866

Query: 245  EEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPSVLRE 66
            E+I  EALAIY +TYE   +   VS C F W+VAG ALCKLYT+K  EKS+VC+PSVLR+
Sbjct: 867  EDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQ 926

Query: 65   ILS 57
            + +
Sbjct: 927  VFN 929


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  736 bits (1899), Expect = 0.0
 Identities = 365/543 (67%), Positives = 440/543 (81%), Gaps = 2/543 (0%)
 Frame = -1

Query: 1679 PLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGRS 1500
            PLLIQ RLFN G AVKGTLL+NRKLP RTIQIRPSMIKVETD  LS  QTVNS+EI G S
Sbjct: 402  PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTS 461

Query: 1499 NQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDF 1320
            NQP+++YLS++LIALLSYGGVP EYF+ +L +ALED     S+KRAALRV LR+GEMDD 
Sbjct: 462  NQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDS 521

Query: 1319 TAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQV 1140
               RMILSGIP+DEPFL H LS + NEERKGL+ G+LPV++C+YLMGTADPTG L+SD+V
Sbjct: 522  IVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEV 581

Query: 1139 CIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLAD 960
            CIILD+GQ+ G+VLVYKHPGLHFGDIHVLNATYV+A+ +FVGNAKYAIFFPIKG RSLAD
Sbjct: 582  CIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLAD 641

Query: 959  EMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLFQRF 780
            EMANSD DGDMY+VSRN QLL++F+ SEPW    S ++V +  P + S + LEH LFQ F
Sbjct: 642  EMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLF 701

Query: 779  LTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPKTG 600
            LTTRFQ S  +G+A+D+WL FMDRLL L +D ++EK+ LKRKML+L DIYYDALDAPK+G
Sbjct: 702  LTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSG 761

Query: 599  VKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCFDAE- 423
            +K+ V  ELKA+ +PH+M RE+SY STSILG IYD VESFQ +N +T+++W LP F+ + 
Sbjct: 762  MKVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDA 821

Query: 422  VPEACLKLWKDHYSNYKHDMCVALQQHTGETK-ESADEVIKKYKQLLYAAAEFEESPRKM 246
            VP+ACL+ WKD Y  Y+ +M  AL QH GETK E A EVI KYKQ+LY AAEFEESPR +
Sbjct: 822  VPQACLRSWKDRYDQYRSEMAAAL-QHGGETKDEYAAEVINKYKQILYGAAEFEESPRNL 880

Query: 245  EEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPSVLRE 66
            E+I  EALAIY +TYE   +   VS C F W+VAG ALCKLYT+K  EKS+VC+PSVLR+
Sbjct: 881  EDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQ 940

Query: 65   ILS 57
            + +
Sbjct: 941  VFN 943


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334280|gb|ERP58267.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  663 bits (1710), Expect = 0.0
 Identities = 341/545 (62%), Positives = 417/545 (76%), Gaps = 4/545 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQFRLFN G AVKGT LVN+KL H+T+ IRPSMIKVETD  LS   + NSLEIVG 
Sbjct: 334  PPLLIQFRLFNNGRAVKGTFLVNKKLTHQTLHIRPSMIKVETDPKLSSTFSKNSLEIVGT 393

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            S++PK+T+LS++LIALLSYGGVP+E+F+GI+ NALED     SNK AALRV L YG+MDD
Sbjct: 394  SSRPKKTFLSKNLIALLSYGGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDD 453

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
               A MI  GIP++EP+LQ RLSIL  EE+K LKGG++PV E YYLMGTADPTGLLESD+
Sbjct: 454  NIVATMIGCGIPLEEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDE 513

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VCIILD GQISG+VL+Y++PGLHFGDIH+L ATYV+ + DFVGNAKYAIFFP KG RSLA
Sbjct: 514  VCIILDCGQISGEVLIYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLA 573

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLFQR 783
            DEM+  D DGDM+FVSRNPQLLE FK +EPWT   S  NV N  P+E S E LE  LF+ 
Sbjct: 574  DEMSGGDFDGDMFFVSRNPQLLETFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELFKL 633

Query: 782  FLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPKT 603
            FL  RFQPS T+GVA+DSWLA MDRLL LG D AEE   +K  +  L+DIYYDALDAPK 
Sbjct: 634  FLRNRFQPSSTVGVAADSWLAMMDRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKK 693

Query: 602  -GVKIEVPSELKAKIYPHYM--DRENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCF 432
             G +IEVP  LKA+++PH+M  + + +Y+STSILG IYD V++++  +L++ DVW LPCF
Sbjct: 694  GGRRIEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCF 753

Query: 431  DAEVPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESPR 252
            D EV E  L  WK+ Y  Y+ +M  AL+    E+ + A+EVI+KYK+ LY AAEF  S R
Sbjct: 754  DDEVHELYLVKWKELYGQYRKEMRNALKAGE-ESNDKANEVIRKYKEFLYEAAEFNLSKR 812

Query: 251  KMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMK-QSEKSIVCLPSV 75
            + EEI  EA+A+YQ++Y  AKS+G V  C FAW+VAG ALC LY +K Q E+ ++C PS 
Sbjct: 813  RDEEIFEEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPSA 872

Query: 74   LREIL 60
            L+ IL
Sbjct: 873  LKGIL 877


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334279|gb|ERP58266.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  663 bits (1710), Expect = 0.0
 Identities = 341/545 (62%), Positives = 417/545 (76%), Gaps = 4/545 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQFRLFN G AVKGT LVN+KL H+T+ IRPSMIKVETD  LS   + NSLEIVG 
Sbjct: 356  PPLLIQFRLFNNGRAVKGTFLVNKKLTHQTLHIRPSMIKVETDPKLSSTFSKNSLEIVGT 415

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            S++PK+T+LS++LIALLSYGGVP+E+F+GI+ NALED     SNK AALRV L YG+MDD
Sbjct: 416  SSRPKKTFLSKNLIALLSYGGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDD 475

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
               A MI  GIP++EP+LQ RLSIL  EE+K LKGG++PV E YYLMGTADPTGLLESD+
Sbjct: 476  NIVATMIGCGIPLEEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDE 535

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VCIILD GQISG+VL+Y++PGLHFGDIH+L ATYV+ + DFVGNAKYAIFFP KG RSLA
Sbjct: 536  VCIILDCGQISGEVLIYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLA 595

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLFQR 783
            DEM+  D DGDM+FVSRNPQLLE FK +EPWT   S  NV N  P+E S E LE  LF+ 
Sbjct: 596  DEMSGGDFDGDMFFVSRNPQLLETFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELFKL 655

Query: 782  FLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPKT 603
            FL  RFQPS T+GVA+DSWLA MDRLL LG D AEE   +K  +  L+DIYYDALDAPK 
Sbjct: 656  FLRNRFQPSSTVGVAADSWLAMMDRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKK 715

Query: 602  -GVKIEVPSELKAKIYPHYM--DRENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCF 432
             G +IEVP  LKA+++PH+M  + + +Y+STSILG IYD V++++  +L++ DVW LPCF
Sbjct: 716  GGRRIEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCF 775

Query: 431  DAEVPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESPR 252
            D EV E  L  WK+ Y  Y+ +M  AL+    E+ + A+EVI+KYK+ LY AAEF  S R
Sbjct: 776  DDEVHELYLVKWKELYGQYRKEMRNALKAGE-ESNDKANEVIRKYKEFLYEAAEFNLSKR 834

Query: 251  KMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMK-QSEKSIVCLPSV 75
            + EEI  EA+A+YQ++Y  AKS+G V  C FAW+VAG ALC LY +K Q E+ ++C PS 
Sbjct: 835  RDEEIFEEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPSA 894

Query: 74   LREIL 60
            L+ IL
Sbjct: 895  LKGIL 899


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
            gi|550336519|gb|ERP59562.1| hypothetical protein
            POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  649 bits (1675), Expect = 0.0
 Identities = 338/545 (62%), Positives = 413/545 (75%), Gaps = 4/545 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQFRLFN G AVKGT LVN+KL HRT+ +RPSMIKVETD  LS+  + NSLEIVG 
Sbjct: 334  PPLLIQFRLFNNGRAVKGTFLVNKKLNHRTLHVRPSMIKVETDPKLSNTFSKNSLEIVGT 393

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            S +PK+T+LS++LIALLSYGGVP+E+F+GIL NALED     SNK+AALRV L YG+MDD
Sbjct: 394  SCRPKKTFLSKNLIALLSYGGVPEEFFMGILNNALEDAHGILSNKKAALRVALNYGDMDD 453

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
               A MI  GIP++EP+LQH LSILK EE+K LKGG++PV E YYLMGTADPTGLLESD+
Sbjct: 454  NIVATMIGCGIPLEEPYLQHHLSILKKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDE 513

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VCIILD GQ+SG+VLVY++PGLHFGDIH+L ATYV+ + DFVGNAKYAIFFP KG RSLA
Sbjct: 514  VCIILDCGQVSGEVLVYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLA 573

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLFQR 783
            DEM+  D DGDM+FVSRNP+LLE+FK +EPWT   S  NV N  P+E S E LE  LF+ 
Sbjct: 574  DEMSGGDFDGDMFFVSRNPRLLENFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELFKL 633

Query: 782  FLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPKT 603
            FL  RFQPS T+GVA+DSWLA MDRLL LG D  EE   +K+ +  L+DIYYDALDAPK 
Sbjct: 634  FLRNRFQPSFTVGVAADSWLAMMDRLLTLGNDCTEEIACVKKNINLLIDIYYDALDAPKK 693

Query: 602  -GVKIEVPSELKAKIYPHYMDR--ENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCF 432
             G KIEVP  LKA+++PH+M++  + +Y+STSILG IYD V++++  +L+          
Sbjct: 694  GGRKIEVPEALKAELFPHFMEKHEKKTYRSTSILGKIYDKVKAYEDMDLS---------- 743

Query: 431  DAEVPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESPR 252
             + V E+CL  WK  Y  Y+ +M  ALQ    E    A+EVIKKYK++LY AAEF  S R
Sbjct: 744  -SNVHESCLVKWKGLYGQYRTEMRNALQAGK-EKNNEANEVIKKYKEILYEAAEFNLSRR 801

Query: 251  KMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMK-QSEKSIVCLPSV 75
            + EEI  EA A+YQ+TY  AK +G+V KCGFAW+VAG ALC LY +K Q E+ ++C PS 
Sbjct: 802  RDEEIFEEARALYQVTYNHAKRQGAVGKCGFAWRVAGLALCTLYVLKNQEERPLICSPSA 861

Query: 74   LREIL 60
            L+ IL
Sbjct: 862  LKGIL 866


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843311|ref|XP_006475557.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
            sinensis] gi|557554498|gb|ESR64512.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  647 bits (1670), Expect = 0.0
 Identities = 333/545 (61%), Positives = 416/545 (76%), Gaps = 5/545 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLL+Q RLF  G AVKGTLL+N+KLP +TIQIRPSMIKV+ D  LS  QT NSLE+V  
Sbjct: 468  PPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQTFNSLEVVKT 527

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMD- 1326
            SNQP++TYLSR+LIALLSYGGVP+ +F+ IL NAL+D R   SNKR AL+V   YG MD 
Sbjct: 528  SNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDY 587

Query: 1325 DFTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESD 1146
            DFT+ARMILSGI +DEP+LQHRLSIL  EE+K L+ G+LPV+E YYLMGT DPTG+L+S+
Sbjct: 588  DFTSARMILSGISLDEPYLQHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSN 647

Query: 1145 QVCIILDNGQISG-KVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRS 969
            +VCIIL +GQ+S  KVLVY++PGLHFGDIHVL ATYVK + DFVG +KYAIFFP  G RS
Sbjct: 648  EVCIILKDGQVSWEKVLVYRNPGLHFGDIHVLKATYVKELEDFVGTSKYAIFFPCNGPRS 707

Query: 968  LADEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLF 789
            LADE+A  D DGDMYFVSRNP+LL+HFK SE W    SK    N  P + S E LE  LF
Sbjct: 708  LADEIAGGDFDGDMYFVSRNPELLKHFKESERWMST-SKNLSANKRPIDFSLEELESELF 766

Query: 788  QRFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAP 609
            + FL TRF PS    +A+D W A MDR L LG++SAEEK  +K  ML+L++IYYDALDAP
Sbjct: 767  KLFLNTRFCPSNAKSLAADCWQAVMDRFLTLGDESAEEKAAMKENMLRLINIYYDALDAP 826

Query: 608  K-TGVKIEVPSELKAKIYPHYMDRENS--YKSTSILGDIYDTVESFQMQNLATEDVWTLP 438
            K +G+K+EVP +LK + +P YM R+ S  ++STS+LG IY+TV+S++  + +  ++W LP
Sbjct: 827  KKSGIKVEVPEDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLP 886

Query: 437  CFDAEVPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEES 258
            CFD  VPEAC+  WK +Y  Y+ +M  A+ + T E +E+A+ VI+KYKQ+LY AAEFE+S
Sbjct: 887  CFDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQS 946

Query: 257  PRKMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPS 78
             R +EEI +EALAIY ITY+ A SR  VS C FAW+VAGSAL K Y  +Q ++S++C  S
Sbjct: 947  TRTLEEIYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSAS 1006

Query: 77   VLREI 63
            VLREI
Sbjct: 1007 VLREI 1011


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843309|ref|XP_006475556.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
            sinensis] gi|557554497|gb|ESR64511.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  647 bits (1670), Expect = 0.0
 Identities = 333/545 (61%), Positives = 416/545 (76%), Gaps = 5/545 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLL+Q RLF  G AVKGTLL+N+KLP +TIQIRPSMIKV+ D  LS  QT NSLE+V  
Sbjct: 470  PPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQTFNSLEVVKT 529

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMD- 1326
            SNQP++TYLSR+LIALLSYGGVP+ +F+ IL NAL+D R   SNKR AL+V   YG MD 
Sbjct: 530  SNQPRKTYLSRNLIALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDY 589

Query: 1325 DFTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESD 1146
            DFT+ARMILSGI +DEP+LQHRLSIL  EE+K L+ G+LPV+E YYLMGT DPTG+L+S+
Sbjct: 590  DFTSARMILSGISLDEPYLQHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSN 649

Query: 1145 QVCIILDNGQISG-KVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRS 969
            +VCIIL +GQ+S  KVLVY++PGLHFGDIHVL ATYVK + DFVG +KYAIFFP  G RS
Sbjct: 650  EVCIILKDGQVSWEKVLVYRNPGLHFGDIHVLKATYVKELEDFVGTSKYAIFFPCNGPRS 709

Query: 968  LADEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLF 789
            LADE+A  D DGDMYFVSRNP+LL+HFK SE W    SK    N  P + S E LE  LF
Sbjct: 710  LADEIAGGDFDGDMYFVSRNPELLKHFKESERWMST-SKNLSANKRPIDFSLEELESELF 768

Query: 788  QRFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAP 609
            + FL TRF PS    +A+D W A MDR L LG++SAEEK  +K  ML+L++IYYDALDAP
Sbjct: 769  KLFLNTRFCPSNAKSLAADCWQAVMDRFLTLGDESAEEKAAMKENMLRLINIYYDALDAP 828

Query: 608  K-TGVKIEVPSELKAKIYPHYMDRENS--YKSTSILGDIYDTVESFQMQNLATEDVWTLP 438
            K +G+K+EVP +LK + +P YM R+ S  ++STS+LG IY+TV+S++  + +  ++W LP
Sbjct: 829  KKSGIKVEVPEDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLP 888

Query: 437  CFDAEVPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEES 258
            CFD  VPEAC+  WK +Y  Y+ +M  A+ + T E +E+A+ VI+KYKQ+LY AAEFE+S
Sbjct: 889  CFDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQS 948

Query: 257  PRKMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPS 78
             R +EEI +EALAIY ITY+ A SR  VS C FAW+VAGSAL K Y  +Q ++S++C  S
Sbjct: 949  TRTLEEIYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSAS 1008

Query: 77   VLREI 63
            VLREI
Sbjct: 1009 VLREI 1013


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  636 bits (1640), Expect = e-179
 Identities = 331/542 (61%), Positives = 406/542 (74%), Gaps = 2/542 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQFRLF  G AVKGT L+N++LP RTIQIR SMIKVE D  L + +T NSLE+VG 
Sbjct: 515  PPLLIQFRLFYNGLAVKGTFLLNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGT 574

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            SN PK+T+LSR+LIALL+YGGVP+EYF+ IL++AL+DV+   S+KRAALRV +  GEMDD
Sbjct: 575  SNPPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDD 634

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
            F  ARMIL+GIP+DE +LQ+RLS+L  EE+K LK GRL V ECYYLMGT DPT  LES +
Sbjct: 635  FLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGE 694

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VC+IL NGQI+GKVLVY++PGLHFGDIHVL A YV+ +   VGNAKYAIFF  KG RS+A
Sbjct: 695  VCVILYNGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVA 754

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLFQR 783
            DE+A  D DGDMY+VSRN QLLE+F+  EPW    S + V N  P E SA+ LE+ LF+ 
Sbjct: 755  DEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKL 814

Query: 782  FLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPKT 603
            FL+TRFQPS    VA+D+WLA MD+ L+LGE+  EE++ ++ K+LQL++IYYDALDAPK 
Sbjct: 815  FLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKK 874

Query: 602  -GVKIEVPSELKAKIYPHYMDR-ENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCFD 429
             G KIEVP  LKA   PH+M+R +NSY STSILG I+DT   +Q + +   +V  LPCF+
Sbjct: 875  GGKKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTANMYQ-EEVPNIEVQKLPCFE 933

Query: 428  AEVPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESPRK 249
             E+PE     WK  Y  Y+ DM  A+Q        +A+  IKKYK++LY A E E SPR 
Sbjct: 934  EELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRS 993

Query: 248  MEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPSVLR 69
             EE+  EALAIYQ+TY+ A SR SV  CGFAWKVAGSAL KLY +K SE+S  CLPSV+R
Sbjct: 994  NEEVYQEALAIYQVTYDHAMSR-SVRNCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMR 1052

Query: 68   EI 63
            EI
Sbjct: 1053 EI 1054


>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
            gi|462399806|gb|EMJ05474.1| hypothetical protein
            PRUPE_ppa001584mg [Prunus persica]
          Length = 798

 Score =  623 bits (1607), Expect = e-176
 Identities = 318/544 (58%), Positives = 404/544 (74%), Gaps = 4/544 (0%)
 Frame = -1

Query: 1679 PLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGRS 1500
            PLL+QFRLF KG AVKGT L+N+ LP +TIQIRPSM+KVETD  +S  QTVNSLEIV  S
Sbjct: 255  PLLLQFRLFYKGRAVKGTFLINKTLPPKTIQIRPSMVKVETDPMISDDQTVNSLEIVTVS 314

Query: 1499 NQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD- 1323
               + T+ SRHLIALL +GGVPKEYF  +L+  LED R    ++RAA +V   +GE+DD 
Sbjct: 315  KSHRNTFFSRHLIALLCHGGVPKEYFRELLMKDLEDTRGVFCSRRAAFKVAYNHGEIDDD 374

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
            + + +MILSGIP++E +LQ+RLSILK EE K L+ G++   + Y LMGTADPTG+LE D+
Sbjct: 375  YNSVKMILSGIPLEESYLQYRLSILKKEENKSLQKGKICSPQSYMLMGTADPTGILERDE 434

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VCIILD+GQ+SG+VLVY+HPGLHFGDIH+L A YVK +   VGNAKYAIFF  KG RS+A
Sbjct: 435  VCIILDSGQMSGQVLVYRHPGLHFGDIHLLKARYVKELEYVVGNAKYAIFFSCKGPRSVA 494

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSK-KNVVNTNPNELSAEGLEHVLFQ 786
            DEM   D DGD+Y+VSRNPQLLE FK SEPW    S    V +T P+EL    +E  L +
Sbjct: 495  DEMGGGDFDGDLYWVSRNPQLLECFKPSEPWIEASSSTPKVASTRPSELLPNHIEDALIK 554

Query: 785  RFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPK 606
             FL TRF+PS  M  ASDSWLA MDRLLILG+ S  EK  +K  ML+LVD+YY+ALDAPK
Sbjct: 555  LFLKTRFEPSFAMSEASDSWLAMMDRLLILGDSSNSEKTHVKANMLRLVDLYYEALDAPK 614

Query: 605  TGVKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCFDA 426
             G K+ VP ELK+ ++PHYM+R NSYKSTSILG IYDTV ++Q ++ + ++V  LP FD 
Sbjct: 615  KGGKVVVPGELKSNLFPHYMERVNSYKSTSILGLIYDTVNAYQAEDASIKEVKKLPMFDV 674

Query: 425  EVPEACLKLWKDHYSNYKHDMCVALQQHTGETK-ESADEVIKKYKQLLYAAAE-FEESPR 252
            EVPE CLK W++HY +Y+ +M  A+Q    ++K  +AD+V++KYK++LY  AE  E S R
Sbjct: 675  EVPEECLKKWREHYQHYRSEMSSAMQDDDRDSKNNAADKVLRKYKEILYGGAEDLENSTR 734

Query: 251  KMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPSVL 72
             + EI  EALAIY++TY+ A S+G+V KC FAWKVAGSALCK Y  KQ  ++I    SVL
Sbjct: 735  PLHEIFDEALAIYRVTYDHAISQGAVGKCCFAWKVAGSALCKYYMNKQGARTIEASFSVL 794

Query: 71   REIL 60
            ++++
Sbjct: 795  KDLV 798


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  613 bits (1581), Expect = e-173
 Identities = 314/545 (57%), Positives = 404/545 (74%), Gaps = 5/545 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQFR+F  GYAVKGT L+N+KL  RT+Q+RPSMIKV  D  LS+  T N+LE+V  
Sbjct: 440  PPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTT 499

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            SN P++T LS++L+ALLSYGG+P E+F+ ILLN LE+ +    NK AAL V L YGEMDD
Sbjct: 500  SNPPRRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNYGEMDD 559

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
              AA+MIL GIP+DEP L++ LSIL   E+  LK GRLPV+E YYLMGT DPTG L+ D+
Sbjct: 560  QNAAQMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTGELKEDE 619

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VC+IL++GQISG+VLVY++PGLHFGDIH+L ATYVKA+ ++VGN+KYA+FFP KG RSL 
Sbjct: 620  VCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKYAVFFPQKGPRSLG 679

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTH--PCSKKNVVNTNPNELSAEGLEHVLF 789
            DE+A  D DGDMYF+SRNP+LLEHFK SEPW    P SK N     P++LS E LE  LF
Sbjct: 680  DEIAGGDFDGDMYFISRNPELLEHFKPSEPWVSLTPPSKSN-SGRAPSQLSPEELEEELF 738

Query: 788  QRFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAP 609
            + FL   F  S  +G+A+DSWL  MDRLLILG++ AEEK  +K+KML+L+DIYYDALDAP
Sbjct: 739  EMFLKAGFHASNVIGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLKLIDIYYDALDAP 798

Query: 608  KTGVKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVESFQMQN-LATEDVWTLPCF 432
            K G K+ +P+EL+  I+PHYM+RE  +KSTSILG IYD V+S   +    + ++  LPCF
Sbjct: 799  KKGDKVYLPNELRPDIFPHYMEREKKFKSTSILGLIYDFVKSQTTEEPTPSSEISKLPCF 858

Query: 431  DAE-VPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESP 255
            + E V E  ++  +  Y NY+ +M  A++    +  ESA+EVI++YKQ  Y AA FE+S 
Sbjct: 859  EDEPVSEFHMEKCRRWYDNYRSEMTQAMKT---DKDESANEVIQRYKQEFYGAAGFEDSK 915

Query: 254  RKMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQ-SEKSIVCLPS 78
            + +EE+  +AL +Y+I Y+ A   G VSKCGF WKVAG  LC+ Y MK+  EKS+VC PS
Sbjct: 916  KSLEELYPQALTLYKIVYDYAIHAG-VSKCGFVWKVAGPVLCRFYLMKKMQEKSLVCAPS 974

Query: 77   VLREI 63
            VL+E+
Sbjct: 975  VLKEL 979


>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
            gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 5;
            Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
            5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
            polymerase 5 [Arabidopsis thaliana]
          Length = 977

 Score =  600 bits (1548), Expect = e-169
 Identities = 308/545 (56%), Positives = 402/545 (73%), Gaps = 5/545 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQFR+F  GYAVKGT L+N+KL  RT+Q+RPSMIKV  D  LS+  T N+LE+V  
Sbjct: 436  PPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTT 495

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            SN PK+T LS++L+ALLSYGG+P E+F+ ILLN LE+ +    NKRAAL   L YGEMDD
Sbjct: 496  SNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDD 555

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
              AA+MIL GIP+DEP L++ LSIL   E+  LK G+LPV+E YYLMGT DPTG L+ D+
Sbjct: 556  QNAAQMILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPTGALKEDE 615

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VC+IL++GQISG+VLVY++PGLHFGDIH+L ATYVKA+ ++VGN+K+A+FFP KG RSL 
Sbjct: 616  VCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLG 675

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTH--PCSKKNVVNTNPNELSAEGLEHVLF 789
            DE+A  D DGDMYF+SRNP+LLE+FK SEPW    P SK N     P++LS E LE  LF
Sbjct: 676  DEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSN-SGRAPSQLSPEELEEELF 734

Query: 788  QRFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAP 609
            + FLT  F  S  +G+A+DSWL  MDR LILG+D AEEK  +K+KML+L+DIYYDALDAP
Sbjct: 735  EMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAP 794

Query: 608  KTGVKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVESFQMQNLA-TEDVWTLPCF 432
            K G K+ +P++LK  I+PHYM+R+  ++STSILG I+D V+S   +  + + ++  LPCF
Sbjct: 795  KKGDKVYLPNKLKPDIFPHYMERDKKFQSTSILGLIFDFVKSQTTEEPSPSSEISKLPCF 854

Query: 431  DAE-VPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESP 255
            + E V E  ++  +  Y NY+ +M  A++    +  ESA+EVI++YKQ  Y AA FE+S 
Sbjct: 855  EDEPVSEFHMQKCRLWYDNYRTEMTQAMKT---DKDESANEVIQRYKQEFYGAAGFEDSK 911

Query: 254  RKMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLY-TMKQSEKSIVCLPS 78
            + +EE+  +ALA+Y+I Y+ A   G VSKC F WKVAG  LC+ Y   K  EK +VC PS
Sbjct: 912  KSLEELYPQALALYKIVYDYAIHAG-VSKCRFVWKVAGPVLCRFYLNKKMQEKCLVCAPS 970

Query: 77   VLREI 63
            VL+E+
Sbjct: 971  VLKEL 975


>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
            gi|557110064|gb|ESQ50361.1| hypothetical protein
            EUTSA_v10001897mg [Eutrema salsugineum]
          Length = 988

 Score =  599 bits (1544), Expect = e-168
 Identities = 307/544 (56%), Positives = 390/544 (71%), Gaps = 4/544 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQFR+F  G AVKGT L+N+KLP RT+Q+RPSMIKV  D  LS+  T NSLE+V  
Sbjct: 448  PPLLIQFRMFYDGNAVKGTFLLNKKLPDRTVQVRPSMIKVSKDRALSNFSTFNSLEVVTT 507

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            SN PK+T LSR+L+ALLSYGGVP E+F+ +LLN +E+ +   +NKRAAL+  L +G+MDD
Sbjct: 508  SNPPKRTKLSRNLVALLSYGGVPNEFFLDLLLNTMEETKTIFNNKRAALKAALNHGDMDD 567

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
              AA+MIL GIP+DEP L+ RLSIL N E+  LK GRLPV+E YYLMGT DPTG L+ D+
Sbjct: 568  QNAAQMILVGIPLDEPHLKDRLSILSNIEKNDLKAGRLPVTESYYLMGTVDPTGELKEDE 627

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VC+IL++GQISG VLVY++PG+HFGDIHVL ATYVKA+ ++VGN+KYA+FFP KG RSL 
Sbjct: 628  VCVILESGQISGDVLVYRNPGVHFGDIHVLKATYVKALEEYVGNSKYAVFFPQKGPRSLG 687

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWT--HPCSKKNVVNTNPNELSAEGLEHVLF 789
            DE+A  D DGDMYF+SRNP+LLE FK SEPW    P SK N     P + S E LE  LF
Sbjct: 688  DEIAGGDFDGDMYFISRNPELLEQFKPSEPWVSLSPPSKSNSTR-KPIDFSPEELEEELF 746

Query: 788  QRFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAP 609
              FL  RF  S  +G+A+DSWL  MDR L LG++ AEEK  +KRKML L+DIYYDALDA 
Sbjct: 747  DMFLKARFHSSNVIGMAADSWLTIMDRFLTLGDERAEEKAEMKRKMLSLIDIYYDALDAA 806

Query: 608  KTGVKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVES-FQMQNLATEDVWTLPCF 432
            K GVK+ +P  LK  I+PHYM+R+  +KSTSILG IYD V+S    ++  + ++  L CF
Sbjct: 807  KKGVKVSLPDALKPDIFPHYMERDKKFKSTSILGIIYDFVQSQTAEEHTPSSEISKLQCF 866

Query: 431  DAE-VPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESP 255
            + E V E   +  +  Y NY+ +M  AL        ++A EVI+KYKQ  Y AA FE+S 
Sbjct: 867  EDEPVSEFHKEKCRPWYDNYRAEMIQAL----SNKDDTASEVIEKYKQEFYGAAGFEDSK 922

Query: 254  RKMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPSV 75
            + +EE+  +ALA+Y I Y+ A    SV KCGFAWKVAG  LC+ Y  K   K+++C  S+
Sbjct: 923  KSLEELYPQALALYNIVYDYAIEMKSVRKCGFAWKVAGPVLCRFYLKKTGGKALLCSLSM 982

Query: 74   LREI 63
            L+E+
Sbjct: 983  LKEL 986


>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 988

 Score =  595 bits (1534), Expect = e-167
 Identities = 296/543 (54%), Positives = 400/543 (73%), Gaps = 3/543 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQ RLF+ G+A+KGTLLVNRKLP RTIQ+RPSMIKVE D  + H+Q++NSLE+V  
Sbjct: 445  PPLLIQCRLFHMGHAIKGTLLVNRKLPPRTIQVRPSMIKVEKDPSV-HMQSINSLEVVTT 503

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            SN+PK+ YLS+HLIALLS+GGVP E+F+ +L + +ED    +SNKR+ALR  +  GE D+
Sbjct: 504  SNKPKRGYLSKHLIALLSFGGVPNEFFMDLLRSNMEDANHVYSNKRSALRASINCGEKDE 563

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
            + AA MIL GIP+DEPFL+H LS    EE+K L+GG+L + +C+YLMGT DPTG L+ +Q
Sbjct: 564  YNAAEMILCGIPLDEPFLKHHLSRFAREEKKKLRGGKLYMPDCFYLMGTVDPTGHLKKNQ 623

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VCII +N QI G VLVY++PGLHFGDIH ++ATYVK +  +VG++KY IFFP  G RS+A
Sbjct: 624  VCIIHENSQIVGDVLVYRNPGLHFGDIHKMDATYVKELESYVGHSKYGIFFPRVGTRSVA 683

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLFQR 783
            DE+A  D DGD Y+VS +PQLL++F+  +PW       +     P+E S E LE  LF+ 
Sbjct: 684  DEIAGGDFDGDTYWVSNHPQLLQYFRKGDPWIENSVPLDSSVKKPSEFSPEELEEELFRL 743

Query: 782  FLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAE-EKDRLKRKMLQLVDIYYDALDAPK 606
            FL TRFQPS  MG++ +SW+A MDRLL L   + E EK+R+K  ML+L+DIYY+ALDAPK
Sbjct: 744  FLKTRFQPSYAMGMSENSWMALMDRLLTLNNCTNENEKERVKENMLKLIDIYYEALDAPK 803

Query: 605  TGVKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCFDA 426
            +G K++VP++L A+++PHYM+++ S+ STSILG IYD VE + ++N    ++W LPCFD 
Sbjct: 804  SGRKVQVPNDLIAELFPHYMEKDKSFTSTSILGLIYDEVEIW-LENDMVGEIWKLPCFDV 862

Query: 425  EVPEACLKLWKDHYSNYKHDMCVALQ-QHTGETKESADEVIKKYKQLLYA-AAEFEESPR 252
            EVP +CL+ WK  Y  Y+ DM  AL  +   ++ E A EV +KYK+  Y    E E   +
Sbjct: 863  EVPPSCLEKWKTKYEEYRKDMTDALNLKDKSKSHEEAAEVNRKYKEEFYGPTLEMEGCLK 922

Query: 251  KMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPSVL 72
             + +I +EALA+Y ++YE A  +  V +CGFAWK+AGSAL +LY +KQ+EK++ C PSV+
Sbjct: 923  SIGDIFNEALAVYNVSYEYAMLKKEVKRCGFAWKIAGSALTRLYIIKQNEKALNCDPSVV 982

Query: 71   REI 63
            REI
Sbjct: 983  REI 985


>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
            gi|548857326|gb|ERN15132.1| hypothetical protein
            AMTR_s00056p00110240 [Amborella trichopoda]
          Length = 988

 Score =  587 bits (1513), Expect = e-165
 Identities = 299/540 (55%), Positives = 387/540 (71%), Gaps = 1/540 (0%)
 Frame = -1

Query: 1676 LLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGRSN 1497
            LLIQFRLF  G AVKGT+LVN+ LP  TIQ+RPSM+KVE D   S L + NS E+VG SN
Sbjct: 450  LLIQFRLFYDGCAVKGTVLVNKLLPPNTIQVRPSMVKVERDTDFSRLPSFNSFEMVGTSN 509

Query: 1496 QPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEM-DDF 1320
            +P+   LSR+LI LLS+GGVPK  F+ ++  AL+DV++   +K+ AL   ++Y E+ D+ 
Sbjct: 510  RPRGAALSRYLITLLSHGGVPKSCFMFLIQAALDDVQNVRYSKKLALTAAVKYQEISDNL 569

Query: 1319 TAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQV 1140
              ARMI  G+P++EP+LQHRLSIL  EERKGLK G++ +   YYLMGTADPTG L+ ++V
Sbjct: 570  LVARMIFCGLPLEEPYLQHRLSILMKEERKGLKEGKVLLPNSYYLMGTADPTGKLKGNEV 629

Query: 1139 CIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLAD 960
            CIILD+GQISGKVLVY+HPGLHFGDIHV  ATY++ + + VGNAK+AIFF  +G RS AD
Sbjct: 630  CIILDHGQISGKVLVYRHPGLHFGDIHVFTATYIEDLVEIVGNAKFAIFFSTQGPRSAAD 689

Query: 959  EMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLFQRF 780
            E+AN D DGDMY++S NP+LL +FK   PW    S+K      P E S + LE  LF  F
Sbjct: 690  EIANGDFDGDMYWISTNPELLHYFKAGPPWERSSSEKPPPQRKPIEYSPDELETELFDLF 749

Query: 779  LTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPKTG 600
            L +RF PS     A+DSWL +MDRLL LG++ AEEK  L +KML+L D+YY+A+DAPK+G
Sbjct: 750  LESRFHPSIAKCAAADSWLVYMDRLLTLGDECAEEKGCLHQKMLKLADLYYEAVDAPKSG 809

Query: 599  VKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCFDAEV 420
             K+EVP +LK + YPH+M+R   Y STSILG IYD V S QM ++  ED+  LPCF  EV
Sbjct: 810  KKVEVPKDLKPERYPHFMERTYQYTSTSILGQIYDLVASAQM-DVPCEDIELLPCFLEEV 868

Query: 419  PEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESPRKMEE 240
              + ++ WK  Y+ Y+ +M  AL   T + K +ADEVI+ YK++LY A E+EE  R  EE
Sbjct: 869  EPSGMEKWKGLYAQYRDEMNKALSS-TDQKKSNADEVIQNYKKILYGAQEYEERTRPREE 927

Query: 239  ILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPSVLREIL 60
            I  EA  IY I+Y  AK +  ++KCGFAWKVAG ALC+L+ +KQ + SI CL SVL+E+L
Sbjct: 928  IFREACEIYAISYFYAKEKSDIAKCGFAWKVAGCALCELHALKQKKNSITCLSSVLQELL 987


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            lycopersicum]
          Length = 1011

 Score =  585 bits (1509), Expect = e-164
 Identities = 297/537 (55%), Positives = 389/537 (72%), Gaps = 3/537 (0%)
 Frame = -1

Query: 1661 RLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGRSNQPKQT 1482
            RLF  G AVKGT LVNRK+  R I IRPSM+KVE D  +S + T +SLEIV  S++P + 
Sbjct: 476  RLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPTISSIPTFDSLEIVAISHRPNKA 535

Query: 1481 YLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD-FTAARM 1305
            YLS++LI+LLSYGGV KEYF+ +L +ALE+ +  +  KRAAL+V + Y EMDD    ARM
Sbjct: 536  YLSKNLISLLSYGGVHKEYFMELLGSALEETKQVYLRKRAALKVAINYREMDDECLTARM 595

Query: 1304 ILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILD 1125
            I SGIP++EP L  RLS L   ER  L+GG+LP+S+ +YLMGTADPTG+LES++VC+ILD
Sbjct: 596  ISSGIPLNEPHLHARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVILD 655

Query: 1124 NGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANS 945
            NGQ+SG+VLVY++PGLHFGD+HV+ A YV+ ++D VG+AKY IFF  KG RS A E+AN 
Sbjct: 656  NGQVSGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKGPRSAATEIANG 715

Query: 944  DLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLFQRFLTTRF 765
            D DGDMY+VS N +L++ + TS PW    S  N V+  P+E SA+ LE+ LF++FL  + 
Sbjct: 716  DFDGDMYWVSINRKLVDSYTTSRPWIRMHSTPNAVSKKPSEFSADELEYELFRQFLEAK- 774

Query: 764  QPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPKTGVKIEV 585
                 M +A+DSWLAFMDRLL L +D+ ++   LK KML L+DIYYDALDAPK+G K+ +
Sbjct: 775  SKGANMSLAADSWLAFMDRLLTLRDDNVDDMHSLKGKMLHLIDIYYDALDAPKSGKKVSI 834

Query: 584  PSELKAKIYPHYMDREN--SYKSTSILGDIYDTVESFQMQNLATEDVWTLPCFDAEVPEA 411
            P  LKA  +PHYM++ N  SY STSILG IYD V+S+  ++L   ++  LPCF+ E+P+ 
Sbjct: 835  PHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDEDLCITEISKLPCFEVEIPQR 894

Query: 410  CLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESPRKMEEILH 231
            C+ LW+  Y  YK DM  A+         S +EVIKKYK LLY A EFE++ RK E+I  
Sbjct: 895  CMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGAVEFEQTVRKTEDIFD 954

Query: 230  EALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPSVLREIL 60
            EALAIY +TY+ A+   S+ KCGFAWKVAGSALC+++ M + EK +  LPSVL+EIL
Sbjct: 955  EALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPILPSVLQEIL 1011


>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
            gi|482565615|gb|EOA29804.1| hypothetical protein
            CARUB_v10012898mg [Capsella rubella]
          Length = 982

 Score =  583 bits (1503), Expect = e-164
 Identities = 301/544 (55%), Positives = 390/544 (71%), Gaps = 4/544 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQFR+F  GYA+KGT L+N+K+P RT+Q+RPSMIKV  D  L ++ T N+LE+V  
Sbjct: 444  PPLLIQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKVLPD-SLPNISTFNTLEVVNT 502

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            S  PK+T LSR+L+ALLSYGG+P E+F+ IL N LE+ +    NKRAAL   L YGEMDD
Sbjct: 503  SFPPKRTKLSRNLVALLSYGGIPDEFFLDILHNTLEESKAIFYNKRAALNAALSYGEMDD 562

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
              AA+MIL+GIP+DEP L+  LS     E+  LK GRLPV+E YYLMGT DPTG L+ D+
Sbjct: 563  QNAAQMILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKEDE 622

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VC+IL++GQISG+VLVY++PGLHFGDIHVL ATYVKA+ ++VGN+K+A+FFP KG RSL 
Sbjct: 623  VCVILESGQISGEVLVYRNPGLHFGDIHVLKATYVKALEEYVGNSKFAVFFPQKGPRSLG 682

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTH--PCSKKNVVNTNPNELSAEGLEHVLF 789
            DE+A  D DGD+YF+SRNP+LLEHFK SEPW    P SK N     P + S E LE  LF
Sbjct: 683  DEIAGGDFDGDIYFISRNPELLEHFKPSEPWVSLTPPSKSNSAR-GPCQFSPEELEEELF 741

Query: 788  QRFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAP 609
            + FL   F  S  +G+A+DSWL  MDR LILG++SA+EK  +K+KML+L+DIYYDALDAP
Sbjct: 742  EMFLKAGFHASNVIGMAADSWLTIMDRFLILGDESADEKAEMKQKMLELIDIYYDALDAP 801

Query: 608  KTGVKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVES-FQMQNLATEDVWTLPCF 432
            K G K+ +P+EL+  I+PHYM+R+  +KSTSILG IYD V+S    Q     ++  LPCF
Sbjct: 802  KKGAKVYLPNELRPDIFPHYMERDKKFKSTSILGLIYDFVQSQTTKQPSPPSEINKLPCF 861

Query: 431  DAE-VPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESP 255
            + E V E  +K  +  Y  YK +M  A+         + +E+I++ K+  Y AA FEES 
Sbjct: 862  EDEPVSEFHMKECRRWYDEYKDEMTHAMNTDA----SNKNEIIERCKEDFYGAASFEESK 917

Query: 254  RKMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPSV 75
            + +EE+  +ALA+Y I Y+ A   G VS+CGF WKVAG  LC+ Y  K+ EK++V  PSV
Sbjct: 918  KSLEELYPQALALYNIVYDHATHAG-VSRCGFVWKVAGPVLCRFYLKKRHEKTLVSSPSV 976

Query: 74   LREI 63
            L+EI
Sbjct: 977  LKEI 980


>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
            vesca subsp. vesca]
          Length = 1405

 Score =  567 bits (1461), Expect = e-159
 Identities = 299/545 (54%), Positives = 386/545 (70%), Gaps = 4/545 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQ RLF+ G A KGTLLVN+KL    IQIRPSM+KV+TD  +S+ QT+NSLEIVG 
Sbjct: 865  PPLLIQCRLFHNGSASKGTLLVNKKLQPNRIQIRPSMLKVKTDPVISNNQTLNSLEIVGT 924

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            S  P+ T+LSR LIALL +GGVP+E+F+ IL  ALED       KRAAL+V  +YGEMDD
Sbjct: 925  STPPRNTHLSRILIALLVHGGVPEEFFMQILNKALEDSHGVFCKKRAALKVAEKYGEMDD 984

Query: 1322 FTAARMILS-GIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESD 1146
                R+++S GIP++E +L++RLS+L  EE   L+ GRL + + Y LMGTADPTG L+ D
Sbjct: 985  NFLGRLMISFGIPLEESYLRYRLSVLMKEENNSLRKGRLYIPDSYNLMGTADPTGTLKED 1044

Query: 1145 QVCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSL 966
            +VC    +GQ+SGKVLVY++PGLH GDIHVL ATYVK +   VGNAKY IFF  KG RS+
Sbjct: 1045 EVC----DGQLSGKVLVYRYPGLHIGDIHVLKATYVKEIEYIVGNAKYGIFFSCKGPRSI 1100

Query: 965  ADEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPC-SKKNVVNTNPNELSAEGLEHVLF 789
            ADEM   D DGD+Y+VSRNPQLLE +K SEPW     S K   +  P++ S E LE VLF
Sbjct: 1101 ADEMGGGDFDGDLYWVSRNPQLLEWYKPSEPWIEASISTKKNPSRCPSDHSPEDLEDVLF 1160

Query: 788  QRFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAP 609
            + FLTTRF+PS  M  A+D+WLA+MD  L LG+ +  EK+ +K K+LQLVD+YY ALDA 
Sbjct: 1161 RSFLTTRFEPSFAMSEAADNWLAWMDHFLTLGDSNIHEKNNVKEKILQLVDLYYTALDAA 1220

Query: 608  KTGVKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCFD 429
            K GVK++VP ELK   +PHYM +  SY STSILG IY+ V+  Q ++ + ++V  LP FD
Sbjct: 1221 KKGVKVDVPKELKVSCFPHYMGKNRSYPSTSILGSIYNRVDEHQTEDRSLKEVEKLPAFD 1280

Query: 428  A-EVPEACLKLWKDHYSNYKHDMCVALQQHTGETK-ESADEVIKKYKQLLYAAAEFEESP 255
              EVP+ACL  W + +  Y+ +M  AL     ++K +SAD VI+KY+++LY A +FEES 
Sbjct: 1281 ENEVPDACLDKWAELHRQYRKEMASALDDDDKQSKNQSADVVIRKYRKILYEANDFEESR 1340

Query: 254  RKMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPSV 75
            R +EEI +EA AIY + Y+ AK  G+V  C FAW+VAG ALC+L+    +E+    + SV
Sbjct: 1341 RPIEEIYNEAHAIYHVCYDHAKRVGNVKVCSFAWRVAGKALCQLHARNNNERFCTIVSSV 1400

Query: 74   LREIL 60
            L EIL
Sbjct: 1401 LMEIL 1405


>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            tuberosum]
          Length = 1110

 Score =  566 bits (1458), Expect = e-158
 Identities = 291/550 (52%), Positives = 385/550 (70%), Gaps = 8/550 (1%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLL+Q RLF  G AVKGTLLVNRKLP RTIQIRPSMIKVE D  LS  Q  NSLEI   
Sbjct: 554  PPLLMQCRLFYNGLAVKGTLLVNRKLPRRTIQIRPSMIKVEADPRLSRAQMFNSLEINTP 613

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            S +P+ TYLSR LIALL+YGGVP EYF  IL N LE+ +  +S++  AL+V + + + DD
Sbjct: 614  SLKPRNTYLSRTLIALLTYGGVPVEYFYDILNNTLEETQRLYSDEVTALKVAVNHRDRDD 673

Query: 1322 F-TAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESD 1146
              TA  MI++G+P+ EP+L   LS L  EER GLKGGRLP+++ +YLMGTADPT  L   
Sbjct: 674  ASTATSMIMAGVPLTEPYLWCCLSSLAKEERNGLKGGRLPIADTFYLMGTADPTDTLNPH 733

Query: 1145 QVCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSL 966
            +VC+IL++GQI G+VLVY++PGLHFGDIH L A  VK + D VGNAKY IFF  KG RS 
Sbjct: 734  EVCVILEHGQIFGEVLVYRNPGLHFGDIHRLLAVPVKNLGDIVGNAKYGIFFSTKGPRSA 793

Query: 965  ADEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVNTNPNELSAEGLEHVLFQ 786
            A E+AN D DGD Y+VS+NPQLL++F  S PW+   S    ++  PN  SAE  EH LFQ
Sbjct: 794  ATEIANGDFDGDKYWVSQNPQLLKYFTASRPWSRIHSTPKTLHREPNNFSAEEREHDLFQ 853

Query: 785  RFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRL---KRKMLQLVDIYYDALD 615
             FL TR  P+ +M  AS +W A MDRLLILG+++  E + +   K K+ +L+D+YYDA+D
Sbjct: 854  TFLETR-MPNYSMADASANWYALMDRLLILGKNNTTENEEIKSVKEKLFELIDLYYDAID 912

Query: 614  APKTGVKIEVPSELKAKIYPHYMDRENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPC 435
            APK+G K+ +P  LK   +PH++ ++ SY STS+LG+IYD VE F+ +  A  ++  L  
Sbjct: 913  APKSGNKVYIPKRLKVDKFPHFLQKKESYHSTSVLGEIYDRVEKFKAEEPAAVEIKKLSA 972

Query: 434  FDAEVPEACLKLWKDHYSNYKHDMCVALQQHTGETKESADEVIKKYKQLLYAAAEFEESP 255
            F+  +P+ CL+LW++ Y NY+ +M  AL   +    + AD+VIKKYKQLLY A + EES 
Sbjct: 973  FEVGIPDTCLRLWEERYRNYRFEMKEALNTSSESKNDLADQVIKKYKQLLYEAPDMEESI 1032

Query: 254  RKMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCK----LYTMKQSEKSIVC 87
            R   ++ ++ALAIY +TY+ AK+ G V KCGFAWKVAG+ALCK    L+  + ++K +  
Sbjct: 1033 RSTTDMYNDALAIYCVTYDYAKAIGDVRKCGFAWKVAGAALCKLHAELHAKEHNQKVMAM 1092

Query: 86   LPSVLREILS 57
             PS+L ++L+
Sbjct: 1093 SPSILHKLLN 1102


>ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella]
            gi|482565607|gb|EOA29796.1| hypothetical protein
            CARUB_v10012890mg [Capsella rubella]
          Length = 998

 Score =  565 bits (1455), Expect = e-158
 Identities = 289/545 (53%), Positives = 382/545 (70%), Gaps = 5/545 (0%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQFR+F KGYAVKGT L N+KLP +T+Q+RPSMIKV  D  L +  T NSLE+V  
Sbjct: 453  PPLLIQFRMFYKGYAVKGTFLSNKKLPPQTVQVRPSMIKVYEDQALLNFSTFNSLEVVNT 512

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            SN PK T LSR+LIALLSYGGVP ++F+ IL   LE+ +    ++RAA++  + YG+MDD
Sbjct: 513  SNPPKMTRLSRNLIALLSYGGVPNDFFLNILRKTLEESKTIFYSERAAIKAAINYGDMDD 572

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
               A MIL  IP+DEP L+ RLSIL   E+  LK GRLP+ E YYLMGT DPTG L+ ++
Sbjct: 573  QNTAEMILVDIPLDEPHLKDRLSILLKTEKNALKEGRLPIGESYYLMGTVDPTGELKENE 632

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            VC+IL+ GQISG VLVY++PGLHFGDIHVL ATYVKA+ D+VGN+KYA+FFP KG RSL 
Sbjct: 633  VCVILETGQISGNVLVYRNPGLHFGDIHVLKATYVKALEDYVGNSKYAVFFPQKGPRSLG 692

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNVVN-TNPNELSAEGLEHVLFQ 786
            DE+A  D DGDMYF+SRNPQLLEHFK SEPW        V +   P+ELS E LE  LF+
Sbjct: 693  DEIAGGDFDGDMYFISRNPQLLEHFKPSEPWVSSSKPSKVYSGRKPSELSHEELEEELFK 752

Query: 785  RFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPK 606
             FL  RF     +G+A+DSWLA MDR L LG++SA++K +  + +L+L+DIYYDALDAPK
Sbjct: 753  LFLDARFCKRDVIGMAADSWLAIMDRFLSLGDESAKKKHKSNKNLLKLIDIYYDALDAPK 812

Query: 605  TGVKIEVPSELKAKIYPHYMD-RENSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCFD 429
             G K+++P  L+   +PHYM+ ++  + STSILG I+DTVES   +      +  L C +
Sbjct: 813  KGAKVDLPPGLQVGTFPHYMEHKKKKFTSTSILGLIFDTVESQNAEIPPPSKISKLACLE 872

Query: 428  AE-VPEACLKLWKDHYSNYKHDMCVALQQHTGETKES--ADEVIKKYKQLLYAAAEFEES 258
             E VP++ ++  +  Y +YK DM  A+++ T E K++   +EVI++YKQ  Y AA FE+S
Sbjct: 873  DEPVPKSYMEKCRPWYEDYKADMSQAMKE-TDENKKNQLTNEVIQRYKQDFYGAAGFEDS 931

Query: 257  PRKMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLPS 78
               +EE+  ++LA++ I Y+ A  +  V  CGF W+VAG  LCK Y  K  ++S+V   S
Sbjct: 932  KISLEELYPKSLALHNIAYDYAIEKNDVRCCGFVWRVAGPVLCKFYAKKTQDRSLVASAS 991

Query: 77   VLREI 63
            VL+ +
Sbjct: 992  VLKRL 996


>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
            gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 3;
            Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
            3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
            polymerase 3 [Arabidopsis thaliana]
          Length = 992

 Score =  558 bits (1439), Expect = e-156
 Identities = 287/547 (52%), Positives = 382/547 (69%), Gaps = 6/547 (1%)
 Frame = -1

Query: 1682 PPLLIQFRLFNKGYAVKGTLLVNRKLPHRTIQIRPSMIKVETDLHLSHLQTVNSLEIVGR 1503
            PPLLIQFR+F  GYAVKGT L N+KLP RT+Q+RPSMIKV  D  LS+L T NSLE+V  
Sbjct: 449  PPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTT 508

Query: 1502 SNQPKQTYLSRHLIALLSYGGVPKEYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDD 1323
            SN P++  LSR+L+ALLSYGGVP ++F+ IL N LE+ +    ++RAA +  + YG  DD
Sbjct: 509  SNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG--DD 566

Query: 1322 FTAARMILSGIPVDEPFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQ 1143
               A MIL GIP+DEP+L+ RLS L   ER  LK GR P+ E YY+MGT DPTG L+ ++
Sbjct: 567  QYTADMILVGIPLDEPYLKDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENE 626

Query: 1142 VCIILDNGQISGKVLVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLA 963
            +C+IL +GQISG VLVY++PGLHFGDIHVL ATYVKA+ D+VGNAK+A+FFP KG RSL 
Sbjct: 627  ICVILHSGQISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLG 686

Query: 962  DEMANSDLDGDMYFVSRNPQLLEHFKTSEPWTHPCSKKNV-VNTNPNELSAEGLEHVLFQ 786
            DE+A  D DGDMYF+SRNP+LLEHFK SEPW        +     P+ELS E LE  LF+
Sbjct: 687  DEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKPSELSEEELEEELFK 746

Query: 785  RFLTTRFQPSRTMGVASDSWLAFMDRLLILGEDSAEEKDRLKRKMLQLVDIYYDALDAPK 606
             FL  RF     +G+A+D WL  MD  L LG++SA+EK   K+ +L+L+DIYYDALDAPK
Sbjct: 747  MFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYERKKNILKLIDIYYDALDAPK 806

Query: 605  TGVKIEVPSELKAKIYPHYMDRE--NSYKSTSILGDIYDTVESFQMQNLATEDVWTLPCF 432
             G K+++P +L+ K +PHYM+R+    ++STSILG I+DTV+S   +     ++  L  F
Sbjct: 807  KGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDTVDSHNAEEPPPSEISKLWYF 866

Query: 431  DAE-VPEACLKLWKDHYSNYKHDMCVALQQHTGETKES--ADEVIKKYKQLLYAAAEFEE 261
            + E VP++ +  +   Y NY+ +M  A+ + T + K +   +EVI++YKQ  Y AA FE+
Sbjct: 867  EDEPVPKSHMDKFTSWYENYRSEMSQAMME-TDKVKRNQLTNEVIQRYKQDFYGAAGFED 925

Query: 260  SPRKMEEILHEALAIYQITYECAKSRGSVSKCGFAWKVAGSALCKLYTMKQSEKSIVCLP 81
            S + +EE+  +ALA+Y + Y+ A   G V+KC FAW VAG  LCK Y  K  +KS+V   
Sbjct: 926  SNKSLEELYPQALALYNVVYDYAIQEG-VAKCTFAWNVAGPVLCKFYLKKTKDKSVVAST 984

Query: 80   SVLREIL 60
            SVL+++L
Sbjct: 985  SVLKKLL 991