BLASTX nr result

ID: Paeonia24_contig00013468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00013468
         (404 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]    87   2e-15
ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containi...    85   9e-15
ref|XP_006470579.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_006446275.1| hypothetical protein CICLE_v10017597mg [Citr...    66   4e-09
ref|XP_007015298.1| Tetratricopeptide repeat (TPR)-like superfam...    64   2e-08
ref|XP_004293147.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|NP_195731.1| pentatricopeptide repeat-containing protein [Ar...    61   1e-07
ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
gb|EXB92320.1| hypothetical protein L484_004640 [Morus notabilis]      59   5e-07
gb|EXB44143.1| hypothetical protein L484_005295 [Morus notabilis]      59   5e-07
ref|XP_002870941.1| pentatricopeptide repeat-containing protein ...    59   7e-07
ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    59   9e-07
ref|XP_006287148.1| hypothetical protein CARUB_v10000318mg [Caps...    56   4e-06
ref|XP_006398652.1| hypothetical protein EUTSA_v10012778mg [Eutr...    56   6e-06

>emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 56/120 (46%), Positives = 66/120 (55%), Gaps = 18/120 (15%)
 Frame = +1

Query: 97  QMSTQLLFSQTPALRTITHTRCSLHTHIHTQPSHSLHSLPNPKP---------------- 228
           QMSTQ  F Q   LRT+T    SLHT         L S PNP                  
Sbjct: 104 QMSTQRSFFQKSTLRTLTRKTSSLHTKT------LLSSAPNPNSSYGIPALQTLETSTTL 157

Query: 229 NPNYIS--NTSTSLSDSFFVEKILVNLKQGNLNSSHSYLHRLDPSTVVEVLYRCRKDLQL 402
           NP+ +   N STSLSDSF  EK+L+NLKQG LNS  + L RLD   VV+VLY+CR++LQL
Sbjct: 158 NPSSVEDPNQSTSLSDSFLTEKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQL 217


>ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 55/119 (46%), Positives = 65/119 (54%), Gaps = 18/119 (15%)
 Frame = +1

Query: 100 MSTQLLFSQTPALRTITHTRCSLHTHIHTQPSHSLHSLPNPKP----------------N 231
           MSTQ  F Q   LRT+T    SLHT         L S PNP                  N
Sbjct: 1   MSTQRSFFQKSTLRTLTRKTSSLHTKT------LLSSAPNPNSSYGIPALQTLETSTTLN 54

Query: 232 PNYIS--NTSTSLSDSFFVEKILVNLKQGNLNSSHSYLHRLDPSTVVEVLYRCRKDLQL 402
           P+ +   N STSLSDSF  EK+L+NLKQG LNS  + L RLD   VV+VLY+CR++LQL
Sbjct: 55  PSSVEDPNQSTSLSDSFLTEKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQL 113


>ref|XP_006470579.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Citrus sinensis]
          Length = 752

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 8/83 (9%)
 Frame = +1

Query: 178 IHTQPSHSLHSLPNPKPNPNYIS--------NTSTSLSDSFFVEKILVNLKQGNLNSSHS 333
           + ++ + SLH+L NP       S        ++S S+SDS  VEKIL+NLKQGN+NS  S
Sbjct: 37  VKSRAAASLHTLINPNSGSTEASLNSNQEQVSSSGSVSDSLLVEKILLNLKQGNVNSLRS 96

Query: 334 YLHRLDPSTVVEVLYRCRKDLQL 402
           Y  RL+   +VEVLYR R +LQ+
Sbjct: 97  YQFRLNSVIIVEVLYRLRDNLQV 119


>ref|XP_006446275.1| hypothetical protein CICLE_v10017597mg [Citrus clementina]
           gi|557548886|gb|ESR59515.1| hypothetical protein
           CICLE_v10017597mg [Citrus clementina]
          Length = 732

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 8/83 (9%)
 Frame = +1

Query: 178 IHTQPSHSLHSLPNPKPNPNYIS--------NTSTSLSDSFFVEKILVNLKQGNLNSSHS 333
           + ++ + SLH+L NP       S        ++S S+SDS  VEKIL+NLKQGN+NS  S
Sbjct: 17  VKSRAAASLHTLINPNSGSTEASLNSNQEQVSSSGSVSDSLLVEKILLNLKQGNVNSLRS 76

Query: 334 YLHRLDPSTVVEVLYRCRKDLQL 402
           Y  RL+   +VEVLYR R +LQ+
Sbjct: 77  YQFRLNSVIIVEVLYRLRDNLQV 99


>ref|XP_007015298.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|590584881|ref|XP_007015299.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
           gi|590584884|ref|XP_007015300.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508785661|gb|EOY32917.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508785662|gb|EOY32918.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508785663|gb|EOY32919.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 727

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/71 (50%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
 Frame = +1

Query: 202 LHSLPNPKPNPNY----ISNTSTSLSDSFFVEKILVNLKQGNLNSSHSYLHRLDPSTVVE 369
           L SLPN     N+    +   S    DSF VEKIL +LKQGN+NS  +Y  RL+P  V E
Sbjct: 24  LSSLPNQNHYHNFDVRTLQTPSNGAPDSFMVEKILFSLKQGNMNSLRNYRFRLNPLIVAE 83

Query: 370 VLYRCRKDLQL 402
           VL  CR DLQL
Sbjct: 84  VLSHCRDDLQL 94


>ref|XP_004293147.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Fragaria vesca subsp. vesca]
          Length = 729

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +1

Query: 136 LRTITHTRCSLHTHIHTQPSHSLHSLPNPKPN-PNYISNTSTSLSDSFFVEKILVNLKQG 312
           +RT+T          H+   HS+ S P+   +  N ++  ++SLS S  VEK+L+ LKQG
Sbjct: 10  VRTLTTFTQQHPVLFHSHRPHSISSSPSSNHSLENGVTLEASSLSGSLLVEKLLLGLKQG 69

Query: 313 NLNSSHSYLHRLDPSTVVEVLYRCRKDL 396
           NLNS  + L +L+P  VVE+++RCR +L
Sbjct: 70  NLNSLRNSLFQLNPLVVVELVHRCRDNL 97


>ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g01110 gi|6759434|emb|CAB69839.1| putative protein
           [Arabidopsis thaliana] gi|28973740|gb|AAO64186.1|
           unknown protein [Arabidopsis thaliana]
           gi|110736884|dbj|BAF00399.1| hypothetical protein
           [Arabidopsis thaliana] gi|332002917|gb|AED90300.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 729

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/53 (62%), Positives = 40/53 (75%)
 Frame = +1

Query: 244 SNTSTSLSDSFFVEKILVNLKQGNLNSSHSYLHRLDPSTVVEVLYRCRKDLQL 402
           S+ S S+SDSF VEKI  +LKQGN N+  ++L RL+P  VVEVLYRCR DL L
Sbjct: 43  SSASFSVSDSFLVEKICFSLKQGN-NNVRNHLIRLNPLAVVEVLYRCRNDLTL 94


>ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = +1

Query: 121 SQTPALRTITHTRCSLHTHIHTQPSHSLHSLP-NPKPNPNYISNTSTSLSDSFFVEKILV 297
           S TP L  I ++  +LHT I++  + +L  L  +  P P +  ++S S SDSF +EKIL 
Sbjct: 24  SSTPLLPAIFNS-FTLHT-IYSPSNTALRFLQTHSAPAPPHPVSSSLSPSDSFLLEKILF 81

Query: 298 NLKQGNLNSSHSYLHRLDPSTVVEVLYRCRKDLQL 402
            LKQ N++     L RL PS +++VL+RCR DL L
Sbjct: 82  TLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHL 116


>gb|EXB92320.1| hypothetical protein L484_004640 [Morus notabilis]
          Length = 539

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/57 (56%), Positives = 42/57 (73%)
 Frame = +1

Query: 232 PNYISNTSTSLSDSFFVEKILVNLKQGNLNSSHSYLHRLDPSTVVEVLYRCRKDLQL 402
           PN    +S S+SDSF  EKIL+ LKQGNL S H+Y++R++P  VVEVL  C ++LQL
Sbjct: 119 PNKEPVSSDSISDSFLSEKILLGLKQGNLISVHNYIYRINPLVVVEVL-SCCENLQL 174


>gb|EXB44143.1| hypothetical protein L484_005295 [Morus notabilis]
          Length = 224

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/57 (56%), Positives = 42/57 (73%)
 Frame = +1

Query: 232 PNYISNTSTSLSDSFFVEKILVNLKQGNLNSSHSYLHRLDPSTVVEVLYRCRKDLQL 402
           PN    +S S+SDSF  EKIL+ LKQGNL S H+Y++R++P  VVEVL  C ++LQL
Sbjct: 78  PNKEPVSSDSISDSFLSEKILLGLKQGNLISVHNYIYRINPLVVVEVL-SCCENLQL 133


>ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316778|gb|EFH47200.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 719

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = +1

Query: 244 SNTSTSLSDSFFVEKILVNLKQGNLNSSHSYLHRLDPSTVVEVLYRCRKDLQL 402
           S+ S S SDSF VEKI  +LKQGN N   ++L RL+P  VVEVLYRCR DL L
Sbjct: 33  SSASDSDSDSFLVEKICFSLKQGNSNV-RNHLIRLNPLAVVEVLYRCRNDLSL 84


>ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = +1

Query: 121 SQTPALRTITHTRCSLHTHIHTQPSHSLHSLP-NPKPNPNYISNTSTSLSDSFFVEKILV 297
           S TP L TI ++  +LHT I++  + +L  L  +  P P +  ++S S SDS  +EKIL 
Sbjct: 24  SSTPLLPTIFNS-FTLHT-IYSPSNTTLRFLQTHSAPAPPHPVSSSLSPSDSSLLEKILF 81

Query: 298 NLKQGNLNSSHSYLHRLDPSTVVEVLYRCRKDLQL 402
            LKQ N++     L RL PS +++VL+RCR DL L
Sbjct: 82  TLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHL 116


>ref|XP_006287148.1| hypothetical protein CARUB_v10000318mg [Capsella rubella]
           gi|482555854|gb|EOA20046.1| hypothetical protein
           CARUB_v10000318mg [Capsella rubella]
          Length = 729

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
 Frame = +1

Query: 154 TRCSLHTHIHTQPSHSLHSLPNPKPNPNYISNTSTSLSDSFFVEKILVNLKQG--NLNSS 327
           TRC     + T  S SL   P         S++S+S SDS  VE+I  +LKQG  N+ S 
Sbjct: 19  TRCKPLKTLTTSSSPSLEFEP---------SSSSSSSSDSDSVERICFSLKQGSNNVASM 69

Query: 328 HSYLHRLDPSTVVEVLYRCRKDLQL 402
            ++L RL+P  VVEVLYRCR DL L
Sbjct: 70  RNHLIRLNPLAVVEVLYRCRNDLCL 94


>ref|XP_006398652.1| hypothetical protein EUTSA_v10012778mg [Eutrema salsugineum]
           gi|557099742|gb|ESQ40105.1| hypothetical protein
           EUTSA_v10012778mg [Eutrema salsugineum]
          Length = 736

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = +1

Query: 160 CSLHTHIHTQPSHSLHSLPNPKPNPNYISNTS-TSLSDSFFVEKILVNLKQGNLN--SSH 330
           C+    + T  + S  S   P+  P+  S +   S SDSF VEKI  +LKQGN N  S  
Sbjct: 18  CNRFKPLKTLTTSSSSSSLAPELEPSSSSGSGLVSDSDSFLVEKICFSLKQGNCNAGSLR 77

Query: 331 SYLHRLDPSTVVEVLYRCRKDLQL 402
           ++L RL+P  VVEVLYR R DL L
Sbjct: 78  NHLIRLNPLAVVEVLYRFRNDLSL 101


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