BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00008827
         (3154 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34982.3| unnamed protein product [Vitis vinifera]              878   0.0  
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   878   0.0  
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The...   806   0.0  
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   813   0.0  
gb|EXC45069.1| Chloroplastic group IIA intron splicing facilitat...   811   0.0  
ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The...   786   0.0  
ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr...   762   0.0  
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp...   758   0.0  
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp...   758   0.0  
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp...   758   0.0  
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp...   758   0.0  
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp...   758   0.0  
gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus...   763   0.0  
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp...   769   0.0  
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...   761   0.0  
ref|XP_006408495.1| hypothetical protein EUTSA_v10019986mg [Eutr...   760   0.0  
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   757   0.0  
ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron sp...   738   0.0  
ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Caps...   750   0.0  
ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2...   745   0.0  

>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  878 bits (2269), Expect(2) = 0.0
 Identities = 452/678 (66%), Positives = 513/678 (75%), Gaps = 8/678 (1%)
 Frame = -1

Query: 3061 PQFVPKIPTSQNLKSSKFLVCSSTTGSETLANSAIQRIADKLRSLGYVD--ETAKQTLES 2888
            P   P    + N K SKF++ +S   ++TL  +AIQRIA+KLRSLGYVD  E+ K     
Sbjct: 48   PSISPSTFKTLNPKPSKFILRASNPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSD 107

Query: 2887 EPNHGSAGEIFIPLPQQLPKHRVGSSIDTSWSTPENPVPEPGSGSAIRRFHKLSNQAEKE 2708
            +P +GSAGEIF+PLP QLPKHRVG +ID SWS PENPVPEPG+G  I RFH+L  + ++E
Sbjct: 108  KPANGSAGEIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKRE 167

Query: 2707 KLSVRKAVEKVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRS 2528
            K  VRK  E+ PT                              GITEGIVNGIHERWRR+
Sbjct: 168  KKLVRKEDERAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRA 227

Query: 2527 EVVKIECEDLCRLNMKRTHDLLERKTGGLVVWRSGSIIVLYRGENYKYPYFLIDENSRND 2348
            EVVKI CED+C+LNMKRTHD+LERKTGGLV+WRSGS I+LYRG NYKYPYFL D N  ND
Sbjct: 228  EVVKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPND 287

Query: 2347 TSNDALLD------HNDAKERCLPNMAGVKSAESSPNNKGTQPSLIKGVGSPNRVRFIMP 2186
            +S+DA  D       +D KE C      VKSA   P NK    SLI+GVG P RVRF +P
Sbjct: 288  SSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLP 347

Query: 2185 GEAQLAEEADHLLDGLGPRFTDWWGYEPLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTN 2006
            GEAQL EEAD LLDGLGPRFTDWWGY+PLP+DADLLPA+VPGYRRPFRLLPYG+KPKLTN
Sbjct: 348  GEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTN 407

Query: 2005 DEMTILRRLGRPLPCHFALGRNRKLQGLATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAG 1826
            DEMT+LRRLGRPLPCHFALGRNRKLQGLA S++KLW KCEIAKIAVKRGVQNTNSE+MA 
Sbjct: 408  DEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAE 467

Query: 1825 ELARLTGGTLIARDREFIVFYRGKDFLPPAISSAIEERRKYAIHREKQKTVCSTAVITTQ 1646
            EL  LTGGTL++RDREFIVFYRGKDFLPPA+SSAIE RRKY IHR KQK       I  +
Sbjct: 468  ELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAE 527

Query: 1645 EPKLRTIEVASEDEHDVTDYQKKDHLSEQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXX 1466
            E +L T E AS+ + D TD QK + LS++R  RS E  ++RT+IKLSMA           
Sbjct: 528  ESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLL 587

Query: 1465 XXXXXXXXLQGPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYR 1286
                     Q PEIDKEGITEEERYMLRKVGLRMKPFLLLGRRG+FDGTVENMHLHWKYR
Sbjct: 588  AELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYR 647

Query: 1285 ELVKVISKERSYEDVHGAAQTLAAESGGILVAVERVNKGHAIIVYRGKNYERPASLRPQT 1106
            ELVK+IS  RS ED+HG A+TL AESGGILVAVERV+KG+AII+YRGKNY+RPASLRPQT
Sbjct: 648  ELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQT 707

Query: 1105 LLNKKEAMKRSLEAQRRE 1052
            LLNK+EA+KRSLEAQRRE
Sbjct: 708  LLNKREALKRSLEAQRRE 725



 Score =  237 bits (604), Expect(2) = 0.0
 Identities = 140/271 (51%), Positives = 175/271 (64%), Gaps = 36/271 (13%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAV---DKETNSIKSLEELTLPLKVKEKQRADSPSINSNDG 838
            SLKLHVL LTRN+DELK QL     DKETNS + +++  L L  +E+  AD   I+S+DG
Sbjct: 726  SLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLHL-ARERYGADVILIHSSDG 784

Query: 837  VDVSKMSLEIIQQDNQIDLSSNYEDETDKLELKSPSESVLEHTSLN-------------- 700
            +D S+ SL+    D +ID  S  + +TD+   +  SESVL+    N              
Sbjct: 785  MDSSRDSLQTSHNDKRIDFPSMCDSDTDEANPEPSSESVLKEIETNVLTDMNEEGECTTC 844

Query: 699  ----------------GDNGTKQPLVEPSNKELEPSIHKAIENRSN---IRGAPLSNRDR 577
                                T +  V+ S  E +P + + ++ RSN    R APLSNR+R
Sbjct: 845  SEDLVSQGETSCYAIVNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMPFRAAPLSNRER 904

Query: 576  LLLRKQALMMKKRPVLAVGKSNIVTGVAKTIKEHFKKYPLAIVNIKGRAKGTSVQEVVSK 397
            LLLRKQAL MKKRPV+AVG+SNIVTGVAKTIK HF+K+PLAIVN+KGRAKGTSVQEV+ K
Sbjct: 905  LLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFK 964

Query: 396  LEEATGGVLVSQEPSKVILYRGWGAGEKPGK 304
            LE+ATG VLVSQEPSKVILYRGWGA E+ G+
Sbjct: 965  LEQATGAVLVSQEPSKVILYRGWGAREENGR 995


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score =  878 bits (2269), Expect(2) = 0.0
 Identities = 452/678 (66%), Positives = 513/678 (75%), Gaps = 8/678 (1%)
 Frame = -1

Query: 3061 PQFVPKIPTSQNLKSSKFLVCSSTTGSETLANSAIQRIADKLRSLGYVD--ETAKQTLES 2888
            P   P    + N K SKF++ +S   ++TL  +AIQRIA+KLRSLGYVD  E+ K     
Sbjct: 48   PSISPSTFKTLNPKPSKFILRASNPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSD 107

Query: 2887 EPNHGSAGEIFIPLPQQLPKHRVGSSIDTSWSTPENPVPEPGSGSAIRRFHKLSNQAEKE 2708
            +P +GSAGEIF+PLP QLPKHRVG +ID SWS PENPVPEPG+G  I RFH+L  + ++E
Sbjct: 108  KPANGSAGEIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKRE 167

Query: 2707 KLSVRKAVEKVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRS 2528
            K  VRK  E+ PT                              GITEGIVNGIHERWRR+
Sbjct: 168  KKLVRKEDERAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRA 227

Query: 2527 EVVKIECEDLCRLNMKRTHDLLERKTGGLVVWRSGSIIVLYRGENYKYPYFLIDENSRND 2348
            EVVKI CED+C+LNMKRTHD+LERKTGGLV+WRSGS I+LYRG NYKYPYFL D N  ND
Sbjct: 228  EVVKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPND 287

Query: 2347 TSNDALLD------HNDAKERCLPNMAGVKSAESSPNNKGTQPSLIKGVGSPNRVRFIMP 2186
            +S+DA  D       +D KE C      VKSA   P NK    SLI+GVG P RVRF +P
Sbjct: 288  SSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLP 347

Query: 2185 GEAQLAEEADHLLDGLGPRFTDWWGYEPLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTN 2006
            GEAQL EEAD LLDGLGPRFTDWWGY+PLP+DADLLPA+VPGYRRPFRLLPYG+KPKLTN
Sbjct: 348  GEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTN 407

Query: 2005 DEMTILRRLGRPLPCHFALGRNRKLQGLATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAG 1826
            DEMT+LRRLGRPLPCHFALGRNRKLQGLA S++KLW KCEIAKIAVKRGVQNTNSE+MA 
Sbjct: 408  DEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAE 467

Query: 1825 ELARLTGGTLIARDREFIVFYRGKDFLPPAISSAIEERRKYAIHREKQKTVCSTAVITTQ 1646
            EL  LTGGTL++RDREFIVFYRGKDFLPPA+SSAIE RRKY IHR KQK       I  +
Sbjct: 468  ELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAE 527

Query: 1645 EPKLRTIEVASEDEHDVTDYQKKDHLSEQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXX 1466
            E +L T E AS+ + D TD QK + LS++R  RS E  ++RT+IKLSMA           
Sbjct: 528  ESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLL 587

Query: 1465 XXXXXXXXLQGPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYR 1286
                     Q PEIDKEGITEEERYMLRKVGLRMKPFLLLGRRG+FDGTVENMHLHWKYR
Sbjct: 588  AELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYR 647

Query: 1285 ELVKVISKERSYEDVHGAAQTLAAESGGILVAVERVNKGHAIIVYRGKNYERPASLRPQT 1106
            ELVK+IS  RS ED+HG A+TL AESGGILVAVERV+KG+AII+YRGKNY+RPASLRPQT
Sbjct: 648  ELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQT 707

Query: 1105 LLNKKEAMKRSLEAQRRE 1052
            LLNK+EA+KRSLEAQRRE
Sbjct: 708  LLNKREALKRSLEAQRRE 725



 Score =  268 bits (684), Expect(2) = 0.0
 Identities = 159/317 (50%), Positives = 201/317 (63%), Gaps = 45/317 (14%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAV---DKETNSIKSLEELTLPLKVKEKQRADSPSINSNDG 838
            SLKLHVL LTRN+DELK QL     DKETNS + +++  L L  +E+  AD   I+S+DG
Sbjct: 726  SLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLHL-ARERYGADVILIHSSDG 784

Query: 837  VDVSKMSLEIIQQDNQIDLSSNYEDETDKLELKSPSESVLEHTSLN-------------- 700
            +D S+ SL+    D +ID  S  + +TD+   +  SESVL+    N              
Sbjct: 785  MDSSRDSLQTSHNDKRIDFPSMCDSDTDEANPEPSSESVLKEIETNVLTDMNEEGECTTC 844

Query: 699  ----------------GDNGTKQPLVEPSNKELEPSIHKAIENRSN---IRGAPLSNRDR 577
                                T +  V+ S  E +P + + ++ RSN    R APLSNR+R
Sbjct: 845  SEDLVSQGETSCYAIVNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMPFRAAPLSNRER 904

Query: 576  LLLRKQALMMKKRPVLAVGKSNIVTGVAKTIKEHFKKYPLAIVNIKGRAKGTSVQEVVSK 397
            LLLRKQAL MKKRPV+AVG+SNIVTGVAKTIK HF+K+PLAIVN+KGRAKGTSVQEV+ K
Sbjct: 905  LLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFK 964

Query: 396  LEEATGGVLVSQEPSKVILYRGWGAGEKPGK---------KNTRDGGEGGVQPSVSPQLM 244
            LE+ATG VLVSQEPSKVILYRGWGA E+ G+         + T  G EGG +P+VSP+L 
Sbjct: 965  LEQATGAVLVSQEPSKVILYRGWGAREENGRSYRMNRSDARKTSAGREGGPRPTVSPELR 1024

Query: 243  AAIRFECGFESKLETGS 193
            AAIR ECG +S  + G+
Sbjct: 1025 AAIRLECGLKSNQDKGA 1041


>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
            gi|508710385|gb|EOY02282.1| CRM family member 2, putative
            isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  806 bits (2082), Expect(2) = 0.0
 Identities = 430/711 (60%), Positives = 513/711 (72%), Gaps = 16/711 (2%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQFV----PKIPTSQNLKSSKFLVCSST--TGSET 2975
            ML+PL+  P SL   P+ LIP +   + +    PK P  +N +   F++ SS   TG++T
Sbjct: 1    MLLPLYQQPFSLP--PKTLIPHSLPAKILASQYPKTP--KNSRKEIFVIRSSIKRTGNQT 56

Query: 2974 LANSAIQRIADKLRSLGYVDETAKQTLESEPNHGS--AGEIFIPLPQQLPKHRVGSSIDT 2801
            L  SAIQRIADKLRSLG+  ET     ESEP  GS   GEIF+PLP+++PK+RVG +IDT
Sbjct: 57   LPQSAIQRIADKLRSLGF-SETQNPEPESEPGSGSDSPGEIFVPLPEKIPKYRVGHTIDT 115

Query: 2800 SWSTPENPVPEPGSG--SAIRRFHKLSNQAEKEKLSVRKAVEKVPTXXXXXXXXXXXXXX 2627
            SWSTPENPVP+PGSG  S + RF ++  +  K    V++    VP+              
Sbjct: 116  SWSTPENPVPDPGSGPGSLMARFREMKRERRKVG-RVKEEDRAVPSLAELKLSAAELRRL 174

Query: 2626 XXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLERKTG 2447
                            GITEGIVNGIHERWRRSEVVKI CED+C++NMKRTH++LERKTG
Sbjct: 175  RTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEVLERKTG 234

Query: 2446 GLVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDALLDHN------DAKERCLPNMA 2285
            GLVVWRSGS I+LYRG NY+YPYFL D+ + +DTS++A  D N         E C   + 
Sbjct: 235  GLVVWRSGSKIILYRGANYRYPYFLADKIATDDTSSNASPDTNMDNVELHETESCSSEIN 294

Query: 2284 GVKSAESSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWGYE 2105
              K+A  +  NK T+P +++GVGSP+RVRF +PGEA+L EEA+HLLDGLGPRFTDWWGYE
Sbjct: 295  SAKTAIPNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYE 354

Query: 2104 PLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKLQG 1925
            PLPVD DLLPAI+PGYRRPFRLLPYGVKP LTNDEMT LRRLGRPLPCHF LGRNRKLQG
Sbjct: 355  PLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQG 414

Query: 1924 LATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKDFL 1745
            LA SIVK W KCEIAK+AVKRGVQNTNSE+MA EL  LTGGTL++RD++FIV YRGKDFL
Sbjct: 415  LAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFL 474

Query: 1744 PPAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVASEDEHDVTDYQKKDHLS 1565
            P A+SSAIEERR++ IH EKQ   CS +  T QE  +   +  SE + +    Q+ +   
Sbjct: 475  PSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESKINSAKDQRSNFFG 534

Query: 1564 EQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEERYML 1385
            + +  +S E +I++T +KLSMA                    Q  EIDKEGIT+EERYML
Sbjct: 535  DPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYML 594

Query: 1384 RKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAAESG 1205
            RKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVK+ISKE + E VH  A+ L AESG
Sbjct: 595  RKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESG 654

Query: 1204 GILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            GILVAVERV+KG+AIIVYRGKNYERP SLRPQTLL K++AMKRSLE QRR+
Sbjct: 655  GILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRK 705



 Score =  227 bits (579), Expect(2) = 0.0
 Identities = 152/341 (44%), Positives = 202/341 (59%), Gaps = 68/341 (19%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKVKEKQRADSPSINSN----- 844
            SLKLH+L LTRNV++L+ QL VDKE NS++++E+ +LPL  +E +   S     +     
Sbjct: 706  SLKLHILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEELETLQSVEYTGSVIECP 765

Query: 843  ------------DGVDVSKM-------SLEIIQQDNQ--IDLSSNYED-ETDKLELKSPS 730
                        DG + + M       ++ I Q   Q  ++ SS ++  E  K E +  +
Sbjct: 766  ASSGGHVESRDKDGSESTSMKNDKMVATISIRQPSKQEFMEPSSIHDGFENHKTESEFSA 825

Query: 729  ESVLE----------HTSLN--------------------------GDNGTKQPLVEPSN 658
            ESV            HT +                            +NG  + LVE ++
Sbjct: 826  ESVNRKSHATELRALHTQVEMVDTSYPDNLMEEIDDSGAINAEHGVSNNGPMESLVESAS 885

Query: 657  KELEPSIHKAIENRSNIRGAP---LSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGVAKT 487
              L+ SI  A+EN SN   +    LSN+DRLLLRKQAL MKKRPVLAVG+SNIVTGVAK 
Sbjct: 886  M-LDVSISSAVENVSNKMASTANFLSNKDRLLLRKQALKMKKRPVLAVGRSNIVTGVAKA 944

Query: 486  IKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGEKPG 307
            I+ HF+K+PLAIVN+KGRAKGTSVQEVV KL+EATG VLVSQEPSKVILYRGWGAG++ G
Sbjct: 945  IRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGWGAGDELG 1004

Query: 306  KKNTRDGGEGGVQ--PSVSPQLMAAIRFECGFESKLETGST 190
            + + R+  +   Q  P+VSP+L+AAIR ECG + + E  +T
Sbjct: 1005 RGDNRNAKDSLAQNRPAVSPELIAAIRLECGLQLQQEEEAT 1045


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
            gi|223543418|gb|EEF44949.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1009

 Score =  813 bits (2101), Expect(2) = 0.0
 Identities = 446/712 (62%), Positives = 518/712 (72%), Gaps = 12/712 (1%)
 Frame = -1

Query: 3151 LSSLQMLVPL--FHHPSSLSF-LPQKLIPQNKKPQFVPKIPTSQNLKSSKFLVCSSTTGS 2981
            L SL +L P      P S  F  PQ LI QN+K      +P+    KSS  + CS+   S
Sbjct: 2    LLSLHLLSPSPPLRKPYSPVFPFPQTLILQNRK------VPS----KSSITIHCSN---S 48

Query: 2980 ETLANSAIQRIADKLRSLGYVDETAK-QTLESEPNHGSAGEIFIPLPQQLPKHRVGSSID 2804
            +T+ +SAIQRIADKLRSLG+ +   +  T  S       GEIFIPLP +L K+RVG ++D
Sbjct: 49   KTVPSSAIQRIADKLRSLGFAEHNPEPHTRNSAETKQREGEIFIPLPNELSKYRVGHTLD 108

Query: 2803 TSWSTPENPVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAVEKVPTXXXXXXXXXXXXXXX 2624
             SWSTPENPVP PGSG+AI R+H+L  Q +KE+   +K   KVPT               
Sbjct: 109  PSWSTPENPVPRPGSGNAILRYHELRKQVKKERED-KKREAKVPTLAELSLSEEELRRLR 167

Query: 2623 XXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLERKTGG 2444
                           GITEGIVNGIHERWRRSEVVKI CEDLCR+NMKRTHDLLERKTGG
Sbjct: 168  RIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKRTHDLLERKTGG 227

Query: 2443 LVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDALLD---HNDAKE--RCLPNMAGV 2279
            LVVWR+GS IVLYRG NY YPYFL D  + NDTS DA+ D   HND+ +   C  ++ GV
Sbjct: 228  LVVWRAGSKIVLYRGVNYIYPYFLSDNTTENDTSIDAVQDTHKHNDSDKIKSCSSSVDGV 287

Query: 2278 KSAESSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWGYEPL 2099
            K +  SP NK  +P+LI+GVG PNRVRF +PGEAQLAEE D LL+GLGPRF+DWWGYEPL
Sbjct: 288  KFSGPSPTNKAVRPALIQGVGLPNRVRFQLPGEAQLAEEVDSLLEGLGPRFSDWWGYEPL 347

Query: 2098 PVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKLQGLA 1919
            PVDADLLPAIVPGY++PFRLLPYG+KP LTNDEMT L+RLGRPLPCHF LGRNRKLQGLA
Sbjct: 348  PVDADLLPAIVPGYQKPFRLLPYGIKPILTNDEMTTLKRLGRPLPCHFVLGRNRKLQGLA 407

Query: 1918 TSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKDFLPP 1739
             SI+KLW KCEIAKIAVKRGVQNTNSE+MA EL RLTGGTL++RDREFIV YRGKDFLP 
Sbjct: 408  ASIIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGTLLSRDREFIVLYRGKDFLPS 467

Query: 1738 AISSAIEERRKYAIHREKQKTVCSTAVITTQEP---KLRTIEVASEDEHDVTDYQKKDHL 1568
            A+SSAI+ERR +  +  K++T  ST+  T +E    +  T    S+DE    + Q  D L
Sbjct: 468  AVSSAIKERRNHVFNVAKERTDNSTSAETAKEAEDVEDGTSNSGSQDEFHGNNEQSYD-L 526

Query: 1567 SEQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEERYM 1388
            S+QRK   T+ +IKRTSI+LSMA                    Q PEIDKEGIT+EERYM
Sbjct: 527  SKQRKLSFTKEAIKRTSIRLSMALEKKAKAVKLLAEIENSEMSQQPEIDKEGITDEERYM 586

Query: 1387 LRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAAES 1208
            LRKVGL+MKPFLL+GRRGVFDGT+ENMHLHWKYRELVK+I KERS   VH  AQ+L AES
Sbjct: 587  LRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRELVKIICKERSLNAVHEVAQSLEAES 646

Query: 1207 GGILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            GGILVAVERV+KG+AI+VYRGKNY+RPA LRP TLL+K+EAMKRSLEAQRRE
Sbjct: 647  GGILVAVERVSKGYAIVVYRGKNYQRPALLRPPTLLSKREAMKRSLEAQRRE 698



 Score =  213 bits (542), Expect(2) = 0.0
 Identities = 138/306 (45%), Positives = 182/306 (59%), Gaps = 33/306 (10%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKVKEKQRAD-------SPSIN 850
            SLKLHVL LTRN+++LK +L  +         E L++ L  +     +       +  IN
Sbjct: 699  SLKLHVLRLTRNINDLKLKLLFNGNGIGRSEFESLSISLSKESHASVNIIQPDEQASQIN 758

Query: 849  SN---DGVDVSK----MSLEIIQQDNQIDLSSNYED---ETDKLELKSPSESVLEHTSLN 700
             +   DG+ + K     S E + ++    L +       ++      S SE    +  ++
Sbjct: 759  PSLLYDGIRIGKNEPESSSESLSKETHASLFTAINGGAVDSTSFPNTSMSEERGSYPCVS 818

Query: 699  GDNGTKQ-----PLVEPSNKELEPSIHKAIENRSNIRGAP--LSNRDRLLLRKQALMMKK 541
             +N   +       VE +   LE S+  +    + ++ +   LSNRDRL+LRKQAL MK 
Sbjct: 819  AENCVHENKIMGSTVESTTTVLEESVSISANEDNEMQSSTICLSNRDRLMLRKQALKMKN 878

Query: 540  RPVLAVGKSNIVTGVAKTIKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQ 361
            RPVLAVG+SNIVTGVAKTIK HFKKYPLAIVN+KGRAKGTSVQEVV +LE+ATGGVLVSQ
Sbjct: 879  RPVLAVGRSNIVTGVAKTIKAHFKKYPLAIVNVKGRAKGTSVQEVVFQLEQATGGVLVSQ 938

Query: 360  EPSKVILYRGWGAGEKP---GKKNTRDGGEGGV------QPSVSPQLMAAIRFECGFESK 208
            EPSKVILYRGWGA ++P   GKKN  D G+  V      +  +SP+LMAAIR ECG ++K
Sbjct: 939  EPSKVILYRGWGAFDEPGHRGKKNAHDSGKTSVVKEESSRLGMSPELMAAIRLECGLQNK 998

Query: 207  LETGST 190
             E   T
Sbjct: 999  QEQKQT 1004


>gb|EXC45069.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 966

 Score =  811 bits (2096), Expect(2) = 0.0
 Identities = 441/710 (62%), Positives = 505/710 (71%), Gaps = 15/710 (2%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQFVPKIPTSQNLKSSKFLVCSSTTGSETLA-NSA 2960
            ML+P    P+S   LP KL+     P F    P S   K  KF V SS   ++TL   SA
Sbjct: 1    MLLPPSQLPTSP--LPPKLLTHRSPPLFFFSSPFSTTPKPLKFTVRSSNADAQTLLPKSA 58

Query: 2959 IQRIADKLRSLGYVDETAKQTLESEPNHGSAGEIFIPLPQQLPKHRVGSSIDTSWSTPEN 2780
            IQRI++KLRSLG+ DE        EP   SAGEIF+PLP +LPK RVG +ID SWS+PEN
Sbjct: 59   IQRISEKLRSLGFTDENPSP----EPERSSAGEIFVPLPHRLPKQRVGHTIDASWSSPEN 114

Query: 2779 PVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAV--------EKVPTXXXXXXXXXXXXXXX 2624
            PVPEPGSG+AI+RF +L  +  +++   RK          E+VPT               
Sbjct: 115  PVPEPGSGTAIKRFRELKTEVRRQRREERKESAANAREERERVPTLAELRLPPEELRRLR 174

Query: 2623 XXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLERKTGG 2444
                           GITEGIVNGIHERWR+SEVVKIECED+CR+NMKRTHDLLE+KTGG
Sbjct: 175  TLGIGLRKKVKVGKAGITEGIVNGIHERWRQSEVVKIECEDICRMNMKRTHDLLEKKTGG 234

Query: 2443 LVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDALL------DHNDAKERCLPNMAG 2282
            LVVWRSGS IVLYRG  YKYPYF + +    D S+ A L      D    K     ++ G
Sbjct: 235  LVVWRSGSKIVLYRGIKYKYPYFFVGK----DASHTATLPVPDVGDEEQNKTDTSSSIDG 290

Query: 2281 VKSAESSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWGYEP 2102
            V++   +P NK  QPSLI+GVG PNRVRF +PGEAQLAEEAD LLDGLGPRFTDWWGY+P
Sbjct: 291  VETVAPTPGNKLVQPSLIQGVGLPNRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDP 350

Query: 2101 LPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKLQGL 1922
             PVDADLL  IV GYRRPFRLLPYGV PKLT+DEMT LRRL RPLPCHFALGRNR LQGL
Sbjct: 351  QPVDADLLRPIVHGYRRPFRLLPYGVLPKLTDDEMTTLRRLARPLPCHFALGRNRNLQGL 410

Query: 1921 ATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKDFLP 1742
            A+S+VKLW KCE+AKIA+KRGVQNTNSE+MA EL  LTGGTL+ARDREFIV YRGKDFLP
Sbjct: 411  ASSVVKLWEKCEVAKIAIKRGVQNTNSEMMAEELKSLTGGTLLARDREFIVLYRGKDFLP 470

Query: 1741 PAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVASEDEHDVTDYQKKDHLSE 1562
             A+SSAIEERRKY I  +K KT   T+V T Q+ +L ++   + +  ++  + KK   SE
Sbjct: 471  SAVSSAIEERRKYVIQAKKLKTEHQTSVKTEQD-QLGSVVCGASELREINGH-KKRLPSE 528

Query: 1561 QRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEERYMLR 1382
            QRKP   E S+K TSIKLSMA                    Q PEIDKEGIT+EERYMLR
Sbjct: 529  QRKPSVAETSVKGTSIKLSMALEKKAKAEQLLAELEKAESRQQPEIDKEGITKEERYMLR 588

Query: 1381 KVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAAESGG 1202
            K+GLRMKPFLLLGRRGVFDGT+ENMHLHWKYRELVKVIS E+S E VH  AQTL AESGG
Sbjct: 589  KIGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKVISNEKSIEAVHQVAQTLEAESGG 648

Query: 1201 ILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            ILVAVER +KG+AIIVYRGKNYERPASLRPQTLL K+ AMKRS+EAQRR+
Sbjct: 649  ILVAVERESKGYAIIVYRGKNYERPASLRPQTLLTKRAAMKRSIEAQRRQ 698



 Score =  208 bits (530), Expect(2) = 0.0
 Identities = 134/283 (47%), Positives = 174/283 (61%), Gaps = 10/283 (3%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLK--VKEKQRADSPSINSNDGV 835
            SLKLHVL+LT+N+D+LK QL  DK+ N ++  +E +  ++  V   Q A+S S+++    
Sbjct: 699  SLKLHVLKLTKNIDDLKLQLVKDKQRNKMQPADESSNLVRDEVNGIQSAESLSLDA---- 754

Query: 834  DVSKMSLEIIQQDNQIDLSSNYEDETDKLELKSPSESVLEHTSLNGDNGTKQPLVEPSNK 655
            +V   SL      ++   +          +     E  +E ++ +  NG           
Sbjct: 755  EVKSGSLSFPTTSHEEMSNGMNSSAAVGAQHDVSDEEEVESSAKSDKNG----------- 803

Query: 654  ELEPSIHKAIE---NRSNIRGAPLSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGVAKTI 484
             LEPS+    +   N    R   LSNR+RLLLRKQAL MKKRPVLAVG++NIV+GVAK I
Sbjct: 804  -LEPSVPVIADKGLNEMPSRTIILSNRERLLLRKQALKMKKRPVLAVGRNNIVSGVAKAI 862

Query: 483  KEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGEKPG- 307
              HF+KYPLAIVN+KGRAKGTSVQEVV  LE+ATG VLVSQEPSKVILYRGWGAGE    
Sbjct: 863  NAHFQKYPLAIVNVKGRAKGTSVQEVVFMLEQATGAVLVSQEPSKVILYRGWGAGESSDH 922

Query: 306  --KKNTRDGGE--GGVQPSVSPQLMAAIRFECGFESKLETGST 190
              KKNT D         P+VSP+L+ AIR ECG +++ +  ST
Sbjct: 923  SVKKNTTDARRKLESQPPAVSPELLDAIRTECGLQNQPKGDST 965


>ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
            gi|508710384|gb|EOY02281.1| CRM family member 2, putative
            isoform 1 [Theobroma cacao]
          Length = 1087

 Score =  786 bits (2029), Expect(2) = 0.0
 Identities = 430/753 (57%), Positives = 513/753 (68%), Gaps = 58/753 (7%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQFV----PKIPTSQNLKSSKFLVCSST--TGSET 2975
            ML+PL+  P SL   P+ LIP +   + +    PK P  +N +   F++ SS   TG++T
Sbjct: 1    MLLPLYQQPFSLP--PKTLIPHSLPAKILASQYPKTP--KNSRKEIFVIRSSIKRTGNQT 56

Query: 2974 LANSAIQRIADKLRSLGYVDETAKQTLESEPNHGS--AGEIFIPLPQQLPKHRVGSSIDT 2801
            L  SAIQRIADKLRSLG+  ET     ESEP  GS   GEIF+PLP+++PK+RVG +IDT
Sbjct: 57   LPQSAIQRIADKLRSLGF-SETQNPEPESEPGSGSDSPGEIFVPLPEKIPKYRVGHTIDT 115

Query: 2800 SWSTPENPVPEPGSG--SAIRRFHKLSNQAEKEKLSVRKAVEKVPTXXXXXXXXXXXXXX 2627
            SWSTPENPVP+PGSG  S + RF ++  +  K    V++    VP+              
Sbjct: 116  SWSTPENPVPDPGSGPGSLMARFREMKRERRKVG-RVKEEDRAVPSLAELKLSAAELRRL 174

Query: 2626 XXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLE---- 2459
                            GITEGIVNGIHERWRRSEVVKI CED+C++NMKRTH++LE    
Sbjct: 175  RTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEVLEVCSL 234

Query: 2458 --------------------------------------RKTGGLVVWRSGSIIVLYRGEN 2393
                                                  RKTGGLVVWRSGS I+LYRG N
Sbjct: 235  IWLFSLLLELFFFIALSMIDEEMRLIKVGLWLKKKLQMRKTGGLVVWRSGSKIILYRGAN 294

Query: 2392 YKYPYFLIDENSRNDTSNDALLDHN------DAKERCLPNMAGVKSAESSPNNKGTQPSL 2231
            Y+YPYFL D+ + +DTS++A  D N         E C   +   K+A  +  NK T+P +
Sbjct: 295  YRYPYFLADKIATDDTSSNASPDTNMDNVELHETESCSSEINSAKTAIPNATNKMTKPMI 354

Query: 2230 IKGVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWGYEPLPVDADLLPAIVPGYRR 2051
            ++GVGSP+RVRF +PGEA+L EEA+HLLDGLGPRFTDWWGYEPLPVD DLLPAI+PGYRR
Sbjct: 355  VQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRR 414

Query: 2050 PFRLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKLQGLATSIVKLWGKCEIAKIA 1871
            PFRLLPYGVKP LTNDEMT LRRLGRPLPCHF LGRNRKLQGLA SIVK W KCEIAK+A
Sbjct: 415  PFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAASIVKHWEKCEIAKVA 474

Query: 1870 VKRGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKDFLPPAISSAIEERRKYAIHR 1691
            VKRGVQNTNSE+MA EL  LTGGTL++RD++FIV YRGKDFLP A+SSAIEERR++ IH 
Sbjct: 475  VKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRRHVIHV 534

Query: 1690 EKQKTVCSTAVITTQEPKLRTIEVASEDEHDVTDYQKKDHLSEQRKPRSTEVSIKRTSIK 1511
            EKQ   CS +  T QE  +   +  SE + +    Q+ +   + +  +S E +I++T +K
Sbjct: 535  EKQGAECSKSKKTAQEVIVEDTKSGSESKINSAKDQRSNFFGDPKNMKSAEAAIRKTDVK 594

Query: 1510 LSMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGV 1331
            LSMA                    Q  EIDKEGIT+EERYMLRKVGLRMKPFLLLGRRGV
Sbjct: 595  LSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRGV 654

Query: 1330 FDGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAAESGGILVAVERVNKGHAIIVY 1151
            FDGTVENMHLHWKYRELVK+ISKE + E VH  A+ L AESGGILVAVERV+KG+AIIVY
Sbjct: 655  FDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIVY 714

Query: 1150 RGKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            RGKNYERP SLRPQTLL K++AMKRSLE QRR+
Sbjct: 715  RGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRK 747



 Score =  227 bits (579), Expect(2) = 0.0
 Identities = 152/341 (44%), Positives = 202/341 (59%), Gaps = 68/341 (19%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKVKEKQRADSPSINSN----- 844
            SLKLH+L LTRNV++L+ QL VDKE NS++++E+ +LPL  +E +   S     +     
Sbjct: 748  SLKLHILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEELETLQSVEYTGSVIECP 807

Query: 843  ------------DGVDVSKM-------SLEIIQQDNQ--IDLSSNYED-ETDKLELKSPS 730
                        DG + + M       ++ I Q   Q  ++ SS ++  E  K E +  +
Sbjct: 808  ASSGGHVESRDKDGSESTSMKNDKMVATISIRQPSKQEFMEPSSIHDGFENHKTESEFSA 867

Query: 729  ESVLE----------HTSLN--------------------------GDNGTKQPLVEPSN 658
            ESV            HT +                            +NG  + LVE ++
Sbjct: 868  ESVNRKSHATELRALHTQVEMVDTSYPDNLMEEIDDSGAINAEHGVSNNGPMESLVESAS 927

Query: 657  KELEPSIHKAIENRSNIRGAP---LSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGVAKT 487
              L+ SI  A+EN SN   +    LSN+DRLLLRKQAL MKKRPVLAVG+SNIVTGVAK 
Sbjct: 928  M-LDVSISSAVENVSNKMASTANFLSNKDRLLLRKQALKMKKRPVLAVGRSNIVTGVAKA 986

Query: 486  IKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGEKPG 307
            I+ HF+K+PLAIVN+KGRAKGTSVQEVV KL+EATG VLVSQEPSKVILYRGWGAG++ G
Sbjct: 987  IRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGWGAGDELG 1046

Query: 306  KKNTRDGGEGGVQ--PSVSPQLMAAIRFECGFESKLETGST 190
            + + R+  +   Q  P+VSP+L+AAIR ECG + + E  +T
Sbjct: 1047 RGDNRNAKDSLAQNRPAVSPELIAAIRLECGLQLQQEEEAT 1087


>ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina]
            gi|557533064|gb|ESR44247.1| hypothetical protein
            CICLE_v10013715mg [Citrus clementina]
          Length = 1062

 Score =  762 bits (1967), Expect(2) = 0.0
 Identities = 429/726 (59%), Positives = 505/726 (69%), Gaps = 31/726 (4%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQFV-PKIPTSQNLKSSKFLV--CSST----TGSE 2978
            +L   +H+P     L  K +  +  P F   K  + QN +     V  CS T    T SE
Sbjct: 2    LLSHYYHNP----ILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSE 57

Query: 2977 TLAN----SAIQRIADKLRSLGYVDETAKQ--TLESEPNH---GSAGEIFIPLPQQLPKH 2825
            T       SAIQRIADKLRSLG V++T  +  TL  EP      +AGEIFIPLP ++PK+
Sbjct: 58   TRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKY 117

Query: 2824 RVGSSIDTSWSTPENPVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAV-----EKVPTXXX 2660
            RVG +ID SWSTPENPVP PG+G+AI R+++L+ +  ++K   + +      ++VPT   
Sbjct: 118  RVGHTIDDSWSTPENPVPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAE 177

Query: 2659 XXXXXXXXXXXXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMK 2480
                                       GITEGIVNGIHERWR +EVVKI CEDLCRLNMK
Sbjct: 178  LKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMK 237

Query: 2479 RTHDLLERKTGGLVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDAL---LDHNDAK 2309
            RTHD LERKTGGLVVWRSGS I+LYRG +YKYPYFL DE+S +  S+D L   L  ++  
Sbjct: 238  RTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGL 297

Query: 2308 ERCLPNMAGVKSAE---SSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGL 2138
            +    + +G  SA+    SP NK  Q +LI  VGSP+++R+ +PGEA+L EEAD LLDGL
Sbjct: 298  DETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGL 357

Query: 2137 GPRFTDWWGYEPLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCH 1958
            GPRFTDWWGY+P PVDADLLPA VPGYRRPFRLLPYGV+PKLTNDEMT LRRLGRPLPCH
Sbjct: 358  GPRFTDWWGYDPQPVDADLLPATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCH 417

Query: 1957 FALGRNRKLQGLATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDRE 1778
            FALGRNR LQGLA +IVKLW KCEIAKIAVKRG QNTNSE+MA EL RLTGGTL++RDRE
Sbjct: 418  FALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDRE 477

Query: 1777 FIVFYRGKDFLPPAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVAS----E 1610
            FIVFYRGKDFLPPA SSAIEERRK+           ST+  + +EP+L      S    +
Sbjct: 478  FIVFYRGKDFLPPAASSAIEERRKHEF---------STSNDSKEEPELGNRHDNSGDNTQ 528

Query: 1609 DEHDVTDYQKKDHLSEQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGP 1430
            DE   T+ Q     SEQ++ RS EV+I+RTSI+LS A                    Q  
Sbjct: 529  DEFGCTNDQTSTMHSEQKERRSAEVAIRRTSIRLSRALEKKAEAEKLLAELEEERPEQ-Y 587

Query: 1429 EIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSY 1250
            E+DKEGITEEERYMLRKVGLRMK FLL+GRRGVFDGTVENMHLHWK+RELVK+ISK+R  
Sbjct: 588  EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKI 647

Query: 1249 EDVHGAAQTLAAESGGILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSL 1070
            E     A+TL  ESGGILVAVERVNKG+AII+YRGKNYERPA LRP+TLL K+EAMKRSL
Sbjct: 648  EAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSL 707

Query: 1069 EAQRRE 1052
            EAQRR+
Sbjct: 708  EAQRRQ 713



 Score =  227 bits (579), Expect(2) = 0.0
 Identities = 150/344 (43%), Positives = 195/344 (56%), Gaps = 75/344 (21%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPL--------------------- 892
            SLKLHVLELTRN+++LK QL  DKE NS+++++E  LPL                     
Sbjct: 714  SLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVGSIIFLMIWKSSNIPEIVFG 773

Query: 891  ---KVKEKQRADSPSINSNDGVDVSKMSLEIIQQDNQIDLSSNYEDETDKLELKSPSESV 721
               K + +  AD  S  SND  D +      IQQD Q +  ++     +++E +S  +SV
Sbjct: 774  IFFKARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGISFNEIESESSLKSV 833

Query: 720  LEHTSLN------------------------GDNGTKQPLVEPS------NKELEPSIHK 631
             + + LN                         DN  ++  +E +      N+ +E     
Sbjct: 834  SKESQLNMIADFFAEGVASGTPSCPDNSMCSSDNEPRESSIESAKSRSSENEPIEQCFEL 893

Query: 630  A--------------IENRSNIRGAPLSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGVA 493
            A              + N +N R   LSNRDRLLLRKQAL MKKRPVLAVG+SNIVTGVA
Sbjct: 894  AKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVA 953

Query: 492  KTIKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGEK 313
            K IK HF+KYPLAIVN+KGRAKGTSVQEVV+KLEEATG VLVSQEPSKVILYRGWGA ++
Sbjct: 954  KAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDE 1013

Query: 312  P---GKKNTRDG----GEGGVQPSVSPQLMAAIRFECGFESKLE 202
                G++N+R       +    P+VS +L+AAI+ ECG + + E
Sbjct: 1014 SSPRGRQNSRAKLSIVRDVRPWPAVSRELLAAIKLECGLQGQQE 1057


>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 1062

 Score =  758 bits (1956), Expect(2) = 0.0
 Identities = 426/726 (58%), Positives = 504/726 (69%), Gaps = 31/726 (4%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQFV-PKIPTSQNLKSSKFLV--CSST----TGSE 2978
            +L   +H+P     L  K +  +  P F   K  + QN +     V  CS T    T SE
Sbjct: 2    LLSHYYHNP----ILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSE 57

Query: 2977 TLAN----SAIQRIADKLRSLGYVDETAKQ--TLESEPNH---GSAGEIFIPLPQQLPKH 2825
            T       SAIQRIADKLRSLG V++T  +  TL  EP      +AGEIFIPLP ++PK+
Sbjct: 58   TRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKY 117

Query: 2824 RVGSSIDTSWSTPENPVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAV-----EKVPTXXX 2660
            RVG +ID SWSTPENP+P PG+G+AI R+++L+ +  ++K   + +      ++VPT   
Sbjct: 118  RVGHTIDDSWSTPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAE 177

Query: 2659 XXXXXXXXXXXXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMK 2480
                                       GITEGIVNGIHERWR +EVVKI CEDLCRLNMK
Sbjct: 178  LKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMK 237

Query: 2479 RTHDLLERKTGGLVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDAL---LDHNDAK 2309
            RTHD LERKTGGLVVWRSGS I+LYRG +YKYPYFL DE+S +  S+D L   L  ++  
Sbjct: 238  RTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGL 297

Query: 2308 ERCLPNMAGVKSAE---SSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGL 2138
            +    + +G  SA+    SP NK  Q +LI  VGSP+++R+ +PGEA+L EEAD LLDGL
Sbjct: 298  DETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGL 357

Query: 2137 GPRFTDWWGYEPLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCH 1958
            GPRFTDWWGY+P PVDADLL A VPGYRRPFRLLPYGV+PKLTNDEMT LRRLGRPLPCH
Sbjct: 358  GPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCH 417

Query: 1957 FALGRNRKLQGLATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDRE 1778
            FALGRNR LQGLA +IVKLW KCEIAKIAVKRG QNTNSE+MA EL RLTGGTL++RDRE
Sbjct: 418  FALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDRE 477

Query: 1777 FIVFYRGKDFLPPAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVAS----E 1610
            FIVFYRGKDFLPPA S AIEERRK+           ST+  + +EP+L      S    +
Sbjct: 478  FIVFYRGKDFLPPAASCAIEERRKHEF---------STSNDSKEEPELGNRHDNSGDNTQ 528

Query: 1609 DEHDVTDYQKKDHLSEQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGP 1430
            DE   T+ QK    SEQ++ RS EV+I+RT+I+LS A                    Q  
Sbjct: 529  DEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQ-Y 587

Query: 1429 EIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSY 1250
            E+DKEGITEEERYMLRKVGLRMK FLL+GRRGVFDGTVENMHLHWK+RELVK+ISK+R  
Sbjct: 588  EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKI 647

Query: 1249 EDVHGAAQTLAAESGGILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSL 1070
            E     A+TL  ESGGILVAVERVNKG+AII+YRGKNYERPA LRP+TLL K+EAMKRSL
Sbjct: 648  EAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSL 707

Query: 1069 EAQRRE 1052
            EAQRR+
Sbjct: 708  EAQRRQ 713



 Score =  230 bits (586), Expect(2) = 0.0
 Identities = 152/344 (44%), Positives = 196/344 (56%), Gaps = 75/344 (21%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKVKE----------------- 880
            SLKLHVLELTRN+++LK QL  DKE NS+++++E  LPL  +E                 
Sbjct: 714  SLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHE 773

Query: 879  -------KQRADSPSINSNDGVDVSKMSLEIIQQDNQIDLSSNYEDETDKLELKSPSESV 721
                   +  AD  S  SND  D +      IQQD Q +  ++     +++E KS  +SV
Sbjct: 774  VNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGISINEIESKSSLKSV 833

Query: 720  LEHTSLN------------------------GDNGTKQPLVEPS------NKELEPSIHK 631
             + + LN                         DN  ++  +E +      N+ +E S   
Sbjct: 834  SKESQLNMIADFFAEGVASGTSSCPDNSMCSSDNEPRESSIESAKSRSSENEPIEQSFEL 893

Query: 630  A--------------IENRSNIRGAPLSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGVA 493
            A              + N +N R   LSNRDRLLLRKQAL MKKRPVLAVG+SNIVTGVA
Sbjct: 894  AKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVA 953

Query: 492  KTIKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGEK 313
            K IK HF+KYPLAIVN+KGRAKGTSVQEVV+KLEEATG VLVSQEPSKVILYRGWGA ++
Sbjct: 954  KAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDE 1013

Query: 312  P---GKKNTRDG----GEGGVQPSVSPQLMAAIRFECGFESKLE 202
                G++N+R       +    P+VS +L+AAI+ ECG + + E
Sbjct: 1014 SSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQGQQE 1057


>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1031

 Score =  758 bits (1956), Expect(2) = 0.0
 Identities = 426/726 (58%), Positives = 504/726 (69%), Gaps = 31/726 (4%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQFV-PKIPTSQNLKSSKFLV--CSST----TGSE 2978
            +L   +H+P     L  K +  +  P F   K  + QN +     V  CS T    T SE
Sbjct: 2    LLSHYYHNP----ILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSE 57

Query: 2977 TLAN----SAIQRIADKLRSLGYVDETAKQ--TLESEPNH---GSAGEIFIPLPQQLPKH 2825
            T       SAIQRIADKLRSLG V++T  +  TL  EP      +AGEIFIPLP ++PK+
Sbjct: 58   TRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKY 117

Query: 2824 RVGSSIDTSWSTPENPVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAV-----EKVPTXXX 2660
            RVG +ID SWSTPENP+P PG+G+AI R+++L+ +  ++K   + +      ++VPT   
Sbjct: 118  RVGHTIDDSWSTPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAE 177

Query: 2659 XXXXXXXXXXXXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMK 2480
                                       GITEGIVNGIHERWR +EVVKI CEDLCRLNMK
Sbjct: 178  LKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMK 237

Query: 2479 RTHDLLERKTGGLVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDAL---LDHNDAK 2309
            RTHD LERKTGGLVVWRSGS I+LYRG +YKYPYFL DE+S +  S+D L   L  ++  
Sbjct: 238  RTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGL 297

Query: 2308 ERCLPNMAGVKSAE---SSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGL 2138
            +    + +G  SA+    SP NK  Q +LI  VGSP+++R+ +PGEA+L EEAD LLDGL
Sbjct: 298  DETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGL 357

Query: 2137 GPRFTDWWGYEPLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCH 1958
            GPRFTDWWGY+P PVDADLL A VPGYRRPFRLLPYGV+PKLTNDEMT LRRLGRPLPCH
Sbjct: 358  GPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCH 417

Query: 1957 FALGRNRKLQGLATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDRE 1778
            FALGRNR LQGLA +IVKLW KCEIAKIAVKRG QNTNSE+MA EL RLTGGTL++RDRE
Sbjct: 418  FALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDRE 477

Query: 1777 FIVFYRGKDFLPPAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVAS----E 1610
            FIVFYRGKDFLPPA S AIEERRK+           ST+  + +EP+L      S    +
Sbjct: 478  FIVFYRGKDFLPPAASCAIEERRKHEF---------STSNDSKEEPELGNRHDNSGDNTQ 528

Query: 1609 DEHDVTDYQKKDHLSEQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGP 1430
            DE   T+ QK    SEQ++ RS EV+I+RT+I+LS A                    Q  
Sbjct: 529  DEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQ-Y 587

Query: 1429 EIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSY 1250
            E+DKEGITEEERYMLRKVGLRMK FLL+GRRGVFDGTVENMHLHWK+RELVK+ISK+R  
Sbjct: 588  EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKI 647

Query: 1249 EDVHGAAQTLAAESGGILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSL 1070
            E     A+TL  ESGGILVAVERVNKG+AII+YRGKNYERPA LRP+TLL K+EAMKRSL
Sbjct: 648  EAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSL 707

Query: 1069 EAQRRE 1052
            EAQRR+
Sbjct: 708  EAQRRQ 713



 Score =  228 bits (582), Expect(2) = 0.0
 Identities = 149/321 (46%), Positives = 192/321 (59%), Gaps = 52/321 (16%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKVKE----------------- 880
            SLKLHVLELTRN+++LK QL  DKE NS+++++E  LPL  +E                 
Sbjct: 714  SLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHE 773

Query: 879  -------KQRADSPSINSNDGVDVSKMSLEIIQQDNQID-LSSNYEDETDKLELKSPSES 724
                   +  AD  S  SND  D +      IQQD Q + L+ N         + S + S
Sbjct: 774  VNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHN--------GVASGTSS 825

Query: 723  VLEHTSLNGDNGTKQPLVEPS------NKELEPSIHKA--------------IENRSNIR 604
              +++  + DN  ++  +E +      N+ +E S   A              + N +N R
Sbjct: 826  CPDNSMCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSR 885

Query: 603  GAPLSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGVAKTIKEHFKKYPLAIVNIKGRAKG 424
               LSNRDRLLLRKQAL MKKRPVLAVG+SNIVTGVAK IK HF+KYPLAIVN+KGRAKG
Sbjct: 886  AIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKG 945

Query: 423  TSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGEKP---GKKNTRDG----GEGGVQP 265
            TSVQEVV+KLEEATG VLVSQEPSKVILYRGWGA ++    G++N+R       +    P
Sbjct: 946  TSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWP 1005

Query: 264  SVSPQLMAAIRFECGFESKLE 202
            +VS +L+AAI+ ECG + + E
Sbjct: 1006 AVSRELLAAIKLECGLQGQQE 1026


>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1045

 Score =  758 bits (1956), Expect(2) = 0.0
 Identities = 426/726 (58%), Positives = 504/726 (69%), Gaps = 31/726 (4%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQFV-PKIPTSQNLKSSKFLV--CSST----TGSE 2978
            +L   +H+P     L  K +  +  P F   K  + QN +     V  CS T    T SE
Sbjct: 2    LLSHYYHNP----ILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSE 57

Query: 2977 TLAN----SAIQRIADKLRSLGYVDETAKQ--TLESEPNH---GSAGEIFIPLPQQLPKH 2825
            T       SAIQRIADKLRSLG V++T  +  TL  EP      +AGEIFIPLP ++PK+
Sbjct: 58   TRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKY 117

Query: 2824 RVGSSIDTSWSTPENPVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAV-----EKVPTXXX 2660
            RVG +ID SWSTPENP+P PG+G+AI R+++L+ +  ++K   + +      ++VPT   
Sbjct: 118  RVGHTIDDSWSTPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAE 177

Query: 2659 XXXXXXXXXXXXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMK 2480
                                       GITEGIVNGIHERWR +EVVKI CEDLCRLNMK
Sbjct: 178  LKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMK 237

Query: 2479 RTHDLLERKTGGLVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDAL---LDHNDAK 2309
            RTHD LERKTGGLVVWRSGS I+LYRG +YKYPYFL DE+S +  S+D L   L  ++  
Sbjct: 238  RTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGL 297

Query: 2308 ERCLPNMAGVKSAE---SSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGL 2138
            +    + +G  SA+    SP NK  Q +LI  VGSP+++R+ +PGEA+L EEAD LLDGL
Sbjct: 298  DETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGL 357

Query: 2137 GPRFTDWWGYEPLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCH 1958
            GPRFTDWWGY+P PVDADLL A VPGYRRPFRLLPYGV+PKLTNDEMT LRRLGRPLPCH
Sbjct: 358  GPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCH 417

Query: 1957 FALGRNRKLQGLATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDRE 1778
            FALGRNR LQGLA +IVKLW KCEIAKIAVKRG QNTNSE+MA EL RLTGGTL++RDRE
Sbjct: 418  FALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDRE 477

Query: 1777 FIVFYRGKDFLPPAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVAS----E 1610
            FIVFYRGKDFLPPA S AIEERRK+           ST+  + +EP+L      S    +
Sbjct: 478  FIVFYRGKDFLPPAASCAIEERRKHEF---------STSNDSKEEPELGNRHDNSGDNTQ 528

Query: 1609 DEHDVTDYQKKDHLSEQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGP 1430
            DE   T+ QK    SEQ++ RS EV+I+RT+I+LS A                    Q  
Sbjct: 529  DEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQ-Y 587

Query: 1429 EIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSY 1250
            E+DKEGITEEERYMLRKVGLRMK FLL+GRRGVFDGTVENMHLHWK+RELVK+ISK+R  
Sbjct: 588  EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKI 647

Query: 1249 EDVHGAAQTLAAESGGILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSL 1070
            E     A+TL  ESGGILVAVERVNKG+AII+YRGKNYERPA LRP+TLL K+EAMKRSL
Sbjct: 648  EAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSL 707

Query: 1069 EAQRRE 1052
            EAQRR+
Sbjct: 708  EAQRRQ 713



 Score =  227 bits (578), Expect(2) = 0.0
 Identities = 149/327 (45%), Positives = 193/327 (59%), Gaps = 58/327 (17%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKVKE----------------- 880
            SLKLHVLELTRN+++LK QL  DKE NS+++++E  LPL  +E                 
Sbjct: 714  SLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHE 773

Query: 879  -------KQRADSPSINSNDGVDVSKMSLEIIQQDNQID-LSSNYEDETDKLELKSPSES 724
                   +  AD  S  SND  D +      IQQD Q + L+ N           +  + 
Sbjct: 774  VNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGVASGTSSCPDNSMQE 833

Query: 723  VLEHTSL------NGDNGTKQPLVEPS------NKELEPSIHKA--------------IE 622
            V+E+ ++      + DN  ++  +E +      N+ +E S   A              + 
Sbjct: 834  VMEYNTIVDAEQCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVW 893

Query: 621  NRSNIRGAPLSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGVAKTIKEHFKKYPLAIVNI 442
            N +N R   LSNRDRLLLRKQAL MKKRPVLAVG+SNIVTGVAK IK HF+KYPLAIVN+
Sbjct: 894  NENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNV 953

Query: 441  KGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGEKP---GKKNTRDG----G 283
            KGRAKGTSVQEVV+KLEEATG VLVSQEPSKVILYRGWGA ++    G++N+R       
Sbjct: 954  KGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVR 1013

Query: 282  EGGVQPSVSPQLMAAIRFECGFESKLE 202
            +    P+VS +L+AAI+ ECG + + E
Sbjct: 1014 DVRPWPAVSRELLAAIKLECGLQGQQE 1040


>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 1050

 Score =  758 bits (1956), Expect(2) = 0.0
 Identities = 426/726 (58%), Positives = 504/726 (69%), Gaps = 31/726 (4%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQFV-PKIPTSQNLKSSKFLV--CSST----TGSE 2978
            +L   +H+P     L  K +  +  P F   K  + QN +     V  CS T    T SE
Sbjct: 2    LLSHYYHNP----ILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSE 57

Query: 2977 TLAN----SAIQRIADKLRSLGYVDETAKQ--TLESEPNH---GSAGEIFIPLPQQLPKH 2825
            T       SAIQRIADKLRSLG V++T  +  TL  EP      +AGEIFIPLP ++PK+
Sbjct: 58   TRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKY 117

Query: 2824 RVGSSIDTSWSTPENPVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAV-----EKVPTXXX 2660
            RVG +ID SWSTPENP+P PG+G+AI R+++L+ +  ++K   + +      ++VPT   
Sbjct: 118  RVGHTIDDSWSTPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAE 177

Query: 2659 XXXXXXXXXXXXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMK 2480
                                       GITEGIVNGIHERWR +EVVKI CEDLCRLNMK
Sbjct: 178  LKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMK 237

Query: 2479 RTHDLLERKTGGLVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDAL---LDHNDAK 2309
            RTHD LERKTGGLVVWRSGS I+LYRG +YKYPYFL DE+S +  S+D L   L  ++  
Sbjct: 238  RTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGL 297

Query: 2308 ERCLPNMAGVKSAE---SSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGL 2138
            +    + +G  SA+    SP NK  Q +LI  VGSP+++R+ +PGEA+L EEAD LLDGL
Sbjct: 298  DETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGL 357

Query: 2137 GPRFTDWWGYEPLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCH 1958
            GPRFTDWWGY+P PVDADLL A VPGYRRPFRLLPYGV+PKLTNDEMT LRRLGRPLPCH
Sbjct: 358  GPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCH 417

Query: 1957 FALGRNRKLQGLATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDRE 1778
            FALGRNR LQGLA +IVKLW KCEIAKIAVKRG QNTNSE+MA EL RLTGGTL++RDRE
Sbjct: 418  FALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDRE 477

Query: 1777 FIVFYRGKDFLPPAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVAS----E 1610
            FIVFYRGKDFLPPA S AIEERRK+           ST+  + +EP+L      S    +
Sbjct: 478  FIVFYRGKDFLPPAASCAIEERRKHEF---------STSNDSKEEPELGNRHDNSGDNTQ 528

Query: 1609 DEHDVTDYQKKDHLSEQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGP 1430
            DE   T+ QK    SEQ++ RS EV+I+RT+I+LS A                    Q  
Sbjct: 529  DEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQ-Y 587

Query: 1429 EIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSY 1250
            E+DKEGITEEERYMLRKVGLRMK FLL+GRRGVFDGTVENMHLHWK+RELVK+ISK+R  
Sbjct: 588  EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKI 647

Query: 1249 EDVHGAAQTLAAESGGILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSL 1070
            E     A+TL  ESGGILVAVERVNKG+AII+YRGKNYERPA LRP+TLL K+EAMKRSL
Sbjct: 648  EAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSL 707

Query: 1069 EAQRRE 1052
            EAQRR+
Sbjct: 708  EAQRRQ 713



 Score =  226 bits (576), Expect(2) = 0.0
 Identities = 148/332 (44%), Positives = 196/332 (59%), Gaps = 63/332 (18%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKVKE----------------- 880
            SLKLHVLELTRN+++LK QL  DKE NS+++++E  LPL  +E                 
Sbjct: 714  SLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHE 773

Query: 879  -------KQRADSPSINSNDGVDVSKMSLEIIQQDNQIDLSSNYEDETDKLELKSPS--- 730
                   +  AD  S  SND  D +      IQQD Q +  ++ +   + +   + S   
Sbjct: 774  VNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNDFFAEGVASGTSSCPD 833

Query: 729  ---ESVLEHTSL------NGDNGTKQPLVEPS------NKELEPSIHKA----------- 628
               + V+E+ ++      + DN  ++  +E +      N+ +E S   A           
Sbjct: 834  NSMQEVMEYNTIVDAEQCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIG 893

Query: 627  ---IENRSNIRGAPLSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGVAKTIKEHFKKYPL 457
               + N +N R   LSNRDRLLLRKQAL MKKRPVLAVG+SNIVTGVAK IK HF+KYPL
Sbjct: 894  TGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPL 953

Query: 456  AIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGEKP---GKKNTRDG 286
            AIVN+KGRAKGTSVQEVV+KLEEATG VLVSQEPSKVILYRGWGA ++    G++N+R  
Sbjct: 954  AIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAK 1013

Query: 285  ----GEGGVQPSVSPQLMAAIRFECGFESKLE 202
                 +    P+VS +L+AAI+ ECG + + E
Sbjct: 1014 PSIVRDVRPWPAVSRELLAAIKLECGLQGQQE 1045


>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 1076

 Score =  758 bits (1956), Expect(2) = 0.0
 Identities = 426/726 (58%), Positives = 504/726 (69%), Gaps = 31/726 (4%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQFV-PKIPTSQNLKSSKFLV--CSST----TGSE 2978
            +L   +H+P     L  K +  +  P F   K  + QN +     V  CS T    T SE
Sbjct: 2    LLSHYYHNP----ILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSE 57

Query: 2977 TLAN----SAIQRIADKLRSLGYVDETAKQ--TLESEPNH---GSAGEIFIPLPQQLPKH 2825
            T       SAIQRIADKLRSLG V++T  +  TL  EP      +AGEIFIPLP ++PK+
Sbjct: 58   TRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKY 117

Query: 2824 RVGSSIDTSWSTPENPVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAV-----EKVPTXXX 2660
            RVG +ID SWSTPENP+P PG+G+AI R+++L+ +  ++K   + +      ++VPT   
Sbjct: 118  RVGHTIDDSWSTPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAE 177

Query: 2659 XXXXXXXXXXXXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMK 2480
                                       GITEGIVNGIHERWR +EVVKI CEDLCRLNMK
Sbjct: 178  LKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMK 237

Query: 2479 RTHDLLERKTGGLVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDAL---LDHNDAK 2309
            RTHD LERKTGGLVVWRSGS I+LYRG +YKYPYFL DE+S +  S+D L   L  ++  
Sbjct: 238  RTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGL 297

Query: 2308 ERCLPNMAGVKSAE---SSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGL 2138
            +    + +G  SA+    SP NK  Q +LI  VGSP+++R+ +PGEA+L EEAD LLDGL
Sbjct: 298  DETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGL 357

Query: 2137 GPRFTDWWGYEPLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCH 1958
            GPRFTDWWGY+P PVDADLL A VPGYRRPFRLLPYGV+PKLTNDEMT LRRLGRPLPCH
Sbjct: 358  GPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCH 417

Query: 1957 FALGRNRKLQGLATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDRE 1778
            FALGRNR LQGLA +IVKLW KCEIAKIAVKRG QNTNSE+MA EL RLTGGTL++RDRE
Sbjct: 418  FALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDRE 477

Query: 1777 FIVFYRGKDFLPPAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVAS----E 1610
            FIVFYRGKDFLPPA S AIEERRK+           ST+  + +EP+L      S    +
Sbjct: 478  FIVFYRGKDFLPPAASCAIEERRKHEF---------STSNDSKEEPELGNRHDNSGDNTQ 528

Query: 1609 DEHDVTDYQKKDHLSEQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGP 1430
            DE   T+ QK    SEQ++ RS EV+I+RT+I+LS A                    Q  
Sbjct: 529  DEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQ-Y 587

Query: 1429 EIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSY 1250
            E+DKEGITEEERYMLRKVGLRMK FLL+GRRGVFDGTVENMHLHWK+RELVK+ISK+R  
Sbjct: 588  EVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKI 647

Query: 1249 EDVHGAAQTLAAESGGILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSL 1070
            E     A+TL  ESGGILVAVERVNKG+AII+YRGKNYERPA LRP+TLL K+EAMKRSL
Sbjct: 648  EAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSL 707

Query: 1069 EAQRRE 1052
            EAQRR+
Sbjct: 708  EAQRRQ 713



 Score =  224 bits (572), Expect(2) = 0.0
 Identities = 152/358 (42%), Positives = 196/358 (54%), Gaps = 89/358 (24%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKVKE----------------- 880
            SLKLHVLELTRN+++LK QL  DKE NS+++++E  LPL  +E                 
Sbjct: 714  SLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHE 773

Query: 879  -------KQRADSPSINSNDGVDVSKMSLEIIQQDNQIDLSSNYEDETDKLELKSPSESV 721
                   +  AD  S  SND  D +      IQQD Q +  ++     +++E KS  +SV
Sbjct: 774  VNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGISINEIESKSSLKSV 833

Query: 720  LEHTSLN--------------------------------------GDNGTKQPLVEPS-- 661
             + + LN                                       DN  ++  +E +  
Sbjct: 834  SKESQLNMIADFFAEGVASGTSSCPDNSMQEVMEYNTIVDAEQCSSDNEPRESSIESAKS 893

Query: 660  ----NKELEPSIHKA--------------IENRSNIRGAPLSNRDRLLLRKQALMMKKRP 535
                N+ +E S   A              + N +N R   LSNRDRLLLRKQAL MKKRP
Sbjct: 894  RSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRP 953

Query: 534  VLAVGKSNIVTGVAKTIKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEP 355
            VLAVG+SNIVTGVAK IK HF+KYPLAIVN+KGRAKGTSVQEVV+KLEEATG VLVSQEP
Sbjct: 954  VLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEP 1013

Query: 354  SKVILYRGWGAGEKP---GKKNTRDG----GEGGVQPSVSPQLMAAIRFECGFESKLE 202
            SKVILYRGWGA ++    G++N+R       +    P+VS +L+AAI+ ECG + + E
Sbjct: 1014 SKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQGQQE 1071


>gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus guttatus]
          Length = 1040

 Score =  763 bits (1971), Expect(2) = 0.0
 Identities = 422/714 (59%), Positives = 504/714 (70%), Gaps = 19/714 (2%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLI--PQNKKPQ-FVPKIPTSQNLKSSKFLVCSSTTGSETLAN 2966
            MLVPL +     SFLP + I  P ++ P    PK  T   L+    +  +     +TL  
Sbjct: 1    MLVPLCNCNRHFSFLPSQTILKPSSQFPACHYPKF-TFNPLRRRAAICAAIEADRQTLPQ 59

Query: 2965 SAIQRIADKLRSLGYVDETAKQTLE--SEPNHGSAGEIFIPLPQQLPKHRVGSSIDTSWS 2792
            SAI+RIA+KLRSLGYV+++   +    S P   S GEIF+PLP  LPK+R+G ++D SWS
Sbjct: 60   SAIKRIAEKLRSLGYVEDSGNDSASRNSNPGPNSPGEIFVPLPTHLPKYRIGHTLDPSWS 119

Query: 2791 TPENPVPEPGSGSAIRRFHKLSNQA--EKEKLSVRKAVE----KVPTXXXXXXXXXXXXX 2630
            TPENPVPEPGSG+AI+RFH+L      E+EK  +RK  E      P+             
Sbjct: 120  TPENPVPEPGSGNAIQRFHELRRGVLEEEEKERIRKRDEGKRGNSPSLAELKLPPGELRR 179

Query: 2629 XXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLERKT 2450
                             GITEGIVNGIHERWRR+E+VKI CED+CRLNMKRTH+LLE+KT
Sbjct: 180  LRSIGIGLKKKLKVGKAGITEGIVNGIHERWRRTELVKITCEDICRLNMKRTHELLEKKT 239

Query: 2449 GGLVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDALLD-----HNDAKERC--LPN 2291
            GGLVVWRSGS I+LYRG +YKYPYF+ D NS ND+S++   D     H++A E     P+
Sbjct: 240  GGLVVWRSGSNIILYRGSDYKYPYFMAD-NSSNDSSSEESPDMDNDQHSNALESSEESPD 298

Query: 2290 MAGVKSAESSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWG 2111
            +   ++     N + + PSL++GVG P+RVRF +PGEA++  EAD LL+GLGPRFTDWWG
Sbjct: 299  LGSPRTNALESNTQISHPSLVQGVGLPDRVRFQLPGEAEIVAEADSLLEGLGPRFTDWWG 358

Query: 2110 YEPLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKL 1931
             +PLPVDADLLPA+VPGY+RPFRLLPYGV  KLTNDEMT LRRLGRPLP HFALGRNRK 
Sbjct: 359  NDPLPVDADLLPAVVPGYKRPFRLLPYGVNHKLTNDEMTTLRRLGRPLPIHFALGRNRKH 418

Query: 1930 QGLATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKD 1751
            QGLA  IVKLW KCEIAKIAVKRGVQNTNS +MA EL  LTGGTL++RDREFIV YRGKD
Sbjct: 419  QGLAACIVKLWEKCEIAKIAVKRGVQNTNSVLMAEELKWLTGGTLLSRDREFIVLYRGKD 478

Query: 1750 FLPPAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVASE-DEHDVTDYQKKD 1574
            FLP A+SSAI+ERRKY I   K +   + + +  +E +  T E A+E ++H+  D   + 
Sbjct: 479  FLPAAVSSAIQERRKYEIDASKTR-AGNLSNLNEKEHRHGTKEYATEAEQHNEADQNLQ- 536

Query: 1573 HLSEQRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEER 1394
             + E+R+ R +E +++RTS KLSMA                    Q PE DKEGITEEER
Sbjct: 537  -VREKRRVRFSESAMERTSTKLSMALEKKARAEKLLEELAKEESPQPPETDKEGITEEER 595

Query: 1393 YMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAA 1214
            YMLRKVGLRMK FLLLGRRGVFDGTVENMHLHWKYRELVKV    RS E+VHG A+TL A
Sbjct: 596  YMLRKVGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVCIGNRSIEEVHGVARTLEA 655

Query: 1213 ESGGILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            ESGGILVAVERV+KG  IIVYRGKNY RPASLRPQTLL+K+EAMKRSLEAQRRE
Sbjct: 656  ESGGILVAVERVSKGFDIIVYRGKNYTRPASLRPQTLLSKREAMKRSLEAQRRE 709



 Score =  207 bits (526), Expect(2) = 0.0
 Identities = 134/321 (41%), Positives = 185/321 (57%), Gaps = 48/321 (14%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKVKEKQRADSPSINSNDGVDV 829
            SLKLHVL+L++N+DELK ++A D+ TN     E+L L   V+E    D+ + +  + + +
Sbjct: 710  SLKLHVLKLSKNIDELKLKMAKDENTNRPHLTEDLELGF-VRESHETDATNKDPEEPMHI 768

Query: 828  SKMSLEIIQQDNQIDLSS------NYEDETDKLELKSPS------------------ESV 721
            S+ ++ I Q+D   D+S       NY  ET + E++  S                  E V
Sbjct: 769  SEDTVHIAQKDLPGDVSLQSEVKVNYLFETTEAEVQPTSLSNEGNSFSDKNNQIGNMEFV 828

Query: 720  LEHTSLNGDNGTKQPLVEPS------------NKELEPSIHKAIENRSNI---RGAPLSN 586
                S +  N +    + P             N ++EPS  K ++ R ++   R   LSN
Sbjct: 829  RSPRSQDRRNSSPSTYIRPQTGRRKSDGGGYRNVDIEPSGQKPMKERPSLMPSRSVQLSN 888

Query: 585  RDRLLLRKQALMMKKRPVLAVGKSNIVTGVAKTIKEHFKKYPLAIVNIKGRAKGTSVQEV 406
            ++RLLLRKQAL MKK P+LAVGK N+VTGV KTIKEHF+K+PLAIVNIKGRAKGTS QEV
Sbjct: 889  KERLLLRKQALRMKKIPILAVGKRNVVTGVTKTIKEHFEKHPLAIVNIKGRAKGTSAQEV 948

Query: 405  VSKLEEATGGVLVSQEPSKVILYRGWGAGEKPGKKNTRD---------GGEGGVQPSVSP 253
            +  LE++TG VLVSQEPSKVILYRGWG  +   + N R            E   +P +SP
Sbjct: 949  IYNLEQSTGAVLVSQEPSKVILYRGWGF-DTDSESNMRQNQDFKYDSTNKEVKTRPLISP 1007

Query: 252  QLMAAIRFECGFESKLETGST 190
            +L++A+R ECG +   E  +T
Sbjct: 1008 ELISAMRLECGLKPVDEIETT 1028


>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1049

 Score =  770 bits (1987), Expect(2) = 0.0
 Identities = 411/706 (58%), Positives = 501/706 (70%), Gaps = 11/706 (1%)
 Frame = -1

Query: 3136 MLVPLFH-HPSSLSFLPQKLIPQNKKPQFVPKIPTSQNLKSSKFLVCSSTTGSETLANSA 2960
            ML+P  + HP + S       P +      P          +   V +++  +E L  SA
Sbjct: 1    MLLPFCNFHPINPSKTLLNPSPSHSLFSTTPSFSLKPFFPRNTLPVFATSPDTEALPESA 60

Query: 2959 IQRIADKLRSLGYVDE-----TAKQTLESEPNHGSAGEIFIPLPQQLPKHRVGSSIDTSW 2795
            I+RIADKLRSLG+V+E     T +  L S P   S G+IF+PLP QLPK+RVG ++DTSW
Sbjct: 61   IRRIADKLRSLGFVEEPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHTLDTSW 120

Query: 2794 STPENPVPEPGSGSAIRRFHKLSNQ----AEKEKLSVRK-AVEKVPTXXXXXXXXXXXXX 2630
            STPENPVP+PG G++I++FH+L ++     EKE+L  ++   E+ P+             
Sbjct: 121  STPENPVPQPGLGNSIQKFHELRDEFLKEKEKERLKNKEYKKERAPSLAELTLPAEELRR 180

Query: 2629 XXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLERKT 2450
                             GITEGIVNGIHERWRR E+VKI CED+CRLNMKRTH+LLE+KT
Sbjct: 181  LRTVGIALRKKLKIGKAGITEGIVNGIHERWRRMELVKITCEDICRLNMKRTHELLEKKT 240

Query: 2449 GGLVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDALLDHNDAKERCLPNMAGVKSA 2270
            GGLV+WRSGS I+LYRG +YKYPYF  + +  N+++ DA  D     E  + N +G    
Sbjct: 241  GGLVIWRSGSNIILYRGADYKYPYFS-EISFENNSAQDATPDLFMGTEEHMTNSSGTDVV 299

Query: 2269 ESSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWGYEPLPVD 2090
            +   +++ + P +I+GVGSP+RVRF +PGEA+  EEAD LL+GLGPRFTDWWG EPLP+D
Sbjct: 300  KPDASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPID 359

Query: 2089 ADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKLQGLATSI 1910
            ADLLPAIVPGY+RPFRLLPYGVKPKLTNDEMT LRRLGRPLPCHF LGRNRKLQGLA +I
Sbjct: 360  ADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAI 419

Query: 1909 VKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKDFLPPAIS 1730
            VKLW KCEIAK+AVKRGVQNTNSE+MA EL  LTGGTL++RDREFIVFYRGKDFLP A+S
Sbjct: 420  VKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVS 479

Query: 1729 SAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVASEDEHDVTDYQKKDHLSEQRKP 1550
            SAIEERRK     EK+    +++V   +E K  T    S+D H   + QK   + E++K 
Sbjct: 480  SAIEERRKQVFEEEKRNGF-NSSVANAKERKQSTTGSVSDDGHARRNNQK--GVQEKKKL 536

Query: 1549 RSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEERYMLRKVGL 1370
             S E +IKRT+ KL+ A                    Q  ++DKEGITEEER+MLRK+GL
Sbjct: 537  TSMEAAIKRTADKLTTALEKKAEAENLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGL 596

Query: 1369 RMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAAESGGILVA 1190
            RMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVI+  ++ E+VH  A+ L AESGGILVA
Sbjct: 597  RMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKTIEEVHQIARMLEAESGGILVA 656

Query: 1189 VERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            VE VNKGHAIIVYRGKNYERPASLRPQTLL+K+EAMKRS+EAQRR+
Sbjct: 657  VELVNKGHAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQ 702



 Score =  193 bits (491), Expect(2) = 0.0
 Identities = 140/339 (41%), Positives = 186/339 (54%), Gaps = 73/339 (21%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKV----------KEKQRADSP 859
            SLKLHVL+LT+N++ L+++LA ++E   I+S + +   + V            +  + SP
Sbjct: 703  SLKLHVLKLTQNIEALQSRLAKNEEMVHIQSPDIVDRQVPVTGISDAAGGTNYQSSSASP 762

Query: 858  SINSNDGVDVSKMSLEI------------IQQDNQIDLSSNYEDET----DKLELKSPSE 727
            + +S D  + +  S +              QQ+  ID    YE +     D ++ +  S 
Sbjct: 763  TEDSGDAAEDTDPSSQKELSSDSSDTDHNSQQEFPIDPFFQYEGKVEAVGDTIQPEHQSI 822

Query: 726  SVLEHT----SLNGDNGTKQPLVEPS-------------------NKELEPSIHKAIEN- 619
            S ++ +    ++N D  T    V  S                   NK  E    K +   
Sbjct: 823  SSIKESKSMFNVNVDQKTFGSAVSESVSKSSRGEVKIHFSETRSFNKPREVDDKKEVSQL 882

Query: 618  ------------RSNIRGAP-----LSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGVAK 490
                        RS   G P     LSNR+RLLLRKQAL MKK+PVLAVG+SNIVTGVAK
Sbjct: 883  PSVKPQQALRSTRSRSEGMPTRKVQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAK 942

Query: 489  TIKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGEKP 310
             IKEHFKKYPLAIVN+KGRAKGTSV+EVV KLE+ATG VLVSQEPSKVILYRGWG G + 
Sbjct: 943  NIKEHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPGGER 1002

Query: 309  G------KKNTRDGGEGGVQPSVSPQLMAAIRFECGFES 211
            G       +N+R+  E     S+SP+L++AIR ECG +S
Sbjct: 1003 GASNGNDTRNSRNSREQKELMSISPELISAIRLECGLQS 1041


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score =  761 bits (1964), Expect(2) = 0.0
 Identities = 414/692 (59%), Positives = 499/692 (72%), Gaps = 12/692 (1%)
 Frame = -1

Query: 3091 PQKLIPQNKKPQFVPKIPTSQNLKSSKFLVCSSTTGSETLANSAIQRIADKLRSLGYVDE 2912
            P    P +  P  + + P     KSS+FL+   +  SETL  SAIQRIADKLRSLG+ + 
Sbjct: 20   PFTFFPSHFHPTLISRPP-----KSSRFLLRCCSIDSETLPKSAIQRIADKLRSLGFTES 74

Query: 2911 TAKQTLESEPNHGSA-GEIFIPLPQQLPKHRVGSSIDTSWSTPENPVPEPGSGSAIRRFH 2735
              +     +PN  SA G IF+PLP QLPK+RVG +ID+SWS PENPVPEPG+G+AI+RFH
Sbjct: 75   PPEPL--PDPNSPSAPGAIFVPLPNQLPKYRVGHTIDSSWSMPENPVPEPGTGTAIKRFH 132

Query: 2734 KLSNQAEKEK----LSVRKAVEKVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITE 2567
            +L  + +K K    +  +K  E+ P+                              GITE
Sbjct: 133  ELRGEVQKWKKRDGVREKKREERAPSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITE 192

Query: 2566 GIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLERKTGGLVVWRSGSIIVLYRGENYK 2387
            GIVN IHE WRRSEVVKI CEDLCRLNMKRTHDLLERKTGG+VVWRSGS I+LYRG NY 
Sbjct: 193  GIVNTIHEYWRRSEVVKIACEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGPNYI 252

Query: 2386 YPYFLIDENSRNDTSNDAL-LDHND-----AKERCLPNMAGVKSAESSPNNKGTQPSLIK 2225
            YPYF   E   ++ S DAL   H+D       E  L  +   +SA  + + K   P+LI+
Sbjct: 253  YPYFS-HEILEDEGSQDALPASHSDDGGNSETESTLSCINDERSAGPTSSVKMPSPTLIQ 311

Query: 2224 GVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWGYEPLPVDADLLPAIVPGYRRPF 2045
            GVG+PNRVRF +PGEA+LAE+A+ LL+GLGPRF+DWWGY+PLPVDADLLPAIVPGYR+PF
Sbjct: 312  GVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGYRKPF 371

Query: 2044 RLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKLQGLATSIVKLWGKCEIAKIAVK 1865
            RLLPYGVKPKLTNDEMT LRRL RPLPCHFALGRNRKLQGLA SI++LW KCEIAKIAVK
Sbjct: 372  RLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAKIAVK 431

Query: 1864 RGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKDFLPPAISSAIEERRKYAIHREK 1685
            RGVQNTN+++MA EL  LTGGTL++RDREFIV YRGKDFLP A+SSA+E++R   +H  K
Sbjct: 432  RGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMRLHEMK 491

Query: 1684 QKTVCSTAVITTQEPKLRTIEVASEDE-HDVTDYQKKDHLSEQRKPRSTEVSIKRTSIKL 1508
            Q    ++   T Q  KL   E    +E   +T ++K   +SE+RK  S+E S+++TSIKL
Sbjct: 492  QTD--NSPATTGQGLKLEINENGPTNESQSITGWKK--IVSERRKLMSSETSMRKTSIKL 547

Query: 1507 SMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVF 1328
            S+A                   LQ PEIDKEGIT EERYML+KVGLRMKPFLLLGRRGVF
Sbjct: 548  SIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVF 607

Query: 1327 DGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAAESGGILVAVERVNKGHAIIVYR 1148
            DGTVENMHLHWKYRELVK+I+ ERS++ VH  A+TL AESGGILVAVERV +  AII++R
Sbjct: 608  DGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFR 667

Query: 1147 GKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            GKNY+RP+ LRP++LLNKKEA+KRS+EAQRR+
Sbjct: 668  GKNYKRPSRLRPESLLNKKEALKRSIEAQRRK 699



 Score =  179 bits (454), Expect(2) = 0.0
 Identities = 130/332 (39%), Positives = 169/332 (50%), Gaps = 69/332 (20%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLP--------------LKVKEKQR 871
            SLKLHVL+LT+NV+ELK +L  DK    ++S++  T                LK+     
Sbjct: 700  SLKLHVLKLTQNVEELKLKLDEDKRAIGMESIKTSTFQQGKEGIDEIQTTGSLKLVADSA 759

Query: 870  A-----DSPSINSNDGVDVSK-------------MSLEIIQQDNQIDLSSNYEDETDKLE 745
                  +S  +  N+   V K              S+  +Q  N + L  N +     + 
Sbjct: 760  CLTHAENSTCLEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNATVR 819

Query: 744  LKSPSESVLEHTSLNGDNGTKQPLVEPS-----------------------NKELEPSIH 634
                S     H  +  D   +   +EP                        NK+ +PS+ 
Sbjct: 820  PSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVR 879

Query: 633  KAIEN--------RSNIRG------APLSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGV 496
               E         R N  G        LSN++RLLLR+QAL MKK PVL+VGKSN++TGV
Sbjct: 880  LEEEKSPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGV 939

Query: 495  AKTIKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGE 316
            AK IKEHFKK+ LAIVN+KGRAKGTSVQE+V KLE+ATG VLVSQEPSKVILYRGW   +
Sbjct: 940  AKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRGWEEED 999

Query: 315  KPGKKNTRDGGEGGVQPSVSPQLMAAIRFECG 220
            +  +K T     G  + S+S +LMAAIR ECG
Sbjct: 1000 RK-QKATMMKNSGEDRLSMSSELMAAIRIECG 1030


>ref|XP_006408495.1| hypothetical protein EUTSA_v10019986mg [Eutrema salsugineum]
            gi|557109641|gb|ESQ49948.1| hypothetical protein
            EUTSA_v10019986mg [Eutrema salsugineum]
          Length = 998

 Score =  760 bits (1962), Expect(2) = 0.0
 Identities = 407/705 (57%), Positives = 502/705 (71%), Gaps = 10/705 (1%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQF-VPKIPTSQ-NLKSSKFLVCSSTTGSETLANS 2963
            ML+P  ++      +P + +P    P F VPK   S+ +++ +  +V SS +  +TL  S
Sbjct: 1    MLLPPLYYQQQPLIVPPRTLPDRVFPPFLVPKTLISRCHVRRANSVVRSSASDRKTLPQS 60

Query: 2962 AIQRIADKLRSLGYVDETAK-QTLESEPNHGSAGEIFIPLPQQLPKHRVGSSIDTSWSTP 2786
            AIQRIADKLRSLG+ +E    +T   E  + S GEIF+PLP QLP HRVG +IDTSWSTP
Sbjct: 61   AIQRIADKLRSLGFAEEKHDTKTTGEESGNNSPGEIFVPLPNQLPIHRVGHTIDTSWSTP 120

Query: 2785 ENPVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAVEKVPTXXXXXXXXXXXXXXXXXXXXX 2606
              PVP+PGSG+AI R+H+L    +KEK   RK  EKVP+                     
Sbjct: 121  SYPVPKPGSGTAISRYHELKRVWKKEKKVERKNEEKVPSLAELTLPPAELRRLRSAGIRL 180

Query: 2605 XXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLERKTGGLVVWRS 2426
                     GITEGIVNGIHERWR +EVVKI CED+ R+NMKRTHD+LE KTGGLV+WRS
Sbjct: 181  TKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVIWRS 240

Query: 2425 GSIIVLYRGENYKYPYFLIDENSRNDTSNDALLDHNDAKERCLPNMAGVKSAESSP---N 2255
            GS I+LYRG NY+YPYF+ D++  +D+S +     +   +  + +     +A+SSP   +
Sbjct: 241  GSKILLYRGVNYQYPYFVSDQDLAHDSSVETASGASSMIQGVVDSRDKQSTAQSSPTSIS 300

Query: 2254 NKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWGYEPLPVDADLLP 2075
            NK  +P L++GVGSP++VRF +PGE QL EEAD LL+GLGPRFTDWW Y+PLPVDADLLP
Sbjct: 301  NKMIKPLLMQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPLPVDADLLP 360

Query: 2074 AIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKLQGLATSIVKLWG 1895
            AIVP YRRPFRLLPYG+ PKLT+DEMT LRRLGRPLPCHFALGRNR LQGLA +IVKLW 
Sbjct: 361  AIVPEYRRPFRLLPYGLSPKLTDDEMTTLRRLGRPLPCHFALGRNRNLQGLAVAIVKLWE 420

Query: 1894 KCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKDFLPPAISSAIEE 1715
            KCE+ KIAVKRGVQNTNSE+MA EL  LTGGTLI+RD++FIV YRGKDFLP A+SSAIEE
Sbjct: 421  KCEVVKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPSAVSSAIEE 480

Query: 1714 RRKYAIHREKQKTVCSTAVITTQEPKLRTIEVASEDEHDVTDYQKKDHL-SEQRKPR--- 1547
            RR+  +  EK     +   +T  E +++  +  ++D     +Y KKDH+ + Q KPR   
Sbjct: 481  RRRQTMIMEKSSVHGNK--LTKNEKEIQP-QAPTDDIEPAAEY-KKDHVQTHQMKPRQRK 536

Query: 1546 STEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEERYMLRKVGLR 1367
            S E S++RTSIKLSMA                    Q  +IDKEGIT++E+YMLRK+GL+
Sbjct: 537  SPEASLERTSIKLSMALEKKANAEKILAELENRESPQQSDIDKEGITDDEKYMLRKIGLK 596

Query: 1366 MKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAAESGGILVAV 1187
            MKPFLLLGRRGVFDGT+ENMHLHWKYRELVK+I  E+S E     A+ L AESGGILVAV
Sbjct: 597  MKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEKSIESAREVAEILEAESGGILVAV 656

Query: 1186 ERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            E V+KG+AIIVYRGKNYERP  LRPQTLL+K+EA+KRS+EAQRR+
Sbjct: 657  EMVSKGYAIIVYRGKNYERPPCLRPQTLLSKREALKRSVEAQRRK 701



 Score =  178 bits (452), Expect(2) = 0.0
 Identities = 120/295 (40%), Positives = 164/295 (55%), Gaps = 32/295 (10%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETN--------SIKSLEELTLPLKVKEKQRADSPSI 853
            SLKLHVL+L+ N++EL  QL  D  TN        S +  +E T   +++    +D   +
Sbjct: 702  SLKLHVLKLSDNIEELNRQLVKDSATNATWSDGESSNRMFQEETANQQIELGNSSDPRVL 761

Query: 852  NSNDGVDVSKMSLEIIQQDNQIDLSSNYEDETDKL----ELKSPSESVLEHTSLNGDNGT 685
            +S +       S E  + ++    S  + +  D      E  S   S     S+  ++  
Sbjct: 762  SSGEESCEDDSSHEDREDESGSGSSQRHGNSLDSTAVLGETGSAEASSFHDRSMPRNSFL 821

Query: 684  KQPLVEPSNKELEPS------IHKAIENRSNIRG--APLSNRDRLLLRKQALMMKKRPVL 529
                  P+ +EL  S      I    E++S   G  A LSNR+RL+LRKQAL MKKRP  
Sbjct: 822  NAERKVPTGQELGFSTGSGSRISALTESKSEKDGLVADLSNRERLILRKQALKMKKRPPF 881

Query: 528  AVGKSNIVTGVAKTIKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSK 349
            AVG+SN+VTG+AKT+K HF++ PLAIVN+KGRAKGTSVQEV++KL+E TG +LVSQEPSK
Sbjct: 882  AVGRSNVVTGLAKTLKIHFERNPLAIVNVKGRAKGTSVQEVIAKLKEETGALLVSQEPSK 941

Query: 348  VILYRGWGAGEKPGKKNTRDGGEGGVQ------------PSVSPQLMAAIRFECG 220
            VILYRGWGA E+       +  +  +             P VSP L+ AI+ ECG
Sbjct: 942  VILYRGWGAEEEMKSFYPNNNVKNSINLTSHSKRFVKDPPPVSPALIQAIKLECG 996


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 1053

 Score =  757 bits (1955), Expect(2) = 0.0
 Identities = 412/671 (61%), Positives = 493/671 (73%), Gaps = 13/671 (1%)
 Frame = -1

Query: 3025 LKSSKFLVCSSTTGSETLANSAIQRIADKLRSLGYVDETAKQTLESEPNHGSA-GEIFIP 2849
            LKSS+FL+   +  SETL  SAIQRIADKLRSLG+ + T +     +PN  SA G IF+P
Sbjct: 57   LKSSRFLLRCCSIDSETLPKSAIQRIADKLRSLGFTEXTPRTL--PDPNSPSAPGAIFVP 114

Query: 2848 LPQQLPKHRVGSSIDTSWSTPENPVPEPGSGSAIRRFHKLSNQAEKEK----LSVRKAVE 2681
            LP QLPK+RVG +ID+SWSTPENPVPEPG+G+AI+RFH+L  + +K K    +  +K  E
Sbjct: 115  LPNQLPKYRVGHTIDSSWSTPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREE 174

Query: 2680 KVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECED 2501
            + P+                              GITEGIVN IHE WRRSEVVKI CED
Sbjct: 175  RAPSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACED 234

Query: 2500 LCRLNMKRTHDLLERKTGGLVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDAL-LD 2324
            LCRLNMKRTHDLLERKTGG+VVWRSGS I+LYRG NY YPYF   E   ++ S DAL   
Sbjct: 235  LCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGPNYIYPYFS-HEILEDEGSQDALPAS 293

Query: 2323 HND-----AKERCLPNMAGVKSAESSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEA 2159
            H+D       E  L  +   +SA  +   K   P+LI+GVG+PNRVRF +PGEA+LAE+A
Sbjct: 294  HSDDGGNSETESTLSCINDERSAGPTSYVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDA 353

Query: 2158 DHLLDGLGPRFTDWWGYEPLPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRL 1979
            + LL+GLGPRF+DWWGY+PLPVDADLLPAIVPGYR+PFRLLPYGVKPKLTNDEMT LRRL
Sbjct: 354  ESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRL 413

Query: 1978 GRPLPCHFALGRNRKLQGLATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGT 1799
             RPLPCHFALGRNRKLQGLA SI++LW KCEIAKIAVKRGVQNTN+++MA EL  LTGGT
Sbjct: 414  ARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGT 473

Query: 1798 LIARDREFIVFYRGKDFLPPAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEV 1619
            L++RDREFIV YRGKDFLP A+SSA+E++R   +H  KQ    ++   T Q  KL   E 
Sbjct: 474  LLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMRLHEMKQTD--NSPATTGQGLKLEINEN 531

Query: 1618 ASEDE-HDVTDYQKKDHLSEQRKPRSTEVSIKRTSIKLS-MAXXXXXXXXXXXXXXXXXX 1445
               +E   +T ++K   +SE+RK  S+E S+++TSIKLS +                   
Sbjct: 532  GPTNESQSITGWKK--IVSERRKLMSSETSMRKTSIKLSIVCIRKKAKAEEFLAKLEEEE 589

Query: 1444 XLQGPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVIS 1265
             LQ PEIDKEGIT EERYML+KVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVK+I+
Sbjct: 590  KLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIIT 649

Query: 1264 KERSYEDVHGAAQTLAAESGGILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEA 1085
             ERS++ VH  A+TL AESGGILVAVERV +  AII++RGKNY+RP+ LRP++LLNKKEA
Sbjct: 650  NERSFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEA 709

Query: 1084 MKRSLEAQRRE 1052
            +KRS+EAQRR+
Sbjct: 710  LKRSIEAQRRK 720



 Score =  179 bits (455), Expect(2) = 0.0
 Identities = 132/332 (39%), Positives = 171/332 (51%), Gaps = 69/332 (20%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTL-PLK--VKEKQRA---------- 868
            SLKLHVL+LT+NV+ELK +L  DK    ++S++  T  P K  + E Q            
Sbjct: 721  SLKLHVLKLTQNVEELKLKLDEDKRAIGMESIKTSTFQPGKEGIDEIQTTGSLKLVADSA 780

Query: 867  ------DSPSINSNDGVDVSK-------------MSLEIIQQDNQIDLSSNYEDETDKLE 745
                  +S  +  N+   V K              S+  +Q  N + L  N +     + 
Sbjct: 781  CLTHAENSTCLEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNATVR 840

Query: 744  LKSPSESVLEHTSLNGDNGTKQPLVEPS-----------------------NKELEPSIH 634
                S     H  +  D   +   +EP                        NK+ +PS+ 
Sbjct: 841  PSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVR 900

Query: 633  KAIEN--------RSNIRG------APLSNRDRLLLRKQALMMKKRPVLAVGKSNIVTGV 496
               E         R N  G        LSN++RLLLR+QAL MKK PVL+VGKSN++TGV
Sbjct: 901  LEEEKSPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGV 960

Query: 495  AKTIKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGWGAGE 316
            AK IKEHFKK+ LAIVN+KGRAKGTSVQE+V KLE+ATG VLVSQEPSKVILYRGW   +
Sbjct: 961  AKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRGWEEED 1020

Query: 315  KPGKKNTRDGGEGGVQPSVSPQLMAAIRFECG 220
            +  +K T     G  + S+S +LMAAIR ECG
Sbjct: 1021 RK-QKATMMKNSGEDRLSMSSELMAAIRIECG 1051


>ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 1019

 Score =  738 bits (1904), Expect(2) = 0.0
 Identities = 406/710 (57%), Positives = 488/710 (68%), Gaps = 15/710 (2%)
 Frame = -1

Query: 3136 MLVPLFH-HPSSLSFLPQKLIPQNKKPQFVPKIPTSQNLKSSKFLVCSSTTGSETLANSA 2960
            ML+P  H H  + S+ P    P++K         T     SSKF+   S + S TL  SA
Sbjct: 1    MLLPATHFHTFTSSYSPFLFFPKSK---------TLTLTHSSKFIFRISASKSRTLPESA 51

Query: 2959 IQRIADKLRSLGYVDE---TAKQTLESEPNHGSAGEIFIPLPQQLPKHRVGSSIDTSWST 2789
            IQRIADKL+SLG   E   T K T+ +      AGEIF+PLP  LPK+RVG ++D SWST
Sbjct: 52   IQRIADKLQSLGITTEQSTTTKNTISTT----IAGEIFVPLPHNLPKYRVGHTLDPSWST 107

Query: 2788 PENPVPEPGSGSAIRRFHKLS-NQAEKEKLSVRKAVE----KVPTXXXXXXXXXXXXXXX 2624
            PENPVP PG+G       KLS N+ E+++L   KA E    +VPT               
Sbjct: 108  PENPVPFPGAG-----IEKLSENEVERQRLERAKAREEKKRRVPTLAELSLTDGEIMRLT 162

Query: 2623 XXXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLERKTGG 2444
                           GITEGIVNGIHERWRRSEVV+I CEDLCR+NMKRTHD+LERKTGG
Sbjct: 163  KLGFEMKQKIKVGKAGITEGIVNGIHERWRRSEVVRIVCEDLCRINMKRTHDILERKTGG 222

Query: 2443 LVVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDALL-----DHN-DAKERCLPNMAG 2282
            LVVWRSGS I+LYRG +YKYPYFL D+  R+D  +DAL      D N D +E     M  
Sbjct: 223  LVVWRSGSKIILYRGIDYKYPYFLSDKVLRDDKIDDALQHMDGDDKNCDERESYSSEMNS 282

Query: 2281 VKSAESSPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWGYEP 2102
               A  S N +  +P+L++GVG+PN+VRF +PGEA+L EE D LL+GLGPRFTDWWGY+P
Sbjct: 283  TTHASHSSNIRTVKPALVQGVGTPNKVRFQLPGEAELLEEVDSLLEGLGPRFTDWWGYDP 342

Query: 2101 LPVDADLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKLQGL 1922
            +PVDADLLPA++PG+R+PFRLLPYGVK  LT+DE+T L+RLGRPLPCHFALGRNRKLQGL
Sbjct: 343  VPVDADLLPAVIPGFRQPFRLLPYGVKSNLTDDELTTLKRLGRPLPCHFALGRNRKLQGL 402

Query: 1921 ATSIVKLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKDFLP 1742
            A +I+KLW +CEIAKIAVKRGVQNT+++IMA E+  LTGGTL++RD++ IV YRGKDFLP
Sbjct: 403  AAAIIKLWERCEIAKIAVKRGVQNTSNKIMAEEIKHLTGGTLLSRDKDVIVIYRGKDFLP 462

Query: 1741 PAISSAIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVASEDEHDVTDYQKKDHLSE 1562
             A SSAI++RR   I++ K +   S  V    E K    ++A         + K   + E
Sbjct: 463  AAASSAIQQRRNVLINKVKAENSSSVTVSPHSEAK----DMA---------FLKDTEIIE 509

Query: 1561 QRKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEERYMLR 1382
            +R     + +IKRTSIKLS A                    Q  EIDKEGITEEERYMLR
Sbjct: 510  KRIMTKAKAAIKRTSIKLSQALEKKAKAEKLLAILEKVESPQEQEIDKEGITEEERYMLR 569

Query: 1381 KVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAAESGG 1202
            ++GL+MKPFLLLGRRGVFDGTVENMHLHWKYRELVK+I  + S E VH  A TL AESGG
Sbjct: 570  RIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICNQGSLESVHQTALTLEAESGG 629

Query: 1201 ILVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            ILVAVERV+KGHAIIVYRGKNY RP+ LRP+TLLNKK+A+KRS+EAQRRE
Sbjct: 630  ILVAVERVSKGHAIIVYRGKNYSRPSCLRPRTLLNKKQALKRSIEAQRRE 679



 Score =  196 bits (498), Expect(2) = 0.0
 Identities = 135/340 (39%), Positives = 182/340 (53%), Gaps = 75/340 (22%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQ------------------LAVDKETNSIKSLE-ELTLPLKV 886
            +LKLHVL+L +N++ELK Q                  LA+DK   S  S+         V
Sbjct: 680  ALKLHVLKLDKNINELKLQMVKDEASSKQIAETLRSDLAIDKHGGSSNSINCNSPKEASV 739

Query: 885  KEKQRADSPSINSNDGVDVSKMSLEIIQQ---DNQ--------IDL----SSNYEDETDK 751
              +Q  +   I   DGV  + ++    ++   DNQ        I+L    SSN     ++
Sbjct: 740  HNQQAIEEQHIELIDGVSSNSLNCNSSKEASVDNQQQAIEEQHIELIDGASSNLISSPEE 799

Query: 750  LELKSPSESVLEHTSLNGDNGTKQPLVEPS--------------------------NKEL 649
              + +      ++  L    G +Q   E S                          NK +
Sbjct: 800  ASVGNQRAIQEQYIELIDTGGARQGEPESSAGLVHQERQLDEESDSVVDTGHCVSNNKAM 859

Query: 648  EPSIHKA---------IENRSNI----RGAPLSNRDRLLLRKQALMMKKRPVLAVGKSNI 508
            E S+            + N+S+I    R   LSNR+RLLLR+QAL MKKRP+LA+GKSN 
Sbjct: 860  EASVASLKSDPEPSAPVINKSSIELPSRSLYLSNRERLLLRRQALNMKKRPLLAIGKSNT 919

Query: 507  VTGVAKTIKEHFKKYPLAIVNIKGRAKGTSVQEVVSKLEEATGGVLVSQEPSKVILYRGW 328
            VTG+AK IK+HF+K+P  IVN+KGRAKGTSV E+VSKLE ATG VLVSQEPSK+ILYRGW
Sbjct: 920  VTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSKLEHATGAVLVSQEPSKIILYRGW 979

Query: 327  GAGEKPGK--KNTRDGGEGGVQPSVSPQLMAAIRFECGFE 214
            GAG KPG    +++ G +GG +P+VSP+L+ AIR ECG +
Sbjct: 980  GAGTKPGTYLNDSKLGKDGGAKPTVSPELLEAIRIECGLQ 1019


>ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Capsella rubella]
            gi|482565458|gb|EOA29647.1| hypothetical protein
            CARUB_v10015149mg [Capsella rubella]
          Length = 1021

 Score =  750 bits (1936), Expect(2) = 0.0
 Identities = 403/709 (56%), Positives = 495/709 (69%), Gaps = 14/709 (1%)
 Frame = -1

Query: 3136 MLVPLFHHPSSLSFLPQKLIPQNKKPQF-VPKIPTSQ-NLK-SSKFLVCSSTTGSETLAN 2966
            MLVPL+H          K  P    P F +P+   S+ N++ ++ F+V SS++  +TL  
Sbjct: 1    MLVPLYHQQQQPLITLPKTFPDRTFPPFPIPQTLISRCNVRRANSFVVRSSSSDRKTLPQ 60

Query: 2965 SAIQRIADKLRSLGYVDET----AKQTLESEPNHGSAGEIFIPLPQQLPKHRVGSSIDTS 2798
            SAIQRIA+KLRSLG+V+E     A+ T   E    S GEIF+PLP+QLP +RVG +IDTS
Sbjct: 61   SAIQRIAEKLRSLGFVEENHESPARNTTGVEYGKNSPGEIFVPLPKQLPINRVGHTIDTS 120

Query: 2797 WSTPENPVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAVEKVPTXXXXXXXXXXXXXXXXX 2618
            WSTP  PVP PGSG+AI R+H+L    +KE    RK  EKVP+                 
Sbjct: 121  WSTPSYPVPNPGSGTAISRYHELKRVWKKETEIERKKQEKVPSLAELTLPAAELRRLRSA 180

Query: 2617 XXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLERKTGGLV 2438
                         GITEGIVNGIHERWR +EVVKI CED+ R+NMKRTHD+LE KTGGLV
Sbjct: 181  GIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIVCEDISRMNMKRTHDVLETKTGGLV 240

Query: 2437 VWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDALLDHNDAKERCLPNMAGVKSAESSP 2258
            +WRSGS I+LYRG NY+YPYF+ D +  +D+S +     +   +  + +     +AESS 
Sbjct: 241  IWRSGSKILLYRGVNYQYPYFVSDRDLGHDSSVETASGGSSMDQEVVDSRDKQSTAESSS 300

Query: 2257 ---NNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWGYEPLPVDA 2087
                +K  +P LI+GVGSP++VRF +PGE QL EEAD LL+GLGPRFTDWW Y+PLPVD 
Sbjct: 301  LSVTSKTVKPLLIQGVGSPDKVRFQLPGEVQLVEEADQLLEGLGPRFTDWWAYDPLPVDG 360

Query: 2086 DLLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKLQGLATSIV 1907
            DLLPA+VP YRRPFRLLPYGV PKLT+DEMT +RRLGRPLPCHFALGRNR LQGLA +IV
Sbjct: 361  DLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIV 420

Query: 1906 KLWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKDFLPPAISS 1727
            KLW KCE+AKIAVKRGVQNTNSE+MA EL  LTGGTLI+RD++FIV YRGKDFLP A+SS
Sbjct: 421  KLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPFAVSS 480

Query: 1726 AIEERRKYAIHREKQKTVCSTAVITTQEPKLRTIEVASEDEHDVTDYQKKDHLS----EQ 1559
            AIEERR+  +  E      +   +T  E  ++      + E +  +Y KKDH+     + 
Sbjct: 481  AIEERRRQTMIMENSSAHGNK--MTKNEDVIKPQAATDDTELEEAEY-KKDHVQTHHMKS 537

Query: 1558 RKPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEERYMLRK 1379
            R+ +S E  +++TSIKLSMA                    Q   IDKEGIT++E+YMLRK
Sbjct: 538  RQRKSPEAILEKTSIKLSMALEKKANAEKILAELESRESPQQSNIDKEGITDDEKYMLRK 597

Query: 1378 VGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAAESGGI 1199
            +GL+MKPFLLLGRRGVFDGT+ENMHLHWKYRELVK+I  E S E  H  A+ L AESGGI
Sbjct: 598  IGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEHSIEAAHEVAEILEAESGGI 657

Query: 1198 LVAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            LVAVE V+KG+AIIVYRGKNYERP+ LRPQTLL+K+EA+KRS+EAQRR+
Sbjct: 658  LVAVEMVSKGYAIIVYRGKNYERPSCLRPQTLLSKREALKRSVEAQRRK 706



 Score =  181 bits (460), Expect(2) = 0.0
 Identities = 125/315 (39%), Positives = 172/315 (54%), Gaps = 50/315 (15%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEELTLPLKVKEKQRADSPSINSND---- 841
            SLKLHVL+L+ N+DEL  QL  D  TN  +S  E ++ +  + + +   P  +S +    
Sbjct: 707  SLKLHVLKLSNNIDELNRQLVEDSVTNETRSDGESSMRMVEETENQLIEPENSSEEIELG 766

Query: 840  ---GVDVSKMSLEIIQQDNQIDL----SSNYEDETDKLELKSPSE----------SVLEH 712
                + VS    E  + DN+ ++    +S++E + D+  L    E          SVL  
Sbjct: 767  YSSELSVSSSGEENWEDDNEGEVDSFTTSSHEHQEDEPGLSQRHEGNALDSTANISVLVE 826

Query: 711  T-SLNGDNGTKQPLVEPSNKELEPSIHKA---------------IENRSNIRG--APLSN 586
            T S    +   + + + S    E  + K                 E +S   G  A LSN
Sbjct: 827  TGSAKASSFHDRSMPQKSFLHTERKVPKQELGSSTGSGSRVSALTERKSKNDGLVADLSN 886

Query: 585  RDRLLLRKQALMMKKRPVLAVGKSNIVTGVAKTIKEHFKKYPLAIVNIKGRAKGTSVQEV 406
            R+RL+LRKQAL MKKRP  AVG+SN+VTG+A+T+K HF+K PLAIVN+KGRA+GTSVQEV
Sbjct: 887  RERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRAEGTSVQEV 946

Query: 405  VSKLEEATGGVLVSQEPSKVILYRGWGAGEKPGKKNTRDGGEGGVQ-----------PSV 259
            ++KL+E TG +LVSQEPSKVILYRGWGA E+          +  +            P V
Sbjct: 947  IAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNSNVKNSINLTSSKSFVDDPPPV 1006

Query: 258  SPQLMAAIRFECGFE 214
            SP L+ AIR ECG +
Sbjct: 1007 SPALIEAIRLECGLQ 1021


>ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1|
            unknown protein [Arabidopsis thaliana]
            gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis
            thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2
            [Arabidopsis thaliana]
          Length = 1011

 Score =  745 bits (1924), Expect(2) = 0.0
 Identities = 400/708 (56%), Positives = 490/708 (69%), Gaps = 13/708 (1%)
 Frame = -1

Query: 3136 MLVPLFHHPSSL--SFLPQKLIPQNKKPQFVPKIPTSQN--LKSSKFLVCSSTTGSETLA 2969
            ML+PLFH    +     P ++ P    P  VP    S+    +++  + CSS +G +TL 
Sbjct: 1    MLLPLFHQQPLILAKTFPDRIFP----PFLVPNTLVSRRNVSRANSGIFCSSASGRKTLP 56

Query: 2968 NSAIQRIADKLRSLGYVDET----AKQTLESEPNHGSAGEIFIPLPQQLPKHRVGSSIDT 2801
             SAIQRIA+KLRSLG+V+E      ++    E    S GEIF+PLP+QLP HRVG +IDT
Sbjct: 57   QSAIQRIAEKLRSLGFVEEKHDSPTRRITGEESGKNSPGEIFVPLPKQLPIHRVGHTIDT 116

Query: 2800 SWSTPENPVPEPGSGSAIRRFHKLSNQAEKEKLSVRKAVEKVPTXXXXXXXXXXXXXXXX 2621
            SWSTP  PVP+PGSG+AI R+H+L    +KE    RK  EKVP+                
Sbjct: 117  SWSTPSYPVPKPGSGTAISRYHELKRVWKKETEMERKKEEKVPSLAELTLPPAELRRLRT 176

Query: 2620 XXXXXXXXXXXXXXGITEGIVNGIHERWRRSEVVKIECEDLCRLNMKRTHDLLERKTGGL 2441
                          GITEGIVNGIHERWR +EVVKI CED+ R+NMKRTHD+LE KTGGL
Sbjct: 177  VGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGL 236

Query: 2440 VVWRSGSIIVLYRGENYKYPYFLIDENSRNDTSNDAL-LDHNDAKERCLPNMAGVKSAES 2264
            V+WRSGS I+LYRG NY+YPYF+ D +  ++ ++ A  +D      R   ++A  +S+  
Sbjct: 237  VIWRSGSKILLYRGVNYQYPYFVSDRDLAHEAASGASSMDQGVVDSREKQSIA--ESSAP 294

Query: 2263 SPNNKGTQPSLIKGVGSPNRVRFIMPGEAQLAEEADHLLDGLGPRFTDWWGYEPLPVDAD 2084
            S  NK  +P L +GVGSP++VRF +PGE QL EEAD LL+GLGPRFTDWW Y+PLPVD D
Sbjct: 295  SITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPLPVDGD 354

Query: 2083 LLPAIVPGYRRPFRLLPYGVKPKLTNDEMTILRRLGRPLPCHFALGRNRKLQGLATSIVK 1904
            LLPA+VP YRRPFRLLPYGV PKLT+DEMT +RRLGRPLPCHFALGRNR LQGLA +IVK
Sbjct: 355  LLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIVK 414

Query: 1903 LWGKCEIAKIAVKRGVQNTNSEIMAGELARLTGGTLIARDREFIVFYRGKDFLPPAISSA 1724
            LW KCE+AKIAVKRGVQNTNSE+MA EL  LTGGTLI+RD++FIV YRGKDFLP A+SSA
Sbjct: 415  LWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPSAVSSA 474

Query: 1723 IEERRKYAIHREKQKTVCSTAVITTQEPKLRT----IEVASEDEHDVTDYQKKDHLSEQR 1556
            IEERR+  +  E      +      +E K R     IE+ ++D+ D      + H  + R
Sbjct: 475  IEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKEDIELEAKDQKD----HIQTHQMKSR 530

Query: 1555 KPRSTEVSIKRTSIKLSMAXXXXXXXXXXXXXXXXXXXLQGPEIDKEGITEEERYMLRKV 1376
            +  S E  +++TS+KLSMA                    Q  +IDKEGIT +E+YMLRK+
Sbjct: 531  QRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEKYMLRKI 590

Query: 1375 GLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVISKERSYEDVHGAAQTLAAESGGIL 1196
            GL+MKPFLLLGRRGVFDGT+ENMHLHWKYRELVK+I  E S E  H  A+ L AESGGIL
Sbjct: 591  GLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGIL 650

Query: 1195 VAVERVNKGHAIIVYRGKNYERPASLRPQTLLNKKEAMKRSLEAQRRE 1052
            VAVE V+KG+AIIVYRGKNYERP  LRPQTLL+K+EA+KRS+EAQRR+
Sbjct: 651  VAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQRRK 698



 Score =  176 bits (445), Expect(2) = 0.0
 Identities = 125/314 (39%), Positives = 159/314 (50%), Gaps = 51/314 (16%)
 Frame = -2

Query: 1008 SLKLHVLELTRNVDELKTQLAVDKETNSIKSLEEL-------------TLPLKVKEKQRA 868
            SLKLHVL+L+ N++EL  QL  D  TN   S  E              T P K +EK   
Sbjct: 699  SLKLHVLKLSNNIEELNRQLVEDSATNETWSDGESSNMMVEEETENQHTEPEKAREKIEL 758

Query: 867  DSPSI-------------NSNDGVDVSKMSLEIIQQD------------NQIDLSSNYE- 766
               S              +S   VD    S +  Q+D            N +D ++N   
Sbjct: 759  GYSSDLSVPSSGEENWEDDSEGEVDPLTTSSQEYQEDESESASSQRHEGNSLDSTANLSV 818

Query: 765  -DETDKLELKSPSESVLEHTSLNGDNGTKQPLVEPSNKELEPSIHKAIENRSNIRGAPLS 589
              ET      S  +  L H S    N         S  ++     +  EN   +    LS
Sbjct: 819  FAETGSANASSFHDRSLPHNSFLNANRKLPGSSTGSGSQISALRERKSENDGLV--TDLS 876

Query: 588  NRDRLLLRKQALMMKKRPVLAVGKSNIVTGVAKTIKEHFKKYPLAIVNIKGRAKGTSVQE 409
            NR+RL+LRKQAL MKKRP  AVG+SN+VTG+A+T+K HF+K PLAIVN+KGRA GTSVQE
Sbjct: 877  NRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQE 936

Query: 408  VVSKLEEATGGVLVSQEPSKVILYRGWGAGEKPGKKNTRDGGEGGVQ-----------PS 262
            V++KL+E TG +LVSQEPSKVILYRGWGA E+       +  +  +            P 
Sbjct: 937  VIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNNNVKSSINLPSTRSFVDDPPH 996

Query: 261  VSPQLMAAIRFECG 220
            VSP L+ AIR ECG
Sbjct: 997  VSPALIEAIRLECG 1010