BLASTX nr result
ID: Paeonia24_contig00012704
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00012704
(1024 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534373.1| pentatricopeptide repeat-containing protein,... 80 1e-12
ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containi... 79 4e-12
emb|CBI27814.3| unnamed protein product [Vitis vinifera] 76 2e-11
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi... 76 2e-11
ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containi... 76 3e-11
ref|XP_004305327.1| PREDICTED: putative pentatricopeptide repeat... 72 5e-10
ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ... 45 3e-07
ref|XP_006851890.1| hypothetical protein AMTR_s00041p00129840 [A... 44 2e-06
ref|XP_006489434.1| PREDICTED: pentatricopeptide repeat-containi... 40 4e-06
ref|XP_006845697.1| hypothetical protein AMTR_s00019p00238380 [A... 45 5e-06
emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera] 45 7e-06
ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi... 45 7e-06
ref|XP_006827992.1| hypothetical protein AMTR_s00008p00232800 [A... 42 9e-06
ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containi... 40 1e-05
ref|XP_006468706.1| PREDICTED: pentatricopeptide repeat-containi... 40 1e-05
>ref|XP_002534373.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525413|gb|EEF28011.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 207
Score = 80.5 bits (197), Expect = 1e-12
Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLYKIIQ----LSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDS 857
GYADLGPYQEA +LYK + L +TFPFVVRS V+SALKEG +V+CN+IK+GFD
Sbjct: 99 GYADLGPYQEAVMLYKTMHHDGFLPDNYTFPFVVRSCAVISALKEGKEVYCNVIKNGFDL 158
Query: 856 CLFRALWSPY 827
+F +S Y
Sbjct: 159 DVFAQCFSLY 168
>ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 617
Score = 78.6 bits (192), Expect = 4e-12
Identities = 57/131 (43%), Positives = 74/131 (56%), Gaps = 14/131 (10%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLYKIIQLSCY----HTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDS 857
GY++LGP QE+ LYK + L +TFPFV+RS V+SALKEG ++HCNIIKHGF+S
Sbjct: 25 GYSNLGPCQESIFLYKELHLQGVLPDNYTFPFVLRSCSVLSALKEGREIHCNIIKHGFES 84
Query: 856 CLF--RALWSPYTLRTGRFL--------TRK*FLVKWM*RTWLLGLDDNGLCANWVL*KG 707
+F +L S Y ++G L R +V W + G NG+ KG
Sbjct: 85 DVFVQSSLISLYA-QSGETLDSELVFDQMRVRNIVSW--TAMIAGYVQNGIHE-----KG 136
Query: 706 LGVFQLMVASG 674
LGVF MV SG
Sbjct: 137 LGVFLKMVDSG 147
>emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 76.3 bits (186), Expect = 2e-11
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLYKIIQ----LSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDS 857
GYAD GP +EA LY + +TFPFVVRS V+SAL+EG +VHCNI+KHGFDS
Sbjct: 102 GYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDS 161
Query: 856 CLF--RALWSPYT---------LRTGRFLTRK*FLVKWM*RTWLLGLDDNGLCANWVL*K 710
+F +L + Y+ L G + R +V W T ++ G N +
Sbjct: 162 DVFVQSSLVAMYSQSGETLGMELVFGEMVVRN--IVSW---TAVIA----GYVQNRYFKE 212
Query: 709 GLGVFQLMVASG 674
GLGVF+ MV SG
Sbjct: 213 GLGVFREMVGSG 224
>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 76.3 bits (186), Expect = 2e-11
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLYKIIQ----LSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDS 857
GYAD GP +EA LY + +TFPFVVRS V+SAL+EG +VHCNI+KHGFDS
Sbjct: 102 GYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDS 161
Query: 856 CLF--RALWSPYT---------LRTGRFLTRK*FLVKWM*RTWLLGLDDNGLCANWVL*K 710
+F +L + Y+ L G + R +V W T ++ G N +
Sbjct: 162 DVFVQSSLVAMYSQSGETLGMELVFGEMVVRN--IVSW---TAVIA----GYVQNRYFKE 212
Query: 709 GLGVFQLMVASG 674
GLGVF+ MV SG
Sbjct: 213 GLGVFREMVGSG 224
>ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 608
Score = 75.9 bits (185), Expect = 3e-11
Identities = 55/131 (41%), Positives = 74/131 (56%), Gaps = 14/131 (10%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLYKIIQLSCY----HTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDS 857
GY++LGP QE+ LYK + L +TFPFV+RS V+SAL+EG ++HCNIIKHGF+S
Sbjct: 106 GYSNLGPCQESIFLYKEMHLQGILPDNYTFPFVLRSCSVLSALREGREIHCNIIKHGFES 165
Query: 856 CLF--RALWSPYTLRTGRFL--------TRK*FLVKWM*RTWLLGLDDNGLCANWVL*KG 707
+F +L + Y ++G L R +V W + G NG+ KG
Sbjct: 166 DVFVQSSLITLYA-QSGETLDSELVFDQMRVRNIVSW--TAMIAGYVQNGIPE-----KG 217
Query: 706 LGVFQLMVASG 674
LGVF MV SG
Sbjct: 218 LGVFLKMVDSG 228
>ref|XP_004305327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Fragaria vesca subsp. vesca]
Length = 518
Score = 71.6 bits (174), Expect = 5e-10
Identities = 54/126 (42%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLYKIIQLSCY----HTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDS 857
GYAD GP EA LY+ + S + +TFPFVVRS V SAL+EG +VHCNIIK+GF S
Sbjct: 25 GYADRGPCHEAIFLYRKMHQSGFSPDNYTFPFVVRSCAVQSALREGTEVHCNIIKNGFSS 84
Query: 856 CLF--RALWSPYTLRTGRFLTRK*FLVKWM*R---TWLLGLDDNGLCANWVL*KGLGVFQ 692
+F +L S Y + G L + K + R +W + G N +GL V +
Sbjct: 85 DVFVQSSLVSMYA-QNGETLNSELVFNKMVVRNIVSWTAMI--AGYVKNGFYKEGLTVLR 141
Query: 691 LMVASG 674
MVASG
Sbjct: 142 DMVASG 147
>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 758
Score = 45.1 bits (105), Expect(2) = 3e-07
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLY----KIIQLSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDS 857
GY G +++ VL+ +I + TFP +++S G + ++EG +VHC KHGF S
Sbjct: 84 GYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKS 143
Query: 856 CLFRA 842
F A
Sbjct: 144 NSFVA 148
Score = 37.4 bits (85), Expect(2) = 3e-07
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = -3
Query: 854 FVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWT 750
FV +SL+ +YS+ G + ++ +FGEM +N+V WT
Sbjct: 146 FVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWT 180
>ref|XP_006851890.1| hypothetical protein AMTR_s00041p00129840 [Amborella trichopoda]
gi|548855473|gb|ERN13357.1| hypothetical protein
AMTR_s00041p00129840 [Amborella trichopoda]
Length = 744
Score = 43.9 bits (102), Expect(2) = 2e-06
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = -3
Query: 857 VFVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWTG 747
VFV S+L+ +Y++ G I +SE +F EMD +++VTWTG
Sbjct: 492 VFVGSALLDMYAKCGSIEDSERVFSEMDGRSLVTWTG 528
Score = 35.4 bits (80), Expect(2) = 2e-06
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLY-------KIIQLS-CYHTFPFVVRSSGVVSALKEGIQVHCNIIKH 869
GYA Y EA +Y ++QL TF V+ S + +L G ++HC + K
Sbjct: 427 GYAQNELYTEAVEVYFLLASYDNVVQLRPTEFTFVSVISSCAGLLSLGLGRRLHCQVAKL 486
Query: 868 GFDSCLF 848
GF SC+F
Sbjct: 487 GFSSCVF 493
>ref|XP_006489434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
[Citrus sinensis]
Length = 844
Score = 40.4 bits (93), Expect(2) = 4e-06
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLYKIIQLSCY------HTFPFVVRSSGVVSALKEGIQVHCNIIKHGF 863
GY+ +G EA LY ++L+ + TFPFV+ + SA EG+QVH I+K GF
Sbjct: 112 GYSCIGLGVEAISLY--VELAGFGILPDKFTFPFVLNACTKSSAFGEGVQVHGAIVKMGF 169
Query: 862 DSCLF 848
D +F
Sbjct: 170 DRDVF 174
Score = 37.7 bits (86), Expect(2) = 4e-06
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 857 VFVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWT 750
VFV++ L+ Y + G+I + +F EM +N+V+WT
Sbjct: 173 VFVENCLINFYGECGDIVDGRRVFDEMSERNVVSWT 208
>ref|XP_006845697.1| hypothetical protein AMTR_s00019p00238380 [Amborella trichopoda]
gi|548848269|gb|ERN07372.1| hypothetical protein
AMTR_s00019p00238380 [Amborella trichopoda]
Length = 235
Score = 44.7 bits (104), Expect(2) = 5e-06
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLYKIIQ----LSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDS 857
GY G + EA Y +Q + + T+PFV+++ +S + EG +VHC ++K G D+
Sbjct: 87 GYVQNGFFHEAIEFYYQMQSNGVIPDHFTYPFVLKACARLSNIAEGKKVHCKLVKTGLDT 146
Query: 856 CLFRA 842
LF A
Sbjct: 147 ALFVA 151
Score = 33.5 bits (75), Expect(2) = 5e-06
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = -3
Query: 857 VFVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTW 753
+FV +SL+T+Y + E+ E++F EM +++V+W
Sbjct: 148 LFVANSLITMYCKCKEMHAGELVFDEMPERDIVSW 182
>emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 45.1 bits (105), Expect(2) = 7e-06
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLY-----KIIQLSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGF 863
GYA Y+E L+ I+ +C+ TFP V++S G ++AL EG QVHC +IK GF
Sbjct: 173 GYAQSESYREVVFLFFQMKGMDIRPNCF-TFPVVLKSCGKINALIEGEQVHCFLIKCGF 230
Score = 32.3 bits (72), Expect(2) = 7e-06
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 854 FVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWT 750
FV ++L+ +YS G + ++ IF EM +N+V WT
Sbjct: 235 FVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWT 269
>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Vitis vinifera]
Length = 623
Score = 45.1 bits (105), Expect(2) = 7e-06
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLY-----KIIQLSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGF 863
GYA Y+E L+ I+ +C+ TFP V++S G ++AL EG QVHC +IK GF
Sbjct: 110 GYAQSESYREVVFLFFQMKGMDIRPNCF-TFPVVLKSCGKINALIEGEQVHCFLIKCGF 167
Score = 32.3 bits (72), Expect(2) = 7e-06
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 854 FVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWT 750
FV ++L+ +YS G + ++ IF EM +N+V WT
Sbjct: 172 FVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWT 206
>ref|XP_006827992.1| hypothetical protein AMTR_s00008p00232800 [Amborella trichopoda]
gi|548832627|gb|ERM95408.1| hypothetical protein
AMTR_s00008p00232800 [Amborella trichopoda]
Length = 911
Score = 42.4 bits (98), Expect(2) = 9e-06
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = -3
Query: 857 VFVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWT 750
VFV S+L+ +Y++ G I +SE +F EMD +++VTWT
Sbjct: 560 VFVGSALIDMYAKCGSIEDSERVFSEMDGRSLVTWT 595
Score = 34.7 bits (78), Expect(2) = 9e-06
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLYKIIQLSCYH---------TFPFVVRSSGVVSALKEGIQVHCNIIK 872
GYA Y+EA +Y ++ SC + TF V+ S + +L G ++HC + K
Sbjct: 495 GYAQNELYKEAIEVYFLLA-SCDNVVELRPNEFTFGSVISSCTGLLSLGLGRRLHCQVAK 553
Query: 871 HGFDSCLF 848
GF SC+F
Sbjct: 554 LGFSSCVF 561
>ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
isoform X1 [Citrus sinensis]
Length = 587
Score = 40.4 bits (93), Expect(2) = 1e-05
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLY----KIIQLSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDS 857
GYA ++ VL+ K+ + TFP V++S ++AL+EG ++HC ++K+GF +
Sbjct: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
Query: 856 CLF 848
+F
Sbjct: 134 NIF 136
Score = 36.6 bits (83), Expect(2) = 1e-05
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 857 VFVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWT 750
+FV ++L+ +YS I + +FGEMD +N+V WT
Sbjct: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
>ref|XP_006468706.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
isoform X2 [Citrus sinensis]
Length = 538
Score = 40.4 bits (93), Expect(2) = 1e-05
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = -1
Query: 1024 GYADLGPYQEAAVLY----KIIQLSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDS 857
GYA ++ VL+ K+ + TFP V++S ++AL+EG ++HC ++K+GF +
Sbjct: 25 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 84
Query: 856 CLF 848
+F
Sbjct: 85 NIF 87
Score = 36.6 bits (83), Expect(2) = 1e-05
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 857 VFVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWT 750
+FV ++L+ +YS I + +FGEMD +N+V WT
Sbjct: 86 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 121