BLASTX nr result
ID: Paeonia24_contig00012057
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00012057
(621 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera] 148 3e-43
ref|XP_007022613.1| Uncharacterized protein TCM_033423 [Theobrom... 147 1e-42
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] 145 2e-42
ref|XP_007044383.1| DNA/RNA polymerases superfamily protein [The... 148 3e-42
emb|CAN59997.1| hypothetical protein VITISV_020888 [Vitis vinifera] 145 6e-42
emb|CAN68955.1| hypothetical protein VITISV_014191 [Vitis vinifera] 147 1e-41
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] 135 7e-41
emb|CAA73042.1| polyprotein [Ananas comosus] 145 9e-41
ref|XP_007023888.1| DNA/RNA polymerases superfamily protein [The... 145 1e-40
ref|XP_007036977.1| DNA/RNA polymerases superfamily protein [The... 143 4e-40
ref|XP_007023829.1| DNA/RNA polymerases superfamily protein [The... 143 4e-40
ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera] 150 7e-40
ref|XP_007010454.1| Uncharacterized protein TCM_044274 [Theobrom... 143 7e-40
gb|AAP43915.1| integrase [Gossypium herbaceum] 141 7e-40
ref|XP_007032149.1| CCHC-type integrase [Theobroma cacao] gi|508... 142 7e-40
gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsi... 144 1e-39
ref|XP_007028157.1| DNA/RNA polymerases superfamily protein [The... 143 1e-39
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 137 2e-39
ref|XP_007028176.1| DNA/RNA polymerases superfamily protein [The... 142 3e-39
gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subc... 140 4e-39
>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
Length = 1495
Score = 148 bits (373), Expect(2) = 3e-43
Identities = 61/98 (62%), Positives = 78/98 (79%)
Frame = -3
Query: 295 GGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGMKRDVVEFV 116
G +RF GRLCVP D +LR E+L +AH+AKYT+HPG+TKM+ DLKR +WW GMKRD+ +FV
Sbjct: 1082 GSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQFWWSGMKRDIAQFV 1141
Query: 115 ARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
C CQ VKA+HQ+P GLL L IP+WKW+ +TMDF+
Sbjct: 1142 XNCQICQQVKAEHQRPAGLLQPLPIPEWKWDNITMDFV 1179
Score = 53.9 bits (128), Expect(2) = 3e-43
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQ-GRMSLILMQKWWSDLEFLSQHCVCVSSTGDV 445
E L+DY F L Y PGK N VADALSRK G++S + ++++ + +C+S G
Sbjct: 989 ETLEDYDFALHYHPGKANVVADALSRKSYGQLSNLGLREFEMH-AVIEDFELCLSQEGRG 1047
Query: 444 RMMGNMSVQPTLISRIIATQQNDE 373
+ ++S +P +I RI+ Q +DE
Sbjct: 1048 PCLYSISARPMVIQRIVEAQVHDE 1071
>ref|XP_007022613.1| Uncharacterized protein TCM_033423 [Theobroma cacao]
gi|508722241|gb|EOY14138.1| Uncharacterized protein
TCM_033423 [Theobroma cacao]
Length = 809
Score = 147 bits (371), Expect(2) = 1e-42
Identities = 61/106 (57%), Positives = 81/106 (76%)
Frame = -3
Query: 319 SDYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGM 140
S++ ++D G R+CVP D++LR +LEEAH + Y +HPGSTKM+ +K +YWW GM
Sbjct: 577 SEFRLNDDGIFMLRDRICVPKDDQLRRAILEEAHSSAYALHPGSTKMYRTIKESYWWPGM 636
Query: 139 KRDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
KRD+ EFVA+CLTCQ +KA+HQKP G L L IP+WKWE+VTMDF+
Sbjct: 637 KRDIAEFVAKCLTCQQIKAEHQKPSGTLQPLLIPEWKWEHVTMDFV 682
Score = 52.8 bits (125), Expect(2) = 1e-42
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQGRMSLILMQKWWSDLEFLSQHCVCVSSTGDVR 442
EL+KDY + Y PGK N VADALSRK L ++S L + + +++ D
Sbjct: 480 ELIKDYDLVIDYHPGKENVVADALSRKSSSSLATLQSSYFSMLLEMKSLGIQLNNGEDGT 539
Query: 441 MMGNMSVQPTLISRIIATQQNDE 373
++ + V+P+L+++I Q++D+
Sbjct: 540 LLASFVVRPSLLNQIRELQKSDD 562
>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 145 bits (365), Expect(2) = 2e-42
Identities = 62/109 (56%), Positives = 84/109 (77%)
Frame = -3
Query: 328 ERNSDYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWW 149
E + ++S+ + G +RF GRLCVP D +LR E+L +AH+AKYT+HPG+TKM+ DLKR + W
Sbjct: 1167 EIDENWSMYEDGSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQFXW 1226
Query: 148 DGMKRDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
GMKRD+ +FVA C CQ VKA+HQ+P LL L IP+WKW+ +TMDF+
Sbjct: 1227 SGMKRDIAQFVANCQICQQVKAEHQRPAELLQPLPIPKWKWDNITMDFV 1275
Score = 53.9 bits (128), Expect(2) = 2e-42
Identities = 32/92 (34%), Positives = 46/92 (50%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQGRMSLILMQKWWSDLEFLSQHCVCVSSTGDVR 442
E L+DY F L Y PGK N VADALSRK L + + + +C+ G
Sbjct: 1072 ETLEDYDFALHYHPGKANVVADALSRKSYGQLFSLGLREFEMYAVIEDFELCLVQEGRGP 1131
Query: 441 MMGNMSVQPTLISRIIATQQNDETILNKKVSL 346
+ ++S +P +I RI+ Q +DE + K L
Sbjct: 1132 CLYSISARPMVIQRIVEAQVHDEFLEKVKAQL 1163
>ref|XP_007044383.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508708318|gb|EOY00215.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1537
Score = 148 bits (374), Expect(2) = 3e-42
Identities = 65/124 (52%), Positives = 89/124 (71%)
Frame = -3
Query: 373 DYFEQEGKFVFGKPEERNSDYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHP 194
D+ +QE V + + S++ + D G L R+CVP D++LR +LEEAH + Y +HP
Sbjct: 1057 DWLKQE---VQKLQDGKASEFRLSDDGTLMLRDRICVPKDDQLRRAILEEAHYSAYALHP 1113
Query: 193 GSTKMFMDLKRTYWWDGMKRDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVT 14
GSTKM+ +K +YWW GM+RD+ EFVA+CLTCQ +KA+HQKP G L L IP+WKWE+VT
Sbjct: 1114 GSTKMYRTIKESYWWPGMERDIAEFVAKCLTCQQIKAEHQKPSGTLQPLSIPEWKWEHVT 1173
Query: 13 MDFI 2
MDF+
Sbjct: 1174 MDFV 1177
Score = 50.1 bits (118), Expect(2) = 3e-42
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQGRMSLILMQKWWSDLEFLSQHCVCVSSTGDVR 442
EL+KDY + Y P K N VADALSRK L ++S L + + +++ D
Sbjct: 975 ELIKDYDLVIDYHPRKANVVADALSRKSSSSLATLRSSYFSMLLEMKSLGIQLNNGEDGT 1034
Query: 441 MMGNMSVQPTLISRIIATQQNDE 373
++ + V+P+L+++I Q++D+
Sbjct: 1035 LLASFVVRPSLLNQIRELQKSDD 1057
>emb|CAN59997.1| hypothetical protein VITISV_020888 [Vitis vinifera]
Length = 893
Score = 145 bits (366), Expect(2) = 6e-42
Identities = 63/109 (57%), Positives = 84/109 (77%)
Frame = -3
Query: 328 ERNSDYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWW 149
E + ++S+ + G + F GRLCVP D LR E+L +AHKAKYT+HPG+TKM+ DLKR +W
Sbjct: 473 EIDENWSMYEDGSVWFKGRLCVPKDVGLRNELLADAHKAKYTIHPGNTKMYQDLKRQFWC 532
Query: 148 DGMKRDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
+GMKRD+ +FVA C CQ VKA+HQ+P GLL L IP+WKW+ +TMDF+
Sbjct: 533 NGMKRDIAQFVANCQICQQVKAEHQRPAGLLQPLPIPEWKWDNITMDFV 581
Score = 52.0 bits (123), Expect(2) = 6e-42
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQ-GRMSLILMQKWWSDLEFLSQHCVCVSSTGDV 445
E L+DY F L Y PGK N VADALSRK G++S + ++++ + +C+ G
Sbjct: 378 ETLEDYDFALHYHPGKANVVADALSRKNVGQLSSLELREFEMH-AVIEDFELCLGLEGHG 436
Query: 444 RMMGNMSVQPTLISRIIATQQNDETILNKKVSL 346
+ ++ +P +I RI+ Q +DE + K L
Sbjct: 437 PCLYSILARPMVIQRIVEAQVHDEFLEKVKAQL 469
>emb|CAN68955.1| hypothetical protein VITISV_014191 [Vitis vinifera]
Length = 480
Score = 147 bits (370), Expect(2) = 1e-41
Identities = 63/109 (57%), Positives = 84/109 (77%)
Frame = -3
Query: 328 ERNSDYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWW 149
E + ++S+ G +RF GRLCVP D +LR E+L AH+AKY +H GSTKM+ DLKR +WW
Sbjct: 97 EVDENWSMHVDGSVRFRGRLCVPRDVZLRNELLTYAHRAKYIIHLGSTKMYQDLKRXFWW 156
Query: 148 DGMKRDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
GMKRD+V++VA C TCQ VK +HQ+P GLL L IP+WKW+++TMDF+
Sbjct: 157 SGMKRDIVQYVANCQTCQQVKTEHQRPVGLLQPLPIPEWKWDHITMDFV 205
Score = 49.3 bits (116), Expect(2) = 1e-41
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQ-GRMSLILMQKWWSDLEFLSQHCVCVSSTGDV 445
E L+DY F Y PGK N V DALSRK G++S + ++++ + + +C+S G
Sbjct: 2 ETLEDYDFAPHYHPGKANVVVDALSRKSYGQLSSLGLREFEMH-AVIEDYELCLSWEGQG 60
Query: 444 RMMGNMSVQPTLISRIIATQQNDETILNKKVSL 346
+ ++ +P I RI+ Q +DE + K L
Sbjct: 61 PCLYSILARPMFIQRIVEAQVHDEFLEKVKARL 93
>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
Length = 1475
Score = 135 bits (340), Expect(2) = 7e-41
Identities = 55/98 (56%), Positives = 75/98 (76%)
Frame = -3
Query: 295 GGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGMKRDVVEFV 116
G LRF GR+CVP L +L E H+++Y++HPG+TKM+ DL++ YWW GM+RD+ +FV
Sbjct: 1171 GVLRFAGRICVPRVGDLIQLILSEGHESRYSIHPGTTKMYRDLRQHYWWSGMRRDIADFV 1230
Query: 115 ARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
+RCL CQ VKA+H +PGG+ L IP+WKWE +TMDFI
Sbjct: 1231 SRCLCCQQVKAEHLRPGGVFKRLPIPEWKWERITMDFI 1268
Score = 58.5 bits (140), Expect(2) = 7e-41
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRK---QGRMSLILMQK--WWSDLEFLSQHCVCVSS 457
ELLKDY + Y PGK N VADALSRK G ++ + +++ D++FL+ V +
Sbjct: 1061 ELLKDYDLSILYHPGKANVVADALSRKAVSMGSLAFLSVEERPLAMDIQFLANSMVRLDI 1120
Query: 456 TGDVRMMGNMSVQPTLISRIIATQQNDETIL 364
+ R++ +M VQ +L+ RI Q DE ++
Sbjct: 1121 SDSRRVLAHMGVQSSLLDRIRGCQFEDEALV 1151
>emb|CAA73042.1| polyprotein [Ananas comosus]
Length = 871
Score = 145 bits (365), Expect(2) = 9e-41
Identities = 64/119 (53%), Positives = 86/119 (72%)
Frame = -3
Query: 358 EGKFVFGKPEERNSDYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKM 179
+GK V G D+++D G +RF GR+CVP D ++ ++L+EAH+A Y +HPG TKM
Sbjct: 490 KGKMVDGC----TGDFTLDGDGLMRFRGRICVPADSGIKEDILQEAHRAPYAIHPGGTKM 545
Query: 178 FMDLKRTYWWDGMKRDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
+ DLK YWW G+K+DV EFVA+CLTCQ VKA+H+ P G L +L IP WKWE +TMDF+
Sbjct: 546 YKDLKLLYWWPGIKKDVGEFVAKCLTCQQVKAEHRVPAGKLQSLPIPVWKWEKITMDFV 604
Score = 48.5 bits (114), Expect(2) = 9e-41
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQGR---MSLILMQKWWSDLEFLSQHCVCVSSTG 451
ELLKDY + Y PGK N VADALSRK M ++ + ++ L V +
Sbjct: 402 ELLKDYDLTILYHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTPDT-- 459
Query: 450 DVRMMGNMSVQPTLISRIIATQQND---ETILNKKVSLC 343
+R+M + VQPTL+ RI Q +D + I K V C
Sbjct: 460 PMRLM-TLVVQPTLLDRIKEKQASDVELQKIKGKMVDGC 497
>ref|XP_007023888.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508779254|gb|EOY26510.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1290
Score = 145 bits (365), Expect(2) = 1e-40
Identities = 60/106 (56%), Positives = 79/106 (74%)
Frame = -3
Query: 319 SDYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGM 140
S++ + D G L R+CVP D++LR +LEEAH + Y +HPGSTKM+ +K +YWW GM
Sbjct: 861 SEFRLSDDGTLMLRDRICVPKDDQLRRAILEEAHSSAYALHPGSTKMYQTIKESYWWPGM 920
Query: 139 KRDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
KRD+ EFVA+CL CQ +KA+HQK G L L IP+WKWE+VTMDF+
Sbjct: 921 KRDIAEFVAKCLICQQIKAEHQKSSGTLQPLPIPEWKWEHVTMDFV 966
Score = 48.1 bits (113), Expect(2) = 1e-40
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQGRMSLILMQKWWSDLEFLSQHCVCVSSTGDVR 442
EL+KDY + Y PGK N V DALSRK L ++ L + + +++ D
Sbjct: 764 ELIKDYDLVIDYHPGKANVVTDALSRKSSSSLATLRSSYFPMLLEMKSLGIQLNNGEDGT 823
Query: 441 MMGNMSVQPTLISRIIATQQNDE 373
++ + V+P+L+++I Q+ D+
Sbjct: 824 LLASFVVRPSLLNQIRELQKFDD 846
>ref|XP_007036977.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508774222|gb|EOY21478.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 878
Score = 143 bits (361), Expect(2) = 4e-40
Identities = 61/98 (62%), Positives = 77/98 (78%)
Frame = -3
Query: 295 GGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGMKRDVVEFV 116
G LR+ RL VP+ + LR E+LEEAH A Y VHPG+TKM+ DLK YWW+G+KRDV EFV
Sbjct: 616 GVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFV 675
Query: 115 ARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
++CL CQ VKA+HQKP GLL L +P+WKWE++ MDF+
Sbjct: 676 SKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFV 713
Score = 47.8 bits (112), Expect(2) = 4e-40
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQ---------GRMSLILMQKWWSDLEFLSQHCV 469
ELLKDY + Y PGK N VADALSRK GR SL+ ++ L V
Sbjct: 508 ELLKDYDCTILYHPGKANVVADALSRKSMGSLAHIFIGRRSLV------REIHSLGDIGV 561
Query: 468 CVSSTGDVRMMGNMSVQPTLISRIIATQQNDETIL 364
+ ++ + V+P L+ RI Q DE ++
Sbjct: 562 RLEVAETNALLAHFRVRPILMDRIKEAQSKDEFVI 596
>ref|XP_007023829.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508779195|gb|EOY26451.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 679
Score = 143 bits (361), Expect(2) = 4e-40
Identities = 61/98 (62%), Positives = 77/98 (78%)
Frame = -3
Query: 295 GGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGMKRDVVEFV 116
G LR+ RL VP+ + LR E+LEEAH A Y VHPG+TKM+ DLK YWW+G+KRDV EFV
Sbjct: 239 GVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFV 298
Query: 115 ARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
++CL CQ VKA+HQKP GLL L +P+WKWE++ MDF+
Sbjct: 299 SKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFV 336
Score = 47.8 bits (112), Expect(2) = 4e-40
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQ---------GRMSLILMQKWWSDLEFLSQHCV 469
ELLKDY + Y PGK N VADALSRK GR SL+ ++ L V
Sbjct: 131 ELLKDYDCTILYHPGKANVVADALSRKSMGSLAHISIGRRSLV------REIHSLGDIGV 184
Query: 468 CVSSTGDVRMMGNMSVQPTLISRIIATQQNDETIL 364
+ ++ + V+P L+ RI Q DE ++
Sbjct: 185 RLEVAETNALLAHFRVRPILMDRIKEAQSKDEFVI 219
>ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera]
Length = 937
Score = 150 bits (378), Expect(2) = 7e-40
Identities = 64/105 (60%), Positives = 81/105 (77%)
Frame = -3
Query: 316 DYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGMK 137
D+ + D G LRF+ RLCVPND LR E LEEAH ++ +HPG TKM+ DL++ YWW GMK
Sbjct: 102 DFVLSDDGILRFMTRLCVPNDGDLRREFLEEAHCSRLAIHPGGTKMYKDLRQNYWWSGMK 161
Query: 136 RDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
RD+ +FVARCL CQ VKA+HQ+P G L L IP+WKWE++TMDF+
Sbjct: 162 RDIAQFVARCLVCQQVKAEHQQPVGSLQPLAIPEWKWEHITMDFV 206
Score = 40.4 bits (93), Expect(2) = 7e-40
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = -1
Query: 588 YRPGKVNKVADALSRKQ-GRMSLI--LMQKWWSDLEFLSQHCVCVSSTGDVRMMGNMSVQ 418
Y GK N VADALS+K G ++ I ++ DL + H + S ++ N VQ
Sbjct: 15 YHLGKANAVADALSKKSVGSLAAIRGCQRQLLEDLRSVQVHMRVLDSGA---LVANFRVQ 71
Query: 417 PTLISRIIATQQND 376
P L+ RI A Q+ND
Sbjct: 72 PNLVGRIKALQKND 85
>ref|XP_007010454.1| Uncharacterized protein TCM_044274 [Theobroma cacao]
gi|508727367|gb|EOY19264.1| Uncharacterized protein
TCM_044274 [Theobroma cacao]
Length = 860
Score = 143 bits (361), Expect(2) = 7e-40
Identities = 61/98 (62%), Positives = 77/98 (78%)
Frame = -3
Query: 295 GGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGMKRDVVEFV 116
G LR+ RL VP+ + LR E+LEEAH A Y VHPG+TKM+ DLK YWW+G+KRDV EFV
Sbjct: 450 GVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFV 509
Query: 115 ARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
++CL CQ VKA+HQKP GLL L +P+WKWE++ MDF+
Sbjct: 510 SKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFV 547
Score = 47.0 bits (110), Expect(2) = 7e-40
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQ---------GRMSLILMQKWWSDLEFLSQHCV 469
ELLKDY + Y PGK N VADALSRK GR SL+ ++ L V
Sbjct: 342 ELLKDYDCTILYHPGKANVVADALSRKSMGSLAHISIGRRSLV------REIHSLGDIGV 395
Query: 468 CVSSTGDVRMMGNMSVQPTLISRIIATQQNDETIL 364
+ ++ + V+P L+ +I Q DE ++
Sbjct: 396 RLEVAETSALLAHFRVRPILMDKIKEAQSKDEFVI 430
>gb|AAP43915.1| integrase [Gossypium herbaceum]
Length = 350
Score = 141 bits (355), Expect(2) = 7e-40
Identities = 60/108 (55%), Positives = 80/108 (74%)
Frame = -3
Query: 325 RNSDYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWD 146
+ S++ +DD LRF RLCVP + +L +L EAH ++ +HPGSTKM+ DLKR +WW
Sbjct: 155 KESEFQIDDDDCLRFRSRLCVPKNSELILIILNEAHCSRMAIHPGSTKMYNDLKRRFWWH 214
Query: 145 GMKRDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
GMKRD+ +FV+RCL CQ VKA+HQ P GLL + IP+WKW+ VTMDF+
Sbjct: 215 GMKRDIFDFVSRCLICQQVKAEHQVPSGLLQPITIPEWKWDRVTMDFV 262
Score = 49.3 bits (116), Expect(2) = 7e-40
Identities = 36/103 (34%), Positives = 49/103 (47%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQGRMSLILMQKWWSDLEFLSQHCVCVSSTGDVR 442
ELLKDY + Y PGK N VADALSRK L L V +S D
Sbjct: 74 ELLKDYELVIDYHPGKANMVADALSRK--------------SLFALRAMNVYLSILPDNV 119
Query: 441 MMGNMSVQPTLISRIIATQQNDETILNKKVSLCLVSLRSGIQI 313
++ + +P L +I Q+ DE +L K+ C+++ S QI
Sbjct: 120 LVAELKAKPLLTHQIREAQKVDEELLAKRAE-CVLNKESEFQI 161
>ref|XP_007032149.1| CCHC-type integrase [Theobroma cacao] gi|508711178|gb|EOY03075.1|
CCHC-type integrase [Theobroma cacao]
Length = 246
Score = 142 bits (357), Expect(2) = 7e-40
Identities = 60/98 (61%), Positives = 76/98 (77%)
Frame = -3
Query: 295 GGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGMKRDVVEFV 116
G LR+ RL VP+ + LR E+LEEAH A Y VHPG+TKM+ DLK YWW+G+KRDV EFV
Sbjct: 110 GVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFV 169
Query: 115 ARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
++CL CQ VK +HQKP GLL L +P+WKWE++ MDF+
Sbjct: 170 SKCLVCQQVKVEHQKPAGLLQPLPVPEWKWEHIAMDFV 207
Score = 48.5 bits (114), Expect(2) = 7e-40
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQ---------GRMSLILMQKWWSDLEFLSQHCV 469
ELLKDY + + Y PGK N VADALSRK GR SL+ ++ L V
Sbjct: 2 ELLKDYDYTILYHPGKANVVADALSRKSMGSLAHISIGRRSLV------REIHSLGDIGV 55
Query: 468 CVSSTGDVRMMGNMSVQPTLISRIIATQQNDETIL 364
+ ++ + V+P L+ +I Q DE ++
Sbjct: 56 RLEVAETNALLAHFRVRPILMDKIKEAQSKDEFVI 90
>gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1611
Score = 144 bits (362), Expect(2) = 1e-39
Identities = 60/121 (49%), Positives = 88/121 (72%)
Frame = -3
Query: 364 EQEGKFVFGKPEERNSDYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGST 185
++ + + G + ++Y + G + GR+CVPND L+ E+L EAH++K+++HPGS
Sbjct: 1120 QERDEEIKGWAQNNKTEYQTSNNGTIVVNGRVCVPNDRALKEEILREAHQSKFSIHPGSN 1179
Query: 184 KMFMDLKRTYWWDGMKRDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDF 5
KM+ DLKR Y W GMK+DV +VA+C TCQ+VKA+HQ P GLL NL IP+WKW+++TMDF
Sbjct: 1180 KMYRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLPIPEWKWDHITMDF 1239
Query: 4 I 2
+
Sbjct: 1240 V 1240
Score = 45.8 bits (107), Expect(2) = 1e-39
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQGRMSLILMQKWWSDLEFLSQHCVCVSSTGDVR 442
EL+ DY D+ Y PGK N+VADALSR R S + ++ DL + + + +V
Sbjct: 1044 ELVADYNLDIAYHPGKANQVADALSR---RRSEVEAERSQVDLVNMMGTLHVNALSKEVE 1100
Query: 441 MMG-NMSVQPTLISRIIATQQNDETI 367
+G + Q L+SRI Q+ DE I
Sbjct: 1101 PLGLGAADQADLLSRIRLAQERDEEI 1126
>ref|XP_007028157.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508716762|gb|EOY08659.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 937
Score = 143 bits (361), Expect(2) = 1e-39
Identities = 60/98 (61%), Positives = 77/98 (78%)
Frame = -3
Query: 295 GGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGMKRDVVEFV 116
G LR+ RL VP+ + LR E+LEEAH A Y +HPG+TKM+ DLK YWW+G+KRDV EFV
Sbjct: 469 GVLRYGTRLYVPDSDGLRREILEEAHMAAYVIHPGATKMYQDLKEVYWWEGLKRDVAEFV 528
Query: 115 ARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
++CL CQ VKA+HQKP GLL L +P+WKWE++ MDF+
Sbjct: 529 SKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFV 566
Score = 46.2 bits (108), Expect(2) = 1e-39
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQ---------GRMSLILMQKWWSDLEFLSQHCV 469
ELLKDY + + PGK N VADALSRK GR SL+ ++ L V
Sbjct: 361 ELLKDYDCTILHHPGKANVVADALSRKSMGSLAHISIGRRSLV------KEIHSLGDIGV 414
Query: 468 CVSSTGDVRMMGNMSVQPTLISRIIATQQNDETIL 364
+ ++ + V+P L+ RI Q DE ++
Sbjct: 415 RLEVAETNALLAHFRVRPILMDRIKEAQSKDEFVI 449
>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 137 bits (346), Expect(2) = 2e-39
Identities = 58/104 (55%), Positives = 78/104 (75%)
Frame = -3
Query: 313 YSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGMKR 134
+S D+ G + F R+CVPN ++L+ +L+EAH++ Y++HPGSTKM+ DLK YWW MKR
Sbjct: 605 FSEDEQGTVWFGNRICVPNQQELKQSILKEAHESPYSIHPGSTKMYQDLKEKYWWVSMKR 664
Query: 133 DVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
++ EFVA C CQ VKA+HQ+P GLL L IP+WKWE + MDFI
Sbjct: 665 EIAEFVAHCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFI 708
Score = 51.6 bits (122), Expect(2) = 2e-39
Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQGRMSLILMQKWWSD---------LEFLSQHCV 469
EL+KDY + Y PGK N VADALSRK + IL+QK + LE ++Q CV
Sbjct: 509 ELIKDYDLGIHYHPGKANVVADALSRK-AYCNTILVQKNQPELYEELKHLNLEIVNQGCV 567
Query: 468 CVSSTGDVRMMGNMSVQPTLISRIIATQQNDETILNKKVSL 346
+ VQPTL S+I Q DE I K ++
Sbjct: 568 -----------NALEVQPTLQSQIREKQLEDEDIKEIKKNM 597
>ref|XP_007028176.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508716781|gb|EOY08678.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 666
Score = 142 bits (357), Expect(2) = 3e-39
Identities = 60/98 (61%), Positives = 77/98 (78%)
Frame = -3
Query: 295 GGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYWWDGMKRDVVEFV 116
G LR+ RL VP+ + LR ++LEEAH A Y VHPG+TKM+ DLK YWW+G+KRDV EFV
Sbjct: 333 GVLRYGTRLYVPDGDGLRRKILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFV 392
Query: 115 ARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
++CL CQ VKA+HQKP GLL L +P+WKWE++ MDF+
Sbjct: 393 SKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFV 430
Score = 46.6 bits (109), Expect(2) = 3e-39
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRKQ---------GRMSLILMQKWWSDLEFLSQHCV 469
ELLKDY + Y PGK N VADALSRK GR SL+ ++ L V
Sbjct: 225 ELLKDYDCTILYHPGKANVVADALSRKSMGSLAHISIGRRSLV------REIHSLGDIGV 278
Query: 468 CVSSTGDVRMMGNMSVQPTLISRIIATQQNDETIL 364
+ ++ + V+P L+ +I Q DE ++
Sbjct: 279 RLEVAETNALLAHFRVRPILMDKIKEAQSKDEFVI 313
>gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 140 bits (354), Expect(2) = 4e-39
Identities = 60/110 (54%), Positives = 85/110 (77%)
Frame = -3
Query: 331 EERNSDYSVDDAGGLRFLGRLCVPNDEKLRAEVLEEAHKAKYTVHPGSTKMFMDLKRTYW 152
E++++D+S+DD G + + R+CVP ++LR +L+EAH++ Y++HPGSTKM+ D+K +W
Sbjct: 1308 EKKDTDFSIDDQGTVWYGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFW 1367
Query: 151 WDGMKRDVVEFVARCLTCQMVKAQHQKPGGLL*NLEIPQWKWEYVTMDFI 2
W GMKRDV E+VA C CQ VKA+HQ+P GLL L IP+WKWE + MDFI
Sbjct: 1368 WAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFI 1417
Score = 47.4 bits (111), Expect(2) = 4e-39
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = -1
Query: 621 ELLKDYTFDLQYRPGKVNKVADALSRK------QGRMSLILMQKWWSDLEFLSQHCVCVS 460
EL+KDY + Y PGK N VADALSRK Q R + DLE L + V
Sbjct: 1218 ELIKDYDLGIHYHPGKANVVADALSRKTYCNVDQIRPD---QDRLCRDLEKLR---LTVV 1271
Query: 459 STGDVRMMGNMSVQPTLISRIIATQQNDETI 367
+G + +++VQPTL S+I Q++DE I
Sbjct: 1272 QSG---VAASLTVQPTLESQIRKAQKDDEGI 1299