BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00013174
         (632 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHE41669.1| RNA polymerase beta' subunit (chloroplast) [Paeon...   420   e-115
gb|ABQ15073.1| RNA polymerase beta' subunit [Paeonia brownii]         416   e-114
gb|AHE41658.1| RNA polymerase beta' subunit, partial (chloroplas...   396   e-108
gb|ABQ15060.1| RNA polymerase beta' subunit [Cercidiphyllum japo...   396   e-108
gb|AHE41653.1| RNA polymerase beta' subunit (chloroplast) [Hamam...   395   e-108
gb|ABQ15067.1| RNA polymerase beta' subunit [Hamamelis japonica]      395   e-108
gb|ABD93804.1| RNA polymerase beta chain [Hamamelis mollis]           395   e-108
gb|AEM44881.1| RNA polymerase beta chain [Petalonyx parryi]           395   e-108
gb|ABV65753.1| RNA polymerase beta'' subunit (chloroplast) [Liqu...   392   e-107
gb|ABQ15071.1| RNA polymerase beta' subunit [Liquidambar styraci...   392   e-107
gb|AHE41660.1| RNA polymerase beta' subunit, partial (chloroplas...   392   e-107
gb|ABQ15064.1| RNA polymerase beta' subunit [Daphniphyllum sp. 2...   392   e-107
gb|ABQ15062.1| RNA polymerase beta' subunit [Corylopsis pauciflora]   391   e-106
gb|AHE41665.1| RNA polymerase beta' subunit, partial (chloroplas...   390   e-106
gb|AHE41663.1| RNA polymerase beta' subunit, partial (chloroplas...   390   e-106
gb|AHE41657.1| RNA polymerase beta' subunit (chloroplast) [Itea ...   390   e-106
gb|AHE41656.1| RNA polymerase beta' subunit (chloroplast) [Daphn...   390   e-106
ref|YP_008963681.1| RNA polymerase beta' subunit (chloroplast) [...   390   e-106
gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplas...   389   e-106
gb|AEM44882.1| RNA polymerase beta chain [Hydrangea sp. DES-2011]     389   e-106

>gb|AHE41669.1| RNA polymerase beta' subunit (chloroplast) [Paeonia obovata]
          Length = 1392

 Score =  420 bits (1079), Expect = e-115
 Identities = 210/210 (100%), Positives = 210/210 (100%)
 Frame = -1

Query: 632  SSSNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDS 453
            SSSNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDS
Sbjct: 1043 SSSNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDS 1102

Query: 452  VVIRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSI 273
            VVIRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSI
Sbjct: 1103 VVIRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSI 1162

Query: 272  DSISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN 93
            DSISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN
Sbjct: 1163 DSISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN 1222

Query: 92   RHIEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            RHIEIIVRQITSKVLVSEEGMSNVFSPGEL
Sbjct: 1223 RHIEIIVRQITSKVLVSEEGMSNVFSPGEL 1252


>gb|ABQ15073.1| RNA polymerase beta' subunit [Paeonia brownii]
          Length = 862

 Score =  416 bits (1070), Expect = e-114
 Identities = 208/210 (99%), Positives = 210/210 (100%)
 Frame = -1

Query: 632  SSSNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDS 453
            SSSNIILNPFNLNWYFF+HNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDS
Sbjct: 588  SSSNIILNPFNLNWYFFYHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDS 647

Query: 452  VVIRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSI 273
            VVIRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSI
Sbjct: 648  VVIRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSI 707

Query: 272  DSISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN 93
            DSISMNLEKRVEDWNGRIT+ILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN
Sbjct: 708  DSISMNLEKRVEDWNGRITKILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN 767

Query: 92   RHIEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            RHIEIIVRQITSKVLVSEEGMSNVFSPGEL
Sbjct: 768  RHIEIIVRQITSKVLVSEEGMSNVFSPGEL 797


>gb|AHE41658.1| RNA polymerase beta' subunit, partial (chloroplast) [Cercidiphyllum
            japonicum]
          Length = 1372

 Score =  396 bits (1017), Expect = e-108
 Identities = 197/208 (94%), Positives = 202/208 (97%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILNPFNLNWYF HHN CEETSTIISLGQFICENVYIAK GP+LKSGQ+LIVQVDSVV
Sbjct: 1025 SNIILNPFNLNWYFLHHNSCEETSTIISLGQFICENVYIAKNGPHLKSGQVLIVQVDSVV 1084

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 1085 IRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 1144

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 1145 ISMNLEKRVEGWNARITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 1204

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 1205 IEIIVRQITSKVLVSEDGMSNVFSPGEL 1232


>gb|ABQ15060.1| RNA polymerase beta' subunit [Cercidiphyllum japonicum]
          Length = 798

 Score =  396 bits (1017), Expect = e-108
 Identities = 197/208 (94%), Positives = 202/208 (97%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILNPFNLNWYF HHN CEETSTIISLGQFICENVYIAK GP+LKSGQ+LIVQVDSVV
Sbjct: 589  SNIILNPFNLNWYFLHHNSCEETSTIISLGQFICENVYIAKNGPHLKSGQVLIVQVDSVV 648

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 649  IRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 708

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 709  ISMNLEKRVEGWNARITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 768

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 769  IEIIVRQITSKVLVSEDGMSNVFSPGEL 796


>gb|AHE41653.1| RNA polymerase beta' subunit (chloroplast) [Hamamelis mollis]
          Length = 1387

 Score =  395 bits (1016), Expect = e-108
 Identities = 198/210 (94%), Positives = 203/210 (96%)
 Frame = -1

Query: 632  SSSNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDS 453
            S SNIILNPFNLNWYF H NYCEETSTIISLGQFICENV IAK GP+LKSGQ+LIVQVDS
Sbjct: 1038 SCSNIILNPFNLNWYFLHPNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQVDS 1097

Query: 452  VVIRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSI 273
            VVIRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSI
Sbjct: 1098 VVIRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSI 1157

Query: 272  DSISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN 93
            DSISMNLEKRVE WNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN
Sbjct: 1158 DSISMNLEKRVEGWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN 1217

Query: 92   RHIEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            RHIEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 1218 RHIEIIVRQITSKVLVSEDGMSNVFSPGEL 1247


>gb|ABQ15067.1| RNA polymerase beta' subunit [Hamamelis japonica]
          Length = 860

 Score =  395 bits (1016), Expect = e-108
 Identities = 198/210 (94%), Positives = 203/210 (96%)
 Frame = -1

Query: 632  SSSNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDS 453
            S SNIILNPFNLNWYF H NYCEETSTIISLGQFICENV IAK GP+LKSGQ+LIVQVDS
Sbjct: 586  SCSNIILNPFNLNWYFLHPNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQVDS 645

Query: 452  VVIRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSI 273
            VVIRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSI
Sbjct: 646  VVIRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSI 705

Query: 272  DSISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN 93
            DSISMNLEKRVE WNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN
Sbjct: 706  DSISMNLEKRVEGWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN 765

Query: 92   RHIEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            RHIEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 766  RHIEIIVRQITSKVLVSEDGMSNVFSPGEL 795


>gb|ABD93804.1| RNA polymerase beta chain [Hamamelis mollis]
          Length = 863

 Score =  395 bits (1016), Expect = e-108
 Identities = 198/210 (94%), Positives = 203/210 (96%)
 Frame = -1

Query: 632  SSSNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDS 453
            S SNIILNPFNLNWYF H NYCEETSTIISLGQFICENV IAK GP+LKSGQ+LIVQVDS
Sbjct: 589  SCSNIILNPFNLNWYFLHPNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQVDS 648

Query: 452  VVIRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSI 273
            VVIRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSI
Sbjct: 649  VVIRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSI 708

Query: 272  DSISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN 93
            DSISMNLEKRVE WNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN
Sbjct: 709  DSISMNLEKRVEGWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHN 768

Query: 92   RHIEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            RHIEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 769  RHIEIIVRQITSKVLVSEDGMSNVFSPGEL 798


>gb|AEM44881.1| RNA polymerase beta chain [Petalonyx parryi]
          Length = 515

 Score =  395 bits (1014), Expect = e-108
 Identities = 196/208 (94%), Positives = 202/208 (97%)
 Frame = -1

Query: 626 SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
           SNIILNPFNLNWYF HHNYCEETSTIISLGQFICENV IAK GP+LKSGQ+LIVQ+DSVV
Sbjct: 288 SNIILNPFNLNWYFLHHNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQIDSVV 347

Query: 446 IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
           IRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 348 IRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 407

Query: 266 ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
           ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 408 ISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 467

Query: 86  IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
           IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 468 IEIIVRQITSKVLVSEDGMSNVFSPGEL 495


>gb|ABV65753.1| RNA polymerase beta'' subunit (chloroplast) [Liquidambar styraciflua]
          Length = 1390

 Score =  392 bits (1008), Expect = e-107
 Identities = 196/208 (94%), Positives = 201/208 (96%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILNPFNLNWYF HHNYCEETSTIISLGQFICENV IAK GP+LKSGQ+LIVQVDSVV
Sbjct: 1043 SNIILNPFNLNWYFLHHNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQVDSVV 1102

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLAT GATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 1103 IRSAKPYLATTGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 1162

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 1163 ISMNLEKRVEGWNDRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 1222

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 1223 IEIIVRQITSKVLVSEDGMSNVFSPGEL 1250


>gb|ABQ15071.1| RNA polymerase beta' subunit [Liquidambar styraciflua]
          Length = 830

 Score =  392 bits (1008), Expect = e-107
 Identities = 196/208 (94%), Positives = 201/208 (96%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILNPFNLNWYF HHNYCEETSTIISLGQFICENV IAK GP+LKSGQ+LIVQVDSVV
Sbjct: 576  SNIILNPFNLNWYFLHHNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQVDSVV 635

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLAT GATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 636  IRSAKPYLATTGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 695

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 696  ISMNLEKRVEGWNDRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 755

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 756  IEIIVRQITSKVLVSEDGMSNVFSPGEL 783


>gb|AHE41660.1| RNA polymerase beta' subunit, partial (chloroplast) [Exbucklandia
            populnea]
          Length = 1368

 Score =  392 bits (1007), Expect = e-107
 Identities = 196/208 (94%), Positives = 201/208 (96%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILN FNLNWYF HHNYCEETSTIISLGQFICENV IAK GP+LKSGQ+LIVQVDSVV
Sbjct: 1021 SNIILNSFNLNWYFLHHNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQVDSVV 1080

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 1081 IRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 1140

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 1141 ISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 1200

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 1201 IEIIVRQITSKVLVSEDGMSNVFSPGEL 1228


>gb|ABQ15064.1| RNA polymerase beta' subunit [Daphniphyllum sp. 205-82]
          Length = 793

 Score =  392 bits (1007), Expect = e-107
 Identities = 195/208 (93%), Positives = 201/208 (96%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILNPFNLNWYF HHNYCEETSTIISLGQFICENV IAKKGP+LKSGQ+LIV+VDSVV
Sbjct: 578  SNIILNPFNLNWYFLHHNYCEETSTIISLGQFICENVCIAKKGPHLKSGQVLIVRVDSVV 637

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLATPG  VHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 638  IRSAKPYLATPGTNVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 697

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 698  ISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 757

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 758  IEIIVRQITSKVLVSEDGMSNVFSPGEL 785


>gb|ABQ15062.1| RNA polymerase beta' subunit [Corylopsis pauciflora]
          Length = 821

 Score =  391 bits (1004), Expect = e-106
 Identities = 195/208 (93%), Positives = 201/208 (96%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILNPFNLNWYF H NYCEETSTIISLGQFICEN+ IAK GP+LKSGQ+LIVQVDSVV
Sbjct: 573  SNIILNPFNLNWYFLHPNYCEETSTIISLGQFICENICIAKNGPHLKSGQVLIVQVDSVV 632

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 633  IRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 692

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 693  ISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 752

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 753  IEIIVRQITSKVLVSEDGMSNVFSPGEL 780


>gb|AHE41665.1| RNA polymerase beta' subunit, partial (chloroplast) [Philadelphus
            coronarius]
          Length = 1368

 Score =  390 bits (1002), Expect = e-106
 Identities = 194/208 (93%), Positives = 201/208 (96%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILNPFNLNWYF  HNYCEETSTIISLGQFICENV IAK GP+LKSGQ+LIVQ+DSVV
Sbjct: 1021 SNIILNPFNLNWYFLDHNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQIDSVV 1080

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLATPGATVHGHYG+ILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 1081 IRSAKPYLATPGATVHGHYGQILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 1140

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 1141 ISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 1200

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 1201 IEIIVRQITSKVLVSEDGMSNVFSPGEL 1228


>gb|AHE41663.1| RNA polymerase beta' subunit, partial (chloroplast) [Mytilaria
            laosensis]
          Length = 1374

 Score =  390 bits (1002), Expect = e-106
 Identities = 193/208 (92%), Positives = 201/208 (96%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILNPFNLNWYF HHNYCE+TSTIISLGQFICEN+ IAK GP+LKSGQ+LIVQVDSVV
Sbjct: 1027 SNIILNPFNLNWYFLHHNYCEKTSTIISLGQFICENLCIAKNGPHLKSGQVLIVQVDSVV 1086

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 1087 IRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 1146

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAEL IVQSRISLVNKIQK+YRSQGVQIHNRH
Sbjct: 1147 ISMNLEKRVEGWNERITRILGIPWGFLIGAELAIVQSRISLVNKIQKIYRSQGVQIHNRH 1206

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 1207 IEIIVRQITSKVLVSEDGMSNVFSPGEL 1234


>gb|AHE41657.1| RNA polymerase beta' subunit (chloroplast) [Itea chinensis]
          Length = 1377

 Score =  390 bits (1002), Expect = e-106
 Identities = 194/207 (93%), Positives = 201/207 (97%)
 Frame = -1

Query: 623  NIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVVI 444
            NIILNPFNLNWYF HHNYCEET+TIISLGQFICEN+ IAKKGP+LKSGQ+LIVQVDSVVI
Sbjct: 1036 NIILNPFNLNWYFLHHNYCEETTTIISLGQFICENLCIAKKGPHLKSGQVLIVQVDSVVI 1095

Query: 443  RSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDSI 264
            RS K YLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDSI
Sbjct: 1096 RSAKTYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSI 1155

Query: 263  SMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHI 84
            SMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHI
Sbjct: 1156 SMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHI 1215

Query: 83   EIIVRQITSKVLVSEEGMSNVFSPGEL 3
            EIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 1216 EIIVRQITSKVLVSEDGMSNVFSPGEL 1242


>gb|AHE41656.1| RNA polymerase beta' subunit (chloroplast) [Daphniphyllum oldhamii]
          Length = 1392

 Score =  390 bits (1002), Expect = e-106
 Identities = 194/208 (93%), Positives = 200/208 (96%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILNPFNLNWYF HHNYCEETSTIISLGQFICENV IAK GP+LKSGQ+LIV+VDSVV
Sbjct: 1043 SNIILNPFNLNWYFLHHNYCEETSTIISLGQFICENVCIAKNGPHLKSGQVLIVRVDSVV 1102

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLATPG  VHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 1103 IRSAKPYLATPGTNVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 1162

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 1163 ISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 1222

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 1223 IEIIVRQITSKVLVSEDGMSNVFSPGEL 1250


>ref|YP_008963681.1| RNA polymerase beta' subunit (chloroplast) [Liquidambar formosana]
            gi|491650361|gb|AGL13421.1| RNA polymerase beta' subunit
            (chloroplast) [Liquidambar formosana]
          Length = 1390

 Score =  390 bits (1002), Expect = e-106
 Identities = 194/208 (93%), Positives = 200/208 (96%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILNPFNLNWYF HHNYCEETSTIISLGQF+CENV IAK GP+LK GQ+LIVQVDSVV
Sbjct: 1043 SNIILNPFNLNWYFLHHNYCEETSTIISLGQFVCENVCIAKNGPHLKPGQVLIVQVDSVV 1102

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLAT GATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 1103 IRSAKPYLATTGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 1162

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 1163 ISMNLEKRVEGWNDRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 1222

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 1223 IEIIVRQITSKVLVSEDGMSNVFSPGEL 1250


>gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplast) [Rhodoleia
            championii]
          Length = 1375

 Score =  389 bits (1000), Expect = e-106
 Identities = 195/208 (93%), Positives = 200/208 (96%)
 Frame = -1

Query: 626  SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
            SNIILN FNLNWYF HHNYCEETSTIISLGQFICENV IAK GP LKSGQ++IVQVDSVV
Sbjct: 1028 SNIILNSFNLNWYFLHHNYCEETSTIISLGQFICENVCIAKNGPNLKSGQVVIVQVDSVV 1087

Query: 446  IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
            IRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 1088 IRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 1147

Query: 266  ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
            ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 1148 ISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 1207

Query: 86   IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
            IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 1208 IEIIVRQITSKVLVSEDGMSNVFSPGEL 1235


>gb|AEM44882.1| RNA polymerase beta chain [Hydrangea sp. DES-2011]
          Length = 495

 Score =  389 bits (1000), Expect = e-106
 Identities = 194/208 (93%), Positives = 200/208 (96%)
 Frame = -1

Query: 626 SNIILNPFNLNWYFFHHNYCEETSTIISLGQFICENVYIAKKGPYLKSGQILIVQVDSVV 447
           SNIILNPFNLNWYF  HNYCEETSTIISLG FICENV IAK GP+LKSGQ+LIVQ+DSVV
Sbjct: 267 SNIILNPFNLNWYFLDHNYCEETSTIISLGHFICENVCIAKNGPHLKSGQVLIVQIDSVV 326

Query: 446 IRSTKPYLATPGATVHGHYGEILYKGDTLVTFIYEKSKSGDITQGLPKVEQVLEVRSIDS 267
           IRS KPYLATPGATVHGHYGEILY+GDTLVTFIYEKS+SGDITQGLPKVEQVLEVRSIDS
Sbjct: 327 IRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDS 386

Query: 266 ISMNLEKRVEDWNGRITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 87
           ISMNLEKRVE WN RITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH
Sbjct: 387 ISMNLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRH 446

Query: 86  IEIIVRQITSKVLVSEEGMSNVFSPGEL 3
           IEIIVRQITSKVLVSE+GMSNVFSPGEL
Sbjct: 447 IEIIVRQITSKVLVSEDGMSNVFSPGEL 474