BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00014924
         (1041 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   468   e-129
ref|XP_007041228.1| Pseudouridine synthase family protein isofor...   460   e-127
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   458   e-126
ref|XP_007041230.1| Pseudouridine synthase family protein isofor...   455   e-125
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   451   e-124
ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   451   e-124
gb|EYU26478.1| hypothetical protein MIMGU_mgv1a018737mg [Mimulus...   449   e-124
ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutr...   446   e-122
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   440   e-121
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   434   e-119
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   434   e-119
ref|XP_007148561.1| hypothetical protein PHAVU_006G218900g [Phas...   433   e-119
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu...   431   e-118
ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like ...   430   e-118
ref|XP_007148560.1| hypothetical protein PHAVU_006G218900g [Phas...   430   e-118
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop...   426   e-117
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   426   e-116
ref|XP_006471141.1| PREDICTED: tRNA pseudouridine synthase-like ...   425   e-116
ref|XP_006431657.1| hypothetical protein CICLE_v10001491mg [Citr...   424   e-116
ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arab...   424   e-116

>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
            gi|297739525|emb|CBI29707.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  468 bits (1204), Expect = e-129
 Identities = 234/327 (71%), Positives = 263/327 (80%), Gaps = 30/327 (9%)
 Frame = -1

Query: 891  KKXNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTD 712
            K   QNPR+QRYLVA+EYIGTRF G Q+Q NCRTV GAL++AF+KFIG PVS+ CSSRTD
Sbjct: 53   KTMTQNPRVQRYLVAVEYIGTRFSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRTD 112

Query: 711  AGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPA 532
            AGVHALSNVCHVDVERISKRKPGEVL PHEPAVVR+AVNHFL KNE GD+MVIDVRCVP 
Sbjct: 113  AGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNE-GDVMVIDVRCVPP 171

Query: 531  DFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSF 352
            DFHARY+ARERTYFYRLLSG EPLSSFEKDRAWH+P+DLDL+++QKACRVLVG HDFSSF
Sbjct: 172  DFHARYKARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSF 231

Query: 351  RAAGCQAKSPIRNLDQLDVSEVVSTPFISNVDGNGSLNGETE------------------ 226
            RAAGCQAKSPIR LD+L VSEV+ TP+  ++      N   E                  
Sbjct: 232  RAAGCQAKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTA 291

Query: 225  ------------QGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEK 82
                        QGFG+RRRHRC++VTAR RSFLYHQVRLLVGV+KCVGTG+L +SDVE+
Sbjct: 292  NHDRLDGFNGAGQGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVER 351

Query: 81   ILKAKSVSAASPMAPACGLYLGRVKYD 1
            IL AK+V+AASPMAPACGLYLG V YD
Sbjct: 352  ILNAKTVTAASPMAPACGLYLGNVNYD 378


>ref|XP_007041228.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508705163|gb|EOX97059.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  460 bits (1183), Expect = e-127
 Identities = 234/339 (69%), Positives = 264/339 (77%), Gaps = 32/339 (9%)
 Frame = -1

Query: 921  KSQESTTRKKKKXNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGP 742
            + +E   +++   ++NPRIQRYLVAIEYIGTRF G Q+QPNCRTVVG LE+AF KFIG P
Sbjct: 32   EEEEDKQQQESSMSKNPRIQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQP 91

Query: 741  VSVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDL 562
            VS+ CSSRTDAGVHALSNVCHVDVERISKRKPGEVL PHEP+VVR+AVNHFL K+E GD+
Sbjct: 92   VSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSE-GDI 150

Query: 561  MVIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRV 382
             VIDVRCVP DFHARY+A+ERTYFYRLLSG EPLS+FEK+RAWH+P+ LDL ++Q+AC+V
Sbjct: 151  TVIDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKV 210

Query: 381  LVGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVSTPF----------------------- 271
            LVG HDFSSFRAAGCQAKSPIR LD+L VSE   TP+                       
Sbjct: 211  LVGHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSRE 270

Query: 270  ---------ISNVDGNGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCV 118
                      SN D     NG T+ GFGIRRRH CYVVTAR RSFLYHQVRLLVGVLKCV
Sbjct: 271  PEIDLPIDSFSNSDDEVGSNGITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCV 330

Query: 117  GTGELKISDVEKILKAKSVSAASPMAPACGLYLGRVKYD 1
            GTGEL  SDVE+IL AK+V+AASPMAPA GLYLG VKYD
Sbjct: 331  GTGELTTSDVERILNAKTVTAASPMAPAYGLYLGCVKYD 369


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca subsp.
            vesca]
          Length = 350

 Score =  458 bits (1178), Expect = e-126
 Identities = 228/333 (68%), Positives = 272/333 (81%), Gaps = 22/333 (6%)
 Frame = -1

Query: 933  KSPLKSQESTTRKKKKXNQNPR--IQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFY 760
            K P K  ++T+ + +  + +    IQRYL+AIEYIGTRF G Q+Q NCRTVVG LE+AF 
Sbjct: 17   KRPSKISKTTSEEAEAESMSKPQGIQRYLIAIEYIGTRFSGSQQQSNCRTVVGVLEEAFR 76

Query: 759  KFIGGPVSVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHK 580
            KFIG PVS+ CSSRTDAGVHALSNVCHVD+ERISKRKPGEVL PHEP VV++AVNHFL K
Sbjct: 77   KFIGQPVSIFCSSRTDAGVHALSNVCHVDIERISKRKPGEVLPPHEPIVVQRAVNHFLQK 136

Query: 579  NEGGDLMVIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSI 400
            NE GD+MV+DVR VPADFHAR++A+ERTYFYRLLSG EPLS+FEKDRAWHIP++LD++++
Sbjct: 137  NE-GDVMVVDVRSVPADFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHIPEELDVLAM 195

Query: 399  QKACRVLVGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVSTPFISNV------------- 259
            Q+AC++LVG HDFSSFRAAGCQAKSPIR LD+L+VSEVVS+P    +             
Sbjct: 196  QEACKILVGHHDFSSFRAAGCQAKSPIRTLDELNVSEVVSSPNFPTIAERTRNLVQKDIQ 255

Query: 258  -------DGNGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELK 100
                   D + S NG T+QGFG+R++HRC VVTAR R+FLYHQVRLLVGVLKCVGTG+LK
Sbjct: 256  CTNNPEADCHSSFNGGTDQGFGLRKKHRCIVVTARARAFLYHQVRLLVGVLKCVGTGDLK 315

Query: 99   ISDVEKILKAKSVSAASPMAPACGLYLGRVKYD 1
            I DVE+IL AK+V+AASPMAPACGLYLG V+YD
Sbjct: 316  IPDVERILNAKTVTAASPMAPACGLYLGHVRYD 348


>ref|XP_007041230.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
            gi|508705165|gb|EOX97061.1| Pseudouridine synthase family
            protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  455 bits (1171), Expect = e-125
 Identities = 232/339 (68%), Positives = 261/339 (76%), Gaps = 32/339 (9%)
 Frame = -1

Query: 921  KSQESTTRKKKKXNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGP 742
            + +E   +++   ++NPRIQRYLVAIEYIGTRF G Q+QPNCRTVVG LE+AF KFIG P
Sbjct: 32   EEEEDKQQQESSMSKNPRIQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQP 91

Query: 741  VSVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDL 562
            VS+ CSSRTDAGVHALSNVCHVDVERISKRKPGEVL PHEP+VVR+AVNHFL     GD+
Sbjct: 92   VSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQSE--GDI 149

Query: 561  MVIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRV 382
             VIDVRCVP DFHARY+A+ERTYFYRLLSG EPLS+FEK+RAWH+P+ LDL ++Q+AC+V
Sbjct: 150  TVIDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKV 209

Query: 381  LVGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVSTPF----------------------- 271
            LVG HDFSSFRAAGCQAKSPIR LD+L VSE   TP+                       
Sbjct: 210  LVGHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSRE 269

Query: 270  ---------ISNVDGNGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCV 118
                      SN D     NG T+ GFGIRRRH CYVVTAR RSFLYHQVRLLVGVLKCV
Sbjct: 270  PEIDLPIDSFSNSDDEVGSNGITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCV 329

Query: 117  GTGELKISDVEKILKAKSVSAASPMAPACGLYLGRVKYD 1
            GTGEL  SDVE+IL AK+V+AASPMAPA GLYLG VKYD
Sbjct: 330  GTGELTTSDVERILNAKTVTAASPMAPAYGLYLGCVKYD 368


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
            tuberosum]
          Length = 389

 Score =  451 bits (1160), Expect = e-124
 Identities = 228/340 (67%), Positives = 264/340 (77%), Gaps = 32/340 (9%)
 Frame = -1

Query: 924  LKSQESTTRKKKKXNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGG 745
            L+ +E      +  N NPR+QRYL+AIEYIGTRF G Q+QPNCRTVVG L++AF KF+G 
Sbjct: 43   LEGEEQKESVTRTMNPNPRLQRYLIAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFVGQ 102

Query: 744  PVSVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGD 565
            PVSV CSSRTDAGVHALSNVCHVDVERISKRKPG+VL PHEP VV++AVNHFL KNE GD
Sbjct: 103  PVSVFCSSRTDAGVHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNE-GD 161

Query: 564  LMVIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACR 385
            +MVIDVRCVPADFHARY+A+ERTYFYRLLSG E +SSFE+DRAWH+P++LDL+++QKAC 
Sbjct: 162  IMVIDVRCVPADFHARYKAQERTYFYRLLSGPESVSSFERDRAWHVPENLDLLAMQKACN 221

Query: 384  VLVGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVSTPFISNV------------------ 259
            +L+GRHDFSSFRAA CQA SPIR LD+L+V EVVSTPF  ++                  
Sbjct: 222  ILIGRHDFSSFRAAACQANSPIRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVSLG 281

Query: 258  -DGNGS-------------LNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKC 121
             D N S              NGE  Q FG+RRRHRC+VVTAR RSFLYHQVRLLVGVLK 
Sbjct: 282  SDTNHSQISLNTNEEKLEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKS 341

Query: 120  VGTGELKISDVEKILKAKSVSAASPMAPACGLYLGRVKYD 1
            VG G L   DV++IL+AKS++AA PMAPACGLYLG VKYD
Sbjct: 342  VGAGVLTDPDVKRILEAKSITAAPPMAPACGLYLGHVKYD 381


>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 389

 Score =  451 bits (1159), Expect = e-124
 Identities = 229/339 (67%), Positives = 264/339 (77%), Gaps = 32/339 (9%)
 Frame = -1

Query: 921  KSQESTTRKKKKXNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGP 742
            + +ES TR     N NPR+QRYL+AIEYIGTRF G Q+QPNCRTVVG L++AF KFIG P
Sbjct: 47   EQKESVTRTM---NPNPRLQRYLLAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFIGQP 103

Query: 741  VSVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDL 562
            VSV CSSRTDAGVHALSNVCHVDVERISKRKPG+VL PHEP VV++AVNHFL KN  GD+
Sbjct: 104  VSVFCSSRTDAGVHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKN-AGDI 162

Query: 561  MVIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRV 382
            MVIDVRCVP DFHARY+A+ERTYFYRLLSG EP+SSFE+DRAWH+P++LDL+++QKAC +
Sbjct: 163  MVIDVRCVPDDFHARYKAQERTYFYRLLSGPEPVSSFERDRAWHVPENLDLLAMQKACNI 222

Query: 381  LVGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVSTPFISNVD------------------ 256
            L+GRHDFSSFRAA CQA SPIR LD+L+V EVVSTPF  ++                   
Sbjct: 223  LIGRHDFSSFRAAACQANSPIRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVYLGS 282

Query: 255  -----------GNGSL---NGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCV 118
                         G L   NGE  Q FG+RRRHRC+VVTAR RSFLYHQVRLLVGVLK V
Sbjct: 283  DTNHSQISFNTNEGKLEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSV 342

Query: 117  GTGELKISDVEKILKAKSVSAASPMAPACGLYLGRVKYD 1
            G G+L   DV++IL+AKS++AA PMAPACGLYLG VKYD
Sbjct: 343  GAGDLTDPDVKRILEAKSIAAAPPMAPACGLYLGHVKYD 381


>gb|EYU26478.1| hypothetical protein MIMGU_mgv1a018737mg [Mimulus guttatus]
          Length = 374

 Score =  449 bits (1155), Expect = e-124
 Identities = 227/330 (68%), Positives = 264/330 (80%), Gaps = 23/330 (6%)
 Frame = -1

Query: 921  KSQESTTRKKKKXNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGP 742
            + +E+    +K    NPRIQRYLVAIEY+GTRF G Q+QP  RTVVG LEDAF KFIG P
Sbjct: 41   EEEEAGEFAEKSMVPNPRIQRYLVAIEYLGTRFSGAQQQPTGRTVVGVLEDAFQKFIGQP 100

Query: 741  VSVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDL 562
            VS+ CSSRTDAGVHALSNVCHVD+ER SKRKPGEVL PHEP+VV+ AVNHFL KNE GD+
Sbjct: 101  VSIFCSSRTDAGVHALSNVCHVDIERTSKRKPGEVLPPHEPSVVKSAVNHFLQKNE-GDM 159

Query: 561  MVIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRV 382
            MVIDV+CVPADFH+RY+A+ERTYFYRLLSG EPLS+FEK+RAWH+P++LD++S+QKAC+V
Sbjct: 160  MVIDVKCVPADFHSRYKAQERTYFYRLLSGMEPLSTFEKNRAWHVPEELDILSMQKACQV 219

Query: 381  LVGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVSTPF-------------------ISNV 259
            L+GRHDFSSFRA+ CQAKSPI+ LD+L V+EV S  +                   ISN 
Sbjct: 220  LIGRHDFSSFRASACQAKSPIKTLDELSVTEVASGTYFPSPAERKQSNYTTEGLVSISNK 279

Query: 258  DGNGSLN----GETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISD 91
                S+N    GE  QGFGIR+RHRC VVTARGRSFLYHQVRLLVGVLK VGTG+L +SD
Sbjct: 280  SETDSVNGNSVGEAIQGFGIRKRHRCIVVTARGRSFLYHQVRLLVGVLKSVGTGDLTVSD 339

Query: 90   VEKILKAKSVSAASPMAPACGLYLGRVKYD 1
            VE+ILKAK +  ASPMAPA GLYLG+VKYD
Sbjct: 340  VERILKAKDIRTASPMAPAGGLYLGQVKYD 369


>ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
           gi|557095305|gb|ESQ35887.1| hypothetical protein
           EUTSA_v10007981mg [Eutrema salsugineum]
          Length = 368

 Score =  446 bits (1146), Expect = e-122
 Identities = 223/315 (70%), Positives = 260/315 (82%), Gaps = 21/315 (6%)
 Frame = -1

Query: 882 NQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAGV 703
           + NPR+QRYLVAIEYIGTRF G Q+Q   RTVVG L++AF+KFIG PV + CSSRTDAGV
Sbjct: 53  SMNPRVQRYLVAIEYIGTRFSGSQQQATDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGV 112

Query: 702 HALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADFH 523
           HALSNVCHVDVERISKRKPGEVL PHEP VV++AVNHFL +N+G D+MVIDVRCVP+++H
Sbjct: 113 HALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDG-DVMVIDVRCVPSNYH 171

Query: 522 ARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRAA 343
           ARY+ARERTYFYRLLSG +PLS  EKDRAWH+P++LDL S+Q+ACRVLVG HDFSSFRAA
Sbjct: 172 ARYKARERTYFYRLLSGSDPLSILEKDRAWHVPEELDLRSMQEACRVLVGTHDFSSFRAA 231

Query: 342 GCQAKSPIRNLDQLDVSEVVSTPFISNVD-------GNG-----SLNGETEQG------- 220
           GCQAKSPIR+LD+L+V+EV STP+  ++         NG     S   +TE         
Sbjct: 232 GCQAKSPIRSLDELNVTEVPSTPYFPSITERTPSYLNNGDPLACSSQAKTETAGVSTDGG 291

Query: 219 --FGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAASP 46
             FG+RRRHRCYVVTARGR+FLYHQVRLLV  LKCVGTGEL +SDVE+ILKAK+V+AA P
Sbjct: 292 DTFGVRRRHRCYVVTARGRAFLYHQVRLLVAALKCVGTGELTVSDVERILKAKTVTAAKP 351

Query: 45  MAPACGLYLGRVKYD 1
           MAPACGLYL RVKY+
Sbjct: 352 MAPACGLYLARVKYE 366


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  440 bits (1131), Expect = e-121
 Identities = 219/306 (71%), Positives = 250/306 (81%), Gaps = 12/306 (3%)
 Frame = -1

Query: 882 NQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAGV 703
           N  P IQRYLVA+EYIGTRF+G Q+QPNCRTVVGALE+AF KFIG PVSV CSSRTDAGV
Sbjct: 42  NPKPGIQRYLVAVEYIGTRFYGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRTDAGV 101

Query: 702 HALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADFH 523
           HALSNVCHVDVERISKRKPGEVL PHEP VV KAVNHFL K+E GD+ V+DVR VP DFH
Sbjct: 102 HALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVNHFLQKHE-GDVTVVDVRSVPNDFH 160

Query: 522 ARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRAA 343
           ARY+A+ERTYFYRL+SG E LSSFEKDRAWH+P+ L++ ++Q+AC+VLVG HDFSSFRAA
Sbjct: 161 ARYKAQERTYFYRLVSGPEALSSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAA 220

Query: 342 GCQAKSPIRNLDQLDVSEVVSTPFISNVDGNGSLNGETEQ------------GFGIRRRH 199
           GCQA SPIR LD+L+V EV STP+           G+ E             GFGIRRRH
Sbjct: 221 GCQANSPIRTLDELNVCEVASTPYFPTSMERKQRQGKEESEIEVPCSETCEVGFGIRRRH 280

Query: 198 RCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAASPMAPACGLYL 19
           RC+VVTAR RSFLYHQVRL+VGVLK VG+G+L + DV +IL+AK+VS+A PMAPACGLYL
Sbjct: 281 RCFVVTARARSFLYHQVRLMVGVLKAVGSGDLTVGDVGRILEAKNVSSARPMAPACGLYL 340

Query: 18  GRVKYD 1
           G VKYD
Sbjct: 341 GHVKYD 346


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  434 bits (1117), Expect = e-119
 Identities = 225/338 (66%), Positives = 259/338 (76%), Gaps = 32/338 (9%)
 Frame = -1

Query: 918  SQESTTRKKKKXNQNPR--IQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGG 745
            S      +++  +QNPR  IQRYLVAIEYIGT F G QKQ N RTVVGALE+AF KF+G 
Sbjct: 29   SDSDIDEEEEGMSQNPRNGIQRYLVAIEYIGTLFSGSQKQLNVRTVVGALEEAFSKFVGQ 88

Query: 744  PVSVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGD 565
            PVSVSCSSRTDAGVHALSNVCHVD++RISKR+PGEVL PHEPAVV +AVNHFL K++  D
Sbjct: 89   PVSVSCSSRTDAGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDS-D 147

Query: 564  LMVIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACR 385
            LMVIDVRCVP+DFHAR++A+ERTYFYRLLSG EPLS+FEKDRAWH+P++L L ++Q+ACR
Sbjct: 148  LMVIDVRCVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACR 207

Query: 384  VLVGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVSTPF---------------------- 271
            VLVG HDFSSFRAAGCQAKSPIR LD+L V+EV+ +P+                      
Sbjct: 208  VLVGCHDFSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSN 267

Query: 270  --------ISNVDGNGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVG 115
                    ISN   +  +    + GFG RRRHRC VVTAR RSFLYHQVRLLVGVLK  G
Sbjct: 268  NTETDIPPISNPSIDKVITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAG 327

Query: 114  TGELKISDVEKILKAKSVSAASPMAPACGLYLGRVKYD 1
            TG L I DVE+IL AK+V+AASPMAPACGLYLG VKYD
Sbjct: 328  TGNLTIPDVERILNAKTVTAASPMAPACGLYLGEVKYD 365


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 372

 Score =  434 bits (1115), Expect = e-119
 Identities = 223/324 (68%), Positives = 255/324 (78%), Gaps = 30/324 (9%)
 Frame = -1

Query: 882  NQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAGV 703
            + NP++QRYL+A+EYIGT+F G QKQ N RTVVG LE+AF KFIG  VSVS SSRTDAGV
Sbjct: 48   SSNPKLQRYLIAVEYIGTKFAGSQKQLNGRTVVGVLEEAFCKFIGQQVSVSLSSRTDAGV 107

Query: 702  HALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADFH 523
            HALSNVCHVD+ERISKRKPGEVL PHEPAVVR+AVNHFL KNE GD+MV DVRCVP+DFH
Sbjct: 108  HALSNVCHVDIERISKRKPGEVLPPHEPAVVRRAVNHFLQKNE-GDIMVTDVRCVPSDFH 166

Query: 522  ARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRAA 343
            AR++A+ERTYFYR LSG EPLS+FEKDRAWH+ +DLD+V++Q+AC+VLVG HDFSSFRA+
Sbjct: 167  ARFKAQERTYFYRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRAS 226

Query: 342  GCQAKSPIRNLDQLDVSEVVSTPFI------------------------------SNVDG 253
            GCQAKSPIR L ++ VSEV ST +                               SN + 
Sbjct: 227  GCQAKSPIRTLAEISVSEVASTLYFPSITEREQNCENGENSCCKKFKTDLPMGSHSNTNV 286

Query: 252  NGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILK 73
              S  GET+ GFGIRRRHRC+VVTAR RSFLYHQVRLLVGVLK VG G+L  SDVE+IL 
Sbjct: 287  AESSFGETDLGFGIRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGIGDLTTSDVERILS 346

Query: 72   AKSVSAASPMAPACGLYLGRVKYD 1
            AKSV+AASPMAPA GLYLG VKYD
Sbjct: 347  AKSVTAASPMAPARGLYLGHVKYD 370


>ref|XP_007148561.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
            gi|561021784|gb|ESW20555.1| hypothetical protein
            PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  433 bits (1114), Expect = e-119
 Identities = 226/337 (67%), Positives = 262/337 (77%), Gaps = 32/337 (9%)
 Frame = -1

Query: 915  QESTTRKKKKXNQNPR--IQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGP 742
            ++    ++K+  QNPR  IQRY +AIEYIGTRF G QKQ  CRTVVGALE+AF KF+G P
Sbjct: 34   EDDEEEEEKEMTQNPRNGIQRYFLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHP 93

Query: 741  VSVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDL 562
            VSVSCSSRTDAGVHALSNVCHVD++R SKRKPGEVL PHEPAVV +AVNHFL K++  DL
Sbjct: 94   VSVSCSSRTDAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQKHD-SDL 152

Query: 561  MVIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRV 382
             VIDVRCVP+DFHARY+A ERTYFYRLLSG EPLS+FEKDRAWH+ ++L+L ++Q+ACRV
Sbjct: 153  TVIDVRCVPSDFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRV 212

Query: 381  LVGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVST---PFISNVDGNGSL---------N 238
            LVG HDFSSFRAAGCQAKSPIR LD+L+VSEV+ +   P + + +G+  +         N
Sbjct: 213  LVGSHDFSSFRAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSN 272

Query: 237  GET------------------EQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGT 112
             ET                  + GFG RRRHRC VVTAR RSFLYHQVRLLVGVLK VGT
Sbjct: 273  SETDIPPSSSPCIDKVTTSSEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGT 332

Query: 111  GELKISDVEKILKAKSVSAASPMAPACGLYLGRVKYD 1
            G L I DVE+IL AKSV++ASPMAPACGLYLG VKYD
Sbjct: 333  GNLTIPDVERILNAKSVTSASPMAPACGLYLGEVKYD 369


>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
            gi|550312358|gb|ERP48449.1| hypothetical protein
            POPTR_0022s00690g [Populus trichocarpa]
          Length = 370

 Score =  431 bits (1109), Expect = e-118
 Identities = 222/338 (65%), Positives = 258/338 (76%), Gaps = 32/338 (9%)
 Frame = -1

Query: 918  SQESTTRKKKKXNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPV 739
            S+E   ++    +  P +QRYLVA+EYIGTRF G Q+Q N RTVVG L++AF+KFIG PV
Sbjct: 32   SEEEEEKEAVDKSMKPGLQRYLVAVEYIGTRFCGSQQQLNHRTVVGVLQEAFHKFIGQPV 91

Query: 738  SVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLM 559
            ++  SSRTDAGVHALSNVCHVDVERISKRKPGEVL PHEPAVVRKAVNHFL K E GD+M
Sbjct: 92   TICLSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKKE-GDIM 150

Query: 558  VIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVL 379
            V DVR VPA FHAR++A+ERTYFYRLL G E LS+FEKDRAWH+ ++LDLVS+Q+AC+VL
Sbjct: 151  VTDVRSVPAHFHARFKAQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVL 210

Query: 378  VGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVSTPF------------------------ 271
            VG HDFSSFRA+GCQAKSP R L++L V EVVSTP+                        
Sbjct: 211  VGHHDFSSFRASGCQAKSPFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKC 270

Query: 270  --------ISNVDGNGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVG 115
                    ISN    G  N  T+ GFGIRRRHRCYV+TAR RSFLYHQVRLLVGVLK VG
Sbjct: 271  KTGLPTGSISNGFMAGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVG 330

Query: 114  TGELKISDVEKILKAKSVSAASPMAPACGLYLGRVKYD 1
            TG+L +SDVE+IL A+S++AASPMAPACGLYLG VKY+
Sbjct: 331  TGDLTVSDVERILNARSITAASPMAPACGLYLGHVKYE 368


>ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X1
           [Citrus sinensis]
          Length = 383

 Score =  430 bits (1105), Expect = e-118
 Identities = 219/305 (71%), Positives = 254/305 (83%), Gaps = 13/305 (4%)
 Frame = -1

Query: 876 NPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAGVHA 697
           N RIQRYL+A+EYIGTRF G QKQ NCRTVVG LE+AF+KFIG PVS+S SSRTDAGVHA
Sbjct: 54  NKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAGVHA 113

Query: 696 LSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADFHAR 517
            SNVCHVDVERISKRKPGEVL PH+ +VVR+AVNHFL K+E GD+MV DVRCVP+DFHAR
Sbjct: 114 ASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQKSE-GDIMVTDVRCVPSDFHAR 172

Query: 516 YEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRAAGC 337
           + A+ERTYFYR+LSG EPLS FEKDRAWH+ ++LDL ++Q+AC+VLVG HDFSSFRA+GC
Sbjct: 173 FRAQERTYFYRILSGPEPLSVFEKDRAWHVTEELDLRAMQEACKVLVGCHDFSSFRASGC 232

Query: 336 QAKSPIRNLDQLDVSEVVST----------PFISNVDGNGSL---NGETEQGFGIRRRHR 196
           QA SPIR LD+L VSEVVST          P +S++D +  L   NG +   FGIR++HR
Sbjct: 233 QANSPIRTLDELHVSEVVSTALFPSINQDSPVLSSIDNSSKLGMPNGGSNV-FGIRKKHR 291

Query: 195 CYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAASPMAPACGLYLG 16
            Y V AR RSFLYHQVRL+VGVLK VGTGEL +SDVE+ILKAK+V+AASPMAPACGL LG
Sbjct: 292 SYEVIARARSFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKTVTAASPMAPACGLSLG 351

Query: 15  RVKYD 1
            VKYD
Sbjct: 352 FVKYD 356


>ref|XP_007148560.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
            gi|561021783|gb|ESW20554.1| hypothetical protein
            PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 372

 Score =  430 bits (1105), Expect = e-118
 Identities = 225/337 (66%), Positives = 260/337 (77%), Gaps = 32/337 (9%)
 Frame = -1

Query: 915  QESTTRKKKKXNQNPR--IQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGP 742
            ++    ++K+  QNPR  IQRY +AIEYIGTRF G QKQ  CRTVVGALE+AF KF+G P
Sbjct: 34   EDDEEEEEKEMTQNPRNGIQRYFLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHP 93

Query: 741  VSVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDL 562
            VSVSCSSRTDAGVHALSNVCHVD++R SKRKPGEVL PHEPAVV +AVNHFL  +   DL
Sbjct: 94   VSVSCSSRTDAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQHD--SDL 151

Query: 561  MVIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRV 382
             VIDVRCVP+DFHARY+A ERTYFYRLLSG EPLS+FEKDRAWH+ ++L+L ++Q+ACRV
Sbjct: 152  TVIDVRCVPSDFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRV 211

Query: 381  LVGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVST---PFISNVDGNGSL---------N 238
            LVG HDFSSFRAAGCQAKSPIR LD+L+VSEV+ +   P + + +G+  +         N
Sbjct: 212  LVGSHDFSSFRAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSN 271

Query: 237  GET------------------EQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGT 112
             ET                  + GFG RRRHRC VVTAR RSFLYHQVRLLVGVLK VGT
Sbjct: 272  SETDIPPSSSPCIDKVTTSSEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGT 331

Query: 111  GELKISDVEKILKAKSVSAASPMAPACGLYLGRVKYD 1
            G L I DVE+IL AKSV++ASPMAPACGLYLG VKYD
Sbjct: 332  GNLTIPDVERILNAKSVTSASPMAPACGLYLGEVKYD 368


>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
            gi|332190374|gb|AEE28495.1| pseudouridine synthase family
            protein [Arabidopsis thaliana]
          Length = 372

 Score =  426 bits (1096), Expect = e-117
 Identities = 214/321 (66%), Positives = 255/321 (79%), Gaps = 29/321 (9%)
 Frame = -1

Query: 876  NPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAGVHA 697
            NPR+QRYLVAIEYIGTRF G Q+Q   RTVVG L++AF+KFIG PV + CSSRTDAGVHA
Sbjct: 51   NPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHA 110

Query: 696  LSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADFHAR 517
            LSNVCHVDVERISKRKPGEVL PHEP VV++AVNHFL + + GD+MVIDVRCVP+++HAR
Sbjct: 111  LSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKD-GDVMVIDVRCVPSNYHAR 169

Query: 516  YEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRAAGC 337
            Y+A+ERTYFYRLLSG +PLS  EKDR WH+P++L+L  +Q+ACRVLVG HDFSSFRAAGC
Sbjct: 170  YKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHDFSSFRAAGC 229

Query: 336  QAKSPIRNLDQLDVSEVVSTPF--------ISNVDGN--------------------GSL 241
            QAKSP+R+LD+L+++EV STP+        +SN++                      G +
Sbjct: 230  QAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPKSETAGVTTNVGEV 289

Query: 240  NGETE-QGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKS 64
             G TE   FG RRRHRCYVVTAR R FLYHQVRL+VG LKCVGTGEL +SDVE+IL+AK+
Sbjct: 290  EGSTEGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKT 349

Query: 63   VSAASPMAPACGLYLGRVKYD 1
            VSAA PMAPA GLYL RV+Y+
Sbjct: 350  VSAAKPMAPASGLYLARVRYE 370


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
            gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  426 bits (1094), Expect = e-116
 Identities = 223/336 (66%), Positives = 261/336 (77%), Gaps = 32/336 (9%)
 Frame = -1

Query: 912  ESTTRKKKKXNQNPR--IQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPV 739
            +S   ++++  +NPR  IQRYLVAIEYIGTRF G QKQ N RTVVG LE+AF KF+G PV
Sbjct: 32   DSDIDEEEEMIKNPRNGIQRYLVAIEYIGTRFSGSQKQLNVRTVVGVLEEAFSKFVGQPV 91

Query: 738  SVSCSSRTDAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLM 559
            SVSCSSRT AGVHALSNVCHVD++RISKR+PGEVL PHEPAVV +AVNHFL K +  DLM
Sbjct: 92   SVSCSSRTVAGVHALSNVCHVDIQRISKRRPGEVLTPHEPAVVGRAVNHFLQKQDS-DLM 150

Query: 558  VIDVRCVPADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVL 379
            VIDVRCVP+DFHAR++A+ER YFYRLLSG EPLS+FEKDRAWH+P++L L ++Q+ACRVL
Sbjct: 151  VIDVRCVPSDFHARFKAQERIYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVL 210

Query: 378  VGRHDFSSFRAAGCQAKSPIRNLDQLDVSEVVSTPFISNV-------DGNGSL-----NG 235
            VG HDFSSFRAAGCQAKSPIR LD+L V+EV+ +P+  ++         +G L     N 
Sbjct: 211  VGFHDFSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNS 270

Query: 234  ET------------------EQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTG 109
            ET                  + GFG RRRHRC VVTAR R+FLYHQVRLLVGVLK VGTG
Sbjct: 271  ETDIPPTSNPSIDKVMASSQDVGFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTG 330

Query: 108  ELKISDVEKILKAKSVSAASPMAPACGLYLGRVKYD 1
             L I DVE+IL A++V+AASPMAPACGLYLG VKYD
Sbjct: 331  NLTIPDVERILNARTVTAASPMAPACGLYLGEVKYD 366


>ref|XP_006471141.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X2
           [Citrus sinensis]
          Length = 382

 Score =  425 bits (1093), Expect = e-116
 Identities = 217/305 (71%), Positives = 251/305 (82%), Gaps = 13/305 (4%)
 Frame = -1

Query: 876 NPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAGVHA 697
           N RIQRYL+A+EYIGTRF G QKQ NCRTVVG LE+AF+KFIG PVS+S SSRTDAGVHA
Sbjct: 54  NKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAGVHA 113

Query: 696 LSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADFHAR 517
            SNVCHVDVERISKRKPGEVL PH+ +VVR+AVNHFL     GD+MV DVRCVP+DFHAR
Sbjct: 114 ASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQSE--GDIMVTDVRCVPSDFHAR 171

Query: 516 YEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRAAGC 337
           + A+ERTYFYR+LSG EPLS FEKDRAWH+ ++LDL ++Q+AC+VLVG HDFSSFRA+GC
Sbjct: 172 FRAQERTYFYRILSGPEPLSVFEKDRAWHVTEELDLRAMQEACKVLVGCHDFSSFRASGC 231

Query: 336 QAKSPIRNLDQLDVSEVVST----------PFISNVDGNGSL---NGETEQGFGIRRRHR 196
           QA SPIR LD+L VSEVVST          P +S++D +  L   NG +   FGIR++HR
Sbjct: 232 QANSPIRTLDELHVSEVVSTALFPSINQDSPVLSSIDNSSKLGMPNGGSNV-FGIRKKHR 290

Query: 195 CYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAASPMAPACGLYLG 16
            Y V AR RSFLYHQVRL+VGVLK VGTGEL +SDVE+ILKAK+V+AASPMAPACGL LG
Sbjct: 291 SYEVIARARSFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKTVTAASPMAPACGLSLG 350

Query: 15  RVKYD 1
            VKYD
Sbjct: 351 FVKYD 355


>ref|XP_006431657.1| hypothetical protein CICLE_v10001491mg [Citrus clementina]
           gi|557533779|gb|ESR44897.1| hypothetical protein
           CICLE_v10001491mg [Citrus clementina]
          Length = 382

 Score =  424 bits (1091), Expect = e-116
 Identities = 217/305 (71%), Positives = 251/305 (82%), Gaps = 13/305 (4%)
 Frame = -1

Query: 876 NPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAGVHA 697
           N RIQRYL+A+EYIGTRF G QKQ NCRTVVG LE+AF+KFIG PVS+S SSRTDAGVHA
Sbjct: 54  NKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAGVHA 113

Query: 696 LSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADFHAR 517
            SNVCHVDVERISKRKPGEVL PH+ +VVR+AVNHFL     GD+MV DVRCVP+DFHAR
Sbjct: 114 ASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQSE--GDIMVTDVRCVPSDFHAR 171

Query: 516 YEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRAAGC 337
           + A+ERTYFYR+LSG EPLS FEKDRAWH+ ++LDL ++Q+AC+VLVG HDFSSFRA+GC
Sbjct: 172 FRAQERTYFYRILSGPEPLSVFEKDRAWHVTEELDLHAMQEACKVLVGCHDFSSFRASGC 231

Query: 336 QAKSPIRNLDQLDVSEVVST----------PFISNVDGN---GSLNGETEQGFGIRRRHR 196
           QA SPIR LD+L VSEVVST          P +S++D +   G  NG +   FGIR++HR
Sbjct: 232 QANSPIRTLDELHVSEVVSTALFSSINQDSPVLSSIDNSIKLGMPNGGSNV-FGIRKKHR 290

Query: 195 CYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAASPMAPACGLYLG 16
            Y V AR RSFLYHQVRL+VGVLK VGTGEL +SDVE+ILKAK+V+AASPMAPACGL LG
Sbjct: 291 SYEVIARARSFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKTVTAASPMAPACGLSLG 350

Query: 15  RVKYD 1
            VKYD
Sbjct: 351 FVKYD 355


>ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arabidopsis lyrata subsp.
            lyrata] gi|297338368|gb|EFH68785.1| hypothetical protein
            ARALYDRAFT_471082 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  424 bits (1090), Expect = e-116
 Identities = 214/321 (66%), Positives = 253/321 (78%), Gaps = 29/321 (9%)
 Frame = -1

Query: 876  NPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAGVHA 697
            NPR+QRYLVAIEYIGTRF G Q+Q   RTVVG L+DAF+KFIG PV + CSSRTDAGVHA
Sbjct: 52   NPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQDAFHKFIGQPVKIFCSSRTDAGVHA 111

Query: 696  LSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADFHAR 517
            LSNVCHVDVERISKRKPGEVL PHEP VV++AVNHFL + + GD+MVIDVRCVP+++HAR
Sbjct: 112  LSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKD-GDVMVIDVRCVPSNYHAR 170

Query: 516  YEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRAAGC 337
            Y+A+ERTYFYRLL+G +PLS  EKDR WH+P++L+  S+Q+ACRVLVG HDFSSFRAAGC
Sbjct: 171  YKAQERTYFYRLLAGSDPLSILEKDRCWHVPEELNPRSMQEACRVLVGYHDFSSFRAAGC 230

Query: 336  QAKSPIRNLDQLDVSEVVSTPFI--------SNVDGN--------------------GSL 241
            QAKSP+R LD+L+++EV STP+         SN++                      G +
Sbjct: 231  QAKSPMRYLDELNITEVPSTPYFPSITERAWSNLNNGDPLACSSQPKSETAGVTTNVGEV 290

Query: 240  NGETE-QGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKS 64
             G T+   FG RRRHRCYVVTAR R FLYHQVRL+VG LKCVGTGEL +SDVE+IL+AK+
Sbjct: 291  EGSTDGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKT 350

Query: 63   VSAASPMAPACGLYLGRVKYD 1
            VSAA PMAPA GLYL RVKY+
Sbjct: 351  VSAAKPMAPASGLYLARVKYE 371