BLASTX nr result
ID: Paeonia24_contig00014644
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00014644
(652 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prun... 132 1e-58
ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, part... 128 2e-58
ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, part... 120 1e-41
gb|ABD63115.1| hypothetical protein 18.t00011 [Asparagus officin... 83 1e-31
gb|ABD63147.1| Integrase core domain containing protein [Asparag... 117 4e-28
ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, part... 130 5e-28
ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, part... 116 5e-24
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 78 8e-22
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 78 8e-22
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 78 1e-21
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 78 2e-21
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 78 2e-21
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 78 3e-21
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 78 4e-21
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 78 5e-21
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 77 5e-21
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 77 7e-21
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 78 9e-21
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 78 1e-20
ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756... 80 2e-20
>ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prunus persica]
gi|462415599|gb|EMJ20336.1| hypothetical protein
PRUPE_ppa015965mg [Prunus persica]
Length = 1484
Score = 132 bits (331), Expect(3) = 1e-58
Identities = 65/105 (61%), Positives = 78/105 (74%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
ES SMDF+GG TK G+DYLF+VVD FSK +I IPC +TGEGAAKLFFQHVWK+ L
Sbjct: 1135 ESISMDFLGGLPKTKSGNDYLFVVVDRFSKMVILIPCKKTVTGEGAAKLFFQHVWKYFGL 1194
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
TSIIS ++ FL H W++LW +MDTRLKRS + P DGQT+
Sbjct: 1195 PTSIISDRDSRFLGHFWRSLWEMMDTRLKRS--TTFHPQTDGQTE 1237
Score = 103 bits (256), Expect(3) = 1e-58
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR MVHLL+GYNSK PKTWDESLPYLQFAFNR +HG TLKS FEVCL +LPQS
Sbjct: 1234 GQTEVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCLGYLPQS 1292
Score = 39.3 bits (90), Expect(3) = 1e-58
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +2
Query: 41 KMQDNVSRYLRGSVLCNTPKTSNRK 115
KM +VSRY+RG VLCNT K SNRK
Sbjct: 1096 KMHLDVSRYIRGCVLCNTSKPSNRK 1120
>ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, partial [Prunus persica]
gi|462398849|gb|EMJ04517.1| hypothetical protein
PRUPE_ppa019964mg, partial [Prunus persica]
Length = 1488
Score = 128 bits (321), Expect(3) = 2e-58
Identities = 64/105 (60%), Positives = 77/105 (73%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
ES SMDF+GG TK G+DYLF+VVD FSK +I IPC +TGEGAAKLFFQHVWK+ L
Sbjct: 1137 ESISMDFLGGLPKTKSGNDYLFVVVDRFSKMVILIPCKKTVTGEGAAKLFFQHVWKYFGL 1196
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
TSIIS ++ FL H W++LW +MDTRLKRS + DGQT+
Sbjct: 1197 PTSIISDRDSRFLGHFWRSLWEMMDTRLKRS--TAFHLQTDGQTE 1239
Score = 103 bits (256), Expect(3) = 2e-58
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR MVHLL+GYNSK PKTWDESLPYLQFAFNR +HG TLKS FEVCL +LPQS
Sbjct: 1236 GQTEVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCLGYLPQS 1294
Score = 42.4 bits (98), Expect(3) = 2e-58
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = +2
Query: 41 KMQDNVSRYLRGSVLCNTPKTSNRKQARIAFAILPLLVRIRHWRA 175
KM +VSRY+RG VLCNT K SNRK LPL V R W +
Sbjct: 1098 KMHLDVSRYIRGCVLCNTSKPSNRKLG----LYLPLPVPSRPWES 1138
>ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, partial [Prunus persica]
gi|462423886|gb|EMJ28149.1| hypothetical protein
PRUPE_ppa025194mg, partial [Prunus persica]
Length = 1347
Score = 120 bits (302), Expect(3) = 1e-41
Identities = 59/109 (54%), Positives = 75/109 (68%)
Frame = +1
Query: 121 KDCICHFASTSTYQTLESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGE 300
+ C+ S + + L SMDF+GG TK G+DYLF+VVD FSK +I IPC +TGE
Sbjct: 1035 RGCVLCNISKPSNRKLGLISMDFLGGLPKTKSGNDYLFVVVDRFSKMVILIPCKKTVTGE 1094
Query: 301 GAAKLFFQHVWKHLWLLTSIISVWNNMFLSHLWKALWRIMDTRLKRSPL 447
GAAKLFFQHVWK+ L TSIIS ++ FL H W++LW +MDTRL + L
Sbjct: 1095 GAAKLFFQHVWKYFGLHTSIISDRDSRFLGHFWRSLWEMMDTRLNKKIL 1143
Score = 72.8 bits (177), Expect(3) = 1e-41
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +2
Query: 536 PKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
PKTWDESLPYLQFAFNR +HG TLKS FEVCL +LPQS
Sbjct: 1149 PKTWDESLPYLQFAFNRAIHGSTLKSPFEVCLGYLPQS 1186
Score = 23.5 bits (49), Expect(3) = 1e-41
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3
Query: 3 KTLLNLQRYLY 35
KTLLNL+RY+Y
Sbjct: 1012 KTLLNLRRYVY 1022
>gb|ABD63115.1| hypothetical protein 18.t00011 [Asparagus officinalis]
Length = 887
Score = 83.2 bits (204), Expect(2) = 1e-31
Identities = 35/59 (59%), Positives = 45/59 (76%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR ++++L+GYN K PK WDESLPYLQF FNR +HG + KS FE C FLP S
Sbjct: 650 GQTEVVNRTIIYMLRGYNFKHPKIWDESLPYLQFVFNRAIHGSSGKSPFETCYGFLPSS 708
Score = 80.1 bits (196), Expect(2) = 1e-31
Identities = 39/76 (51%), Positives = 49/76 (64%)
Frame = +1
Query: 256 KKMIFIPCTNKLTGEGAAKLFFQHVWKHLWLLTSIISVWNNMFLSHLWKALWRIMDTRLK 435
K +I IPC +T AA+LFF+HVWKH L SIIS + FL H W +LW +MDTR K
Sbjct: 580 KMVILIPCKKTVTRVSAAQLFFEHVWKHFGLSNSIISDRDRRFLRHFWDSLWSLMDTRQK 639
Query: 436 RSPLSICRPMADGQTK 483
+S +I P DGQT+
Sbjct: 640 KS--TIFHPQTDGQTE 653
>gb|ABD63147.1| Integrase core domain containing protein [Asparagus officinalis]
Length = 870
Score = 117 bits (294), Expect(2) = 4e-28
Identities = 57/105 (54%), Positives = 73/105 (69%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
ES SMDF+GG + K GHDYL++VVD FSK +I IPC +TG GAA+LFF+HVWKH L
Sbjct: 497 ESISMDFLGGLPSKKCGHDYLYIVVDRFSKVVILIPCKKTVTGVGAAQLFFEHVWKHFGL 556
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+ II ++ FL H W +LW +MDT+LK+S P DGQT+
Sbjct: 557 PSLIILDRDSRFLGHFWDSLWSLMDTKLKKS--MAFHPQTDGQTE 599
Score = 33.5 bits (75), Expect(2) = 4e-28
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 569 QFAFNRVVHGFTLKSSFEVCLCFLPQSL 652
+F FNR ++G + KS FE C FLP +L
Sbjct: 599 EFTFNRAIYGSSGKSPFETCYGFLPLNL 626
>ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, partial [Prunus persica]
gi|462422461|gb|EMJ26724.1| hypothetical protein
PRUPE_ppa026504mg, partial [Prunus persica]
Length = 750
Score = 130 bits (326), Expect = 5e-28
Identities = 65/105 (61%), Positives = 75/105 (71%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
ES MDF+GG TKFG+DYLF+VVD FSK +I IPC +T EGAAKLFFQHVWKH L
Sbjct: 507 ESILMDFLGGLPKTKFGNDYLFVVVDRFSKMVILIPCKKTVTREGAAKLFFQHVWKHFGL 566
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
TSIIS + FL H W+ LW +MDTRLKRS + P DGQT+
Sbjct: 567 PTSIISDRDGRFLGHFWRLLWGMMDTRLKRS--TAFHPQTDGQTE 609
Score = 110 bits (276), Expect = 3e-22
Identities = 84/212 (39%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Frame = +2
Query: 41 KMQDNVSRYLRGSVLCNTPKTSNRKQARIAFAILPLLVRIRHWRAPPWISLEDGQIPSLG 220
KM +VSRY+RG LCNT K SN+K LPL V R W + L G +P
Sbjct: 468 KMHLDVSRYIRGCALCNTSKPSNKKLG----LYLPLPVPSRPWESILMDFL--GGLPKTK 521
Query: 221 MIICLWWSTVS--ARR*FLFRARISLQEREPLNYFSSMYGSTSGF*HRLFRFGITCF*VI 394
+ V ++ L + ++ F F H FG+ +
Sbjct: 522 FGNDYLFVVVDRFSKMVILIPCKKTVTREGAAKLF---------FQHVWKHFGLPTSIIS 572
Query: 395 Y--GKPFGGSWTL-----D*RGVRFPSADRWPMGRQKIVNRIMVHLLKGYNSKQPKTWDE 553
G+ G W L D R R + G+ ++VNR MVHLL GYNSK P+TWDE
Sbjct: 573 DRDGRFLGHFWRLLWGMMDTRLKRSTAFHPQTDGQTEVVNRTMVHLLWGYNSKHPRTWDE 632
Query: 554 SLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
SLPYLQFAFNR +HG TLKS FEVCL +LPQS
Sbjct: 633 SLPYLQFAFNRAIHGSTLKSPFEVCLGYLPQS 664
>ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, partial [Prunus persica]
gi|462421192|gb|EMJ25455.1| hypothetical protein
PRUPE_ppa018408mg, partial [Prunus persica]
Length = 1440
Score = 116 bits (291), Expect = 5e-24
Identities = 87/204 (42%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Frame = +2
Query: 41 KMQDNVSRYLRGSVLCNTPKTSNRKQARIAFAILPLLVRIRHWRAPPWISLEDGQIPSLG 220
K+ +VSRY+RG VLCNT K SNRK LPL V R W + IS++
Sbjct: 1098 KIHLDVSRYIRGCVLCNTSKPSNRKLG----LYLPLPVPSRPWES---ISMD-------- 1142
Query: 221 MIICLWWSTVSARR*FLFRARISLQEREPLNYFSSMYGSTSGF*HRLFRFGITCF*VIYG 400
FL A++ Q YF TS R RF G
Sbjct: 1143 ---------------FLGAAKLFFQH--VWKYFGL---PTSIIFDRDSRF--------LG 1174
Query: 401 KPFGGSWTL-D*RGVRFPSADRWPMGRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFA 577
+ W + D R R + G+ ++VNR MVHLL+GYNSK PKTWDESLPYLQFA
Sbjct: 1175 HFWRSLWEMMDTRLKRSTAFHPQTDGQTEVVNRTMVHLLRGYNSKHPKTWDESLPYLQFA 1234
Query: 578 FNRVVHGFTLKSSFEVCLCFLPQS 649
FNR +HG TLKS FEVCL +LPQS
Sbjct: 1235 FNRAIHGSTLKSPFEVCLGYLPQS 1258
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 78.2 bits (191), Expect(2) = 8e-22
Identities = 44/105 (41%), Positives = 57/105 (54%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF + + +
Sbjct: 1268 EDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGM 1327
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLS+ WK LW + TRL S + C P DGQT+
Sbjct: 1328 PKTIVSDRDTKFLSYFWKTLWAKLGTRLLFS--TTCHPQTDGQTE 1370
Score = 52.0 bits (123), Expect(2) = 8e-22
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + LL+ K K W+E LP+++FA+NR VH T FEV F P S
Sbjct: 1367 GQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLS 1425
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 78.2 bits (191), Expect(2) = 8e-22
Identities = 44/105 (41%), Positives = 57/105 (54%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF + + +
Sbjct: 236 EDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGM 295
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLS+ WK LW + TRL S + C P DGQT+
Sbjct: 296 PKTIVSDRDTKFLSYFWKTLWAKLGTRLLFS--TTCHPQTDGQTE 338
Score = 52.0 bits (123), Expect(2) = 8e-22
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + LL+ K K W+E LP+++FA+NR VH T FEV F P S
Sbjct: 335 GQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLS 393
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 78.2 bits (191), Expect(2) = 1e-21
Identities = 44/105 (41%), Positives = 57/105 (54%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF + + +
Sbjct: 236 EDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGM 295
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLS+ WK LW + TRL S + C P DGQT+
Sbjct: 296 PKTIVSDRDTKFLSYFWKTLWAKLGTRLLFS--TTCHPQTDGQTE 338
Score = 51.2 bits (121), Expect(2) = 1e-21
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLP 643
G+ ++VNR + LL+ K K W+E LP+++FA+NR VH T FEV F P
Sbjct: 335 GQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKP 391
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 78.2 bits (191), Expect(2) = 2e-21
Identities = 43/105 (40%), Positives = 58/105 (55%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF+ + + +
Sbjct: 1293 EDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGV 1352
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLSH W+ LW + T+L S + C P DGQT+
Sbjct: 1353 PNTIVSDRDTKFLSHFWRTLWAKLGTKLLFS--TTCHPQTDGQTE 1395
Score = 50.4 bits (119), Expect(2) = 2e-21
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + +L+ K K W+E LP+++FA+NR H T K FE+ LP++
Sbjct: 1392 GQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRA 1450
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 78.2 bits (191), Expect(2) = 2e-21
Identities = 43/105 (40%), Positives = 58/105 (55%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF+ + + +
Sbjct: 1293 EDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGV 1352
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLSH W+ LW + T+L S + C P DGQT+
Sbjct: 1353 PNTIVSDRDTKFLSHFWRTLWAKLGTKLLFS--TTCHPQTDGQTE 1395
Score = 50.4 bits (119), Expect(2) = 2e-21
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + +L+ K K W+E LP+++FA+NR H T K FE+ LP++
Sbjct: 1392 GQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRA 1450
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 78.2 bits (191), Expect(2) = 3e-21
Identities = 43/105 (40%), Positives = 58/105 (55%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF+ + + +
Sbjct: 1189 EDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGV 1248
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLSH W+ LW + T+L S + C P DGQT+
Sbjct: 1249 PNTIVSDRDTKFLSHFWRTLWAKLGTKLLFS--TTCHPQTDGQTE 1291
Score = 50.1 bits (118), Expect(2) = 3e-21
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + +L+ K K W+E LP+++FA+NR H T K FE+ LP++
Sbjct: 1288 GQTEVVNRTVSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRA 1346
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 78.2 bits (191), Expect(2) = 4e-21
Identities = 43/105 (40%), Positives = 58/105 (55%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF+ + + +
Sbjct: 1324 EDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGV 1383
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLSH W+ LW + T+L S + C P DGQT+
Sbjct: 1384 PNTIVSDRDAKFLSHFWRCLWAKLGTKLLFS--TTCHPQTDGQTE 1426
Score = 49.7 bits (117), Expect(2) = 4e-21
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + +L+ K W+E LP+++FA+NR +H T FE+ FLP++
Sbjct: 1423 GQTEVVNRSLSTMLRAVLKNNIKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRA 1481
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 78.2 bits (191), Expect(2) = 5e-21
Identities = 43/105 (40%), Positives = 58/105 (55%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF+ + + +
Sbjct: 1321 EDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGV 1380
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLSH W+ LW + T+L S + C P DGQT+
Sbjct: 1381 PNTIVSDRDAKFLSHFWRCLWAKLGTKLLFS--TTCHPQTDGQTE 1423
Score = 49.3 bits (116), Expect(2) = 5e-21
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + +L+ K W+E LP+++FA+NR +H T FE+ FLP++
Sbjct: 1420 GQTEVVNRSLSTMLRAVLKTNLKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRA 1478
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 76.6 bits (187), Expect(2) = 5e-21
Identities = 42/105 (40%), Positives = 57/105 (54%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF+ + + +
Sbjct: 1309 EDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAVNVADLFFREIIRLHGV 1368
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLSH W+ LW + +L S + C P DGQT+
Sbjct: 1369 PNTIVSDRDTKFLSHFWRCLWAKLGNKLLFS--TTCHPQTDGQTE 1411
Score = 50.8 bits (120), Expect(2) = 5e-21
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + +L+ K W+E LP+++FA+NR +H T FE+ FLP++
Sbjct: 1408 GQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRA 1466
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 76.6 bits (187), Expect(2) = 7e-21
Identities = 42/105 (40%), Positives = 57/105 (54%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF+ + + +
Sbjct: 1293 EDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGV 1352
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLSH W+ LW + T+ S + C P DGQT+
Sbjct: 1353 PNTIVSDRDTKFLSHFWRTLWAKLGTKFLFS--TTCHPQTDGQTE 1395
Score = 50.4 bits (119), Expect(2) = 7e-21
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + +L+ K K W+E LP+++FA+NR H T K FE+ LP++
Sbjct: 1392 GQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRA 1450
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 78.2 bits (191), Expect(2) = 9e-21
Identities = 43/105 (40%), Positives = 58/105 (55%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF+ + + +
Sbjct: 606 EDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGV 665
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLSH W+ LW + T+L S + C P DGQT+
Sbjct: 666 PNTIVSDRDTKFLSHFWRTLWAKLGTKLLFS--TTCHPQTDGQTE 708
Score = 48.5 bits (114), Expect(2) = 9e-21
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + +L+ K K W+E LP+++FA+N H T K FE+ LP++
Sbjct: 705 GQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNHSQHSTTKKCPFEIVYGLLPRA 763
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 77.8 bits (190), Expect(2) = 1e-20
Identities = 43/105 (40%), Positives = 58/105 (55%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
E SMDF+ G TK G D +F+VVD FSK FIPC A LFF+ + + +
Sbjct: 1265 EDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLHGV 1324
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
+I+S + FLSH W+ LW + T+L S + C P DGQT+
Sbjct: 1325 PNTIVSDRDTKFLSHFWRTLWAKLGTKLLFS--TTCHPQTDGQTE 1367
Score = 48.5 bits (114), Expect(2) = 1e-20
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + +L+ K K W+E LP+++FA+NR +H T F++ LP++
Sbjct: 1364 GQTEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRA 1422
Score = 58.9 bits (141), Expect(2) = 2e-10
Identities = 36/105 (34%), Positives = 52/105 (49%)
Frame = +1
Query: 169 ESTSMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWL 348
+ MDFI G T+ G+D +++VVD +K FIP G A+L+F + +
Sbjct: 2087 DEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGV 2146
Query: 349 LTSIISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
I+S + F SH WK L + TRL S + P DGQT+
Sbjct: 2147 PKKIVSDRESQFTSHFWKKLQEELGTRLNFS--TAYHPQTDGQTE 2189
Score = 33.1 bits (74), Expect(2) = 2e-10
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFN 583
G+ + +N+I+ +L KTWD+SLPY +F++N
Sbjct: 2186 GQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYN 2222
>ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756049, partial [Setaria
italica]
Length = 763
Score = 79.7 bits (195), Expect(2) = 2e-20
Identities = 43/102 (42%), Positives = 59/102 (57%)
Frame = +1
Query: 178 SMDFIGGWSNTKFGHDYLFMVVDCFSKKMIFIPCTNKLTGEGAAKLFFQHVWKHLWLLTS 357
SMDF+ G TK G D +F+VVD FSK FIPC A+LFF+ + + + +
Sbjct: 556 SMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKTDDASNVAELFFREIIRLHGIPNT 615
Query: 358 IISVWNNMFLSHLWKALWRIMDTRLKRSPLSICRPMADGQTK 483
I+S + FLSH W++LW M T+L S + C P DGQT+
Sbjct: 616 IVSDRDAKFLSHFWRSLWNKMGTKLLFS--TTCHPQTDGQTE 655
Score = 46.2 bits (108), Expect(2) = 2e-20
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +2
Query: 473 GRQKIVNRIMVHLLKGYNSKQPKTWDESLPYLQFAFNRVVHGFTLKSSFEVCLCFLPQS 649
G+ ++VNR + +L+ K K W++ LP+++FA+N H T F+V ++P++
Sbjct: 652 GQTEVVNRTLSTMLRAVLDKHLKRWEDCLPHVEFAYNHATHSSTKMRPFQVVYGYIPRA 710