BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00008414
         (2245 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation spec...   991   0.0  
emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]   986   0.0  
ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation spec...   969   0.0  
ref|XP_006471216.1| PREDICTED: cleavage and polyadenylation spec...   967   0.0  
ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citr...   967   0.0  
ref|XP_007042279.1| Cleavage and polyadenylation specificity fac...   965   0.0  
gb|EXC33626.1| Cleavage and polyadenylation specificity factor s...   960   0.0  
ref|XP_006431751.1| hypothetical protein CICLE_v10000467mg [Citr...   950   0.0  
ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation spec...   948   0.0  
ref|XP_006300311.1| hypothetical protein CARUB_v10019868mg [Caps...   944   0.0  
ref|XP_002323823.2| hypothetical protein POPTR_0017s11240g [Popu...   942   0.0  
gb|AAL66977.1| putative cleavage and polyadenylation specificity...   940   0.0  
ref|NP_176297.1| cleavage and polyadenylation specificity factor...   940   0.0  
ref|XP_002886569.1| hypothetical protein ARALYDRAFT_475225 [Arab...   940   0.0  
ref|XP_002323824.2| cleavage and polyadenylation specificity fac...   939   0.0  
ref|XP_004485469.1| PREDICTED: cleavage and polyadenylation spec...   939   0.0  
ref|XP_003540154.1| PREDICTED: cleavage and polyadenylation spec...   931   0.0  
gb|EYU26513.1| hypothetical protein MIMGU_mgv1a002259mg [Mimulus...   930   0.0  
ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group] g...   926   0.0  
gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indi...   926   0.0  

>ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like [Vitis vinifera]
          Length = 694

 Score =  991 bits (2563), Expect = 0.0
 Identities = 511/694 (73%), Positives = 566/694 (81%), Gaps = 13/694 (1%)
 Frame = +1

Query: 22   AMAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSG 201
            A  G P SLKR +SS+TREGDQLI+TPLGAGNEVGRSCVYMSYKGKT+LFDCGIHPAYSG
Sbjct: 2    ASTGPPQSLKRPDSSLTREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSG 61

Query: 202  IGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSD 381
            + ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+FKGRVFMTHATKAIYKLLLSD
Sbjct: 62   MAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSD 121

Query: 382  YVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDI 561
            YVKVSK S EDMLYDEQDIL SMDKIEVIDFHQTLEVNGIRFWCY AGHVLGAAMFMVDI
Sbjct: 122  YVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDI 181

Query: 562  DSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKT 741
              +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ +H REKRFTDVIH T
Sbjct: 182  AGVRVLYTGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIHST 241

Query: 742  ISQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSM 921
            ISQGGRVLIP              DEYWSNHPELH+IPIYYAS LAKRCM VYQTYINSM
Sbjct: 242  ISQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINSM 301

Query: 922  NVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKR 1101
            N RIRNQ A SNPF FKHI  L SIENF DVGPSVVMASP GLQSG SRQLFD WC DK+
Sbjct: 302  NERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLSRQLFDMWCSDKK 361

Query: 1102 NACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDEL 1281
            NAC+I G  VEGTLAKTI+++P EVT          M +H ISFSAHADF QTS FL EL
Sbjct: 362  NACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKEL 421

Query: 1282 DPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAE 1455
             P NIILVHGE+ EMGRLK+KLI + +  N KI SPKNC+ V++Y  S+++AK IG LAE
Sbjct: 422  MPPNIILVHGEANEMGRLKQKLITQFADRNTKIISPKNCQSVEMYFNSEKMAKTIGRLAE 481

Query: 1456 KTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHR 1623
            KT   P VGE VSGLLVKK  +YQ+MAPDDL V    ST ++TQRITIPY+G F VIKHR
Sbjct: 482  KT---PGVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYTGAFGVIKHR 538

Query: 1624 VKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILN 1788
            +KQIY SVESL D E     F VH+RVTV+ ESEKHI L WTSDP SDMVSDSIVAL+LN
Sbjct: 539  LKQIYESVESLPDEESEVPAFRVHERVTVKHESEKHISLHWTSDPISDMVSDSIVALVLN 598

Query: 1789 MNREMIHKVVVNES--KEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILD 1962
            ++RE+   VV +E+   EE+  K+AEKVIH +LVSLFGDVK+G  G +VI+VD NVA LD
Sbjct: 599  ISREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISVDGNVAHLD 658

Query: 1963 KESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            K+SG VESENEGLKERVRVAF++IQ A+KPIPLS
Sbjct: 659  KQSGNVESENEGLKERVRVAFQRIQNAVKPIPLS 692


>emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]
          Length = 687

 Score =  986 bits (2548), Expect = 0.0
 Identities = 508/687 (73%), Positives = 563/687 (81%), Gaps = 13/687 (1%)
 Frame = +1

Query: 43   SLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGIGALPFF 222
            SLKR +SS+TREGDQLI+TPLGAGNEVGRSCVYMSYKGKT+LFDCGIHPAYSG+ ALP+F
Sbjct: 2    SLKRPDSSLTREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYF 61

Query: 223  DEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSDYVKVSKT 402
            DEIDPS IDVLLVTHFHLDH ASLPYFLEKT+FKGRVFMTHATKAIYKLLLSDYVKVSK 
Sbjct: 62   DEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKV 121

Query: 403  SFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDIDSIRILY 582
            S EDMLYDEQDIL SMDKIEVIDFHQTLEVNGIRFWCY AGHVLGAAMFMVDI  +R+LY
Sbjct: 122  SVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLY 181

Query: 583  TGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKTISQGGRV 762
            TGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ +H REKRFTDVIH TISQGGRV
Sbjct: 182  TGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIHSTISQGGRV 241

Query: 763  LIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSMNVRIRNQ 942
            LIP              DEYWSNHPELH+IPIYYAS LAKRCM VYQTYINSMN RIRNQ
Sbjct: 242  LIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQ 301

Query: 943  VAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKRNACIISG 1122
             A SNPF FKHI  L SIENF DVGPSVVMASP GLQSG SRQLFD WC DK+NAC+I G
Sbjct: 302  FANSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLSRQLFDMWCSDKKNACVIPG 361

Query: 1123 LAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDELDPSNIIL 1302
              VEGTLAKTI+++P EVT          M +H ISFSAHADF QTS FL EL P NIIL
Sbjct: 362  YVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIIL 421

Query: 1303 VHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAEKTEKIPK 1476
            VHGE+ EMGRLK+KLI + +  N KI SPKNC+ V++Y  S+++AK IG LAEKT   P 
Sbjct: 422  VHGEANEMGRLKQKLITQFADRNTKIISPKNCQSVEMYFNSEKMAKTIGRLAEKT---PG 478

Query: 1477 VGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHRVKQIYSS 1644
            VGE VSGLLVKK  +YQ+MAPDDL V    ST ++TQRITIPY+G F VIKHR+KQIY S
Sbjct: 479  VGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYTGAFGVIKHRLKQIYES 538

Query: 1645 VESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILNMNREMIH 1809
            VESL D E     F VH+RVTV+ ESEKHI L WTSDP SDMVSDSIVAL+LN++RE+  
Sbjct: 539  VESLPDEESEVPAFRVHERVTVKHESEKHISLHWTSDPISDMVSDSIVALVLNISREIPK 598

Query: 1810 KVVVNES--KEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILDKESGVVE 1983
             VV +E+   EE+  K+AEKVIH +LVSLFGDVK+G  G +VI+VD NVA LDK+SG VE
Sbjct: 599  VVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISVDGNVAHLDKQSGNVE 658

Query: 1984 SENEGLKERVRVAFRQIQIAMKPIPLS 2064
            SENEGLKERVRVAF++IQ A+KPIPLS
Sbjct: 659  SENEGLKERVRVAFQRIQNAVKPIPLS 685


>ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like [Vitis vinifera]
          Length = 693

 Score =  969 bits (2505), Expect = 0.0
 Identities = 501/694 (72%), Positives = 560/694 (80%), Gaps = 13/694 (1%)
 Frame = +1

Query: 22   AMAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSG 201
            A  G   SLKR +SS+TR GDQLI+TPLGAGNEVGRSCVYMSYKGKT+LFDCGIHPAYSG
Sbjct: 2    ASTGPSQSLKRPDSSLTR-GDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSG 60

Query: 202  IGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSD 381
            + ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+FKGRVFMTHATKAIYKLLLSD
Sbjct: 61   MAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSD 120

Query: 382  YVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDI 561
            YVKVSK S EDMLYDEQDIL SMDKIEVIDFHQTLEVNGIRFWCY AGHVLGAAMFMVDI
Sbjct: 121  YVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDI 180

Query: 562  DSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKT 741
              +R+LYTGDYS EE+RHL AAE P F PD+CIIEST G+QLH+ +H REKRFTDVIH T
Sbjct: 181  AGVRVLYTGDYSREEDRHLRAAEIPQFCPDICIIESTYGVQLHQPRHVREKRFTDVIHST 240

Query: 742  ISQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSM 921
            ISQGGRVLIP              DEYWSNHPELH++PIYYAS LAKRCM VYQTYINSM
Sbjct: 241  ISQGGRVLIPAYALGRAQELLLILDEYWSNHPELHNVPIYYASPLAKRCMAVYQTYINSM 300

Query: 922  NVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKR 1101
            N RIRNQ A SNPF FKHI  L SIENF DVGPSVVMASPGGLQSG SRQLFD WC DK+
Sbjct: 301  NERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPGGLQSGLSRQLFDMWCSDKK 360

Query: 1102 NACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDEL 1281
            NAC+I G  V GTLAKTI+++P EVT          M +H ISFSAHADF QTS FL EL
Sbjct: 361  NACVIPGYVVGGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKEL 420

Query: 1282 DPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAE 1455
             P NIILVHGE+ EMGRLK+KLI + +  N KI SPKNC+ V++Y  S+++AK IG LAE
Sbjct: 421  MPPNIILVHGEANEMGRLKQKLITQFADCNTKIISPKNCQSVEMYFNSEKMAKTIGRLAE 480

Query: 1456 KTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHR 1623
            KT   P+VGE VSGLLVKK  +YQ+MAPDDL V    ST ++TQRITIPY+G F VIKHR
Sbjct: 481  KT---PEVGETVSGLLVKKGFTYQIMAPDDLHVFWQLSTANVTQRITIPYTGAFGVIKHR 537

Query: 1624 VKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILN 1788
            +KQIY SVESL D E     F VH+RVTV+ +SEKHI L WTSDP SDMVSDSIVAL+LN
Sbjct: 538  LKQIYESVESLPDEESEVPAFRVHERVTVKHDSEKHISLHWTSDPISDMVSDSIVALVLN 597

Query: 1789 MNREMIHKVVVNES--KEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILD 1962
            ++ E+   +V +E+   EE+  K+AEKVIH +LVSLFGDVK+   G +VI+VD NV  LD
Sbjct: 598  ISLEIPKVIVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLEGNGNLVISVDGNVVHLD 657

Query: 1963 KESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            K+SG VESENEGLKERVRVAF++IQ A+KPIP S
Sbjct: 658  KQSGNVESENEGLKERVRVAFQRIQNAVKPIPPS 691


>ref|XP_006471216.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like isoform X1 [Citrus sinensis]
          Length = 694

 Score =  967 bits (2501), Expect = 0.0
 Identities = 491/694 (70%), Positives = 563/694 (81%), Gaps = 13/694 (1%)
 Frame = +1

Query: 22   AMAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSG 201
            A  GQP SLKR ++ ++REGDQLI+TPLGAGNEVGRSCVYMSYKGKT+LFDCGIHPAYSG
Sbjct: 2    ASVGQPPSLKRRDAPVSREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSG 61

Query: 202  IGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSD 381
            + ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+FKGRVFMTHATKAIYKLLL+D
Sbjct: 62   MAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTD 121

Query: 382  YVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDI 561
            YVKVSK S EDML+DEQDI  SMDKIEV+DFHQT+EVNGI+FWCY AGHVLGAAMFMVDI
Sbjct: 122  YVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDI 181

Query: 562  DSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKT 741
              +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ ++ REKRFTDVIH T
Sbjct: 182  AGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIREKRFTDVIHST 241

Query: 742  ISQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSM 921
            ISQGGRVLIP              DEYWSNHPE H+IPIYYAS LAK+CM VYQTYI SM
Sbjct: 242  ISQGGRVLIPAFALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSM 301

Query: 922  NVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKR 1101
            N RIRNQ A SNPF FKHI  LNSI++F DVGPSVVMASPGGLQSG SRQLFD WC DK+
Sbjct: 302  NERIRNQFANSNPFKFKHISPLNSIDDFSDVGPSVVMASPGGLQSGLSRQLFDIWCSDKK 361

Query: 1102 NACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDEL 1281
            NAC+I G  VEGTLAKTI+S+P EVT          M +H ISFSAHAD+ QTS FL EL
Sbjct: 362  NACVIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKEL 421

Query: 1282 DPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAE 1455
             P NIILVHGES EMGRLK KL+   +  N KI +PKNC+ V++Y  S+++AK IG LAE
Sbjct: 422  MPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMYFNSEKMAKTIGRLAE 481

Query: 1456 KTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHR 1623
            KT   P+VGE VSG+LVKK  +YQ+MAPDDL +    ST ++TQRIT+PYSG F VIK+R
Sbjct: 482  KT---PEVGETVSGILVKKGFTYQIMAPDDLHIFSQLSTANITQRITVPYSGAFGVIKYR 538

Query: 1624 VKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILN 1788
            ++QIY SVES TD E       VHDRVT++Q+SEKHI + WTSDP SDMVSDS+VAL+LN
Sbjct: 539  LEQIYESVESSTDEESGVPTLRVHDRVTLKQDSEKHISMHWTSDPISDMVSDSVVALVLN 598

Query: 1789 MNREMIHKVVVNES--KEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILD 1962
            +NRE+   VV +E+   EE+  K+AEKVIH +LVSLFGDVK+G  GK+VINVD NVA LD
Sbjct: 599  INREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGGNGKVVINVDGNVAHLD 658

Query: 1963 KESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            K+SG VESENEGLKERV+ AF +IQ A+KPIPLS
Sbjct: 659  KQSGDVESENEGLKERVKTAFMRIQRAVKPIPLS 692


>ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citrus clementina]
            gi|557533874|gb|ESR44992.1| hypothetical protein
            CICLE_v10000468mg [Citrus clementina]
          Length = 694

 Score =  967 bits (2499), Expect = 0.0
 Identities = 491/694 (70%), Positives = 563/694 (81%), Gaps = 13/694 (1%)
 Frame = +1

Query: 22   AMAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSG 201
            A  GQP SLKR ++ ++REGDQLI+TPLGAGNEVGRSCVYMSYKGKT+LFDCGIHPAYSG
Sbjct: 2    ASVGQPPSLKRRDAPVSREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSG 61

Query: 202  IGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSD 381
            + ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+FKGRVFMTHATKAIYKLLL+D
Sbjct: 62   MAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLTD 121

Query: 382  YVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDI 561
            YVKVSK S EDML+DEQDI  SMDKIEV+DFHQT+EVNGI+FWCY AGHVLGAAMFMVDI
Sbjct: 122  YVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDI 181

Query: 562  DSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKT 741
              +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ ++ REKRFTDVIH T
Sbjct: 182  AGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIREKRFTDVIHST 241

Query: 742  ISQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSM 921
            ISQGGRVLIP              DEYWSNHPE H+IPIYYAS LAK+CM VYQTYI SM
Sbjct: 242  ISQGGRVLIPAFALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSM 301

Query: 922  NVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKR 1101
            N RIRNQ A SNPF FKHI  LNSI++F DVGPSVVMASPGGLQSG SRQLFD WC DK+
Sbjct: 302  NERIRNQFANSNPFKFKHISPLNSIDDFSDVGPSVVMASPGGLQSGLSRQLFDIWCSDKK 361

Query: 1102 NACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDEL 1281
            NAC+I G  VEGTLAKTI+S+P EVT          M +H ISFSAHAD+ QTS FL EL
Sbjct: 362  NACVIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKEL 421

Query: 1282 DPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAE 1455
             P NIILVHGES EMGRLK KL+   +  N KI +PKNC+ V++Y  S+++AK IG LAE
Sbjct: 422  MPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMYFNSEKMAKTIGRLAE 481

Query: 1456 KTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHR 1623
            KT   P+VGE VSG+LVKK  +YQ+MAPDDL +    ST ++TQRIT+PYSG F VIK+R
Sbjct: 482  KT---PEVGETVSGILVKKGFTYQIMAPDDLHIFSQLSTANITQRITVPYSGAFGVIKYR 538

Query: 1624 VKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILN 1788
            ++QIY SVES TD E       VHDRVT++Q+SEKHI + WTSDP SDMVSDS+VAL+LN
Sbjct: 539  LEQIYESVESSTDEESGVPTLRVHDRVTLKQDSEKHISMHWTSDPISDMVSDSVVALVLN 598

Query: 1789 MNREMIHKVVVNES--KEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILD 1962
            +NRE+   VV +E+   EE+  K+AEKVIH +LVSLFGDVK+G  GK+VINVD NVA LD
Sbjct: 599  INREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGDNGKVVINVDGNVAHLD 658

Query: 1963 KESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            K+SG VESENEGLKERV+ AF +IQ A+KPIPLS
Sbjct: 659  KQSGDVESENEGLKERVKTAFMRIQRAVKPIPLS 692


>ref|XP_007042279.1| Cleavage and polyadenylation specificity factor 73-I [Theobroma
            cacao] gi|508706214|gb|EOX98110.1| Cleavage and
            polyadenylation specificity factor 73-I [Theobroma cacao]
          Length = 694

 Score =  965 bits (2495), Expect = 0.0
 Identities = 489/694 (70%), Positives = 562/694 (80%), Gaps = 13/694 (1%)
 Frame = +1

Query: 22   AMAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSG 201
            A  GQPSSLKR ++ +TREGDQL +TPLGAGNEVGRSCVYMSYK KTVLFDCGIHP YSG
Sbjct: 2    ASTGQPSSLKRRDAPLTREGDQLTITPLGAGNEVGRSCVYMSYKSKTVLFDCGIHPGYSG 61

Query: 202  IGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSD 381
            + ALP+FDEIDPS ID LL+THFHLDH ASLPYFLEKT+F+GRVFMTHATKAIYKL+L+D
Sbjct: 62   MAALPYFDEIDPSTIDALLITHFHLDHAASLPYFLEKTTFRGRVFMTHATKAIYKLILTD 121

Query: 382  YVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDI 561
            YVKVSK S EDML+DEQDI  SMDKIEVIDFHQT+EVNGI+FWCY AGHVLGAAMFMVDI
Sbjct: 122  YVKVSKVSVEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDI 181

Query: 562  DSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKT 741
              +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ +H REKRFTD +H T
Sbjct: 182  AGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRHIREKRFTDAVHST 241

Query: 742  ISQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSM 921
            ISQGGRVLIP              DEYWSNHPELH+IPIYYAS LAK+CM VYQTYI SM
Sbjct: 242  ISQGGRVLIPAFALGRSQELLLILDEYWSNHPELHNIPIYYASPLAKKCMAVYQTYILSM 301

Query: 922  NVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKR 1101
            N RIRNQ A SNPF FKHI  LNSIE+F DVGPSVVMASPGGLQSG SRQLFD WC DKR
Sbjct: 302  NERIRNQFANSNPFKFKHISPLNSIEDFSDVGPSVVMASPGGLQSGLSRQLFDMWCSDKR 361

Query: 1102 NACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDEL 1281
            NACI+ G  VEGTLAKTI+++P EVT          M +H ISFSAHAD+ QTS FL EL
Sbjct: 362  NACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLCMQVHYISFSAHADYAQTSTFLKEL 421

Query: 1282 DPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAE 1455
             P NIILVHGE+ EMGRLK+KLI   +  N KI +PKNC+ V++Y  S+++AK IG LAE
Sbjct: 422  MPPNIILVHGEANEMGRLKQKLITELTDGNTKIITPKNCQSVEMYFNSEKMAKTIGRLAE 481

Query: 1456 KTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHR 1623
            KT   P+VGE VSG+LVKK  +YQ+MAPDD+ +    ST ++TQRITIP++G F VIKHR
Sbjct: 482  KT---PEVGETVSGVLVKKGFTYQIMAPDDIHIFSQLSTANITQRITIPFAGAFGVIKHR 538

Query: 1624 VKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILN 1788
            ++QIY SVES TD E       VHDRVTV+Q+S+KHI L WTSDP SDMVSDSIVAL+LN
Sbjct: 539  LEQIYESVESSTDEESGVPTLRVHDRVTVKQDSDKHISLHWTSDPISDMVSDSIVALVLN 598

Query: 1789 MNREMIHKVVVNES--KEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILD 1962
            ++RE+   VV +E+   EE+  K+AEKVIH +LVSLFGDVK+G  GK++I+VD NVA LD
Sbjct: 599  ISREIPKVVVESEAVKMEEENGKKAEKVIHALLVSLFGDVKLGENGKLMISVDGNVAHLD 658

Query: 1963 KESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            K+SG VESENEGLKERV+ AFR+IQ A+KPIPLS
Sbjct: 659  KQSGDVESENEGLKERVKTAFRRIQSAVKPIPLS 692


>gb|EXC33626.1| Cleavage and polyadenylation specificity factor subunit 3-I [Morus
            notabilis]
          Length = 693

 Score =  960 bits (2481), Expect = 0.0
 Identities = 494/692 (71%), Positives = 563/692 (81%), Gaps = 13/692 (1%)
 Frame = +1

Query: 31   GQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGIGA 210
            GQP+SLKR +S   RE D+L++TPLGAGNEVGRSCVYMS+K KTVLFDCGIHPAYSG+ A
Sbjct: 6    GQPASLKRRDSLAAREEDKLVITPLGAGNEVGRSCVYMSFKSKTVLFDCGIHPAYSGMAA 65

Query: 211  LPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSDYVK 390
            LP+FDEIDPS +DVLL+THFHLDH ASLPYFLEKT+FKGRVFMT+ATKAIYKLLL+DYVK
Sbjct: 66   LPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLTDYVK 125

Query: 391  VSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDIDSI 570
            VSK S EDMLYDEQDI  SMDKIEVIDFHQT+EVNGIRFWCY AGHVLGAAMFMVDI  +
Sbjct: 126  VSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGV 185

Query: 571  RILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKTISQ 750
            R+LYTGDYS +E+RHL AAETP FSPDVCIIEST G+Q H+ ++ REKRFTDVIH TISQ
Sbjct: 186  RVLYTGDYSRDEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRNIREKRFTDVIHSTISQ 245

Query: 751  GGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSMNVR 930
            GGRVLIP              DEYWSNHPEL +IPIYYAS LAKRC++VY+TY  SMN R
Sbjct: 246  GGRVLIPVFALGRAQELLLILDEYWSNHPELQNIPIYYASPLAKRCLSVYETYTLSMNDR 305

Query: 931  IRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKRNAC 1110
            IRN  A SNPF+FKHI  L SIENFKDVGPSVVMASPGGLQSG SRQLFD WC DKRNAC
Sbjct: 306  IRN--AKSNPFIFKHISPLKSIENFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKRNAC 363

Query: 1111 IISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDELDPS 1290
            +I G  VEGTLAKTI+++P EVT          M +H ISFSAHAD  QTSAFL+EL P 
Sbjct: 364  VIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADSAQTSAFLEELRPP 423

Query: 1291 NIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAEKTE 1464
            NIILVHGE+ EMGRLK+KL+ + +  N KI +PKNC+ V++Y  S+++AK IG LAEKT 
Sbjct: 424  NIILVHGEANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNSQKMAKAIGKLAEKT- 482

Query: 1465 KIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHRVKQ 1632
              P+VG+IVSGLLVKK  SYQ+MAPDDL V    +T ++TQRITIPYS  FSVIKHR+KQ
Sbjct: 483  --PEVGDIVSGLLVKKGFSYQIMAPDDLHVFSQLATANITQRITIPYSSAFSVIKHRLKQ 540

Query: 1633 IYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILNMNR 1797
            IY SVES TD E       VHDRVTV+ ES+KHI L WTSDP SDMVSDS+VAL+LN+NR
Sbjct: 541  IYDSVESSTDEESGVPTLRVHDRVTVKHESDKHISLHWTSDPISDMVSDSVVALVLNINR 600

Query: 1798 EMIHKVVVNE--SKEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILDKES 1971
            E+   VV +E    EED EK+AEKVI+ +LVSLFGDVK+   GK++INVD NVA LDK+S
Sbjct: 601  EVPKVVVESEDTKTEEDNEKKAEKVIYALLVSLFGDVKLRGNGKIMINVDGNVAQLDKQS 660

Query: 1972 GVVESENEGLKERVRVAFRQIQIAMKPIPLST 2067
            G VESENEGLKERVR AFR+IQ A+KPIPLS+
Sbjct: 661  GDVESENEGLKERVRTAFRRIQSAVKPIPLSS 692


>ref|XP_006431751.1| hypothetical protein CICLE_v10000467mg [Citrus clementina]
            gi|557533873|gb|ESR44991.1| hypothetical protein
            CICLE_v10000467mg [Citrus clementina]
          Length = 694

 Score =  950 bits (2455), Expect = 0.0
 Identities = 482/694 (69%), Positives = 558/694 (80%), Gaps = 13/694 (1%)
 Frame = +1

Query: 22   AMAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSG 201
            A  GQP SLKR +  ++REGDQL + PLGAGNEVGRSCVYMSY+GKT+LFDCGIHPAYSG
Sbjct: 2    ASTGQPPSLKRRDVPVSREGDQLTIIPLGAGNEVGRSCVYMSYRGKTILFDCGIHPAYSG 61

Query: 202  IGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSD 381
            + ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+F GRVFMTHATKAIYKLLL+D
Sbjct: 62   MAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTD 121

Query: 382  YVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDI 561
            YVKVSK S EDML+DEQDI  SMD+IEV+DFHQT+EVNGI+FWCY AGHVLGAAMFMVDI
Sbjct: 122  YVKVSKVSVEDMLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDI 181

Query: 562  DSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKT 741
              +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ ++ RE+RFTDVIH T
Sbjct: 182  AGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHST 241

Query: 742  ISQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSM 921
            ISQGGRVLIP              DEYWSNHPE H+IPIYYAS LAK+CM VYQTYI SM
Sbjct: 242  ISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSM 301

Query: 922  NVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKR 1101
            N RIRNQ A SNPF FKHI  LNSI++  DVGPSVVMASPGGLQSG SRQLFD WC DK+
Sbjct: 302  NERIRNQFANSNPFKFKHISPLNSIDDLSDVGPSVVMASPGGLQSGLSRQLFDIWCSDKK 361

Query: 1102 NACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDEL 1281
            NAC+I G  VEGTLAKTI+S+P EVT          M +H ISFSAHAD+ QTS FL EL
Sbjct: 362  NACVIPGYLVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKEL 421

Query: 1282 DPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAE 1455
             P NIILVHGES EMGRLK KL+   +  N KI +PKNC+ V++Y  S+++AK IG LA 
Sbjct: 422  MPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMYFNSEKMAKTIGRLA- 480

Query: 1456 KTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHR 1623
              EK+P+VGE VSG+LVK   +YQ+MAPDDL +    ST ++TQRITIPYSG F VIK+R
Sbjct: 481  --EKMPEVGETVSGILVKTGFTYQIMAPDDLHIFSQLSTTNITQRITIPYSGAFGVIKYR 538

Query: 1624 VKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILN 1788
            ++QIY SVES TD E       VHDRVT++Q+SEKHI + WTSDP SDMVSDSIVAL+LN
Sbjct: 539  LEQIYESVESSTDEESGVPTLRVHDRVTLKQDSEKHISMHWTSDPISDMVSDSIVALVLN 598

Query: 1789 MNREMIHKVVVNES--KEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILD 1962
            +NRE+   VV +E+   EE+  K+AEKVIH +LVSLFGDVK+G  GK+VINVD NVA LD
Sbjct: 599  INREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGDNGKLVINVDGNVAHLD 658

Query: 1963 KESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            K+SG VESENEGLKE+V+ AF++IQ A+KPIPL+
Sbjct: 659  KQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLA 692


>ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like isoform X1 [Citrus sinensis]
          Length = 694

 Score =  948 bits (2451), Expect = 0.0
 Identities = 480/694 (69%), Positives = 558/694 (80%), Gaps = 13/694 (1%)
 Frame = +1

Query: 22   AMAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSG 201
            A  GQP SLKR +  ++REGDQL + PLGAGNEVGRSCVYMSYKGKT+LFDCGIHPAYSG
Sbjct: 2    ASTGQPPSLKRRDVPVSREGDQLTIIPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSG 61

Query: 202  IGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSD 381
            + ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+F GRVFMTHATKAIYKLLL+D
Sbjct: 62   MAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTHATKAIYKLLLTD 121

Query: 382  YVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDI 561
            YVKVSK S EDML+DEQDI  SMD+IEV+DFHQT+EVNGI+FWCY AGHVLGAAMFMVDI
Sbjct: 122  YVKVSKVSVEDMLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDI 181

Query: 562  DSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKT 741
              +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ ++ RE+RFTDVIH T
Sbjct: 182  AGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHST 241

Query: 742  ISQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSM 921
            ISQGGRVLIP              DEYWSNHPE H+IPIYYAS LAK+CM VYQTYI SM
Sbjct: 242  ISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSM 301

Query: 922  NVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKR 1101
            N RIRNQ A SNPF FKHI  LNSI++  DVGPSVVMASPGGLQSG SRQLFD WC DK+
Sbjct: 302  NERIRNQFANSNPFKFKHISPLNSIDDLSDVGPSVVMASPGGLQSGLSRQLFDIWCSDKK 361

Query: 1102 NACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDEL 1281
            NAC+I G  VEGTLAKTI+S+P EVT          M +H ISFSAHAD+ QTS FL EL
Sbjct: 362  NACVIPGYIVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKEL 421

Query: 1282 DPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAE 1455
             P NIILVHGES EMGRLK KL+   +  N KI +PKNC+ V++Y  S+++AK IG LA 
Sbjct: 422  MPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMYFNSEKMAKTIGRLA- 480

Query: 1456 KTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHR 1623
              EK+P+VGE VSG+LVK   +YQ+MAPDDL +    ST ++TQRITIPYSG F V+K+R
Sbjct: 481  --EKMPEVGETVSGILVKTGFTYQIMAPDDLHIFSQLSTANITQRITIPYSGAFGVMKYR 538

Query: 1624 VKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILN 1788
            ++QIY SVES TD E       VHDRVT++Q+SEKHI + WTSDP SDMVSDS+VAL+LN
Sbjct: 539  LEQIYESVESSTDEESGVPTLQVHDRVTLKQDSEKHISMCWTSDPISDMVSDSVVALVLN 598

Query: 1789 MNREMIHKVVVNES--KEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILD 1962
            +N+E+   VV +E+   EE+  K+AEKVIH +LVSLFGDV++G  GK+VINVD NVA LD
Sbjct: 599  INQEVPKLVVESEAIKSEEESGKKAEKVIHALLVSLFGDVQLGENGKLVINVDGNVAHLD 658

Query: 1963 KESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            K+SG VESENEGLKE+V+ AF++IQ A+KPIPLS
Sbjct: 659  KQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLS 692


>ref|XP_006300311.1| hypothetical protein CARUB_v10019868mg [Capsella rubella]
            gi|482569021|gb|EOA33209.1| hypothetical protein
            CARUB_v10019868mg [Capsella rubella]
          Length = 725

 Score =  944 bits (2441), Expect = 0.0
 Identities = 482/695 (69%), Positives = 558/695 (80%), Gaps = 15/695 (2%)
 Frame = +1

Query: 25   MAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGI 204
            MA   +SLKR    I+R+GDQLIVTPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSG+
Sbjct: 33   MASSSTSLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGM 92

Query: 205  GALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSDY 384
             ALP+FDEIDPS IDVLL+THFH+DH ASLPYFLEKT+F GRVFMTHATKAIYKLLL+DY
Sbjct: 93   AALPYFDEIDPSTIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDY 152

Query: 385  VKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDID 564
            VKVSK S EDML+DEQDI  SMDKIEVIDFHQT+EVNGI+FWCY AGHVLGAAMFMVDI 
Sbjct: 153  VKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIA 212

Query: 565  SIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKTI 744
             +RILYTGDYS EE+RHL AAE P FSPD+CIIESTSG+QLH+S+H REKRFTDVIH T+
Sbjct: 213  GVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTV 272

Query: 745  SQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSMN 924
            +QGGRVLIP              DEYW+NHP+LH+IPIYYAS LAK+CM VYQTYI SMN
Sbjct: 273  AQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMN 332

Query: 925  VRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKRN 1104
             RIRNQ A SNPFVFKHI  LNSI++F+DVGPSVVMA+PGGLQSG SRQLFD WC DK+N
Sbjct: 333  DRIRNQFANSNPFVFKHISPLNSIDDFRDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKN 392

Query: 1105 ACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDELD 1284
            ACII G  VEGTLAKTI+++P EVT          M +H ISFSAHAD+ QTS FL EL 
Sbjct: 393  ACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELM 452

Query: 1285 PSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRSKRVAKVIGSLAEK 1458
            P NIILVHGE+ EM RLK+KL       N KI +PKNCE V++Y  S+++AK IG LAEK
Sbjct: 453  PPNIILVHGEANEMMRLKQKLFTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEK 512

Query: 1459 TEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHRV 1626
            T   P VG+ VSG+LVKK  +YQ+MAPD+L V    ST ++TQRITIP++G F VIKHR+
Sbjct: 513  T---PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFAGAFGVIKHRL 569

Query: 1627 KQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILNM 1791
            ++I+ SVES TD E       VH+RVTV+QESEKHI L W+SDP SDMVSDSIVAL+LN+
Sbjct: 570  EKIFESVESSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALVLNI 629

Query: 1792 NREMIHKVVVNE----SKEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAIL 1959
            +RE + K+VV E      EE+  K+ EKVI+ +LVSLFGDVK+G  GK+VI VD NVA L
Sbjct: 630  SRE-VPKIVVEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQL 688

Query: 1960 DKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            DKESG VESE+ GLKERVRVAF +IQ A+KPIPLS
Sbjct: 689  DKESGEVESEHSGLKERVRVAFERIQSAVKPIPLS 723


>ref|XP_002323823.2| hypothetical protein POPTR_0017s11240g [Populus trichocarpa]
            gi|566212712|ref|XP_002323825.2| hypothetical protein
            POPTR_0017s11240g [Populus trichocarpa]
            gi|550320032|gb|EEF03956.2| hypothetical protein
            POPTR_0017s11240g [Populus trichocarpa]
            gi|550320033|gb|EEF03958.2| hypothetical protein
            POPTR_0017s11240g [Populus trichocarpa]
          Length = 699

 Score =  942 bits (2436), Expect = 0.0
 Identities = 483/694 (69%), Positives = 557/694 (80%), Gaps = 14/694 (2%)
 Frame = +1

Query: 22   AMAGQPSSLKRSNSSITREG-DQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYS 198
            A  GQ  SLKR ++ +TREG DQL +TPLGAGNEVGRSCVYMS+KGKTVLFDCGIHPAYS
Sbjct: 2    ASTGQSQSLKRRDAPVTREGGDQLTLTPLGAGNEVGRSCVYMSFKGKTVLFDCGIHPAYS 61

Query: 199  GIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLS 378
            G+ ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+F+GRVFMTHATKAIYKLLL+
Sbjct: 62   GMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTHATKAIYKLLLT 121

Query: 379  DYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVD 558
            DYVKVSK S EDML+DE+DI  SMDKIEVIDFHQTL+VNGI+FWCY AGHVLGAAMFMVD
Sbjct: 122  DYVKVSKVSVEDMLFDEKDINRSMDKIEVIDFHQTLDVNGIKFWCYTAGHVLGAAMFMVD 181

Query: 559  IDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHK 738
            I  +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ +H REKRFTDVIH 
Sbjct: 182  IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHLREKRFTDVIHS 241

Query: 739  TISQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINS 918
            TIS GGRVLIP              DEYW+NHPELH+IPIYYAS LAK+CMTVYQTYI S
Sbjct: 242  TISLGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKKCMTVYQTYILS 301

Query: 919  MNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDK 1098
            MN RIRNQ A SNPF FKHI  LNSIE+F DVGPSVVMASPGGLQSG SRQLFD WC DK
Sbjct: 302  MNERIRNQFANSNPFKFKHISPLNSIEDFSDVGPSVVMASPGGLQSGLSRQLFDMWCSDK 361

Query: 1099 RNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDE 1278
            +NAC++ G  VEGTLAKTI+++P EV           M +H ISFSAHAD+ QTS FL E
Sbjct: 362  KNACVLPGYVVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKE 421

Query: 1279 LDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRSKRVAKVIGSLA 1452
            L P NIILVHGE+ EMGRLK+KLI      N KI +PKNC+ V++Y  S+++AK IG LA
Sbjct: 422  LMPPNIILVHGEANEMGRLKQKLITEFADGNTKIITPKNCQSVEMYFNSEKMAKTIGKLA 481

Query: 1453 EKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKH 1620
            E+T   P VGE VSG+LVKK  +YQ+MAP DL V    ST ++TQRITIP+SG F VIKH
Sbjct: 482  ERT---PDVGETVSGILVKKGFTYQIMAPGDLHVFSQLSTGNITQRITIPFSGAFGVIKH 538

Query: 1621 RVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALIL 1785
            R++QIY SVES TD E       VH+ VTV+QES++HI L WT+DP SDMVSDSIVAL+L
Sbjct: 539  RLEQIYESVESGTDEESGFPTLQVHELVTVKQESDRHISLHWTADPISDMVSDSIVALVL 598

Query: 1786 NMNREMIHKVVVNE--SKEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAIL 1959
            N++RE+   +V +E    EE+ EK+AEKVI+ +LVSLFGDVK+G  GK+V+ VD NVA L
Sbjct: 599  NISREVPKVIVESEDIKSEEENEKKAEKVIYALLVSLFGDVKLGENGKLVLRVDGNVAEL 658

Query: 1960 DKESGVVESENEGLKERVRVAFRQIQIAMKPIPL 2061
            DK+SG VESENEGLKERVR AFR+I+ A++PIPL
Sbjct: 659  DKQSGDVESENEGLKERVRTAFRRIRSAVRPIPL 692


>gb|AAL66977.1| putative cleavage and polyadenylation specificity factor [Arabidopsis
            thaliana]
          Length = 693

 Score =  940 bits (2430), Expect = 0.0
 Identities = 481/695 (69%), Positives = 557/695 (80%), Gaps = 15/695 (2%)
 Frame = +1

Query: 25   MAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGI 204
            MA   +SLKR    I+R+GDQLIVTPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSG+
Sbjct: 1    MASSSTSLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGM 60

Query: 205  GALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSDY 384
             ALP+FDEIDPS IDVLL+THFH+DH ASLPYFLEKT+F GRVFMTHATKAIYKLLL+DY
Sbjct: 61   AALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDY 120

Query: 385  VKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDID 564
            VKVSK S EDML+DEQDI  SMDKIEVIDFHQT+EVNGI+FWCY AGHVLGAAMFMVDI 
Sbjct: 121  VKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIA 180

Query: 565  SIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKTI 744
             +RILYTGDYS EE+RHL AAE P FSPD+CIIESTSG+QLH+S+H REKRFTDVIH T+
Sbjct: 181  GVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTV 240

Query: 745  SQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSMN 924
            +QGGRVLIP              DEYW+NHP+LH+IPIYYAS LAK+CM VYQTYI SMN
Sbjct: 241  AQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMN 300

Query: 925  VRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKRN 1104
             RIRNQ A SNPFVFKHI  LNSI++F DVGPSVVMA+PGGLQSG SRQLFD WC DK+N
Sbjct: 301  DRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKN 360

Query: 1105 ACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDELD 1284
            ACII G  VEGTLAKTI+++P EVT          M +H ISFSAHAD+ QTS FL EL 
Sbjct: 361  ACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELM 420

Query: 1285 PSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRSKRVAKVIGSLAEK 1458
            P NIILVHGE+ EM RLK+KL+      N KI +PKNCE V++Y  S+++AK IG LAEK
Sbjct: 421  PPNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEK 480

Query: 1459 TEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHRV 1626
            T   P VG+ VSG+LVKK  +YQ+MAPD+L V    ST ++TQRITIP+ G F VIKHR+
Sbjct: 481  T---PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRL 537

Query: 1627 KQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILNM 1791
            ++I+ SVE  TD E       VH+RVTV+QESEKHI L W+SDP SDMVSDSIVALILN+
Sbjct: 538  EKIFESVEFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNI 597

Query: 1792 NREMIHKVVVNE----SKEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAIL 1959
            +RE + K+V+ E      EE+  K+ EKVI+ +LVSLFGDVK+G  GK+VI VD+NVA L
Sbjct: 598  SRE-VPKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDSNVAQL 656

Query: 1960 DKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            DKESG VESE+ GLKERVRVAF +IQ A+KPIPLS
Sbjct: 657  DKESGEVESEHSGLKERVRVAFERIQSAVKPIPLS 691


>ref|NP_176297.1| cleavage and polyadenylation specificity factor subunit 73-I
            [Arabidopsis thaliana] gi|30696512|ref|NP_849835.1|
            cleavage and polyadenylation specificity factor subunit
            73-I [Arabidopsis thaliana]
            gi|79320389|ref|NP_001031215.1| cleavage and
            polyadenylation specificity factor subunit 73-I
            [Arabidopsis thaliana]
            gi|75262219|sp|Q9C952.1|CPSF3_ARATH RecName:
            Full=Cleavage and polyadenylation specificity factor
            subunit 3-I; AltName: Full=Cleavage and polyadenylation
            specificity factor 73 kDa subunit I; Short=AtCPSF73-I;
            Short=CPSF 73 kDa subunit I
            gi|12323330|gb|AAG51638.1|AC018908_4 putative cleavage
            and polyadenylation specificity factor; 72745-70039
            [Arabidopsis thaliana] gi|23297661|gb|AAN13003.1|
            putative cleavage and polyadenylation specificity factor
            [Arabidopsis thaliana] gi|24415578|gb|AAN41458.1|
            putative cleavage and polyadenylation specificity factor
            73 kDa subunit [Arabidopsis thaliana]
            gi|222422865|dbj|BAH19419.1| AT1G61010 [Arabidopsis
            thaliana] gi|222423059|dbj|BAH19511.1| AT1G61010
            [Arabidopsis thaliana] gi|332195645|gb|AEE33766.1|
            cleavage and polyadenylation specificity factor subunit
            3-I [Arabidopsis thaliana] gi|332195646|gb|AEE33767.1|
            cleavage and polyadenylation specificity factor subunit
            3-I [Arabidopsis thaliana] gi|332195647|gb|AEE33768.1|
            cleavage and polyadenylation specificity factor subunit
            3-I [Arabidopsis thaliana]
          Length = 693

 Score =  940 bits (2429), Expect = 0.0
 Identities = 481/695 (69%), Positives = 556/695 (80%), Gaps = 15/695 (2%)
 Frame = +1

Query: 25   MAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGI 204
            MA   +SLKR    I+R+GDQLIVTPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSG+
Sbjct: 1    MASSSTSLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGM 60

Query: 205  GALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSDY 384
             ALP+FDEIDPS IDVLL+THFH+DH ASLPYFLEKT+F GRVFMTHATKAIYKLLL+DY
Sbjct: 61   AALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDY 120

Query: 385  VKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDID 564
            VKVSK S EDML+DEQDI  SMDKIEVIDFHQT+EVNGI+FWCY AGHVLGAAMFMVDI 
Sbjct: 121  VKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIA 180

Query: 565  SIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKTI 744
             +RILYTGDYS EE+RHL AAE P FSPD+CIIESTSG+QLH+S+H REKRFTDVIH T+
Sbjct: 181  GVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTV 240

Query: 745  SQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSMN 924
            +QGGRVLIP              DEYW+NHP+LH+IPIYYAS LAK+CM VYQTYI SMN
Sbjct: 241  AQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMN 300

Query: 925  VRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKRN 1104
             RIRNQ A SNPFVFKHI  LNSI++F DVGPSVVMA+PGGLQSG SRQLFD WC DK+N
Sbjct: 301  DRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKN 360

Query: 1105 ACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDELD 1284
            ACII G  VEGTLAKTI+++P EVT          M +H ISFSAHAD+ QTS FL EL 
Sbjct: 361  ACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELM 420

Query: 1285 PSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRSKRVAKVIGSLAEK 1458
            P NIILVHGE+ EM RLK+KL+      N KI +PKNCE V++Y  S+++AK IG LAEK
Sbjct: 421  PPNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEK 480

Query: 1459 TEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHRV 1626
            T   P VG+ VSG+LVKK  +YQ+MAPD+L V    ST ++TQRITIP+ G F VIKHR+
Sbjct: 481  T---PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRL 537

Query: 1627 KQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILNM 1791
            ++I+ SVE  TD E       VH+RVTV+QESEKHI L W+SDP SDMVSDSIVALILN+
Sbjct: 538  EKIFESVEFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNI 597

Query: 1792 NREMIHKVVVNE----SKEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAIL 1959
            +RE + K+V+ E      EE+  K+ EKVI+ +LVSLFGDVK+G  GK+VI VD NVA L
Sbjct: 598  SRE-VPKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQL 656

Query: 1960 DKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            DKESG VESE+ GLKERVRVAF +IQ A+KPIPLS
Sbjct: 657  DKESGEVESEHSGLKERVRVAFERIQSAVKPIPLS 691


>ref|XP_002886569.1| hypothetical protein ARALYDRAFT_475225 [Arabidopsis lyrata subsp.
            lyrata] gi|297332410|gb|EFH62828.1| hypothetical protein
            ARALYDRAFT_475225 [Arabidopsis lyrata subsp. lyrata]
          Length = 693

 Score =  940 bits (2429), Expect = 0.0
 Identities = 482/695 (69%), Positives = 555/695 (79%), Gaps = 15/695 (2%)
 Frame = +1

Query: 25   MAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGI 204
            MA   +SLKR    I+R+GDQLIVTPLGAG+EVGRSCVYMS++GK +LFDCGIHPAYSG+
Sbjct: 1    MASSSASLKRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGM 60

Query: 205  GALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSDY 384
             ALP+FDEIDPS IDVLL+THFH+DH ASLPYFLEKT+F GRVFMTHATKAIYKLLL+DY
Sbjct: 61   AALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDY 120

Query: 385  VKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDID 564
            VKVSK S EDML+DEQDI  SMDKIEVIDFHQT+EVNGI+FWCY AGHVLGAAMFMVDI 
Sbjct: 121  VKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIA 180

Query: 565  SIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKTI 744
             +RILYTGDYS EE+RHL AAE P FSPD+CIIESTSG+QLH+S+H REKRFTDVIH T+
Sbjct: 181  GVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTV 240

Query: 745  SQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSMN 924
            +QGGRVLIP              DEYW+NHP+LH+IPIYYAS LAK+CM VYQTYI SMN
Sbjct: 241  AQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMN 300

Query: 925  VRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKRN 1104
             RIRNQ A SNPFVFKHI  LNSI++F DVGPSVVMA+PGGLQSG SRQLFD WC DK+N
Sbjct: 301  DRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKN 360

Query: 1105 ACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDELD 1284
            ACII G  VEGTLAKTI+++P EVT          M +H ISFSAHAD+ QTS FL EL 
Sbjct: 361  ACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELM 420

Query: 1285 PSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRSKRVAKVIGSLAEK 1458
            P NIILVHGE+ EM RLK+KL       N KI +PKNCE V++Y  S+++AK IG LA K
Sbjct: 421  PPNIILVHGEANEMMRLKQKLFTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAGK 480

Query: 1459 TEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHRV 1626
            T   P VG+ VSG+LVKK  +YQ+MAPD+L V    ST ++TQRITIP+ G F VIKHR+
Sbjct: 481  T---PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRL 537

Query: 1627 KQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILNM 1791
            ++I+ SVES TD E       VH+RVTV+QESEKHI L W+SDP SDMVSDSIVALILN+
Sbjct: 538  EKIFESVESSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNI 597

Query: 1792 NREMIHKVVVNE----SKEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAIL 1959
            +RE + K+VV E      EE+  K+ EKVI+ +LVSLFGDVK+G  GK+VI VD NVA L
Sbjct: 598  SRE-VPKIVVEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQL 656

Query: 1960 DKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            DKESG VESE+ GLKERVRVAF +IQ A+KPIPLS
Sbjct: 657  DKESGEVESEHSGLKERVRVAFERIQSAVKPIPLS 691


>ref|XP_002323824.2| cleavage and polyadenylation specificity factor family protein
            [Populus trichocarpa] gi|550320034|gb|EEF03957.2|
            cleavage and polyadenylation specificity factor family
            protein [Populus trichocarpa]
          Length = 695

 Score =  939 bits (2427), Expect = 0.0
 Identities = 482/694 (69%), Positives = 556/694 (80%), Gaps = 14/694 (2%)
 Frame = +1

Query: 22   AMAGQPSSLKRSNSSITREG-DQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYS 198
            A  GQ  SLKR ++ +TREG DQL +TPLGAGNEVGRSCVYMS+KGKTVLFDCGIH AYS
Sbjct: 2    ASTGQSQSLKRRDAPVTREGGDQLTLTPLGAGNEVGRSCVYMSFKGKTVLFDCGIHLAYS 61

Query: 199  GIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLS 378
            G+ ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+F+GRVFMTHATKAIYKLLL+
Sbjct: 62   GMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTHATKAIYKLLLT 121

Query: 379  DYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVD 558
            DYVKVSK S EDML+DE+DI  SMDKIEVIDFHQT++VNGI+FWCY AGHVLGAAMFMVD
Sbjct: 122  DYVKVSKVSVEDMLFDEKDINRSMDKIEVIDFHQTVDVNGIKFWCYTAGHVLGAAMFMVD 181

Query: 559  IDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHK 738
            I  +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ +H REKRFTDVIH 
Sbjct: 182  IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHIREKRFTDVIHS 241

Query: 739  TISQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINS 918
            TIS GGRVLIP              DEYWSNHPELH+IP+YYAS LAK+CMTVYQTYI S
Sbjct: 242  TISLGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPVYYASPLAKKCMTVYQTYILS 301

Query: 919  MNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDK 1098
            MN RIRNQ A SNPF FKHI  LNSIE+F DVGPSVVMA+PGGLQSG SRQLFD WC DK
Sbjct: 302  MNERIRNQFADSNPFKFKHISPLNSIEDFTDVGPSVVMATPGGLQSGLSRQLFDMWCSDK 361

Query: 1099 RNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDE 1278
            +NAC+I G  VEGTLAKTI+++P EV           M +H ISFSAHAD+ QTS FL E
Sbjct: 362  KNACVIPGFLVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKE 421

Query: 1279 LDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRSKRVAKVIGSLA 1452
            L P NIILVHGE+ EMGRLK+KLI      N KI +PKNC+ V++Y  S+++AK  G LA
Sbjct: 422  LMPPNIILVHGEANEMGRLKQKLITEFTDGNTKIITPKNCQSVEMYFNSEKMAKTTGKLA 481

Query: 1453 EKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKH 1620
            E+T   P VGE VSG+LVKK  +YQ+MAP+DL V    ST ++TQRITIP+SG F VIKH
Sbjct: 482  ERT---PDVGETVSGILVKKGFTYQIMAPEDLHVFSQLSTGNITQRITIPFSGAFGVIKH 538

Query: 1621 RVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALIL 1785
            R++QIY SVES TD E       VH+ VTV+QES++HI L WT+DP SDMVSDSIVAL+L
Sbjct: 539  RLEQIYESVESGTDEESGSPTLQVHELVTVKQESDRHISLHWTADPISDMVSDSIVALVL 598

Query: 1786 NMNREMIHKVVVNE--SKEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAIL 1959
            N++RE+   +V +E    EE+ EK+AEKVI+  LVSLFGDVK+G  GK+VI+VD NVA L
Sbjct: 599  NISREVPKVIVESEDIKSEEENEKKAEKVIYAFLVSLFGDVKLGENGKLVISVDGNVAEL 658

Query: 1960 DKESGVVESENEGLKERVRVAFRQIQIAMKPIPL 2061
            DK+SG VESENEGLKERVR AFR+IQ A++PIPL
Sbjct: 659  DKQSGDVESENEGLKERVRTAFRRIQSAVRPIPL 692


>ref|XP_004485469.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like [Cicer arietinum]
          Length = 687

 Score =  939 bits (2427), Expect = 0.0
 Identities = 483/689 (70%), Positives = 560/689 (81%), Gaps = 14/689 (2%)
 Frame = +1

Query: 40   SSLKRSNS-SITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGIGALP 216
            SS+KR NS S  ++ DQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSG+ ALP
Sbjct: 2    SSVKRLNSVSSNKDEDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGMAALP 61

Query: 217  FFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSDYVKVS 396
            +FDEIDPS +DVLL+THFHLDH ASLPYFLEKT+F+GRVFMT+ATKAIYKLLLSDYVKVS
Sbjct: 62   YFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFRGRVFMTYATKAIYKLLLSDYVKVS 121

Query: 397  KTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDIDSIRI 576
            K S EDML+DEQDI  SMDKIEVIDFHQTLEVNGIRFWCY AGHVLGAAMFMVDI  +R+
Sbjct: 122  KVSIEDMLFDEQDINRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRV 181

Query: 577  LYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKTISQGG 756
            LYTGDYS EE+RHL AAETP FSPDVCIIEST G+Q H+ +H REKRFTDVIH TISQGG
Sbjct: 182  LYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGG 241

Query: 757  RVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSMNVRIR 936
            RVLIP              DEYW+NHPEL +IPIYYAS LAK+C+TVY+TY  SMN RI+
Sbjct: 242  RVLIPAFALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRIQ 301

Query: 937  NQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKRNACII 1116
            N  A SNPF FKHI +L+SI+ FKDVGPSVVMASPGGLQSG SRQLFD WC DK+NAC+I
Sbjct: 302  N--AKSNPFSFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNACVI 359

Query: 1117 SGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDELDPSNI 1296
             G  VEGTLAKTI+++P EVT          M +H ISFSAHAD  QTSAFL+EL+P NI
Sbjct: 360  PGYVVEGTLAKTIINEPKEVTLMNGLSAPLNMQVHYISFSAHADSAQTSAFLEELNPPNI 419

Query: 1297 ILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAEKTEKI 1470
            ILVHGE+ EMGRLK+KL ++ +  N KI +PKNC+ V++Y  S+++AK IG LAEKT   
Sbjct: 420  ILVHGEANEMGRLKQKLTSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKT--- 476

Query: 1471 PKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHRVKQIY 1638
            P+VGE VSGLLVKK  +YQ+MAPDDL V    ST ++TQRITIPYSG FSVI+HR+KQIY
Sbjct: 477  PEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFSVIQHRLKQIY 536

Query: 1639 SSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILNMNREM 1803
             SVE   D E      LVH+RVTV+ E+EKH+ L WTSDP SDMVSDS+VAL+LN++R++
Sbjct: 537  ESVELSVDEESGVPTLLVHERVTVKHETEKHVSLHWTSDPISDMVSDSVVALVLNISRDL 596

Query: 1804 IHKVVVNESK--EEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILDKESGV 1977
               +  +++   EE  EK+AEKV+H +L SLFGDVKVG  GK++IN+D NVA L+KESG 
Sbjct: 597  PKIMAESDAVKIEEANEKKAEKVMHALLNSLFGDVKVGENGKLIINIDGNVAELNKESGE 656

Query: 1978 VESENEGLKERVRVAFRQIQIAMKPIPLS 2064
            VESENEGLKERVR AFR+IQ ++KPIPLS
Sbjct: 657  VESENEGLKERVRTAFRRIQSSVKPIPLS 685


>ref|XP_003540154.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I isoform X1 [Glycine max]
            gi|571493830|ref|XP_006592669.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 3-I isoform X2
            [Glycine max]
          Length = 689

 Score =  931 bits (2406), Expect = 0.0
 Identities = 477/687 (69%), Positives = 555/687 (80%), Gaps = 15/687 (2%)
 Frame = +1

Query: 49   KRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGIGALPFFDE 228
            +R N+  +RE DQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSG+ ALP+FDE
Sbjct: 8    RRENARSSREEDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGMAALPYFDE 67

Query: 229  IDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSDYVKVSKTSF 408
            IDPS +DVLL+THFHLDH ASLPYFLEKT+F+GRVFMT+ATKAIYKLLLSD+VKVSK S 
Sbjct: 68   IDPSTVDVLLITHFHLDHAASLPYFLEKTTFRGRVFMTYATKAIYKLLLSDFVKVSKVSV 127

Query: 409  EDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDIDSIRILYTG 588
            EDML+DEQDI  SMDKIEVIDFHQT+EVNGIRFWCY AGHVLGAAMFMVDI  +R+LYTG
Sbjct: 128  EDMLFDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG 187

Query: 589  DYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKTISQGGRVLI 768
            DYS EE+RHL AAETP FSPDVCIIEST G+Q H+ +H REKRFTDVIH TISQGGRVLI
Sbjct: 188  DYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLI 247

Query: 769  PXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSMNVRIRNQVA 948
            P              DEYW+NHPEL +IPIYYAS LAK+C+TVY+TY  SMN RI+N  A
Sbjct: 248  PAFALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRIQN--A 305

Query: 949  ISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKRNACIISGLA 1128
             SNPF FKH+ +L+SIE FKDVGPSVVMASPGGLQSG SRQLFD WC DK+N+C++ G  
Sbjct: 306  KSNPFSFKHVSALSSIEVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVLPGYV 365

Query: 1129 VEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDELDPSNIILVH 1308
            VEGTLAKTI+++P EVT          M +H ISFSAHAD  QTSAFL+EL+P NIILVH
Sbjct: 366  VEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADSAQTSAFLEELNPPNIILVH 425

Query: 1309 GESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRSKRVAKVIGSLAEKTEKIPKVG 1482
            GE+ EMGRLK+KLI++ +  N KI +PKNC+ V++Y  S+++AK IG LAEKT   P+VG
Sbjct: 426  GEANEMGRLKQKLISQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKT---PEVG 482

Query: 1483 EIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHRVKQIYSSVE 1650
            E VSGLLVKK  +YQ+MA DDL V    ST ++TQRITIPYSG F+VI+HR+KQIY SV 
Sbjct: 483  ETVSGLLVKKGFTYQIMAADDLHVFSQLSTANITQRITIPYSGAFNVIQHRLKQIYESVA 542

Query: 1651 SLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILNMNREMIHKV 1815
               D E       VH+ VTV+ ESEKH+ L W SDP SDMVSDSIVAL+LN+NR++    
Sbjct: 543  QSVDEESGVPTLQVHECVTVKHESEKHVSLHWASDPMSDMVSDSIVALVLNINRDV--PK 600

Query: 1816 VVNESK----EEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILDKESGVVE 1983
            +VNES     EE+ EK+AEKV+  +LVSLFGDVKVG  GK++IN+D NVA L+KESG VE
Sbjct: 601  IVNESDAIKIEEENEKKAEKVMQALLVSLFGDVKVGENGKLIINIDGNVAELNKESGEVE 660

Query: 1984 SENEGLKERVRVAFRQIQIAMKPIPLS 2064
            SENEGLKERVR AFR+IQ ++KPIP+S
Sbjct: 661  SENEGLKERVRTAFRRIQSSVKPIPVS 687


>gb|EYU26513.1| hypothetical protein MIMGU_mgv1a002259mg [Mimulus guttatus]
          Length = 694

 Score =  930 bits (2403), Expect = 0.0
 Identities = 480/695 (69%), Positives = 550/695 (79%), Gaps = 15/695 (2%)
 Frame = +1

Query: 22   AMAGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSG 201
            A  GQP+S  +  SS + EGD+LI+TPLGAGNEVGRSCV+MSYKGKTV+FDCGIHPA+SG
Sbjct: 2    ASTGQPASSLKRASSTSSEGDELIITPLGAGNEVGRSCVHMSYKGKTVMFDCGIHPAFSG 61

Query: 202  IGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSD 381
            + ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+F+GRVFMTHATKAIYKLLLSD
Sbjct: 62   MAALPYFDEIDPSAIDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTHATKAIYKLLLSD 121

Query: 382  YVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDI 561
            YVKVSK S EDMLYDEQDIL SMDKIEVIDFHQTLEVNG+RFWCY AGHVLGAAMFMVDI
Sbjct: 122  YVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGVRFWCYTAGHVLGAAMFMVDI 181

Query: 562  DSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKT 741
              +R+LYTGDYS EE+RHL AAE P FSPDVCIIEST G+Q H+ +H REK FTDVIH T
Sbjct: 182  AGVRVLYTGDYSREEDRHLRAAELPQFSPDVCIIESTYGVQTHQPRHIREKLFTDVIHST 241

Query: 742  ISQGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSM 921
            +SQGGRVLIP              DEYWSNHPELH++PIYYAS LAKRCM VYQTYINSM
Sbjct: 242  VSQGGRVLIPAYALGRAQELLLILDEYWSNHPELHNVPIYYASPLAKRCMAVYQTYINSM 301

Query: 922  NVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKR 1101
            N RIRNQ A SNPF FKHI  L SI+ F+DVGP+VVMASPGGLQSG SRQLFDKWC DK+
Sbjct: 302  NDRIRNQFANSNPFDFKHISPLKSIDEFRDVGPAVVMASPGGLQSGLSRQLFDKWCSDKK 361

Query: 1102 NACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDEL 1281
            NAC+I G  VEGT+AKTI+++P EVT          M +H ISFSAHAD+ QTS FL EL
Sbjct: 362  NACVIPGYVVEGTMAKTIINEPKEVTLASGLTAPLNMQVHYISFSAHADYIQTSTFLKEL 421

Query: 1282 DPSNIILVHGESKEMGRLKEKLIA--RRSNMKIFSPKNCERVQIYLRSKRVAKVIGSLAE 1455
             P NIILVHG S EMGRLK+KL++     N KI +PKNC+ V+++  S++ AK IG LA 
Sbjct: 422  MPPNIILVHGGSIEMGRLKQKLVSLFADGNTKIITPKNCQSVEMHFNSQKTAKAIGKLAA 481

Query: 1456 KTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHR 1623
            K    P  GE VSGLLVKK  +YQ+MAP+DL V    ST ++ QRITIPYSG F+VIKHR
Sbjct: 482  KP---PAAGETVSGLLVKKGFTYQIMAPEDLHVFSQLSTGNVIQRITIPYSGAFAVIKHR 538

Query: 1624 VKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILN 1788
            +KQIY SV+   D E       VH+RVTV++ESE H+ L W +DP SDMVSDS+VAL+LN
Sbjct: 539  LKQIYESVDPTIDEESGVEALRVHERVTVKRESENHVSLHWAADPISDMVSDSVVALVLN 598

Query: 1789 MNREMIHKVVVNESKEEDGE---KRAEKVIHGILVSLFGDVKVGA-EGKMVINVDANVAI 1956
             +R+ + KVVV ES+E  GE   K+ +K++H +LVSLFGDVK G  EGK+VINVD NVA 
Sbjct: 599  ASRD-LPKVVV-ESEETGGEEAAKKGDKIVHALLVSLFGDVKYGGEEGKVVINVDGNVAH 656

Query: 1957 LDKESGVVESENEGLKERVRVAFRQIQIAMKPIPL 2061
            LDK SG VESENEGLKERVR AFR+I  A+KPIPL
Sbjct: 657  LDKRSGEVESENEGLKERVRTAFRRISGAVKPIPL 691


>ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group] gi|27573349|gb|AAO20067.1|
            putative cleavage and polyadenylation specifity factor
            protein [Oryza sativa Japonica Group]
            gi|29126360|gb|AAO66552.1| putative cleavage and
            polyadenylation specifity factor [Oryza sativa Japonica
            Group] gi|108712151|gb|ABF99946.1| Cleavage and
            polyadenylation specificity factor, 73 kDa subunit,
            putative, expressed [Oryza sativa Japonica Group]
            gi|113550399|dbj|BAF13842.1| Os03g0852900 [Oryza sativa
            Japonica Group] gi|125588676|gb|EAZ29340.1| hypothetical
            protein OsJ_13407 [Oryza sativa Japonica Group]
          Length = 700

 Score =  926 bits (2392), Expect = 0.0
 Identities = 467/690 (67%), Positives = 552/690 (80%), Gaps = 12/690 (1%)
 Frame = +1

Query: 28   AGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGIG 207
            AG P   ++++    REGDQLI+TPLGAGNEVGRSCVYMS+KG+TVLFDCGIHPAYSG+ 
Sbjct: 13   AGGPPGKRQASGG--REGDQLIITPLGAGNEVGRSCVYMSFKGRTVLFDCGIHPAYSGMA 70

Query: 208  ALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSDYV 387
            ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+FKGRVFMTHATKAIY+LLLSDYV
Sbjct: 71   ALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLSDYV 130

Query: 388  KVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDIDS 567
            KVSK S EDML+DEQDIL SMDKIEVIDFHQTLEVNGIRFWCY AGHVLGAAMFMVDI  
Sbjct: 131  KVSKVSVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAG 190

Query: 568  IRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKTIS 747
            +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+Q H+ +H REKRFTDVIH T+S
Sbjct: 191  VRVLYTGDYSREEDRHLKAAELPQFSPDICIIESTYGVQQHQPRHVREKRFTDVIHTTVS 250

Query: 748  QGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSMNV 927
            QGGRVLIP              DEYW+NHPELH IPIYYAS LAK+CM VYQTYINSMN 
Sbjct: 251  QGGRVLIPAFALGRAQELLLILDEYWANHPELHKIPIYYASPLAKKCMAVYQTYINSMNE 310

Query: 928  RIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKRNA 1107
            RIRNQ A SNPF FKHI SLNSI+NF DVGPSVVMASPGGLQSG SRQLFDKWC DK+N+
Sbjct: 311  RIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPGGLQSGLSRQLFDKWCTDKKNS 370

Query: 1108 CIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDELDP 1287
            C+I G  VEGTLAKTI+++P EVT          M +H ISFSAHADF QTS FLDEL P
Sbjct: 371  CVIPGYVVEGTLAKTIINEPREVTLANGLTAPLHMQVHYISFSAHADFPQTSTFLDELQP 430

Query: 1288 SNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRSKRVAKVIGSLAEKT 1461
             NI+LVHGE+ EM RLK+KLI++   +N+K+ +PKNC+ V++Y  S+++AK IG LA   
Sbjct: 431  PNIVLVHGEANEMSRLKQKLISQFDGTNIKVVNPKNCQSVEMYFSSEKMAKTIGRLA--- 487

Query: 1462 EKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHRVK 1629
            EK+P+ GE V+GLLVKK  +YQ+MAP+DL V    ST ++TQRI +PYSG F VIK+R+K
Sbjct: 488  EKVPEAGESVNGLLVKKGFTYQIMAPEDLRVYTQLSTANITQRIAVPYSGSFEVIKYRLK 547

Query: 1630 QIYSSVESLTDNE----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILNMNR 1797
            QIY SVES T+       +VH+RVT+R ESE ++ L W+SDP SDMVSDS+VA++LN+ R
Sbjct: 548  QIYESVESSTEESDVPTLIVHERVTIRLESESYVTLQWSSDPISDMVSDSVVAMVLNIGR 607

Query: 1798 EMIHKVVVNES--KEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILDKES 1971
            E    V V E+   +E+ E+ A+KV++ ++VSLFGDVKV  EGK+VI+VD  VA LD  S
Sbjct: 608  EGPKVVPVEEAVKTQEETERVAQKVVYALMVSLFGDVKVAEEGKLVISVDGQVAHLDGRS 667

Query: 1972 GVVESENEGLKERVRVAFRQIQIAMKPIPL 2061
            G VE EN  L+ER++ AFR+IQ A++PIPL
Sbjct: 668  GGVECENATLRERIKTAFRRIQGAVRPIPL 697


>gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indica Group]
          Length = 700

 Score =  926 bits (2392), Expect = 0.0
 Identities = 467/690 (67%), Positives = 552/690 (80%), Gaps = 12/690 (1%)
 Frame = +1

Query: 28   AGQPSSLKRSNSSITREGDQLIVTPLGAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGIG 207
            AG P   ++++    REGDQLI+TPLGAGNEVGRSCVYMS+KG+TVLFDCGIHPAYSG+ 
Sbjct: 13   AGGPPGKRQASGG--REGDQLIITPLGAGNEVGRSCVYMSFKGRTVLFDCGIHPAYSGMA 70

Query: 208  ALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHATKAIYKLLLSDYV 387
            ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+FKGRVFMTHATKAIY+LLLSDYV
Sbjct: 71   ALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLSDYV 130

Query: 388  KVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGHVLGAAMFMVDIDS 567
            KVSK S EDML+DEQDIL SMDKIEVIDFHQTLEVNGIRFWCY AGHVLGAAMFMVDI  
Sbjct: 131  KVSKVSVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAG 190

Query: 568  IRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDREKRFTDVIHKTIS 747
            +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+Q H+ +H REKRFTDVIH T+S
Sbjct: 191  VRVLYTGDYSREEDRHLKAAELPQFSPDICIIESTYGVQQHQPRHVREKRFTDVIHTTVS 250

Query: 748  QGGRVLIPXXXXXXXXXXXXXXDEYWSNHPELHHIPIYYASLLAKRCMTVYQTYINSMNV 927
            QGGRVLIP              DEYW+NHPELH IPIYYAS LAK+CM VYQTYINSMN 
Sbjct: 251  QGGRVLIPAFALGRAQELLLILDEYWANHPELHKIPIYYASPLAKKCMAVYQTYINSMNE 310

Query: 928  RIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSRQLFDKWCYDKRNA 1107
            RIRNQ A SNPF FKHI SLNSI+NF DVGPSVVMASPGGLQSG SRQLFDKWC DK+N+
Sbjct: 311  RIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPGGLQSGLSRQLFDKWCTDKKNS 370

Query: 1108 CIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXXMSIHRISFSAHADFKQTSAFLDELDP 1287
            C+I G  VEGTLAKTI+++P EVT          M +H ISFSAHADF QTS FLDEL P
Sbjct: 371  CVIPGYVVEGTLAKTIINEPREVTLANGLTAPLHMQVHYISFSAHADFPQTSTFLDELQP 430

Query: 1288 SNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRSKRVAKVIGSLAEKT 1461
             NI+LVHGE+ EM RLK+KLI++   +N+K+ +PKNC+ V++Y  S+++AK IG LA   
Sbjct: 431  PNIVLVHGEANEMSRLKQKLISQFDGTNIKVVNPKNCQSVEMYFSSEKMAKTIGRLA--- 487

Query: 1462 EKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIPYSGVFSVIKHRVK 1629
            EK+P+ GE V+GLLVKK  +YQ+MAP+DL V    ST ++TQRI +PYSG F VIK+R+K
Sbjct: 488  EKVPEAGESVNGLLVKKGFTYQIMAPEDLRVYTQLSTANITQRIAVPYSGSFEVIKYRLK 547

Query: 1630 QIYSSVESLTDNE----FLVHDRVTVRQESEKHILLTWTSDPTSDMVSDSIVALILNMNR 1797
            QIY SVES T+       +VH+RVT+R ESE ++ L W+SDP SDMVSDS+VA++LN+ R
Sbjct: 548  QIYESVESSTEESDVPTLIVHERVTIRLESESYVTLQWSSDPISDMVSDSVVAMVLNIGR 607

Query: 1798 EMIHKVVVNES--KEEDGEKRAEKVIHGILVSLFGDVKVGAEGKMVINVDANVAILDKES 1971
            E    V V E+   +E+ E+ A+KV++ ++VSLFGDVKV  EGK+VI+VD  VA LD  S
Sbjct: 608  EGPKVVPVEEAVKTQEETERVAQKVVYALMVSLFGDVKVAEEGKLVISVDGQVAHLDGRS 667

Query: 1972 GVVESENEGLKERVRVAFRQIQIAMKPIPL 2061
            G VE EN  L+ER++ AFR+IQ A++PIPL
Sbjct: 668  GDVECENATLRERIKTAFRRIQGAVRPIPL 697