BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00010242
         (2014 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   518   e-144
ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containi...   512   e-142
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   506   e-140
ref|XP_007022703.1| Pentatricopeptide repeat (PPR) superfamily p...   493   e-136
ref|XP_007022702.1| Pentatricopeptide repeat (PPR) superfamily p...   493   e-136
ref|XP_007022700.1| Pentatricopeptide repeat superfamily protein...   493   e-136
ref|XP_002305195.1| pentatricopeptide repeat-containing family p...   493   e-136
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   474   e-131
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...   460   e-127
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi...   458   e-126
ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, part...   450   e-123
ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citr...   449   e-123
ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containi...   449   e-123
ref|XP_007022701.1| Pentatricopeptide repeat superfamily protein...   438   e-120
ref|XP_007022704.1| Pentatricopeptide repeat (PPR) superfamily p...   437   e-120
gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]     430   e-117
ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containi...   418   e-114
gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus...   410   e-111
ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containi...   403   e-109
ref|XP_002887023.1| pentatricopeptide repeat-containing protein ...   395   e-107

>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  518 bits (1334), Expect = e-144
 Identities = 247/373 (66%), Positives = 308/373 (82%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RM    FDVC YL +HGFSL LI+FN L HVVQKS +   VW+IYE MI+ R YPNEV++
Sbjct: 170  RMFEICFDVCCYLEEHGFSLSLISFNTLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSV 229

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
              M+SALCKEG LQ+FVD+LDR+HGKRC P+VIVNT +IFR++EEGR+E+GM++LKR+LQ
Sbjct: 230  SVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQ 289

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNMI+DT+++SL+ +AK K G +DSAWEVYEEML RGFH N+FVYT FIG++C EGRIEE
Sbjct: 290  KNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEE 349

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A+ L+Q+ME  GL PY ET++ LI GC+K G+LEE LR CE+MM+R +VPSC AFN M  
Sbjct: 350  ANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAG 409

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE+  +K A+ MLT+LLDKGF+PDEITYS+ IA YGK+GE+Q+VLKLY+EMEYRSLSP
Sbjct: 410  KLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSP 469

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
            G   F  LI SLCQC KLE+AEKYL+IMKDRSIA S+C+YE LI+S++EKGD+ RA QL+
Sbjct: 470  GLLAFESLIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISSYFEKGDELRASQLH 529

Query: 932  KDMISDGLKPSWS 894
             +M+S GLKPS S
Sbjct: 530  NEMVSRGLKPSCS 542


>ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 553

 Score =  512 bits (1318), Expect = e-142
 Identities = 246/373 (65%), Positives = 300/373 (80%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            R+   AFDVC YL + GFSL LI+FN L HVV KS  N  VW IY+ M++N  YPNE TI
Sbjct: 171  RLFEVAFDVCCYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 230

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            RT++SALCK G+LQ +VD+LDR+HGKRC PMVIVNTSLI RI++E RIEEGMVLLKRML+
Sbjct: 231  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 290

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNMI DT+A+SL+V+AK K+GN++SA  VYEEMLKRGF  NSFVYT+FIGAYC  G+IEE
Sbjct: 291  KNMIHDTIAYSLIVYAKVKMGNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 350

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A+CL+QEME  GLKPY ET++ LI GCAK  ++EESL +CE+MM R+++PSCSAFNEM+ 
Sbjct: 351  ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 410

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE  + K ANGMLT+ LDKGF P+EITYSH I GY K GE+QEVLKLY+EMEY+S+SP
Sbjct: 411  RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 470

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
                +T LI SLCQCGKLEEA+KY KIMK  S+ P   IYE+L+  H EKG+K +AL L 
Sbjct: 471  TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 530

Query: 932  KDMISDGLKPSWS 894
            ++M+S+GLKPS S
Sbjct: 531  EEMVSEGLKPSTS 543



 Score = 83.2 bits (204), Expect = 4e-13
 Identities = 60/246 (24%), Positives = 112/246 (45%)
 Frame = -3

Query: 1631 VAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQE 1452
            + F L+V   +K+   + A++V   + +RGF  +   + + I    +  R +    + Q 
Sbjct: 158  LVFDLLVQTYSKMRLFEVAFDVCCYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQH 217

Query: 1451 MEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDD 1272
            M      P   T  TLI    KGG+L+  +   +++  +   P       ++  + + + 
Sbjct: 218  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 277

Query: 1271 LKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTL 1092
            ++    +L  +L K  I D I YS  +    K+G ++  L +Y EM  R  S  + V+T 
Sbjct: 278  IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMGNLESALVVYEEMLKRGFSANSFVYTT 337

Query: 1091 LIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDG 912
             IG+ C+ GK+EEA   ++ M++  + P    +  LI    +    + +L   + M+S  
Sbjct: 338  FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 397

Query: 911  LKPSWS 894
            L PS S
Sbjct: 398  LLPSCS 403


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  506 bits (1302), Expect = e-140
 Identities = 239/365 (65%), Positives = 302/365 (82%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RM    FDVC YL +HGFSL LI+FN L HVVQKS +   VW+IYE MI+ R YPNEV++
Sbjct: 170  RMFEICFDVCCYLEEHGFSLSLISFNXLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSV 229

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
              M+SALCKEG LQ+FVD+LDR+HGKRC P+VIVNT +IFR++EEGR+E+GM++LKR+LQ
Sbjct: 230  SVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQ 289

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNMI+DT+++SL+ +AK K G +DSAWEVYEEML RGFH N+FVYT FIG++C EGRIEE
Sbjct: 290  KNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEE 349

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A+ L+Q+ME  GL PY ET++ LI GC+K G+LEE LR CE+MM+R +VPSC AFN M  
Sbjct: 350  ANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAG 409

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE+  +K A+ MLT+LLDKGF+PDEITYS+ IA YGK+GE+Q+VLKLY+EMEYRSLSP
Sbjct: 410  KLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSP 469

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
            G  VF  +I SLCQC KLE+AEKYL+IMKDRSIA S+C+YE LI+ ++EKGD+ RA QL+
Sbjct: 470  GLLVFESIIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISGYFEKGDELRASQLH 529

Query: 932  KDMIS 918
             +M++
Sbjct: 530  NEMLT 534



 Score =  104 bits (260), Expect = 1e-19
 Identities = 65/281 (23%), Positives = 123/281 (43%), Gaps = 35/281 (12%)
 Frame = -3

Query: 1640 IDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCL 1461
            +  ++F+ ++H   K  N    W++YE M++   + N    +  I A C+EG +++   +
Sbjct: 189  LSLISFNXLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDM 248

Query: 1460 IQEMEGKGLKPY-----------------------------------GETYDTLIVGCAK 1386
            +  + GK   P                                      +Y  +     K
Sbjct: 249  LDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVK 308

Query: 1385 GGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEIT 1206
             G L+ +    E+M+ R   P+   +   + + C    ++ AN ++  + + G +P + T
Sbjct: 309  YGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDET 368

Query: 1205 YSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMK 1026
            ++  IAG  K G ++E L+L   M  R L P    F L+ G LC+ G ++ A++ L ++ 
Sbjct: 369  FNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLL 428

Query: 1025 DRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDGLKP 903
            D+   P    Y  LIAS+ + G+ ++ L+LY +M    L P
Sbjct: 429  DKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSP 469


>ref|XP_007022703.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            4 [Theobroma cacao] gi|508722331|gb|EOY14228.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 4 [Theobroma cacao]
          Length = 569

 Score =  493 bits (1269), Expect = e-136
 Identities = 235/375 (62%), Positives = 296/375 (78%), Gaps = 1/375 (0%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RML  AF+VC YL  HGFSL L++FN L H + KS  N+ VW++YE MI+ R YPNE+TI
Sbjct: 177  RMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITI 236

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            RTM+SALCKEGKLQ  VD+LD++ GKRC P+VIVNT L+F+++EEGRIE+GM LLKRMLQ
Sbjct: 237  RTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQ 296

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KN+I+D++A+S VVH K KLGN++ AWEV+EEMLKRGF  NSF+++SFI AY   GRI E
Sbjct: 297  KNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHE 356

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A  +++EME  GLKPY ET++ LI GCAK G+++ S+R CE+M+ R +VPSCS FNEMV 
Sbjct: 357  AENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVR 416

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE  D + AN +LT++LDKGF+P+E TYSH IAGYGK G +Q+V KLY+EMEY+SLSP
Sbjct: 417  GLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSP 476

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
            G  VFT LI  LC CGKLEEAE+YL+IMKDRS+  S  IYEALI  H+EKGDK  A  +Y
Sbjct: 477  GLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEKGDKTGAGIIY 536

Query: 932  KDMISDGLKP-SWSN 891
             +M++ G+KP  W N
Sbjct: 537  NEMVARGMKPHKWGN 551



 Score = 98.6 bits (244), Expect = 9e-18
 Identities = 71/327 (21%), Positives = 145/327 (44%), Gaps = 38/327 (11%)
 Frame = -3

Query: 1766 VHGKRCPPM-VIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMII--DTVAFSLVVHAKAK 1596
            VH K+ P   ++++++L     +  R      +L+ +L    ++   T+ F L+V A AK
Sbjct: 120  VHAKQLPEAKILLHSALKTSAPDSTR----SCILESLLGSYNVVGSSTLVFDLLVQAYAK 175

Query: 1595 LGNIDSA-----------------------------------WEVYEEMLKRGFHENSFV 1521
            L  ++ A                                   W+VYE M+++  + N   
Sbjct: 176  LRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEIT 235

Query: 1520 YTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMM 1341
              + I A C+EG+++    L+ ++ GK   P       L+    + G++E+ +   ++M+
Sbjct: 236  IRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRML 295

Query: 1340 EREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQ 1161
            ++ ++    A++ +V    +  +L+LA  +   +L +GFI +   +S FI  Y + G + 
Sbjct: 296  QKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIH 355

Query: 1160 EVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALI 981
            E   +  EME   L P +  F  LI    + G+++ + ++ + M  R + PS   +  ++
Sbjct: 356  EAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMV 415

Query: 980  ASHYEKGDKKRALQLYKDMISDGLKPS 900
                E GD + A  L   ++  G  P+
Sbjct: 416  RGLCEIGDSENANALLTLVLDKGFLPN 442


>ref|XP_007022702.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            3 [Theobroma cacao] gi|508722330|gb|EOY14227.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 3 [Theobroma cacao]
          Length = 563

 Score =  493 bits (1269), Expect = e-136
 Identities = 235/375 (62%), Positives = 296/375 (78%), Gaps = 1/375 (0%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RML  AF+VC YL  HGFSL L++FN L H + KS  N+ VW++YE MI+ R YPNE+TI
Sbjct: 177  RMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITI 236

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            RTM+SALCKEGKLQ  VD+LD++ GKRC P+VIVNT L+F+++EEGRIE+GM LLKRMLQ
Sbjct: 237  RTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQ 296

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KN+I+D++A+S VVH K KLGN++ AWEV+EEMLKRGF  NSF+++SFI AY   GRI E
Sbjct: 297  KNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHE 356

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A  +++EME  GLKPY ET++ LI GCAK G+++ S+R CE+M+ R +VPSCS FNEMV 
Sbjct: 357  AENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVR 416

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE  D + AN +LT++LDKGF+P+E TYSH IAGYGK G +Q+V KLY+EMEY+SLSP
Sbjct: 417  GLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSP 476

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
            G  VFT LI  LC CGKLEEAE+YL+IMKDRS+  S  IYEALI  H+EKGDK  A  +Y
Sbjct: 477  GLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEKGDKTGAGIIY 536

Query: 932  KDMISDGLKP-SWSN 891
             +M++ G+KP  W N
Sbjct: 537  NEMVARGMKPHKWGN 551



 Score = 98.6 bits (244), Expect = 9e-18
 Identities = 71/327 (21%), Positives = 145/327 (44%), Gaps = 38/327 (11%)
 Frame = -3

Query: 1766 VHGKRCPPM-VIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMII--DTVAFSLVVHAKAK 1596
            VH K+ P   ++++++L     +  R      +L+ +L    ++   T+ F L+V A AK
Sbjct: 120  VHAKQLPEAKILLHSALKTSAPDSTR----SCILESLLGSYNVVGSSTLVFDLLVQAYAK 175

Query: 1595 LGNIDSA-----------------------------------WEVYEEMLKRGFHENSFV 1521
            L  ++ A                                   W+VYE M+++  + N   
Sbjct: 176  LRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEIT 235

Query: 1520 YTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMM 1341
              + I A C+EG+++    L+ ++ GK   P       L+    + G++E+ +   ++M+
Sbjct: 236  IRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRML 295

Query: 1340 EREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQ 1161
            ++ ++    A++ +V    +  +L+LA  +   +L +GFI +   +S FI  Y + G + 
Sbjct: 296  QKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIH 355

Query: 1160 EVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALI 981
            E   +  EME   L P +  F  LI    + G+++ + ++ + M  R + PS   +  ++
Sbjct: 356  EAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMV 415

Query: 980  ASHYEKGDKKRALQLYKDMISDGLKPS 900
                E GD + A  L   ++  G  P+
Sbjct: 416  RGLCEIGDSENANALLTLVLDKGFLPN 442


>ref|XP_007022700.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
            [Theobroma cacao] gi|508722328|gb|EOY14225.1|
            Pentatricopeptide repeat superfamily protein, putative
            isoform 1 [Theobroma cacao]
          Length = 596

 Score =  493 bits (1269), Expect = e-136
 Identities = 235/375 (62%), Positives = 296/375 (78%), Gaps = 1/375 (0%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RML  AF+VC YL  HGFSL L++FN L H + KS  N+ VW++YE MI+ R YPNE+TI
Sbjct: 177  RMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITI 236

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            RTM+SALCKEGKLQ  VD+LD++ GKRC P+VIVNT L+F+++EEGRIE+GM LLKRMLQ
Sbjct: 237  RTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQ 296

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KN+I+D++A+S VVH K KLGN++ AWEV+EEMLKRGF  NSF+++SFI AY   GRI E
Sbjct: 297  KNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHE 356

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A  +++EME  GLKPY ET++ LI GCAK G+++ S+R CE+M+ R +VPSCS FNEMV 
Sbjct: 357  AENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVR 416

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE  D + AN +LT++LDKGF+P+E TYSH IAGYGK G +Q+V KLY+EMEY+SLSP
Sbjct: 417  GLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSP 476

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
            G  VFT LI  LC CGKLEEAE+YL+IMKDRS+  S  IYEALI  H+EKGDK  A  +Y
Sbjct: 477  GLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEKGDKTGAGIIY 536

Query: 932  KDMISDGLKP-SWSN 891
             +M++ G+KP  W N
Sbjct: 537  NEMVARGMKPHKWGN 551



 Score = 98.6 bits (244), Expect = 9e-18
 Identities = 71/327 (21%), Positives = 145/327 (44%), Gaps = 38/327 (11%)
 Frame = -3

Query: 1766 VHGKRCPPM-VIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMII--DTVAFSLVVHAKAK 1596
            VH K+ P   ++++++L     +  R      +L+ +L    ++   T+ F L+V A AK
Sbjct: 120  VHAKQLPEAKILLHSALKTSAPDSTR----SCILESLLGSYNVVGSSTLVFDLLVQAYAK 175

Query: 1595 LGNIDSA-----------------------------------WEVYEEMLKRGFHENSFV 1521
            L  ++ A                                   W+VYE M+++  + N   
Sbjct: 176  LRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEIT 235

Query: 1520 YTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMM 1341
              + I A C+EG+++    L+ ++ GK   P       L+    + G++E+ +   ++M+
Sbjct: 236  IRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRML 295

Query: 1340 EREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQ 1161
            ++ ++    A++ +V    +  +L+LA  +   +L +GFI +   +S FI  Y + G + 
Sbjct: 296  QKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIH 355

Query: 1160 EVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALI 981
            E   +  EME   L P +  F  LI    + G+++ + ++ + M  R + PS   +  ++
Sbjct: 356  EAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMV 415

Query: 980  ASHYEKGDKKRALQLYKDMISDGLKPS 900
                E GD + A  L   ++  G  P+
Sbjct: 416  RGLCEIGDSENANALLTLVLDKGFLPN 442


>ref|XP_002305195.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222848159|gb|EEE85706.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 556

 Score =  493 bits (1268), Expect = e-136
 Identities = 242/378 (64%), Positives = 299/378 (79%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RM    FDVC  L +H F+L LI+FN L HVVQKS  +   W+IYE M+  RTYPNE TI
Sbjct: 177  RMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLAWKIYEHMLHRRTYPNEATI 236

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
             +M+SALCKEGKLQ  V++LD++HGKRC P+VIVNT L+FRI+EEGR+E G+ LLK ML+
Sbjct: 237  ESMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLR 296

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNMI+DTVA+SL+V+AK KLGN++SA +VYEEMLKRGF+ NSFVYTSFIGAYC+E RIEE
Sbjct: 297  KNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEE 356

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A+ L+QEME  GLKPYG+T++ L+ GCAK G++EE+L +C+KMME   VPS SAFNEMV 
Sbjct: 357  ANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVPSLSAFNEMVG 416

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LC  +D+  AN MLT LLD+GF+ DEITYS+ I+GY K  ++QE+LKLY+EMEYRSLSP
Sbjct: 417  KLCRIEDVTRANEMLTNLLDEGFLADEITYSNLISGYAKNNQIQEMLKLYYEMEYRSLSP 476

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
            G   FT LI  LC CGKLEEAEKYL+IM  RS+ P   +YEALI  ++EKGDK+RAL LY
Sbjct: 477  GLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRSLNPREDVYEALIKVYFEKGDKRRALNLY 536

Query: 932  KDMISDGLKPSWSNSGGA 879
             +M+S GLK   S+  GA
Sbjct: 537  NEMVSKGLKLCCSHYLGA 554



 Score =  109 bits (272), Expect = 5e-21
 Identities = 64/281 (22%), Positives = 129/281 (45%), Gaps = 5/281 (1%)
 Frame = -3

Query: 1739 VIVNTSLIFRIV-----EEGRIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSA 1575
            +I+++ L+F ++     ++   E G  +  R+ +    +  ++F+ ++H   K      A
Sbjct: 158  IIISSPLVFDLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLA 217

Query: 1574 WEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVG 1395
            W++YE ML R  + N     S I A C+EG+++    ++ ++ GK   P       L+  
Sbjct: 218  WKIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFR 277

Query: 1394 CAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPD 1215
              + G++E  L   + M+ + ++    A++ +V    +  +L  A  +   +L +GF  +
Sbjct: 278  ILEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNAN 337

Query: 1214 EITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLK 1035
               Y+ FI  Y K   ++E  +L  EME   L P    F  L+    + G++EE   Y K
Sbjct: 338  SFVYTSFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCK 397

Query: 1034 IMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDG 912
             M +    PS   +  ++       D  RA ++  +++ +G
Sbjct: 398  KMMEMGHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEG 438


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  474 bits (1221), Expect = e-131
 Identities = 234/378 (61%), Positives = 288/378 (76%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            R+    F +C YL +HGF L L++FN L HVVQKS     VW+IYE MI  R YPNE TI
Sbjct: 178  RLFEIGFKICFYLEEHGFFLSLLSFNTLIHVVQKSDQYPLVWKIYEHMIHKRIYPNEATI 237

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            RTM++ALCKEGKLQ FVD+LDR+HGKRC P+VI+N  ++FRI++EGR++ G+ +LK MLQ
Sbjct: 238  RTMINALCKEGKLQMFVDILDRIHGKRCRPLVIINACMVFRILQEGRVDVGIGILKGMLQ 297

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNMI+DTVA+SL+V AK +LGN+DSA EVYE MLKRGF+ NSFV+T  IGAYC  G+IE+
Sbjct: 298  KNMILDTVAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEK 357

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A+ L  EM   GL+PY ET++ LI GCAK G++EE L + EKM+ER +VPS  AFN+M+A
Sbjct: 358  ANQLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNKMIA 417

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCET ++  AN  LT LLDKGF PDE TYS+ + GY +  ++QEVLKLY+EMEYR LSP
Sbjct: 418  KLCETGEVNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEMEYRPLSP 477

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
            G  VFT LI SLC CGKLE+AEKYL+IMK RS+ PS  +YEALIA H EK D  RALQLY
Sbjct: 478  GLLVFTPLIRSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAGHLEKSDTARALQLY 537

Query: 932  KDMISDGLKPSWSNSGGA 879
             +MIS G  P  S + GA
Sbjct: 538  NEMISKGFTPCCSYNFGA 555



 Score = 86.7 bits (213), Expect = 4e-14
 Identities = 61/285 (21%), Positives = 119/285 (41%), Gaps = 5/285 (1%)
 Frame = -3

Query: 1739 VIVNTSLIFRIVEEGR-----IEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSA 1575
            +IV++ L+F ++ +        E G  +   + +    +  ++F+ ++H   K       
Sbjct: 159  IIVSSPLVFNLLVQAYAKLRLFEIGFKICFYLEEHGFFLSLLSFNTLIHVVQKSDQYPLV 218

Query: 1574 WEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVG 1395
            W++YE M+ +  + N     + I A C+EG+++    ++  + GK  +P           
Sbjct: 219  WKIYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRCRPL---------- 268

Query: 1394 CAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPD 1215
                                 I+ +C     MV  + +   + +  G+L  +L K  I D
Sbjct: 269  --------------------VIINAC-----MVFRILQEGRVDVGIGILKGMLQKNMILD 303

Query: 1214 EITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLK 1035
             + YS  +    ++G +   L++Y  M  R  +  + V T+LIG+ C  GK+E+A +   
Sbjct: 304  TVAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFG 363

Query: 1034 IMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDGLKPS 900
             M    + P    +  LI    + G  +  L  ++ MI  GL PS
Sbjct: 364  EMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPS 408


>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  460 bits (1184), Expect = e-127
 Identities = 219/367 (59%), Positives = 282/367 (76%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            R++  A  VC +L + GFSL LI+FN L HVV+KS  NL VW+IYE MI+ R YPN +T+
Sbjct: 173  RLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDQNLKVWKIYEQMIRKRVYPNAITV 232

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            R M+++LCKEGKLQ   D+L+R+HG RC   +IVN  LI+RI+EEGR+E+G+ LLKRMLQ
Sbjct: 233  RIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQ 292

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNM++D +A+SL+V+AK K G+I S WEV+EEM +RGF  NSF+YT FIG +CR G++EE
Sbjct: 293  KNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEE 352

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A CL+QEME  GLKPY ET++ LI GCA  G  EE L  CEKM+ER  +PSCS FN  +A
Sbjct: 353  AHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAIA 412

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             +CE  D+K AN +LT+LLDKGF+PDE TY++ I GY K GE+QE+LKLY+EM  R LSP
Sbjct: 413  KICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEMGARLLSP 472

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
            G SVF  LIGSLCQ G+LEEAEKYLKI+KD S+ P   IY+ALI  + +KG++ +AL+LY
Sbjct: 473  GVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALILFYLKKGNRAKALELY 532

Query: 932  KDMISDG 912
             +M+ DG
Sbjct: 533  NEMMFDG 539



 Score = 69.7 bits (169), Expect = 5e-09
 Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 55/309 (17%)
 Frame = -3

Query: 1655 QKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYT---SFIGAY---- 1497
            +KN      +F +++H   K   +  A  + E +LK+    NSF Y+   S + +Y    
Sbjct: 98   RKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKN-EGNSFDYSVVDSLMDSYEVTG 156

Query: 1496 ------------CREGR-IEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRF 1356
                        C + R I+ A C+   +E +G      +++TLI    K  +  +  + 
Sbjct: 157  SSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDQNLKVWKI 216

Query: 1355 CEKMMEREIVPSCSAFNEMVANLC------ETDDL------------------------- 1269
             E+M+ + + P+      M+ +LC      ET D+                         
Sbjct: 217  YEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILE 276

Query: 1268 --KLANG--MLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSV 1101
              ++ +G  +L  +L K  + D+I YS  +    K G +    +++ EM  R     + +
Sbjct: 277  EGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFI 336

Query: 1100 FTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMI 921
            +TL IG  C+ GK+EEA   ++ M++  + P    +  LI      G  +  L + + M+
Sbjct: 337  YTLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKML 396

Query: 920  SDGLKPSWS 894
              G  PS S
Sbjct: 397  ERGFLPSCS 405


>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cucumis sativus]
          Length = 517

 Score =  458 bits (1178), Expect = e-126
 Identities = 218/367 (59%), Positives = 281/367 (76%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            R++  A  VC +L + GFSL LI+FN L HVV+KS  NL VW+IYE MI+ R YPN +T+
Sbjct: 151  RLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENLKVWKIYEQMIRKRVYPNAITV 210

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            R M+++LCKEGKLQ   D+L+R+HG RC   +IVN  LI+RI+EEGR+E+G+ LLKRMLQ
Sbjct: 211  RIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQ 270

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNM++D +A+SL+V+AK K G+I S WEV+EEM +RGF  NSF+YT FIG +CR G++EE
Sbjct: 271  KNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEE 330

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A CL+QEME  GLKPY ET++ LI GCA  G  EE L  CEKM+ER  +PSCS FN  + 
Sbjct: 331  AHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAID 390

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             +CE  D+K AN +LT+LLDKGF+PDE TY++ I GY K GE+QE+LKLY+EM  R LSP
Sbjct: 391  KICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEMGARLLSP 450

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
            G SVF  LIGSLCQ G+LEEAEKYLKI+KD S+ P   IY+ALI  + +KG++ +AL+LY
Sbjct: 451  GVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALILLYLKKGNRAKALELY 510

Query: 932  KDMISDG 912
             +M+ DG
Sbjct: 511  NEMMFDG 517



 Score = 69.7 bits (169), Expect = 5e-09
 Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 55/309 (17%)
 Frame = -3

Query: 1655 QKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYT---SFIGAY---- 1497
            +KN      +F +++H   K   +  A  + E +LK+    NSF Y+   S + +Y    
Sbjct: 76   RKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKN-EGNSFDYSVVDSLMDSYEVTG 134

Query: 1496 ------------CREGR-IEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRF 1356
                        C + R I+ A C+   +E +G      +++TLI    K  +  +  + 
Sbjct: 135  SSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENLKVWKI 194

Query: 1355 CEKMMEREIVPSCSAFNEMVANLC------ETDDL------------------------- 1269
             E+M+ + + P+      M+ +LC      ET D+                         
Sbjct: 195  YEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILE 254

Query: 1268 --KLANG--MLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSV 1101
              ++ +G  +L  +L K  + D+I YS  +    K G +    +++ EM  R     + +
Sbjct: 255  EGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFI 314

Query: 1100 FTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMI 921
            +TL IG  C+ GK+EEA   ++ M++  + P    +  LI      G  +  L + + M+
Sbjct: 315  YTLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKML 374

Query: 920  SDGLKPSWS 894
              G  PS S
Sbjct: 375  ERGFLPSCS 383


>ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, partial [Prunus persica]
            gi|462410396|gb|EMJ15730.1| hypothetical protein
            PRUPE_ppa014874mg, partial [Prunus persica]
          Length = 499

 Score =  450 bits (1158), Expect = e-123
 Identities = 214/335 (63%), Positives = 263/335 (78%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RM  T FDVC YL +HG  L LIT+N L HVVQKS     VW+IYE M+  R YPNE TI
Sbjct: 165  RMFETGFDVCCYLGEHGLPLSLITYNTLLHVVQKSDQTALVWKIYEHMVGKRNYPNEETI 224

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            + ++ ALCKEGKL++ VD+LDR+HGKRC P VIVNTSL+F I+E GR+EEG++LL+RMLQ
Sbjct: 225  KILIDALCKEGKLKKCVDMLDRIHGKRCSPSVIVNTSLVFSILEGGRVEEGLMLLRRMLQ 284

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNM++DT+A+SL+V+AK KLG++ SAWEVYEEMLKRGF  NSFVYT F+GA+C EGR+EE
Sbjct: 285  KNMVLDTIAYSLIVYAKVKLGDVCSAWEVYEEMLKRGFRANSFVYTLFMGAHCEEGRMEE 344

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A  ++ EME   LKP+ E+Y+ LI GCAK G++E SL + +KM+E   +P  SAFNEMV 
Sbjct: 345  AQGMMNEMENMDLKPFDESYNLLIEGCAKAGRVEASLSYLKKMVESGFIPCRSAFNEMVG 404

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCET D + AN M T+LLDKGF+PD  TY H I GYG+ GE+QEV+KLY+EME RSLSP
Sbjct: 405  KLCETGDAEQANTMFTILLDKGFLPDSTTYGHLIDGYGRKGEIQEVVKLYYEMESRSLSP 464

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAP 1008
            G  VFT +I S CQCGK+EEAE+Y  IMKDRSIAP
Sbjct: 465  GALVFTSVIKSFCQCGKVEEAERYFGIMKDRSIAP 499



 Score =  102 bits (253), Expect = 9e-19
 Identities = 56/252 (22%), Positives = 118/252 (46%)
 Frame = -3

Query: 1640 IDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCL 1461
            +  + ++ ++H   K       W++YE M+ +  + N       I A C+EG++++   +
Sbjct: 184  LSLITYNTLLHVVQKSDQTALVWKIYEHMVGKRNYPNEETIKILIDALCKEGKLKKCVDM 243

Query: 1460 IQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCE 1281
            +  + GK   P      +L+    +GG++EE L    +M+++ +V    A++ +V    +
Sbjct: 244  LDRIHGKRCSPSVIVNTSLVFSILEGGRVEEGLMLLRRMLQKNMVLDTIAYSLIVYAKVK 303

Query: 1280 TDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSV 1101
              D+  A  +   +L +GF  +   Y+ F+  + + G ++E   +  EME   L P +  
Sbjct: 304  LGDVCSAWEVYEEMLKRGFRANSFVYTLFMGAHCEEGRMEEAQGMMNEMENMDLKPFDES 363

Query: 1100 FTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMI 921
            + LLI    + G++E +  YLK M +    P    +  ++    E GD ++A  ++  ++
Sbjct: 364  YNLLIEGCAKAGRVEASLSYLKKMVESGFIPCRSAFNEMVGKLCETGDAEQANTMFTILL 423

Query: 920  SDGLKPSWSNSG 885
              G  P  +  G
Sbjct: 424  DKGFLPDSTTYG 435


>ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citrus clementina]
            gi|557532668|gb|ESR43851.1| hypothetical protein
            CICLE_v10011485mg [Citrus clementina]
          Length = 521

 Score =  449 bits (1156), Expect = e-123
 Identities = 225/373 (60%), Positives = 275/373 (73%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            R+   AFDVCRYL + GFSL LI+FN L HVV KS  N                      
Sbjct: 171  RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRN---------------------- 208

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
                        LQ +VD+LDR+HGKRC PMVIVNTSLI RI++E RIEEGMVLLKRML+
Sbjct: 209  ----------DLLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 258

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNMI DT+A+SL+V+AK K+ N++SA  VYEEMLKRGF  NSFVYT+FIGAYC  G+IEE
Sbjct: 259  KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 318

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A+CL+QEME  GLKPY ET++ LI GCAK  ++EESL +CE+MM R+++PSCSAFNEM+ 
Sbjct: 319  ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 378

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE  ++K ANGMLT+ LDKGF P+E+TYSH I GY K GE+QEVLKLY+EMEY+S+SP
Sbjct: 379  RLCECGNVKQANGMLTLALDKGFSPNEMTYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 438

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
                +T LI SLCQCGKLEEA+KY KIMK  S+ P   IYE+L+  H EKG+K +AL L 
Sbjct: 439  TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKVKALHLC 498

Query: 932  KDMISDGLKPSWS 894
            ++M+S+GLKPS S
Sbjct: 499  EEMVSEGLKPSTS 511


>ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 530

 Score =  449 bits (1156), Expect = e-123
 Identities = 217/356 (60%), Positives = 274/356 (76%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RM  T FDVC YL + G  L LI++N L  VV++S  N  VW+IYE M+  R+YPNE T+
Sbjct: 163  RMFETGFDVCCYLRERGLPLSLISYNTLLRVVERSERNALVWKIYEHMVGRRSYPNEETV 222

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            R ++ ALCKEG+L+++ D+LDR+HGKRC P VIVNTSL+FRI+EEGR+EEGMVLLKRMLQ
Sbjct: 223  RILIDALCKEGELRKYADMLDRIHGKRCSPSVIVNTSLVFRILEEGRVEEGMVLLKRMLQ 282

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNM++DT+A+SL+V+AK KL ++ SA +VYEEMLKRGF  NSFVYT FI A+C+ GRI+E
Sbjct: 283  KNMVLDTIAYSLIVYAKVKLEDLGSAQQVYEEMLKRGFRANSFVYTLFIEAHCKAGRIDE 342

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A  ++ EM    LKPY E+Y+ LI GCAK G++EES+ + ++MME   +PS  AFNEMV 
Sbjct: 343  AQSMMNEMGNMDLKPYDESYNFLIEGCAKAGRVEESVNYMKQMMEIRFIPSLGAFNEMVG 402

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE  D   AN MLT+LLDKGF P+EITYS  I GY + G+  EVLKL++EME RSLSP
Sbjct: 403  KLCEIGDADQANVMLTILLDKGFSPNEITYSLLIDGYARKGKSDEVLKLFYEMESRSLSP 462

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRA 945
            G  VFT LI S CQCGK EEA+KY +IMKDRSIAPS   YE  +A+H+E+G+ +RA
Sbjct: 463  GMLVFTSLIKSFCQCGKSEEAKKYFRIMKDRSIAPSISTYEIFLANHFEQGNTERA 518



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 56/263 (21%), Positives = 121/263 (46%)
 Frame = -3

Query: 1688 EEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSF 1509
            E G  +   + ++ + +  ++++ ++    +       W++YE M+ R  + N       
Sbjct: 166  ETGFDVCCYLRERGLPLSLISYNTLLRVVERSERNALVWKIYEHMVGRRSYPNEETVRIL 225

Query: 1508 IGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREI 1329
            I A C+EG + + + ++  + GK   P      +L+    + G++EE +   ++M+++ +
Sbjct: 226  IDALCKEGELRKYADMLDRIHGKRCSPSVIVNTSLVFRILEEGRVEEGMVLLKRMLQKNM 285

Query: 1328 VPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLK 1149
            V    A++ +V    + +DL  A  +   +L +GF  +   Y+ FI  + K G + E   
Sbjct: 286  VLDTIAYSLIVYAKVKLEDLGSAQQVYEEMLKRGFRANSFVYTLFIEAHCKAGRIDEAQS 345

Query: 1148 LYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHY 969
            +  EM    L P +  +  LI    + G++EE+  Y+K M +    PS   +  ++    
Sbjct: 346  MMNEMGNMDLKPYDESYNFLIEGCAKAGRVEESVNYMKQMMEIRFIPSLGAFNEMVGKLC 405

Query: 968  EKGDKKRALQLYKDMISDGLKPS 900
            E GD  +A  +   ++  G  P+
Sbjct: 406  EIGDADQANVMLTILLDKGFSPN 428



 Score = 92.0 bits (227), Expect = 9e-16
 Identities = 59/240 (24%), Positives = 110/240 (45%)
 Frame = -3

Query: 1976 LIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSALCKEGK 1797
            +++    L  I ++++ +   K        ++YE M++     N       + A CK G+
Sbjct: 280  MLQKNMVLDTIAYSLIVYAKVKLEDLGSAQQVYEEMLKRGFRANSFVYTLFIEAHCKAGR 339

Query: 1796 LQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMIIDTVAFSL 1617
            +     +++ +      P       LI    + GR+EE +  +K+M++   I    AF+ 
Sbjct: 340  IDEAQSMMNEMGNMDLKPYDESYNFLIEGCAKAGRVEESVNYMKQMMEIRFIPSLGAFNE 399

Query: 1616 VVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKG 1437
            +V    ++G+ D A  +   +L +GF  N   Y+  I  Y R+G+ +E   L  EME + 
Sbjct: 400  MVGKLCEIGDADQANVMLTILLDKGFSPNEITYSLLIDGYARKGKSDEVLKLFYEMESRS 459

Query: 1436 LKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLAN 1257
            L P    + +LI    + GK EE+ ++   M +R I PS S +   +AN  E  + + A+
Sbjct: 460  LSPGMLVFTSLIKSFCQCGKSEEAKKYFRIMKDRSIAPSISTYEIFLANHFEQGNTERAD 519


>ref|XP_007022701.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
            [Theobroma cacao] gi|508722329|gb|EOY14226.1|
            Pentatricopeptide repeat superfamily protein, putative
            isoform 2 [Theobroma cacao]
          Length = 549

 Score =  438 bits (1126), Expect = e-120
 Identities = 207/326 (63%), Positives = 260/326 (79%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RML  AF+VC YL  HGFSL L++FN L H + KS  N+ VW++YE MI+ R YPNE+TI
Sbjct: 177  RMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITI 236

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            RTM+SALCKEGKLQ  VD+LD++ GKRC P+VIVNT L+F+++EEGRIE+GM LLKRMLQ
Sbjct: 237  RTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQ 296

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KN+I+D++A+S VVH K KLGN++ AWEV+EEMLKRGF  NSF+++SFI AY   GRI E
Sbjct: 297  KNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHE 356

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A  +++EME  GLKPY ET++ LI GCAK G+++ S+R CE+M+ R +VPSCS FNEMV 
Sbjct: 357  AENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVR 416

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE  D + AN +LT++LDKGF+P+E TYSH IAGYGK G +Q+V KLY+EMEY+SLSP
Sbjct: 417  GLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSP 476

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLK 1035
            G  VFT LI  LC CGKLEEAE+  K
Sbjct: 477  GLPVFTSLIRCLCHCGKLEEAERVTK 502



 Score =  107 bits (267), Expect = 2e-20
 Identities = 62/285 (21%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
 Frame = -3

Query: 1739 VIVNTSLIFRIVEEG-----RIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSA 1575
            V+ +++L+F ++ +       +E+   +   +      +  ++F+ ++H   K G     
Sbjct: 158  VVGSSTLVFDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMV 217

Query: 1574 WEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVG 1395
            W+VYE M+++  + N     + I A C+EG+++    L+ ++ GK   P       L+  
Sbjct: 218  WKVYEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFK 277

Query: 1394 CAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPD 1215
              + G++E+ +   ++M+++ ++    A++ +V    +  +L+LA  +   +L +GFI +
Sbjct: 278  VIEEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIAN 337

Query: 1214 EITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLK 1035
               +S FI  Y + G + E   +  EME   L P +  F  LI    + G+++ + ++ +
Sbjct: 338  SFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCE 397

Query: 1034 IMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDGLKPS 900
             M  R + PS   +  ++    E GD + A  L   ++  G  P+
Sbjct: 398  EMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPN 442



 Score = 75.1 bits (183), Expect = 1e-10
 Identities = 48/225 (21%), Positives = 101/225 (44%)
 Frame = -3

Query: 2006 LHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRT 1827
            +    ++ + +++    L  I ++ + H   K  +    WE++E M++     N     +
Sbjct: 284  IEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSS 343

Query: 1826 MVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKN 1647
             + A  + G++    +VL  +      P       LI    + G ++  +   + M+++ 
Sbjct: 344  FIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRG 403

Query: 1646 MIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEAS 1467
            ++     F+ +V    ++G+ ++A  +   +L +GF  N   Y+  I  Y +EG I++  
Sbjct: 404  LVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVF 463

Query: 1466 CLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMERE 1332
             L  EME K L P    + +LI      GKLEE+ R  ++ + R+
Sbjct: 464  KLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERVTKQGLVRD 508


>ref|XP_007022704.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            5 [Theobroma cacao] gi|508722332|gb|EOY14229.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 5 [Theobroma cacao]
          Length = 504

 Score =  437 bits (1125), Expect = e-120
 Identities = 206/326 (63%), Positives = 261/326 (80%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RML  AF+VC YL  HGFSL L++FN L H + KS  N+ VW++YE MI+ R YPNE+TI
Sbjct: 177  RMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITI 236

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            RTM+SALCKEGKLQ  VD+LD++ GKRC P+VIVNT L+F+++EEGRIE+GM LLKRMLQ
Sbjct: 237  RTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQ 296

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KN+I+D++A+S VVH K KLGN++ AWEV+EEMLKRGF  NSF+++SFI AY   GRI E
Sbjct: 297  KNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHE 356

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A  +++EME  GLKPY ET++ LI GCAK G+++ S+R CE+M+ R +VPSCS FNEMV 
Sbjct: 357  AENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVR 416

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE  D + AN +LT++LDKGF+P+E TYSH IAGYGK G +Q+V KLY+EMEY+SLSP
Sbjct: 417  GLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSP 476

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLK 1035
            G  VFT LI  LC CGKLEEAE+ ++
Sbjct: 477  GLPVFTSLIRCLCHCGKLEEAERVMQ 502



 Score =  107 bits (267), Expect = 2e-20
 Identities = 62/285 (21%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
 Frame = -3

Query: 1739 VIVNTSLIFRIVEEG-----RIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSA 1575
            V+ +++L+F ++ +       +E+   +   +      +  ++F+ ++H   K G     
Sbjct: 158  VVGSSTLVFDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMV 217

Query: 1574 WEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVG 1395
            W+VYE M+++  + N     + I A C+EG+++    L+ ++ GK   P       L+  
Sbjct: 218  WKVYEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFK 277

Query: 1394 CAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPD 1215
              + G++E+ +   ++M+++ ++    A++ +V    +  +L+LA  +   +L +GFI +
Sbjct: 278  VIEEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIAN 337

Query: 1214 EITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLK 1035
               +S FI  Y + G + E   +  EME   L P +  F  LI    + G+++ + ++ +
Sbjct: 338  SFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCE 397

Query: 1034 IMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDGLKPS 900
             M  R + PS   +  ++    E GD + A  L   ++  G  P+
Sbjct: 398  EMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPN 442



 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 49/224 (21%), Positives = 101/224 (45%)
 Frame = -3

Query: 2006 LHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRT 1827
            +    ++ + +++    L  I ++ + H   K  +    WE++E M++     N     +
Sbjct: 284  IEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSS 343

Query: 1826 MVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKN 1647
             + A  + G++    +VL  +      P       LI    + G ++  +   + M+++ 
Sbjct: 344  FIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRG 403

Query: 1646 MIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEAS 1467
            ++     F+ +V    ++G+ ++A  +   +L +GF  N   Y+  I  Y +EG I++  
Sbjct: 404  LVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVF 463

Query: 1466 CLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMER 1335
             L  EME K L P    + +LI      GKLEE+    E++M+R
Sbjct: 464  KLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEA----ERVMQR 503


>gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]
          Length = 829

 Score =  430 bits (1105), Expect = e-117
 Identities = 206/323 (63%), Positives = 259/323 (80%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RM  + FDVC YL +HGFSL L++FN   HVV+KS  N  VW IYE MI  R YPN+ TI
Sbjct: 345  RMFDSGFDVCCYLEEHGFSLNLVSFNTFIHVVEKSDENTMVWRIYEHMIWRRIYPNQSTI 404

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            RT++S+LCKEGKLQ++V++LDR+HG+RC P VIVNTSL+F+I EEGR+EEG+VLLKRMLQ
Sbjct: 405  RTLISSLCKEGKLQKYVEMLDRIHGRRCSPSVIVNTSLVFKIFEEGRVEEGVVLLKRMLQ 464

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            +NM+ DT+A+SL+V+AK KLGNI SA +VYEEMLKRGF  N FVYT FI AYC+EGRI+E
Sbjct: 465  RNMLFDTIAYSLIVYAKLKLGNIVSAQDVYEEMLKRGFRANPFVYTLFIRAYCKEGRIDE 524

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
              C++++ME  GLKPY ETY++L+   AK G+LEESLR CE MME+  VPSC+AFNEMV 
Sbjct: 525  THCMMKDMEDMGLKPYEETYNSLVECYAKAGRLEESLRNCEVMMEKGFVPSCAAFNEMVH 584

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             LCE  + + AN MLT LL+KGF P++ITY+  I GY K G+V+EVLKL++EM  +S+SP
Sbjct: 585  KLCENGEAEKANAMLTRLLEKGFSPNDITYASLIVGYEKKGDVEEVLKLFYEMVSKSISP 644

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEK 1044
            G+ VFT LI SLC+ GKLE+AEK
Sbjct: 645  GSLVFTTLIKSLCRSGKLEQAEK 667


>ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Solanum lycopersicum]
          Length = 552

 Score =  418 bits (1075), Expect = e-114
 Identities = 198/361 (54%), Positives = 272/361 (75%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RM+    DVC+ L  +GF L LI++N L HVVQKS     VW IYE+MI+ R YPNE+T 
Sbjct: 182  RMIDKGLDVCKLLDGNGFMLSLISYNTLLHVVQKSEKTSMVWGIYEYMIEKRIYPNEMTT 241

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            R M+SALCK+G+LQRF+DVL++ HGKRC P V+VNT LI+ ++EEGRIE+G+ L++RMLQ
Sbjct: 242  RIMISALCKQGRLQRFLDVLEKSHGKRCRPGVVVNTCLIYGMIEEGRIEDGLRLMRRMLQ 301

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNMI+DT++ SL+V AK K+ +++SAW VY+EML+RGF  N+ VY SFIGAYC E RI+E
Sbjct: 302  KNMILDTISCSLIVLAKVKMRDLESAWGVYDEMLRRGFEGNALVYDSFIGAYCEEKRIDE 361

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A  L+ EME   +KP+ ET++ LI  C++ G+LEESL+ C+KM+   ++PSC +FN +VA
Sbjct: 362  AIKLMDEMECLNMKPFSETFNHLIKVCSEVGRLEESLKICDKMIGNGLLPSCLSFNALVA 421

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             L E    K AN +LT L+DKGFIPD+  YS+ I GY  VG+V+  LKLY+EM+YRS+SP
Sbjct: 422  KLSENGSAKCANKLLTTLMDKGFIPDQSIYSYLIVGYANVGDVEGALKLYYEMQYRSISP 481

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
              S+F  LI +LC+CG+L+EA+++L +M  +S+ PS  +Y+ LIA H E+GD+ RA  LY
Sbjct: 482  NTSIFDYLIIALCECGRLKEADEFLSLMIGQSLRPSIHVYKKLIARHLERGDETRANHLY 541

Query: 932  K 930
            +
Sbjct: 542  R 542



 Score =  116 bits (290), Expect = 4e-23
 Identities = 67/266 (25%), Positives = 129/266 (48%)
 Frame = -3

Query: 1691 IEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTS 1512
            I++G+ + K +     ++  ++++ ++H   K       W +YE M+++  + N      
Sbjct: 184  IDKGLDVCKLLDGNGFMLSLISYNTLLHVVQKSEKTSMVWGIYEYMIEKRIYPNEMTTRI 243

Query: 1511 FIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMERE 1332
             I A C++GR++    ++++  GK  +P       LI G  + G++E+ LR   +M+++ 
Sbjct: 244  MISALCKQGRLQRFLDVLEKSHGKRCRPGVVVNTCLIYGMIEEGRIEDGLRLMRRMLQKN 303

Query: 1331 IVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVL 1152
            ++    + + +V    +  DL+ A G+   +L +GF  + + Y  FI  Y +   + E +
Sbjct: 304  MILDTISCSLIVLAKVKMRDLESAWGVYDEMLRRGFEGNALVYDSFIGAYCEEKRIDEAI 363

Query: 1151 KLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASH 972
            KL  EME  ++ P +  F  LI    + G+LEE+ K    M    + PS   + AL+A  
Sbjct: 364  KLMDEMECLNMKPFSETFNHLIKVCSEVGRLEESLKICDKMIGNGLLPSCLSFNALVAKL 423

Query: 971  YEKGDKKRALQLYKDMISDGLKPSWS 894
             E G  K A +L   ++  G  P  S
Sbjct: 424  SENGSAKCANKLLTTLMDKGFIPDQS 449


>gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus guttatus]
          Length = 541

 Score =  410 bits (1054), Expect = e-111
 Identities = 201/369 (54%), Positives = 268/369 (72%), Gaps = 2/369 (0%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            RM+    D C+ L +H F L +I+FN + HV+ KS  +  VW +YE MI  R  PNE+T 
Sbjct: 173  RMVDDILDACKLLSRHDFPLSVISFNTILHVMIKSEKSRLVWSVYEHMISERMCPNEMTT 232

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCP-PMVIVNTSLIFRIVEEGRIEEGMVLLKRML 1656
            R MVSALCKEGKL+RF+ ++DR+HGKRC  P +IVNT L++ ++EE +IEEG+VLLKR+L
Sbjct: 233  RIMVSALCKEGKLERFLRIVDRMHGKRCSIPRLIVNTCLVYGMIEEDKIEEGLVLLKRIL 292

Query: 1655 QKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIE 1476
            QK MI+DT+++SLV+ AK K+GN+D+A E+YEEMLKRGF EN FV + FIGAYC EGRI+
Sbjct: 293  QKAMILDTISYSLVIFAKVKMGNLDNAKEIYEEMLKRGFEENVFVCSLFIGAYCEEGRID 352

Query: 1475 EASCLIQEMEGKGLKPYGETYDTLIVGCAKG-GKLEESLRFCEKMMEREIVPSCSAFNEM 1299
            EA  L +EME  GLKP+ ET++ LI GC+   G+ E+ + FC+KMM   +VPSCS+ NEM
Sbjct: 353  EAVGLFEEMESLGLKPFDETFNHLIKGCSSSYGRFEDGVVFCKKMMSMGLVPSCSSVNEM 412

Query: 1298 VANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSL 1119
               LCE    K A+ +LT+LLDKGF+ DE TYSH + GYGK  +V+ + KL FEMEYRS+
Sbjct: 413  FGKLCENAKTKEADEILTILLDKGFVADENTYSHLVCGYGKEDDVEGLTKLLFEMEYRSI 472

Query: 1118 SPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQ 939
            SP    F+ +I S C  G+L++AEKYL +MK RS  PS  +YE LI+ H + G++ RA Q
Sbjct: 473  SPNALGFSSVIVSFCNHGRLKDAEKYLGLMKSRSFIPSPNVYERLISGHLQNGNETRARQ 532

Query: 938  LYKDMISDG 912
            LY +M+  G
Sbjct: 533  LYGEMVGIG 541


>ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cicer arietinum]
            gi|502183720|ref|XP_004517198.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cicer arietinum]
          Length = 551

 Score =  403 bits (1036), Expect = e-109
 Identities = 206/376 (54%), Positives = 275/376 (73%), Gaps = 11/376 (2%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            R+   AF VCR + + GF + L +FN L +V QK +    VW++Y +MI  R YPN VT+
Sbjct: 170  RLTDVAFAVCRCVEECGFCVSLSSFNALLYVAQKGNRFSTVWDVYGYMIGKRIYPNVVTL 229

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCP--PMVIVNTSLIFRIVEEGRIEEGMV----- 1674
            R M+ ALCKEG LQR VD LD++ GKR    P VIVN SLI R++E+G +EE  V     
Sbjct: 230  RIMIDALCKEGLLQRNVDALDQIIGKRNSHSPSVIVNLSLILRMLEKGNVEEEDVDNELV 289

Query: 1673 ----LLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFI 1506
                LLKR+LQKN+I D+VA+SL+VH K +LGN+DSA E+YEEM++RGF+ENSFV+TSFI
Sbjct: 290  KLVTLLKRLLQKNLIGDSVAYSLIVHVKIRLGNLDSALEIYEEMVRRGFNENSFVHTSFI 349

Query: 1505 GAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIV 1326
              +C +GRI++A  L++EME KGL+PYGET++ +IVGCA  G+L++   + E+M+    V
Sbjct: 350  RVFCGKGRIDKAIELMKEMEAKGLRPYGETFECVIVGCADSGRLKDCSSYFEEMLCAGFV 409

Query: 1325 PSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKL 1146
            PSCS+F++MVA LCE  D++ AN  LTVLLDKGF+P + TYSH I GY    EVQEVLK+
Sbjct: 410  PSCSSFDKMVAKLCENGDVEKANDFLTVLLDKGFLPSDETYSHLIYGYAIKDEVQEVLKI 469

Query: 1145 YFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYE 966
            Y+EMEY+S+ PG SV++ +I  LC+ GKLE++EKYL+IMK RS+ P+  IYE LIA H +
Sbjct: 470  YYEMEYKSMCPGLSVYSSMIKCLCRFGKLEDSEKYLRIMKGRSLVPNVNIYETLIACHVQ 529

Query: 965  KGDKKRALQLYKDMIS 918
            KG+  RALQL  +M S
Sbjct: 530  KGNNDRALQLRNEMAS 545



 Score = 79.7 bits (195), Expect = 5e-12
 Identities = 67/368 (18%), Positives = 154/368 (41%), Gaps = 12/368 (3%)
 Frame = -3

Query: 1967 HGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSALCKEGKLQR 1788
            H F   L +++I  H++ ++        + E ++   T  +  T+R ++ +         
Sbjct: 95   HSFQHGLRSYSITIHLLLQAGLITDANALLESLVNKHTKTH--TVRAIIDS--------- 143

Query: 1787 FVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQK-NMIIDTVAFSLVV 1611
            F++  + V G   P        L+ +   + R+ +    + R +++    +   +F+ ++
Sbjct: 144  FINTSESVSGSHLPVF-----DLLVKAYAKARLTDVAFAVCRCVEECGFCVSLSSFNALL 198

Query: 1610 HAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGK--G 1437
            +   K     + W+VY  M+ +  + N       I A C+EG ++     + ++ GK   
Sbjct: 199  YVAQKGNRFSTVWDVYGYMIGKRIYPNVVTLRIMIDALCKEGLLQRNVDALDQIIGKRNS 258

Query: 1436 LKPYGETYDTLIVGCAKGGKLEES---------LRFCEKMMEREIVPSCSAFNEMVANLC 1284
              P      +LI+   + G +EE          +   ++++++ ++    A++ +V    
Sbjct: 259  HSPSVIVNLSLILRMLEKGNVEEEDVDNELVKLVTLLKRLLQKNLIGDSVAYSLIVHVKI 318

Query: 1283 ETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNS 1104
               +L  A  +   ++ +GF  +   ++ FI  +   G + + ++L  EME + L P   
Sbjct: 319  RLGNLDSALEIYEEMVRRGFNENSFVHTSFIRVFCGKGRIDKAIELMKEMEAKGLRPYGE 378

Query: 1103 VFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDM 924
             F  +I      G+L++   Y + M      PS   ++ ++A   E GD ++A      +
Sbjct: 379  TFECVIVGCADSGRLKDCSSYFEEMLCAGFVPSCSSFDKMVAKLCENGDVEKANDFLTVL 438

Query: 923  ISDGLKPS 900
            +  G  PS
Sbjct: 439  LDKGFLPS 446


>ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297332864|gb|EFH63282.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 539

 Score =  395 bits (1014), Expect = e-107
 Identities = 192/364 (52%), Positives = 257/364 (70%)
 Frame = -3

Query: 2012 RMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTI 1833
            R L   F+V + L   GFSL +IT N L H   KS+    VW IYEF I  R YPNE TI
Sbjct: 172  RYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRIYEFAIDKRIYPNETTI 231

Query: 1832 RTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQ 1653
            R M+S LCKEG+L+  VD+LDR++GKRC P VIVNTSL+FR++EE R+EE M LLKR+L 
Sbjct: 232  RIMISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLEEKRVEESMSLLKRLLM 291

Query: 1652 KNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEE 1473
            KNM++D + +S+VV+AK K G+++ A  V++EM++RGF  N+FVYT+F+   C  G +EE
Sbjct: 292  KNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTAFVRVCCERGDVEE 351

Query: 1472 ASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVA 1293
            A  L+ EME  G+ PY ET++ LIVGCA+ G+ E+ L +CE M+ R ++PSCSAFN MV 
Sbjct: 352  AERLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVARGLMPSCSAFNGMVK 411

Query: 1292 NLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSP 1113
             L E D++  AN +LT  +DKGF+PDE TYSH I G+ +   + + LKL++EMEYR +SP
Sbjct: 412  RLSEIDNVNRANEILTKSIDKGFVPDEHTYSHLIRGFVEGNSIDQALKLFYEMEYRKISP 471

Query: 1112 GNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLY 933
            G  VF  LI  LC CGK+E  EKYL+IMK R I P++ IYEA+I +  + GDK  A ++Y
Sbjct: 472  GFEVFRSLIVGLCACGKVEAGEKYLRIMKRRLIEPNADIYEAMINAFQKIGDKTNADKVY 531

Query: 932  KDMI 921
             +MI
Sbjct: 532  NEMI 535



 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 59/250 (23%), Positives = 114/250 (45%)
 Frame = -3

Query: 1631 VAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQE 1452
            + F L+V   AK+  ++  +EV++ +   GF  +     + I    +  R++    + + 
Sbjct: 159  LVFDLLVQCYAKIRYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRIYEF 218

Query: 1451 MEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDD 1272
               K + P   T   +I    K G+L+E +   +++  +  +PS      +V  + E   
Sbjct: 219  AIDKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLEEKR 278

Query: 1271 LKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTL 1092
            ++ +  +L  LL K  + D I YS  +    K G+++    ++ EM  R  S    V+T 
Sbjct: 279  VEESMSLLKRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTA 338

Query: 1091 LIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDG 912
             +   C+ G +EEAE+ +  M+D  + P    +  LI      G +++ L+  + M++ G
Sbjct: 339  FVRVCCERGDVEEAERLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVARG 398

Query: 911  LKPSWSNSGG 882
            L PS S   G
Sbjct: 399  LMPSCSAFNG 408