BLASTX nr result
ID: Paeonia24_contig00013492
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00013492
(463 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006288186.1| hypothetical protein CARUB_v10001422mg, part... 103 3e-20
ref|XP_002873059.1| hypothetical protein ARALYDRAFT_487031 [Arab... 102 7e-20
ref|XP_006398711.1| hypothetical protein EUTSA_v10014286mg [Eutr... 99 8e-19
ref|NP_195873.2| RNA-binding (RRM/RBD/RNP motifs) family protein... 99 8e-19
ref|NP_001190207.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 99 8e-19
ref|XP_007027070.1| RNA-binding family protein [Theobroma cacao]... 97 2e-18
emb|CBI31707.3| unnamed protein product [Vitis vinifera] 97 3e-18
ref|XP_002316299.1| hypothetical protein POPTR_0010s21510g [Popu... 94 2e-17
ref|XP_007220341.1| hypothetical protein PRUPE_ppa014850mg [Prun... 93 4e-17
ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [A... 92 6e-17
ref|XP_006363386.1| PREDICTED: THO complex subunit 4-like [Solan... 92 7e-17
ref|XP_006480779.1| PREDICTED: THO complex subunit 4-like isofor... 92 1e-16
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 91 1e-16
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 91 1e-16
ref|XP_003579071.1| PREDICTED: RNA and export factor-binding pro... 91 2e-16
ref|XP_002299886.2| hypothetical protein POPTR_0001s24350g, part... 90 3e-16
ref|NP_974965.1| RNA recognition motif-containing protein [Arabi... 90 3e-16
ref|XP_007009396.1| RNA-binding family protein, putative isoform... 90 4e-16
ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solan... 90 4e-16
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro... 90 4e-16
>ref|XP_006288186.1| hypothetical protein CARUB_v10001422mg, partial [Capsella rubella]
gi|482556892|gb|EOA21084.1| hypothetical protein
CARUB_v10001422mg, partial [Capsella rubella]
Length = 329
Score = 103 bits (256), Expect = 3e-20
Identities = 65/145 (44%), Positives = 72/145 (49%), Gaps = 18/145 (12%)
Frame = +1
Query: 82 KMSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXX--FANHVPIRNA 255
KMS GLDMSLDD+I N G FAN V R A
Sbjct: 41 KMSGGLDMSLDDIIKSNRKPTGSRGRGGVGGNSTGGRGGFGGSGSGPSRRFANRVGNRTA 100
Query: 256 PYLTHPPAQASGLMLQPQMI----------------MAGGSVAESGTKLYVSNLDYGVSN 387
PY QA M Q + + GGS E+GTKLY+SNLDYGVSN
Sbjct: 101 PYSRPVQLQAQDAMWQNDVFATDASVAAAFGHQPAAVVGGSSIETGTKLYISNLDYGVSN 160
Query: 388 EDIKVLFSEVGELERYSIHYDRSGR 462
EDIK LFSEVG+L+RY IHYDRSGR
Sbjct: 161 EDIKELFSEVGDLKRYGIHYDRSGR 185
>ref|XP_002873059.1| hypothetical protein ARALYDRAFT_487031 [Arabidopsis lyrata subsp.
lyrata] gi|297318896|gb|EFH49318.1| hypothetical protein
ARALYDRAFT_487031 [Arabidopsis lyrata subsp. lyrata]
Length = 290
Score = 102 bits (253), Expect = 7e-20
Identities = 64/145 (44%), Positives = 72/145 (49%), Gaps = 19/145 (13%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXX--FANHVPIRNAP 258
MS GLDMSLDD+I N G FAN V R AP
Sbjct: 1 MSGGLDMSLDDIIKSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVGARTAP 60
Query: 259 YLTHPPAQASGLMLQPQM-----------------IMAGGSVAESGTKLYVSNLDYGVSN 387
Y QA M Q + ++ GGS E+GTKLY+SNLDYGVSN
Sbjct: 61 YSRPIQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGVSN 120
Query: 388 EDIKVLFSEVGELERYSIHYDRSGR 462
EDIK LFSEVG+L+RY IHYDRSGR
Sbjct: 121 EDIKELFSEVGDLKRYGIHYDRSGR 145
>ref|XP_006398711.1| hypothetical protein EUTSA_v10014286mg [Eutrema salsugineum]
gi|557099801|gb|ESQ40164.1| hypothetical protein
EUTSA_v10014286mg [Eutrema salsugineum]
Length = 287
Score = 98.6 bits (244), Expect = 8e-19
Identities = 63/143 (44%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXX--FANHVPIRNAP 258
M+ GLDMSLDD+I N G FAN V R AP
Sbjct: 1 MAGGLDMSLDDIIKSNRRPAGSRGRGVGGSSSGGRGFGGSGPGSGPSRRFANRVGNRAAP 60
Query: 259 YLTHPPAQASGLMLQPQMIMA---------------GGSVAESGTKLYVSNLDYGVSNED 393
Y QA M Q + GGS E+GTKLY+SNLDYGVSNED
Sbjct: 61 YSRPVQQQAQDAMWQNDVFATDASVAAAFGHQSAGIGGSSIETGTKLYISNLDYGVSNED 120
Query: 394 IKVLFSEVGELERYSIHYDRSGR 462
IK LFSEVG+L+RY IHYDRSGR
Sbjct: 121 IKELFSEVGDLKRYGIHYDRSGR 143
>ref|NP_195873.2| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|75329741|sp|Q8L719.1|THO4B_ARATH RecName:
Full=THO complex subunit 4B; AltName: Full=ALYREF
homolog 2; Short=AtALY2 gi|22655123|gb|AAM98152.1|
putative protein [Arabidopsis thaliana]
gi|30023796|gb|AAP13431.1| At5g02530 [Arabidopsis
thaliana] gi|332003102|gb|AED90485.1| RNA-binding
(RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 292
Score = 98.6 bits (244), Expect = 8e-19
Identities = 65/147 (44%), Positives = 74/147 (50%), Gaps = 21/147 (14%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXX--FANHVPIRNAP 258
MS GLDMSLDD+I N G FAN V R AP
Sbjct: 1 MSGGLDMSLDDIIKSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVGARTAP 60
Query: 259 YLTHP--PAQASGLMLQPQM-----------------IMAGGSVAESGTKLYVSNLDYGV 381
Y + P QA M Q + ++ GGS E+GTKLY+SNLDYGV
Sbjct: 61 Y-SRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGV 119
Query: 382 SNEDIKVLFSEVGELERYSIHYDRSGR 462
SNEDIK LFSEVG+L+RY IHYDRSGR
Sbjct: 120 SNEDIKELFSEVGDLKRYGIHYDRSGR 146
>ref|NP_001190207.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|7413642|emb|CAB85990.1| putative protein
[Arabidopsis thaliana] gi|332003103|gb|AED90486.1|
RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 290
Score = 98.6 bits (244), Expect = 8e-19
Identities = 65/147 (44%), Positives = 74/147 (50%), Gaps = 21/147 (14%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXX--FANHVPIRNAP 258
MS GLDMSLDD+I N G FAN V R AP
Sbjct: 1 MSGGLDMSLDDIIKSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVGARTAP 60
Query: 259 YLTHP--PAQASGLMLQPQM-----------------IMAGGSVAESGTKLYVSNLDYGV 381
Y + P QA M Q + ++ GGS E+GTKLY+SNLDYGV
Sbjct: 61 Y-SRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGV 119
Query: 382 SNEDIKVLFSEVGELERYSIHYDRSGR 462
SNEDIK LFSEVG+L+RY IHYDRSGR
Sbjct: 120 SNEDIKELFSEVGDLKRYGIHYDRSGR 146
>ref|XP_007027070.1| RNA-binding family protein [Theobroma cacao]
gi|508715675|gb|EOY07572.1| RNA-binding family protein
[Theobroma cacao]
Length = 240
Score = 97.1 bits (240), Expect = 2e-18
Identities = 63/136 (46%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
M++ LDMSLDDLI K+N GLT F N R APY
Sbjct: 1 MTNPLDMSLDDLI-KSNRKSGLTRTRPPLNSGNGPSRR---------FPNRAANRTAPY- 49
Query: 265 THPPAQASGLMLQPQMIMAGG----------SVAESGTKLYVSNLDYGVSNEDIKVLFSE 414
P QA Q M + G S E+GTKLY+SNLDYGVSNEDIK LFSE
Sbjct: 50 -SKPVQAPDTTWQHDMFVDDGAGFPSAAGRASSIETGTKLYISNLDYGVSNEDIKELFSE 108
Query: 415 VGELERYSIHYDRSGR 462
VG+++RYS+HYDRSGR
Sbjct: 109 VGDMKRYSVHYDRSGR 124
>emb|CBI31707.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 96.7 bits (239), Expect = 3e-18
Identities = 54/125 (43%), Positives = 69/125 (55%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
M LDMSLD++I S G++SN F N +R PY
Sbjct: 1 MPDPLDMSLDEIIRNKKKSAGVSSNVRGIGSGPGPGPARR-------FGNRELLRTTPYS 53
Query: 265 THPPAQASGLMLQPQMIMAGGSVAESGTKLYVSNLDYGVSNEDIKVLFSEVGELERYSIH 444
P Q + ++ G S E+GTKLY+SNL+YGVSN+DIK LFSEVGEL++YSIH
Sbjct: 54 VAPVFQVLEAAWKQEVFTGGVSTMETGTKLYISNLEYGVSNDDIKELFSEVGELKQYSIH 113
Query: 445 YDRSG 459
YD+SG
Sbjct: 114 YDKSG 118
>ref|XP_002316299.1| hypothetical protein POPTR_0010s21510g [Populus trichocarpa]
gi|222865339|gb|EEF02470.1| hypothetical protein
POPTR_0010s21510g [Populus trichocarpa]
Length = 250
Score = 94.4 bits (233), Expect = 2e-17
Identities = 62/127 (48%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
MSS LDMSLDDLI K + G S+ F P R PY
Sbjct: 1 MSSLLDMSLDDLIRKGKENGGRDSDFRGSGRGAGSGSVLGPGPDRLVFRRD-PTRPKPYS 59
Query: 265 THPPAQASGLMLQPQMIMAG-GSVAESGTKLYVSNLDYGVSNEDIKVLFSEVGELERYSI 441
P Q + +P M+ A GS E+ KLY+SNLDYGVSNEDIKVLFSEVGEL RYS+
Sbjct: 60 VRP-VQVMQVQQEPLMLAASEGSNGEA--KLYISNLDYGVSNEDIKVLFSEVGELLRYSL 116
Query: 442 HYDRSGR 462
HYD SGR
Sbjct: 117 HYDMSGR 123
>ref|XP_007220341.1| hypothetical protein PRUPE_ppa014850mg [Prunus persica]
gi|462416803|gb|EMJ21540.1| hypothetical protein
PRUPE_ppa014850mg [Prunus persica]
Length = 259
Score = 92.8 bits (229), Expect = 4e-17
Identities = 51/126 (40%), Positives = 68/126 (53%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
M GLDMSLD+LI K G N +R APY
Sbjct: 1 MPRGLDMSLDELIAKRKKPGGYHG---YFRGRGRGRGRGYGPGPTRRLMNRNTVRTAPYS 57
Query: 265 THPPAQASGLMLQPQMIMAGGSVAESGTKLYVSNLDYGVSNEDIKVLFSEVGELERYSIH 444
P Q ++ +M ++GG+ E GTKLY+SNLDY VSN DI++LFSE+G ++R+++H
Sbjct: 58 AQPIMQVVRTTVEQEMEVSGGTDTEEGTKLYLSNLDYDVSNSDIELLFSEIGHVKRHTVH 117
Query: 445 YDRSGR 462
YDRSGR
Sbjct: 118 YDRSGR 123
>ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
gi|548848813|gb|ERN07718.1| hypothetical protein
AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 92.4 bits (228), Expect = 6e-17
Identities = 63/137 (45%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
MSS LDMSLDDLI N S G N R APY
Sbjct: 1 MSSALDMSLDDLIKNNKKSGG-----GGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYS 55
Query: 265 THPPAQAS-------GLMLQPQ----MIMAGGSVAESGTKLYVSNLDYGVSNEDIKVLFS 411
QA+ L P + A S E+GTKLY+SNLDYGVSNEDIK LFS
Sbjct: 56 MGKAFQAAPETTWQHDLFADPVGPYGVQAARPSAIETGTKLYISNLDYGVSNEDIKELFS 115
Query: 412 EVGELERYSIHYDRSGR 462
EVG+L+RYSIHYDRSGR
Sbjct: 116 EVGDLKRYSIHYDRSGR 132
>ref|XP_006363386.1| PREDICTED: THO complex subunit 4-like [Solanum tuberosum]
Length = 254
Score = 92.0 bits (227), Expect = 7e-17
Identities = 59/132 (44%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Frame = +1
Query: 91 SGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYLTH 270
+ LDM+LDDLI KN T G F N R APY T
Sbjct: 4 AALDMTLDDLIKKNKTGTG-----GKPRGRGCGAASTSSAGPSRRFPNRSANRAAPYSTA 58
Query: 271 PPAQAS---GLMLQPQMI---MAGG--SVAESGTKLYVSNLDYGVSNEDIKVLFSEVGEL 426
+AS + Q + AGG S E+GTKLY+SNLDYGVS EDIK LFSE+G+L
Sbjct: 59 KAPEASWNHDMFAADQAVAFGQAGGRASSIETGTKLYISNLDYGVSKEDIKELFSEIGDL 118
Query: 427 ERYSIHYDRSGR 462
+RY++HYDRSGR
Sbjct: 119 KRYAVHYDRSGR 130
>ref|XP_006480779.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 287
Score = 91.7 bits (226), Expect = 1e-16
Identities = 64/147 (43%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Frame = +1
Query: 46 SEALHTFSTCSPKMSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXX 225
S LH+ S +M+S LDMSLDD+I N S
Sbjct: 19 SRNLHSPFRVSSRMTSALDMSLDDIIKSNKRSSS--------RWRGGGGRGSGLGPARHT 70
Query: 226 FANHVPIRNAPYLTHPPAQASGLMLQPQMIMAGGSVA--------ESGTKLYVSNLDYGV 381
F V R APY P QA MI G A ESGTKLY+SNL+YGV
Sbjct: 71 FKRSVN-RTAPY--SKPVQAPQATWPQNMIFNGAVAAAAARSSSIESGTKLYISNLEYGV 127
Query: 382 SNEDIKVLFSEVGELERYSIHYDRSGR 462
SNEDIK LFSEVGEL+R S+H+DRSGR
Sbjct: 128 SNEDIKELFSEVGELKRCSVHFDRSGR 154
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 91.3 bits (225), Expect = 1e-16
Identities = 61/134 (45%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
MSS LDMSLDD+I KNN G + N R APY
Sbjct: 1 MSSALDMSLDDII-KNNKKSGSGN--------FRGRGRGSGPGPARRIPNRGANRVAPYT 51
Query: 265 THPPAQ--------ASGLMLQPQMIMAGGSVAESGTKLYVSNLDYGVSNEDIKVLFSEVG 420
T + A + P S E+GTKLY+SNLDYGVSNEDIK LFSEVG
Sbjct: 52 TAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVG 111
Query: 421 ELERYSIHYDRSGR 462
+L+RYSIHYDRSGR
Sbjct: 112 DLKRYSIHYDRSGR 125
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 91.3 bits (225), Expect = 1e-16
Identities = 61/134 (45%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
MSS LDMSLDD+I KNN G + N R APY
Sbjct: 1 MSSALDMSLDDII-KNNKKSGSGN--------FRGRGRGSGPGPARRIPNRGANRVAPYT 51
Query: 265 THPPAQ--------ASGLMLQPQMIMAGGSVAESGTKLYVSNLDYGVSNEDIKVLFSEVG 420
T + A + P S E+GTKLY+SNLDYGVSNEDIK LFSEVG
Sbjct: 52 TAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVG 111
Query: 421 ELERYSIHYDRSGR 462
+L+RYSIHYDRSGR
Sbjct: 112 DLKRYSIHYDRSGR 125
>ref|XP_003579071.1| PREDICTED: RNA and export factor-binding protein 2-like
[Brachypodium distachyon]
Length = 259
Score = 90.9 bits (224), Expect = 2e-16
Identities = 59/136 (43%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPY- 261
M+ LDMSLDDLI+KN +S + + F H APY
Sbjct: 1 MADSLDMSLDDLISKNKSSSSQSQSRRGRRNQASPSATGGPAPTGRRF--HARAATAPYH 58
Query: 262 ---LTH---PPAQA---SGLMLQPQMIMAGGSVAESGTKLYVSNLDYGVSNEDIKVLFSE 414
H PPA A + P + S E+GTKLY+SNLDY VSNEDIK LFSE
Sbjct: 59 QLAFHHNQVPPAYAYAAAQAQAMPMLAPPPPSGVETGTKLYISNLDYNVSNEDIKELFSE 118
Query: 415 VGELERYSIHYDRSGR 462
VG+L+RYSI+YD+SGR
Sbjct: 119 VGDLKRYSINYDKSGR 134
>ref|XP_002299886.2| hypothetical protein POPTR_0001s24350g, partial [Populus
trichocarpa] gi|550348078|gb|EEE84691.2| hypothetical
protein POPTR_0001s24350g, partial [Populus trichocarpa]
Length = 180
Score = 90.1 bits (222), Expect = 3e-16
Identities = 61/128 (47%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
MSS LDMSLDD+I KN+ G + F N R+APY
Sbjct: 1 MSSALDMSLDDII-KNSKKPGSAN------FRGRGRGHPSGAGPARRFPNRAANRSAPYT 53
Query: 265 THPPAQASGLMLQPQMI--MAGGSVAESGTKLYVSNLDYGVSNEDIKVLFSEVGELERYS 438
A+A Q M +G + + G KLYVSNLDYGVSNEDIK LF EVGEL+RYS
Sbjct: 54 A---AKAPESTWQHDMFRDQSGRTSSLEGAKLYVSNLDYGVSNEDIKELFLEVGELKRYS 110
Query: 439 IHYDRSGR 462
IHYDRSGR
Sbjct: 111 IHYDRSGR 118
>ref|NP_974965.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009873|gb|AED97256.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 242
Score = 90.1 bits (222), Expect = 3e-16
Identities = 58/130 (44%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
MS+GLDMSLDD+I KN S G N R+APY
Sbjct: 1 MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSGPGPTRRNNP------NRKSTRSAPYQ 54
Query: 265 THPPAQASGLMLQPQMI--MAGGSVA--ESGTKLYVSNLDYGVSNEDIKVLFSEVGELER 432
+ P + M + +G S A E+GTKLY+SNLDYGV NEDIK LF+EVGEL+R
Sbjct: 55 SAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKR 114
Query: 433 YSIHYDRSGR 462
Y++H+DRSGR
Sbjct: 115 YTVHFDRSGR 124
>ref|XP_007009396.1| RNA-binding family protein, putative isoform 2 [Theobroma cacao]
gi|508726309|gb|EOY18206.1| RNA-binding family protein,
putative isoform 2 [Theobroma cacao]
Length = 242
Score = 89.7 bits (221), Expect = 4e-16
Identities = 55/126 (43%), Positives = 70/126 (55%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
MS LDMSLD++I S+G + H P+R PY
Sbjct: 1 MSGSLDMSLDEIIRNRGRSEGHFRDSRRKPHGSGPGPGPDRRGP-----THDPLRTNPYP 55
Query: 265 THPPAQASGLMLQPQMIMAGGSVAESGTKLYVSNLDYGVSNEDIKVLFSEVGELERYSIH 444
P A+ Q++ +GGS E+ KL +SNLDYGVSNED+KVLFSEVG+L+RYSI+
Sbjct: 56 VRPVPTAAAW--HGQLVSSGGSDMEA--KLCISNLDYGVSNEDVKVLFSEVGDLKRYSIN 111
Query: 445 YDRSGR 462
YDRSGR
Sbjct: 112 YDRSGR 117
>ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solanum lycopersicum]
Length = 251
Score = 89.7 bits (221), Expect = 4e-16
Identities = 58/132 (43%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Frame = +1
Query: 91 SGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYLTH 270
+ LDM+LDDLI KN T G N R APY
Sbjct: 4 AALDMTLDDLIKKNKTGTG-----GKPRGRGRGAASTSSAGPSRRVPNRSANRAAPYSIA 58
Query: 271 PPAQASGL--MLQPQMIMAGG------SVAESGTKLYVSNLDYGVSNEDIKVLFSEVGEL 426
QAS M + +A G S E+GTKLY+SNLDYGVSNEDIK LFSE+G+L
Sbjct: 59 KAPQASWNHDMFEADQAVAFGQAGGRASSIETGTKLYISNLDYGVSNEDIKELFSEIGDL 118
Query: 427 ERYSIHYDRSGR 462
+RY++HYDRSGR
Sbjct: 119 KRYAVHYDRSGR 130
>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 89.7 bits (221), Expect = 4e-16
Identities = 57/126 (45%), Positives = 64/126 (50%)
Frame = +1
Query: 85 MSSGLDMSLDDLINKNNTSDGLTSNXXXXXXXXXXXXXXXXXXXXXXFANHVPIRNAPYL 264
MS+ LDMSLDDLI KNN G N + AP
Sbjct: 1 MSNALDMSLDDLI-KNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKAPET 59
Query: 265 THPPAQASGLMLQPQMIMAGGSVAESGTKLYVSNLDYGVSNEDIKVLFSEVGELERYSIH 444
T + S E+GTKLY+SNLDYGVSNEDIK LFSEVG+L+RYSIH
Sbjct: 60 TWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 445 YDRSGR 462
YDRSGR
Sbjct: 120 YDRSGR 125