BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00009373
         (628 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   356   4e-96
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   347   2e-93
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   346   3e-93
ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   341   9e-92
emb|CBI26820.3| unnamed protein product [Vitis vinifera]              337   2e-90
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   337   2e-90
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   335   5e-90
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun...   335   9e-90
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       334   1e-89
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps...   334   1e-89
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr...   333   2e-89
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   331   9e-89
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   330   2e-88
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      330   2e-88
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       330   2e-88
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...   330   3e-88
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   330   3e-88
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   329   4e-88
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   329   4e-88
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...   329   4e-88

>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  356 bits (913), Expect = 4e-96
 Identities = 171/207 (82%), Positives = 187/207 (90%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            ELIPP+Q  PMDYTPA SMQLDHDV IE+VEEYF NYIVNDSLGIIANAHTVFADREP K
Sbjct: 831  ELIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHK 890

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            A S+PCL+LA+ FSIAVDFPKTGVPAEIPP+L+ KEYPDFMEKPDKPTY S NVIGKLFR
Sbjct: 891  ARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFR 950

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
             VKDIAPHTS IR FT +VARRSYDPDMEV+GFE++IDDA YHK NYDYKLGNL+DYYGI
Sbjct: 951  AVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGI 1010

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+EAEIL+G+IMKMSKSF +RRD E I
Sbjct: 1011 KTEAEILTGSIMKMSKSFTKRRDAEAI 1037


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score =  347 bits (890), Expect = 2e-93
 Identities = 164/208 (78%), Positives = 186/208 (89%)
 Frame = +3

Query: 3    PELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPT 182
            PELIPP+Q +PMDYTPAP +++D DVTIEEVEEYF NYIVNDSLGIIANAHTVFAD +  
Sbjct: 815  PELIPPKQIQPMDYTPAPPIEMDQDVTIEEVEEYFVNYIVNDSLGIIANAHTVFADSKLD 874

Query: 183  KAMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLF 362
            KAMS PCL+LAKLFSIAVDFPKTGVPAEIPP L+AKEYPDFMEKPDK TY+S NVIG+LF
Sbjct: 875  KAMSHPCLQLAKLFSIAVDFPKTGVPAEIPPELYAKEYPDFMEKPDKRTYISHNVIGQLF 934

Query: 363  REVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYG 542
            REVKDIAPH SSI +FT  VA + YDPDMEV+GFE+Y++DAFYHK NYDYKLGN+LDYYG
Sbjct: 935  REVKDIAPHDSSIASFTRQVATKCYDPDMEVDGFEDYLEDAFYHKGNYDYKLGNMLDYYG 994

Query: 543  IKSEAEILSGNIMKMSKSFNRRRDTETI 626
            IK+EAEILSG+IM +SKSF +RRD + I
Sbjct: 995  IKTEAEILSGSIMTLSKSFTKRRDADAI 1022


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  346 bits (888), Expect = 3e-93
 Identities = 165/208 (79%), Positives = 186/208 (89%)
 Frame = +3

Query: 3    PELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPT 182
            PELIP +Q  PMDYTP P +QLDHDVTIEEVEEYF NYIVNDSLG+IANAHT  AD+E  
Sbjct: 826  PELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKESL 885

Query: 183  KAMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLF 362
            KAMS+PC+ELA+ FSIAVDFPKTGVPAEIP NL A+EYPDFMEKPDKP+Y S NVIGKLF
Sbjct: 886  KAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKLF 945

Query: 363  REVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYG 542
            REVKDIAP TSSIR+FT DVAR+ YDPDMEV+GFE+YIDDAFY+KSNYDYKLGNL++YYG
Sbjct: 946  REVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYG 1005

Query: 543  IKSEAEILSGNIMKMSKSFNRRRDTETI 626
            IK+EAE+LSG+ MKMSKSF ++RD E I
Sbjct: 1006 IKTEAELLSGSFMKMSKSFTKKRDAEAI 1033


>ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 292

 Score =  341 bits (875), Expect = 9e-92
 Identities = 164/197 (83%), Positives = 179/197 (90%)
 Frame = +3

Query: 36  MDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTKAMSKPCLELA 215
           MDYTPA SMQLDHDV IE+VEEYF NYIVNDSLGIIANAHTVFADREP KA S+PCL+LA
Sbjct: 1   MDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLA 60

Query: 216 KLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFREVKDIAPHTS 395
           + FSIAVDFPKTGVPAEIPP+L+ KEYPDFMEKPDKPTY S NVIGKLFR VKDIAPHTS
Sbjct: 61  EKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTS 120

Query: 396 SIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGN 575
            IR FT +VARRSYDPDMEV+GFE++IDDA YHK NYDYKLGNL+DYYGIK+EAEIL+G+
Sbjct: 121 CIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGS 180

Query: 576 IMKMSKSFNRRRDTETI 626
           IMKMSKSF +RRD E I
Sbjct: 181 IMKMSKSFTKRRDAEAI 197


>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  337 bits (863), Expect = 2e-90
 Identities = 163/207 (78%), Positives = 181/207 (87%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            +LIPP+Q  PMDYTPAP+  LDHDV IEEVEEYF NYIVNDSLGIIANAHTVFAD+E  K
Sbjct: 615  DLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDK 674

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            A   PC ELAKLFSIAVDFPKTGVPAEIP NL  KEYPDFMEK DKPTY S +VIGKLFR
Sbjct: 675  AYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFR 734

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVKDIAPH  +IR+FT DVAR+SYDPDMEV GFE+Y+ DAFY+KS YDYKLGNL+DYYGI
Sbjct: 735  EVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGI 794

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+E+EILSG+IM+MSKSF+RR+D E I
Sbjct: 795  KTESEILSGSIMRMSKSFDRRKDAEAI 821


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  337 bits (863), Expect = 2e-90
 Identities = 163/207 (78%), Positives = 181/207 (87%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            +LIPP+Q  PMDYTPAP+  LDHDV IEEVEEYF NYIVNDSLGIIANAHTVFAD+E  K
Sbjct: 817  DLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDK 876

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            A   PC ELAKLFSIAVDFPKTGVPAEIP NL  KEYPDFMEK DKPTY S +VIGKLFR
Sbjct: 877  AYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFR 936

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVKDIAPH  +IR+FT DVAR+SYDPDMEV GFE+Y+ DAFY+KS YDYKLGNL+DYYGI
Sbjct: 937  EVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGI 996

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+E+EILSG+IM+MSKSF+RR+D E I
Sbjct: 997  KTESEILSGSIMRMSKSFDRRKDAEAI 1023


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  335 bits (860), Expect = 5e-90
 Identities = 158/207 (76%), Positives = 184/207 (88%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            +LIP +Q EPMDY PAP+ +LDHDVTIEEVE+YF NYIVNDSLGIIANAHTVFAD+EP  
Sbjct: 813  DLIPTKQVEPMDYNPAPTTRLDHDVTIEEVEDYFTNYIVNDSLGIIANAHTVFADKEPLM 872

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            A+S+PCLELA+LFSIAVDF KTG+PAEIPP+L  KEYPDFMEKPDK  Y S  VIGKLFR
Sbjct: 873  ALSEPCLELARLFSIAVDFNKTGIPAEIPPHLRVKEYPDFMEKPDKINYASSRVIGKLFR 932

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVKDIAP TSS R+FT +VARRSYDPDMEV+GFE++ID+AF HK+ YDYKLGNL++YYG+
Sbjct: 933  EVKDIAPQTSSFRSFTKEVARRSYDPDMEVDGFEDHIDEAFLHKTEYDYKLGNLMEYYGV 992

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+EAE+LSG IMKMSK+F+RR+D E I
Sbjct: 993  KTEAEVLSGGIMKMSKTFDRRKDAEAI 1019


>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
            gi|462422197|gb|EMJ26460.1| hypothetical protein
            PRUPE_ppa001524mg [Prunus persica]
          Length = 808

 Score =  335 bits (858), Expect = 9e-90
 Identities = 161/207 (77%), Positives = 185/207 (89%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            ELIP RQ +PMDYTPAP++ LDH VTIEEVEEYF NY+VNDSLGIIANAHT FADR+P+K
Sbjct: 503  ELIPSRQIQPMDYTPAPTIALDHAVTIEEVEEYFVNYMVNDSLGIIANAHTAFADRQPSK 562

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            AMSKPC+ELAKLFSIAVDFPKTGVPA IP +L  KE+PDFMEKPDKPTY S NVIG+LFR
Sbjct: 563  AMSKPCIELAKLFSIAVDFPKTGVPAIIPQHLRVKEFPDFMEKPDKPTYQSCNVIGELFR 622

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVKD+ PH  SIR+F+ +VAR+SYD DMEV+GFE+YI+DAFY+KSNYD  LGNLLDYYGI
Sbjct: 623  EVKDVEPHDGSIRSFSREVARQSYDRDMEVDGFEDYIEDAFYYKSNYDSILGNLLDYYGI 682

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+EAEILSG++MKMSKSF +RRD + I
Sbjct: 683  KTEAEILSGSVMKMSKSFTKRRDIDPI 709


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  334 bits (856), Expect = 1e-89
 Identities = 160/207 (77%), Positives = 182/207 (87%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            ELIP +Q EPMDY+PAP+ +LDHDV IEEV+EYF NYIVNDSLGIIANAHT FAD+EP+K
Sbjct: 828  ELIPQKQFEPMDYSPAPTTRLDHDVRIEEVQEYFTNYIVNDSLGIIANAHTAFADKEPSK 887

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            AMS  C+ELA+LFSIAVDFPKTGVPA IP  L+ KEYPDFMEK +KPTY S NVIGKLFR
Sbjct: 888  AMSPSCIELARLFSIAVDFPKTGVPAVIPQELYVKEYPDFMEKLNKPTYESQNVIGKLFR 947

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVKDIAP+  S+  FT +VA RSYDPDME +GFE+YIDDAFY+KSNYDYKLGNLLDYYGI
Sbjct: 948  EVKDIAPNVGSLHFFTKEVASRSYDPDMEYDGFEDYIDDAFYYKSNYDYKLGNLLDYYGI 1007

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            KSEAEI+ G+IM+MSKSF +RRD E+I
Sbjct: 1008 KSEAEIIGGSIMRMSKSFTKRRDAESI 1034


>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
            gi|482575337|gb|EOA39524.1| hypothetical protein
            CARUB_v10008144mg [Capsella rubella]
          Length = 1107

 Score =  334 bits (856), Expect = 1e-89
 Identities = 160/207 (77%), Positives = 180/207 (86%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            ELIPPR +EPMDYTP P+  LDHDVTIEEVEEYFANYIVNDSLGIIANAHT FAD+EP K
Sbjct: 810  ELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLK 869

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            A S PC+ELA+ FSIAVDFPKTG+ AEIP +L+ KEYPDFM+KPDKPTY S NVIGKLFR
Sbjct: 870  AFSDPCIELARKFSIAVDFPKTGIAAEIPQHLYVKEYPDFMDKPDKPTYESKNVIGKLFR 929

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVK+ AP   SIR+FT DVA +SYD DMEV GFE YID+AF+HK NYDY+LGNL+DYYGI
Sbjct: 930  EVKERAPPLISIRSFTLDVALKSYDKDMEVEGFEEYIDEAFFHKGNYDYRLGNLMDYYGI 989

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+EAEILSG IM+MSKSF +RRD E+I
Sbjct: 990  KTEAEILSGGIMRMSKSFTKRRDAESI 1016


>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
            gi|557094740|gb|ESQ35322.1| hypothetical protein
            EUTSA_v10006629mg [Eutrema salsugineum]
          Length = 1108

 Score =  333 bits (854), Expect = 2e-89
 Identities = 159/208 (76%), Positives = 179/208 (86%)
 Frame = +3

Query: 3    PELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPT 182
            PELIPP  +EPMDYTP P+  LDHDVTIEE+EEYF NYIVNDSLGIIANAHT FAD+EP 
Sbjct: 808  PELIPPETSEPMDYTPEPAQILDHDVTIEEIEEYFTNYIVNDSLGIIANAHTAFADKEPL 867

Query: 183  KAMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLF 362
            KA S PC+ELA+ FSIAVDFPKTGV AEIP +L+ KEYPDFMEKPDKPTY S NVIGKLF
Sbjct: 868  KAFSDPCIELARKFSIAVDFPKTGVAAEIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLF 927

Query: 363  REVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYG 542
            REVK+ AP   SI++FT DVA ++YD DMEV GFE YID+AFYHK NYDYKLGNL+DYYG
Sbjct: 928  REVKERAPPLISIKSFTLDVASKTYDQDMEVYGFEEYIDEAFYHKGNYDYKLGNLMDYYG 987

Query: 543  IKSEAEILSGNIMKMSKSFNRRRDTETI 626
            IK+EAE+LSG IM+MSKSF +RRD E+I
Sbjct: 988  IKTEAEVLSGGIMRMSKSFTKRRDGESI 1015


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score =  331 bits (849), Expect = 9e-89
 Identities = 158/207 (76%), Positives = 182/207 (87%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            ELIPPR +EPMDYTP P+  LDHDVTIEEVEEYFANYIVNDSLGIIANAHT FAD+EP K
Sbjct: 811  ELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLK 870

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            A S PC+ELA+ FS+AVDFPKTGV AEIP +L+ KEYPDFMEKPDKPTY S NVIGKLFR
Sbjct: 871  AFSDPCIELARKFSVAVDFPKTGVAAEIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFR 930

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVK+ AP   SI++FT DVA +SYD DMEV+GFE Y+D+AF++K+NYD+KLGNL+DYYGI
Sbjct: 931  EVKERAPPLISIKSFTLDVALKSYDKDMEVDGFEEYVDEAFHYKANYDFKLGNLMDYYGI 990

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+EAEILSG IM+MSKSF +RRD E+I
Sbjct: 991  KTEAEILSGGIMRMSKSFTKRRDAESI 1017


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  330 bits (847), Expect = 2e-88
 Identities = 161/208 (77%), Positives = 178/208 (85%)
 Frame = +3

Query: 3    PELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPT 182
            P+L+PPRQ +PMDYTPAPS QLDHDVTIEEVEEYF NYIVNDSLGIIANAH VFADREP 
Sbjct: 816  PDLVPPRQFQPMDYTPAPSTQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPD 875

Query: 183  KAMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLF 362
             AMS PC +LA+LFSIAVDFPKTGVPAEIP  L  KEYPDFMEKPDKPTY S  VIGKLF
Sbjct: 876  MAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKPTYHSEKVIGKLF 935

Query: 363  REVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYG 542
            ++VKD  P  SSI  FT DVAR+SYD DM VNGFE+YID+AFY+KS YD KLGNL+DYYG
Sbjct: 936  QKVKDKTPQASSIANFTMDVARKSYDGDMIVNGFEDYIDEAFYYKSEYDNKLGNLMDYYG 995

Query: 543  IKSEAEILSGNIMKMSKSFNRRRDTETI 626
            IK+EAEILSG IMK SK+F+RR+D + I
Sbjct: 996  IKTEAEILSGGIMKASKTFDRRKDADAI 1023


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  330 bits (846), Expect = 2e-88
 Identities = 156/208 (75%), Positives = 180/208 (86%)
 Frame = +3

Query: 3    PELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPT 182
            PELIP +Q +PMDY+PA + +LDH+VTIEE+EEYF NYIVNDSLGII+NAHT FADREP 
Sbjct: 804  PELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNAHTAFADREPD 863

Query: 183  KAMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLF 362
            KAMS+PCLELAKLFSIAVDFPKTGVPAEIP  L  KEYPDFMEKPDKP+Y S NVIGKLF
Sbjct: 864  KAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPSYQSHNVIGKLF 923

Query: 363  REVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYG 542
            REVK++AP+  SI+  T +  +R YDPDMEV GFE+YIDDAF+HKS YDYKLGNL+DYYG
Sbjct: 924  REVKNLAPNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYG 983

Query: 543  IKSEAEILSGNIMKMSKSFNRRRDTETI 626
            +K+EAEIL G IMKMS+SF ++RD E I
Sbjct: 984  VKTEAEILGGGIMKMSRSFTKKRDAEAI 1011


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  330 bits (846), Expect = 2e-88
 Identities = 161/208 (77%), Positives = 177/208 (85%)
 Frame = +3

Query: 3    PELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPT 182
            P+LIPPRQ +PMDYTPAPS+QLDHDVTIEEVEEYF NY+VND LG+IANAH VFADREP 
Sbjct: 506  PDLIPPRQVQPMDYTPAPSIQLDHDVTIEEVEEYFTNYMVNDGLGVIANAHVVFADREPN 565

Query: 183  KAMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLF 362
             AMS PC+ELA+LFSIAVDFPKTGVPAEIP  L  KEYPDFMEKPDK TY S  VIGKLF
Sbjct: 566  MAMSDPCIELAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKTTYHSEKVIGKLF 625

Query: 363  REVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYG 542
            REVKD     SSI TFT DVARRSYD D+EV+GFE+YID+AF +KS YD KLGNL+DYYG
Sbjct: 626  REVKDKTTQASSITTFTRDVARRSYDTDLEVDGFEDYIDEAFDYKSEYDKKLGNLMDYYG 685

Query: 543  IKSEAEILSGNIMKMSKSFNRRRDTETI 626
            IK+EAE LSG IMK SK+F+RRRD E I
Sbjct: 686  IKTEAETLSGGIMKASKTFDRRRDAEAI 713


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score =  330 bits (845), Expect = 3e-88
 Identities = 158/207 (76%), Positives = 181/207 (87%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            ELIPPR +EPMDYTP P+  LDHDVTIEEVEEYFANYIVNDSLGIIANAHT FAD+EP K
Sbjct: 811  ELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLK 870

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            A S PC+ELA+ FS+AVDFPKTGV AEIP +L  KEYPDFMEKPDKPTY S NVIGKLFR
Sbjct: 871  AFSDPCIELARKFSVAVDFPKTGVAAEIPQHLHVKEYPDFMEKPDKPTYESKNVIGKLFR 930

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVK+ AP   SI++FT DVA +SYD DMEV+GFE Y+D+AF++K+NYD+KLGNL+DYYGI
Sbjct: 931  EVKERAPPLISIKSFTLDVALKSYDKDMEVDGFEEYVDEAFHYKANYDFKLGNLMDYYGI 990

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+EAEILSG IM+MSKSF +RRD E+I
Sbjct: 991  KTEAEILSGGIMRMSKSFTKRRDAESI 1017


>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score =  330 bits (845), Expect = 3e-88
 Identities = 158/207 (76%), Positives = 181/207 (87%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            ELIPPR +EPMDYTP P+  LDHDVTIEEVEEYFANYIVNDSLGIIANAHT FAD+EP K
Sbjct: 801  ELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLK 860

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            A S PC+ELA+ FS+AVDFPKTGV AEIP +L  KEYPDFMEKPDKPTY S NVIGKLFR
Sbjct: 861  AFSDPCIELARKFSVAVDFPKTGVAAEIPQHLHVKEYPDFMEKPDKPTYESKNVIGKLFR 920

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVK+ AP   SI++FT DVA +SYD DMEV+GFE Y+D+AF++K+NYD+KLGNL+DYYGI
Sbjct: 921  EVKERAPPLISIKSFTLDVALKSYDKDMEVDGFEEYVDEAFHYKANYDFKLGNLMDYYGI 980

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+EAEILSG IM+MSKSF +RRD E+I
Sbjct: 981  KTEAEILSGGIMRMSKSFTKRRDAESI 1007


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  329 bits (844), Expect = 4e-88
 Identities = 159/208 (76%), Positives = 178/208 (85%)
 Frame = +3

Query: 3    PELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPT 182
            PELIP +Q  PMDY+PAP+  L+H+VTIEEVEEYF NYIVNDSLGIIANAHTVFADREP 
Sbjct: 804  PELIPSKQIPPMDYSPAPTKPLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFADREPR 863

Query: 183  KAMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLF 362
            KAMS  C  LAKLFSIAVDFPKTGVPAEIP  L  KEYPDFMEKPDKPTY S NVIGKLF
Sbjct: 864  KAMSSECKWLAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPTYQSYNVIGKLF 923

Query: 363  REVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYG 542
            REVKD+AP+   IR+ T +   R YDPDMEV+G+E+Y+DDAFYHKSNYDYKLGNL++YYG
Sbjct: 924  REVKDLAPNECFIRSLTRERLERFYDPDMEVDGYEDYVDDAFYHKSNYDYKLGNLMEYYG 983

Query: 543  IKSEAEILSGNIMKMSKSFNRRRDTETI 626
            IK+EAEILSG IMKMS+SF ++RD E I
Sbjct: 984  IKTEAEILSGGIMKMSRSFTKQRDAEAI 1011


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  329 bits (844), Expect = 4e-88
 Identities = 158/207 (76%), Positives = 179/207 (86%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            EL+PPR +EPMDYTP P+  LDHDVTIEEVEEYFANYIVNDSLGIIANAHT FAD+EP K
Sbjct: 810  ELVPPRTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLK 869

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            A S PC+ELAK FS AVDFPKTGV A IP +L+ KEYPDFMEKPDKPTY S NVIGKLFR
Sbjct: 870  AFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFR 929

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVK+ AP   SI++FT DVA +SYD DMEV+GFE Y+D+AFY K+NYD+KLGNL+DYYGI
Sbjct: 930  EVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGI 989

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+EAEILSG IM+MSKSF +RRD E+I
Sbjct: 990  KTEAEILSGGIMRMSKSFTKRRDAESI 1016


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
            gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
            Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
            AltName: Full=RNA-directed RNA polymerase 1
            gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
            [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
            putative RNA-directed RNA polymerase [Arabidopsis
            thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
            polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  329 bits (844), Expect = 4e-88
 Identities = 158/207 (76%), Positives = 179/207 (86%)
 Frame = +3

Query: 6    ELIPPRQTEPMDYTPAPSMQLDHDVTIEEVEEYFANYIVNDSLGIIANAHTVFADREPTK 185
            EL+PPR +EPMDYTP P+  LDHDVTIEEVEEYFANYIVNDSLGIIANAHT FAD+EP K
Sbjct: 810  ELVPPRTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLK 869

Query: 186  AMSKPCLELAKLFSIAVDFPKTGVPAEIPPNLFAKEYPDFMEKPDKPTYVSPNVIGKLFR 365
            A S PC+ELAK FS AVDFPKTGV A IP +L+ KEYPDFMEKPDKPTY S NVIGKLFR
Sbjct: 870  AFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFR 929

Query: 366  EVKDIAPHTSSIRTFTHDVARRSYDPDMEVNGFENYIDDAFYHKSNYDYKLGNLLDYYGI 545
            EVK+ AP   SI++FT DVA +SYD DMEV+GFE Y+D+AFY K+NYD+KLGNL+DYYGI
Sbjct: 930  EVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGI 989

Query: 546  KSEAEILSGNIMKMSKSFNRRRDTETI 626
            K+EAEILSG IM+MSKSF +RRD E+I
Sbjct: 990  KTEAEILSGGIMRMSKSFTKRRDAESI 1016