BLASTX nr result
ID: Paeonia24_contig00008184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00008184
(2120 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFJ66169.1| hypothetical protein 11M19.13 [Arabidopsis halleri] 752 0.0
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ... 637 e-180
gb|AAG52211.1|AC022288_10 hypothetical protein; 74056-75837 [Ara... 600 e-169
dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis t... 589 e-165
gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsi... 580 e-163
gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana] 539 e-150
gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcrip... 539 e-150
gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein ... 484 e-134
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g... 467 e-129
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 467 e-129
gb|ABW74561.1| reverse transcriptase [Boechera divaricarpa] 464 e-128
gb|ABF94034.1| retrotransposon protein, putative, unclassified [... 438 e-120
emb|CAH67713.1| H0512B01.8 [Oryza sativa Indica Group] 436 e-119
ref|NP_001060934.2| Os08g0133100 [Oryza sativa Japonica Group] g... 434 e-119
emb|CCI55340.1| PH01B019A14.9 [Phyllostachys edulis] 426 e-116
emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group] 422 e-115
ref|NP_001061718.1| Os08g0389500 [Oryza sativa Japonica Group] g... 421 e-115
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 419 e-114
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 419 e-114
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 417 e-114
>gb|AFJ66169.1| hypothetical protein 11M19.13 [Arabidopsis halleri]
Length = 1273
Score = 752 bits (1942), Expect = 0.0
Identities = 372/422 (88%), Positives = 398/422 (94%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEV+GEE KVYKLSKALYGLKQAPRAWN
Sbjct: 772 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVKGEEHKVYKLSKALYGLKQAPRAWN 831
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
T LDQILKE KFKKC+ ENSVYRKEEEGTLLIVA+YVDDLFVMG+TLKVI EFKK+MSSK
Sbjct: 832 TNLDQILKEFKFKKCSTENSVYRKEEEGTLLIVAVYVDDLFVMGDTLKVICEFKKDMSSK 891
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEMSDLGKLTYYLG+EV QGEEGIEIKQEAYAR+IL+EAG++ CN TKIPMMFGLQVSKA
Sbjct: 892 FEMSDLGKLTYYLGMEVRQGEEGIEIKQEAYARKILLEAGIEPCNPTKIPMMFGLQVSKA 951
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
QEEPEIDPT YRRN+GCLRYLLHTR DLAFAVGVASRYMQSPRKSHG+IMKQILRYLKGT
Sbjct: 952 QEEPEIDPTSYRRNIGCLRYLLHTRPDLAFAVGVASRYMQSPRKSHGEIMKQILRYLKGT 1011
Query: 1400 MAYGLKFGRGGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSSC 1221
M +GL+F R SKSI ++D+SHNIDQD+GRSTT HIFYF SSPISWCSQKQ TVALSSC
Sbjct: 1012 MTFGLRFSREASKSI-KYTDNSHNIDQDNGRSTTCHIFYFRSSPISWCSQKQGTVALSSC 1070
Query: 1220 EAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHKR 1041
EAEFMAATEAARQAIWLQ++LSEI GWKTEK+LIKIDNKSAIALTKNPVFHGKSKHI+KR
Sbjct: 1071 EAEFMAATEAARQAIWLQEILSEIMGWKTEKILIKIDNKSAIALTKNPVFHGKSKHIYKR 1130
Query: 1040 YHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLSKIKLKLKREI 861
YHFIRECI+ E+VDVEHVPGEEQKADILTKALARVKFG MRS+IGVQDLS I+LKLK EI
Sbjct: 1131 YHFIRECIKNEVVDVEHVPGEEQKADILTKALARVKFGVMRSMIGVQDLSSIELKLKMEI 1190
Query: 860 VG 855
VG
Sbjct: 1191 VG 1192
>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
Length = 1239
Score = 637 bits (1644), Expect = e-180
Identities = 305/422 (72%), Positives = 364/422 (86%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
++ GWE+HHLDVKTAFLHGEL E+VYV QPEGFE +GEE KV+KLSKALYGL+QAPRAWN
Sbjct: 818 SAKGWELHHLDVKTAFLHGELNEEVYVTQPEGFEKKGEEHKVFKLSKALYGLRQAPRAWN 877
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
TKLD++LK L+FKKC KE+SVYR+EE LLI+AIYVDDLFV GN+ K+I EFK MS K
Sbjct: 878 TKLDRVLKSLRFKKCMKESSVYRREEGDKLLIIAIYVDDLFVTGNSTKIIKEFKTAMSHK 937
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEMSDLG LTYYLGIEV Q GI IKQEAYA+RI+ E+G+ CN IPM FGLQ SKA
Sbjct: 938 FEMSDLGLLTYYLGIEVKQSTRGITIKQEAYAKRIMEESGMADCNPNCIPMEFGLQFSKA 997
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
+EPEID T YRR +GCLRYL+HTR D+A++VG+ SRYMQSPR+SHG+ +KQ+LRYL+GT
Sbjct: 998 LDEPEIDATQYRRKIGCLRYLMHTRPDMAYSVGILSRYMQSPRESHGNALKQVLRYLQGT 1057
Query: 1400 MAYGLKFGRGGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSSC 1221
+ +GL+F RG ++ +VG+SDSSHN D DDGRSTTGH+F G++PI+WCSQKQ TVALSSC
Sbjct: 1058 LGHGLEFKRGSTQKLVGYSDSSHNTDPDDGRSTTGHLFCLGNTPITWCSQKQDTVALSSC 1117
Query: 1220 EAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHKR 1041
EAEFMAATEAA+QAIWLQ+LLSE+TG +TEK LI +DNKSAI+L KNPVFH +SKHIHKR
Sbjct: 1118 EAEFMAATEAAKQAIWLQELLSEVTGGETEKTLILVDNKSAISLAKNPVFHRRSKHIHKR 1177
Query: 1040 YHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLSKIKLKLKREI 861
+HFIREC+E+ ++DVEHVPG EQKADILTKALA++KF EMRS+I VQ+LS+ LKLKRE
Sbjct: 1178 FHFIRECVERNLIDVEHVPGTEQKADILTKALAKIKFKEMRSMIEVQNLSENGLKLKREN 1237
Query: 860 VG 855
VG
Sbjct: 1238 VG 1239
>gb|AAG52211.1|AC022288_10 hypothetical protein; 74056-75837 [Arabidopsis thaliana]
Length = 503
Score = 600 bits (1547), Expect = e-169
Identities = 300/423 (70%), Positives = 340/423 (80%), Gaps = 1/423 (0%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
ASHGWEIHHLDVKTAFLHGELKE VYV QPEGFE +G E KVYKL+KALYGL+QAPRAWN
Sbjct: 74 ASHGWEIHHLDVKTAFLHGELKETVYVYQPEGFERKGSEDKVYKLNKALYGLRQAPRAWN 133
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
KL+ IL EL+F KC+KE SVYRKE LL++AIYVDDLFV G L +I++FK+EMSSK
Sbjct: 134 NKLNHILVELQFLKCSKEPSVYRKEVSKDLLLIAIYVDDLFVTGTNLDIINKFKEEMSSK 193
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEMS+LGKLTYYLGIEV Q ++GI + Q YA +IL EAG+ CN PM GL+ SKA
Sbjct: 194 FEMSNLGKLTYYLGIEVIQHKDGIALNQNRYALKILEEAGMIDCNRVHTPMEMGLKFSKA 253
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
+EE E+D T YR+NVGCLRYLLHTR DL++ VGV SRYMQSPR SH MKQ LRYLKGT
Sbjct: 254 EEEEEVDATAYRKNVGCLRYLLHTRPDLSYCVGVLSRYMQSPRVSHAAAMKQCLRYLKGT 313
Query: 1400 MAYGLKFGRGGS-KSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSS 1224
+ GL F R +VG+SDSSHN+D DDGRST GH+FY G SPI+WCS KQ VALSS
Sbjct: 314 TSLGLIFKRCEKIPKLVGYSDSSHNVDPDDGRSTAGHVFYLGESPITWCSSKQDVVALSS 373
Query: 1223 CEAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHK 1044
CEAEFMA TEAA+QAIWLQ+LLSEITG KV I IDNKSAIALTKNPVFHG+SKHIH+
Sbjct: 374 CEAEFMAGTEAAKQAIWLQELLSEITGTVCGKVTILIDNKSAIALTKNPVFHGRSKHIHR 433
Query: 1043 RYHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLSKIKLKLKRE 864
RYHFIREC+E ++VEHVPG EQKADILTKAL R+KF EMR L+GVQD+ K KLK E
Sbjct: 434 RYHFIRECVETGQIEVEHVPGNEQKADILTKALGRIKFKEMRDLVGVQDVVKEDFKLKGE 493
Query: 863 IVG 855
VG
Sbjct: 494 NVG 496
>dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1250
Score = 589 bits (1518), Expect = e-165
Identities = 287/426 (67%), Positives = 344/426 (80%), Gaps = 9/426 (2%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
AS+GWE+HHLDVKTAFLHGELKE V+V QPEGF +G E KVYKL+KALYGL+QAPRAWN
Sbjct: 807 ASNGWEVHHLDVKTAFLHGELKEIVFVSQPEGFTEKGSEGKVYKLNKALYGLRQAPRAWN 866
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
KL++IL ELKF KC+KE S+YRK+E+ LL+V +YVDDL + G++LK+I++FKK M+SK
Sbjct: 867 NKLNKILGELKFVKCSKEPSLYRKQEKDDLLLVEVYVDDLLISGSSLKLINDFKKGMASK 926
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEMSDLG LTYYLGIEV Q GI +KQ YA +IL E + CN+ IPM GL++SKA
Sbjct: 927 FEMSDLGLLTYYLGIEVIQYNGGIMLKQGRYAEKILDETKMSDCNAVHIPMNSGLKLSKA 986
Query: 1580 ---------QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMK 1428
+ E I+P YRRN+GCLRYLLHTR DL++ VGV SRYMQ P++ HG MK
Sbjct: 987 GTEKGSHDSETEKNIEPKEYRRNIGCLRYLLHTRPDLSYCVGVLSRYMQEPKEGHGVAMK 1046
Query: 1427 QILRYLKGTMAYGLKFGRGGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQK 1248
QILRYL+GT +YGL F RG ++GFSDSSHN+D+DDGRSTTGHIFY S I+WC+QK
Sbjct: 1047 QILRYLRGTTSYGLSFKRGDKSGLIGFSDSSHNVDEDDGRSTTGHIFYLDGSLITWCTQK 1106
Query: 1247 QSTVALSSCEAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFH 1068
Q TVALSSCEAEFMAATE A+QAIWLQ+LL E+TG +KV + IDNKSAIAL KNPVFH
Sbjct: 1107 QETVALSSCEAEFMAATEGAKQAIWLQELLGEVTGEACKKVRLLIDNKSAIALAKNPVFH 1166
Query: 1067 GKSKHIHKRYHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLSK 888
G+SKHIHKRYHFIREC+E E ++VEHVPGEEQKA++LTKAL R+KF EMR L+GVQ+LSK
Sbjct: 1167 GRSKHIHKRYHFIRECVENEQIEVEHVPGEEQKANLLTKALGRIKFKEMRELVGVQELSK 1226
Query: 887 IKLKLK 870
+ KLK
Sbjct: 1227 CEFKLK 1232
>gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1307
Score = 580 bits (1496), Expect = e-163
Identities = 282/422 (66%), Positives = 341/422 (80%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
AS+GWE+HHLDVKTAFLHGEL+EDVYV QPEGF + E KVYKL KALYGLKQAPRAWN
Sbjct: 879 ASNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWN 938
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
TKL++IL+EL F KC+KE SVYR++EE LLIVAIYVDDL V G++L +I FKK+M+ K
Sbjct: 939 TKLNKILQELNFVKCSKEPSVYRRQEEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGK 998
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEMSDLG+LTYYLGIEV + GI ++QE YA +I+ EAG+ CN IPM GL++ KA
Sbjct: 999 FEMSDLGQLTYYLGIEVLHRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKA 1058
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
QEE I YRR +GCLRY++HTR DL++ VGV SRY+Q PR+SHG+ +KQ+LRYLKGT
Sbjct: 1059 QEEKCITERDYRRMIGCLRYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGT 1118
Query: 1400 MAYGLKFGRGGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSSC 1221
M++GL RG +VG+SDSSH+ D DDG+ST GHIFY PI+WCSQKQ VALSSC
Sbjct: 1119 MSHGLYLKRGFKSGLVGYSDSSHSADLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSC 1178
Query: 1220 EAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHKR 1041
EAEFMAATEAA+QAIWLQDL +E+ G +EKV+I++DNKSAIALTKN VFHG+SKHIH+R
Sbjct: 1179 EAEFMAATEAAKQAIWLQDLFAEVCGTTSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRR 1238
Query: 1040 YHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLSKIKLKLKREI 861
YHFIREC+E +V+V+HVPG EQ+ADILTK L R+KF EMR L+GVQ + + KLK E
Sbjct: 1239 YHFIRECVENNLVEVDHVPGVEQRADILTKPLGRIKFREMRELVGVQCVLEDDFKLKGEF 1298
Query: 860 VG 855
VG
Sbjct: 1299 VG 1300
>gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]
Length = 1188
Score = 539 bits (1388), Expect = e-150
Identities = 276/427 (64%), Positives = 323/427 (75%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
ASHGWEIHHLDVKTAFLHGELKE VYV Q EGFE +G E+KVY+L+KALYGL+QAPRAWN
Sbjct: 782 ASHGWEIHHLDVKTAFLHGELKETVYVCQLEGFEKQGREEKVYRLNKALYGLRQAPRAWN 841
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
KL+ IL EL + KC+KE SVYRK+ ++IVA+YVDDLFV G +L++I +FKKEMSSK
Sbjct: 842 NKLNNILMELGYNKCSKEPSVYRKQVSNHVMIVAVYVDDLFVTGTSLELILKFKKEMSSK 901
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEMSDLG L+YYLGIEV Q +GI + Q YA +IL E G+ CN PM + SK
Sbjct: 902 FEMSDLGLLSYYLGIEVIQHSKGITLNQSRYAIKILEETGMKDCNLVHTPMDPSYKPSKV 961
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
+ E E+D T YRRN+GCLRYLLHTR DL+++VGV SRYMQSPR+SH MK LRYLKGT
Sbjct: 962 ETEKEVDATVYRRNIGCLRYLLHTRPDLSYSVGVLSRYMQSPRESHAAAMKHCLRYLKGT 1021
Query: 1400 MAYGLKFGRGGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSSC 1221
++ GL + R + G+SDSSHN+D DDGRSTTG++FY G SPISW S+K TVA+SSC
Sbjct: 1022 ISLGLLYNRCDKAKLNGYSDSSHNVDPDDGRSTTGNVFYLGESPISWWSKKHDTVAMSSC 1081
Query: 1220 EAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHKR 1041
EAEFMA TEAA+QAIWLQDLLSEITG +EKV I IDNKSAIALTKNPVFHG+
Sbjct: 1082 EAEFMAGTEAAKQAIWLQDLLSEITGNSSEKVTIFIDNKSAIALTKNPVFHGRK------ 1135
Query: 1040 YHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLSKIKLKLKREI 861
V HVPGEEQKADILTKAL R+KF EMR LIGV+D+ K +LK EI
Sbjct: 1136 --------------VTHVPGEEQKADILTKALERIKFKEMRDLIGVRDMEKEDFELKGEI 1181
Query: 860 VG*ASMT 840
VG +S T
Sbjct: 1182 VGVSSKT 1188
>gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcriptase proteins [Arabidopsis
thaliana]
Length = 833
Score = 539 bits (1388), Expect = e-150
Identities = 276/427 (64%), Positives = 323/427 (75%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
ASHGWEIHHLDVKTAFLHGELKE VYV Q EGFE +G E+KVY+L+KALYGL+QAPRAWN
Sbjct: 427 ASHGWEIHHLDVKTAFLHGELKETVYVCQLEGFEKQGREEKVYRLNKALYGLRQAPRAWN 486
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
KL+ IL EL + KC+KE SVYRK+ ++IVA+YVDDLFV G +L++I +FKKEMSSK
Sbjct: 487 NKLNNILMELGYNKCSKEPSVYRKQVSNHVMIVAVYVDDLFVTGTSLELILKFKKEMSSK 546
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEMSDLG L+YYLGIEV Q +GI + Q YA +IL E G+ CN PM + SK
Sbjct: 547 FEMSDLGLLSYYLGIEVIQHSKGITLNQSRYAIKILEETGMKDCNLVHTPMDPSYKPSKV 606
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
+ E E+D T YRRN+GCLRYLLHTR DL+++VGV SRYMQSPR+SH MK LRYLKGT
Sbjct: 607 ETEKEVDATVYRRNIGCLRYLLHTRPDLSYSVGVLSRYMQSPRESHAAAMKHCLRYLKGT 666
Query: 1400 MAYGLKFGRGGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSSC 1221
++ GL + R + G+SDSSHN+D DDGRSTTG++FY G SPISW S+K TVA+SSC
Sbjct: 667 ISLGLLYNRCDKAKLNGYSDSSHNVDPDDGRSTTGNVFYLGESPISWWSKKHDTVAMSSC 726
Query: 1220 EAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHKR 1041
EAEFMA TEAA+QAIWLQDLLSEITG +EKV I IDNKSAIALTKNPVFHG+
Sbjct: 727 EAEFMAGTEAAKQAIWLQDLLSEITGNSSEKVTIFIDNKSAIALTKNPVFHGRK------ 780
Query: 1040 YHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLSKIKLKLKREI 861
V HVPGEEQKADILTKAL R+KF EMR LIGV+D+ K +LK EI
Sbjct: 781 --------------VTHVPGEEQKADILTKALERIKFKEMRDLIGVRDMEKEDFELKGEI 826
Query: 860 VG*ASMT 840
VG +S T
Sbjct: 827 VGVSSKT 833
>gb|AAF63110.1|AC006423_11 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1150
Score = 484 bits (1246), Expect = e-134
Identities = 261/425 (61%), Positives = 314/425 (73%), Gaps = 3/425 (0%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
AS+GWEIHHLDVK AFLHGELKE VYV QP+GF+ +G E KVYKL+KALYGL+QA RAWN
Sbjct: 738 ASNGWEIHHLDVKIAFLHGELKETVYVTQPKGFKEKGHEDKVYKLNKALYGLRQASRAWN 797
Query: 1940 TKLDQILKELKFKKCTKENSVYRK-EEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSS 1764
KL+++LKELKF+KC+KE SVYRK E L+VA+YVDDLFV G K+I +FK+EMSS
Sbjct: 798 NKLNRVLKELKFEKCSKEPSVYRKVMGENITLLVAVYVDDLFVTGTNTKIIDDFKREMSS 857
Query: 1763 KFEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSK 1584
KFEMSDLGKL YYL IEVCQ EEGI + Q YA+RIL EA + CN PM GLQ+SK
Sbjct: 858 KFEMSDLGKLIYYLEIEVCQHEEGITLTQHRYAKRILEEARMLDCNLVHTPMESGLQLSK 917
Query: 1583 AQEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKG 1404
+ EE +ID T +R+N L+ ++ GV+ QS ++ + K+ +
Sbjct: 918 SAEENDIDATRFRKNP------LYAKTK-----GVS----QSCYETMFKVCKR--HHYTW 960
Query: 1403 TMAYGLKFGRGGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFG--SSPISWCSQKQSTVAL 1230
+ F K +VG+SD SHN+D DDGRST G+IFY G SS ISWCSQKQ VA+
Sbjct: 961 FNIWAFHFYDAKPK-LVGYSDRSHNVDPDDGRSTAGYIFYLGESSSLISWCSQKQDIVAM 1019
Query: 1229 SSCEAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHI 1050
SSCEAEFMA TEAARQ IWLQDLL E+TG EKV+++IDNKSAIALTKN VFHG++KHI
Sbjct: 1020 SSCEAEFMAGTEAARQVIWLQDLLCEVTGLPCEKVVVRIDNKSAIALTKNLVFHGRNKHI 1079
Query: 1049 HKRYHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLSKIKLKLK 870
H+RYHFIREC+E ++VE+VPG+ QKADILTKAL RVKF MRSLIGVQDL K + K+K
Sbjct: 1080 HRRYHFIRECVENRHIEVEYVPGDIQKADILTKALGRVKFQVMRSLIGVQDLEKSEFKVK 1139
Query: 869 REIVG 855
E VG
Sbjct: 1140 GENVG 1144
>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1427
Score = 467 bits (1202), Expect = e-129
Identities = 242/410 (59%), Positives = 295/410 (71%), Gaps = 1/410 (0%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
A WE+HHLDVK+AFL+G+L+E+VYV QPEGF RGEE V +LSKALYGL+QAPRAWN
Sbjct: 1013 ADRRWEVHHLDVKSAFLNGDLEEEVYVAQPEGFVKRGEEHLVLRLSKALYGLRQAPRAWN 1072
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
T+LD+ LKEL F +CT+E +VY + + +IV +YVDDL V G I+ FK++M +
Sbjct: 1073 TRLDKCLKELGFARCTQEQAVYTRGKGQAGVIVGVYVDDLIVTGENPHEIAMFKQQMMGE 1132
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEMSDLG L+YYLGIEV QGE GI IKQ AYA++IL + G+ CN T IPM + K
Sbjct: 1133 FEMSDLGLLSYYLGIEVIQGENGIAIKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKD 1192
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
+ ID T YRR +GCLRYLLHTR DL++AVGVASR+M+ P H +K ILRYLKGT
Sbjct: 1193 ADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGT 1252
Query: 1400 MAYGLKFGRG-GSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSS 1224
+ GL F G GS I GF+DS D DD RST G FY SS +SWCSQKQ TVALSS
Sbjct: 1253 LDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSS 1312
Query: 1223 CEAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHK 1044
CEAEFMAAT AA A+WL+ LLSE+ G + ++V + +DNKSAIAL KNPVFHG+SKHI
Sbjct: 1313 CEAEFMAATAAACHALWLRALLSEMMGTEAKRVKLFVDNKSAIALMKNPVFHGRSKHIDT 1372
Query: 1043 RYHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDL 894
RYHFIREC+E + +E V EEQ+AD +TK L K R L+GV+DL
Sbjct: 1373 RYHFIRECVESGQILIEFVRSEEQRADAMTKGLPAAKLATARHLLGVRDL 1422
>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 467 bits (1202), Expect = e-129
Identities = 242/410 (59%), Positives = 295/410 (71%), Gaps = 1/410 (0%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
A WE+HHLDVK+AFL+G+L+E+VYV QPEGF RGEE V +LSKALYGL+QAPRAWN
Sbjct: 1013 ADRRWEVHHLDVKSAFLNGDLEEEVYVAQPEGFVKRGEEHLVLRLSKALYGLRQAPRAWN 1072
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
T+LD+ LKEL F +CT+E +VY + + +IV +YVDDL V G + I+ FK++M +
Sbjct: 1073 TRLDKCLKELGFARCTQEQAVYTRGKGQAGVIVGVYVDDLIVTGENPQEIAMFKQQMMGE 1132
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEMSDLG L+YYLGIEV QGE GI IKQ AYA++IL + G+ CN T IPM + K
Sbjct: 1133 FEMSDLGLLSYYLGIEVIQGENGIAIKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKD 1192
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
+ ID T YRR +GCLRYLLHTR DL++AVGVASR+M+ P H +K ILRYLKGT
Sbjct: 1193 ADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGT 1252
Query: 1400 MAYGLKFGRG-GSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSS 1224
+ GL F G GS I GF+DS D DD RST G FY SS +SWCSQKQ TVALSS
Sbjct: 1253 LDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSS 1312
Query: 1223 CEAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHK 1044
CEAEFMAAT AA A+WL+ LLSE+ G + + V + +DNKSAIAL KNPVFHG+SKHI
Sbjct: 1313 CEAEFMAATAAACHALWLRALLSEMMGTEAKPVKLFVDNKSAIALMKNPVFHGRSKHIDT 1372
Query: 1043 RYHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDL 894
RYHFIREC+E + +E V EEQ+AD +TK L K R L+GV+DL
Sbjct: 1373 RYHFIRECVESGQILIEFVSSEEQRADAMTKGLPAAKLATARHLLGVRDL 1422
>gb|ABW74561.1| reverse transcriptase [Boechera divaricarpa]
Length = 373
Score = 464 bits (1194), Expect = e-128
Identities = 236/411 (57%), Positives = 296/411 (72%)
Frame = -1
Query: 2087 VKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWNTKLDQILKELK 1908
+KT FLHGELKE V+V Q +GF RGEE KVYKLSKALYG +QAPRAWN KLDQILK L
Sbjct: 1 MKTTFLHGELKEFVHVFQLDGFVKRGEEDKVYKLSKALYGWRQAPRAWNNKLDQILKGLN 60
Query: 1907 FKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSKFEMSDLGKLTY 1728
F++C KE SVY K+E+G LIVA+YVDDLF+ G++L +ISEF K+MSSKFEM+DLGKLTY
Sbjct: 61 FRRCPKEQSVYTKQEKGFHLIVAVYVDDLFITGSSLMIISEFMKDMSSKFEMTDLGKLTY 120
Query: 1727 YLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKAQEEPEIDPTCY 1548
YLGI+V QG +GI IKQE YA +IL++ ++TC+ +PM GL++ KA+E+ E+D T Y
Sbjct: 121 YLGIKVTQGVDGICIKQEGYALKILMDTSMETCSRVHVPMDSGLKLLKAEEKTEVDATRY 180
Query: 1547 RRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGTMAYGLKFGRGG 1368
RR +GCLR+LLHT+ DLA+AVG SRYM +P++SH +K +LRY+KGT + GL+F R G
Sbjct: 181 RRTIGCLRHLLHTKLDLAYAVGALSRYMHNPKESHRHAIKHVLRYVKGTTSLGLRFKRDG 240
Query: 1367 SKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSSCEAEFMAATEAA 1188
+ IVG+SDSSHNID DDG+ST GH+FY
Sbjct: 241 DERIVGYSDSSHNIDTDDGKSTGGHVFYL------------------------------- 269
Query: 1187 RQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHKRYHFIRECIEKE 1008
+LL ++ K++KV+I+IDNKS IALTKN VFHG+SKHI RYHFIREC+E E
Sbjct: 270 -------ELLGDVIEDKSKKVVIRIDNKSTIALTKNLVFHGRSKHILSRYHFIRECVENE 322
Query: 1007 IVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLSKIKLKLKREIVG 855
V+VEHVPG E +ADILTK LA VKF EMR IGV+D + LK+ E +G
Sbjct: 323 QVEVEHVPGIEHRADILTKTLACVKFKEMRDKIGVEDFHNLSLKIMGENIG 373
>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1409
Score = 438 bits (1127), Expect = e-120
Identities = 228/410 (55%), Positives = 287/410 (70%), Gaps = 1/410 (0%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
A W++HHLDVK+AFL+GEL+E+VYV QPEGF G+E V KL KALYGL+QAPRAWN
Sbjct: 995 ADRRWQVHHLDVKSAFLNGELEEEVYVAQPEGFARSGKEHLVLKLHKALYGLRQAPRAWN 1054
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
+LD+ L+EL F +CT+E +VY + +IV +YVDDL V G + FK++M +
Sbjct: 1055 IRLDRSLRELGFDRCTQEQAVYTRGRGSDGIIVGVYVDDLIVTGENPSELKVFKEQMMGE 1114
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEMSDLG LTYYLGIEV Q E +KQ AYA+++L + G+ CNS IP+ Q+SK
Sbjct: 1115 FEMSDLGLLTYYLGIEVDQDESATTLKQTAYAKKLLSQFGMMECNSVSIPIDPRSQLSKD 1174
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
E +D T YRR +G LRYLLHTR DL++AVGVASR+M+ P H +KQILRY+KGT
Sbjct: 1175 PEGHPVDATEYRRIIGSLRYLLHTRPDLSYAVGVASRFMERPTVMHFKAVKQILRYIKGT 1234
Query: 1400 MAYGLKFGRG-GSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSS 1224
M YGL + G G+ I G++DS D DD RST G FY S ++W SQKQ TVALSS
Sbjct: 1235 MDYGLVYAAGTGALKITGYTDSDLAGDLDDRRSTGGMAFYINQSLVAWSSQKQKTVALSS 1294
Query: 1223 CEAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHK 1044
CEAEFMAAT AA QA+WL+ LL+E+ G + + V + +DN+SAIAL KNPVFHG+SKHI
Sbjct: 1295 CEAEFMAATTAACQALWLRLLLAEVAGVEEKAVKLFVDNRSAIALMKNPVFHGRSKHIDT 1354
Query: 1043 RYHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDL 894
RYHFIREC++ + VE V EEQ+AD LTK L K R L+GV+ L
Sbjct: 1355 RYHFIRECVDGGQIVVEFVRTEEQRADALTKGLPAAKLVTARHLLGVRSL 1404
>emb|CAH67713.1| H0512B01.8 [Oryza sativa Indica Group]
Length = 1454
Score = 436 bits (1120), Expect = e-119
Identities = 219/412 (53%), Positives = 293/412 (71%), Gaps = 1/412 (0%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
A GW +HH+DVK+AFL+G+L E+VYV QP GF V GEE KV +L KALYGL+QAPRAWN
Sbjct: 1037 AQKGWHVHHMDVKSAFLNGDLAEEVYVKQPPGFVVAGEEDKVLRLRKALYGLRQAPRAWN 1096
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
KLD LKEL F + E+++YR+ G+ L+V +YVDDL + G + + I +FK+EM +K
Sbjct: 1097 AKLDCTLKELGFDQSKHEHAMYRRNNGGSALLVGVYVDDLVITGPSTRAIEQFKEEMKAK 1156
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
F+MSDLG L++YLGIEV QG++GI + Q YA+RI+ AGL CN PM L++S+
Sbjct: 1157 FQMSDLGLLSFYLGIEVKQGDDGISLNQGRYAQRIVESAGLKDCNPCATPMEERLKLSRD 1216
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
P +D T YRR VG LRYL+HTR DLAFAVG SR+M+ P + H +K+ILRY+ GT
Sbjct: 1217 STAPPVDATKYRRLVGSLRYLVHTRPDLAFAVGFVSRFMERPTEEHMVAVKRILRYVAGT 1276
Query: 1400 MAYGLKFGRGGSKS-IVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSS 1224
M YGL + R + ++G+SDS D D RST+G +F+ SS +SW S KQ VALSS
Sbjct: 1277 MEYGLHYKREKEEQRLIGYSDSDLAGDIDTRRSTSGMLFFLDSSLVSWQSIKQRVVALSS 1336
Query: 1223 CEAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHK 1044
CEAE++AAT AA Q IWL LL E+ G + + + +K+D+KSA+AL KNPVFH +SKHI
Sbjct: 1337 CEAEYVAATNAATQGIWLARLLGELLGKQPKAIELKVDSKSALALAKNPVFHERSKHIDL 1396
Query: 1043 RYHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLSK 888
RYHFIR+C+E+ ++ + +Q ADILTKAL RVKF E+R+ IG+ +++
Sbjct: 1397 RYHFIRDCLEEGSINASFITTMDQLADILTKALGRVKFQELRAKIGMVQINQ 1448
>ref|NP_001060934.2| Os08g0133100 [Oryza sativa Japonica Group]
gi|255678127|dbj|BAF22848.2| Os08g0133100 [Oryza sativa
Japonica Group]
Length = 495
Score = 434 bits (1117), Expect = e-119
Identities = 220/411 (53%), Positives = 290/411 (70%), Gaps = 1/411 (0%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
A GW +HH+DVK+AFL+G+L E+VYV QP GF V GEE KV +L KALYGL+QAPRAWN
Sbjct: 83 AQKGWHVHHMDVKSAFLNGDLAEEVYVKQPPGFVVAGEEDKVLRLRKALYGLRQAPRAWN 142
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
KLD LKEL F + E+++YR+ G+ L+V +YVDDL + G + + I +FK+EM +K
Sbjct: 143 AKLDCTLKELGFDQSKHEHAMYRRNNGGSALLVGVYVDDLVITGPSTRAIEQFKEEMKAK 202
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
F+MSDLG L++YLGIEV QG++GI + Q YA+RI+ AGL CN PM L++S+
Sbjct: 203 FQMSDLGLLSFYLGIEVKQGDDGISLNQGRYAQRIVESAGLKDCNPCATPMEERLKLSRD 262
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
P +D T YRR VG LRYL+HTR DLAFAVG SR+M+ P + H +K+ILRY+ GT
Sbjct: 263 STAPPVDATKYRRLVGSLRYLVHTRPDLAFAVGFVSRFMERPTEEHMVAVKRILRYVAGT 322
Query: 1400 MAYGLKFGRGGSKS-IVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSS 1224
M YGL + R + ++G+SDS D D RST+G +F+ GSS +SW S KQ VALSS
Sbjct: 323 MEYGLHYKREKEEQRLIGYSDSDLAGDIDTRRSTSGMLFFLGSSLVSWQSIKQRVVALSS 382
Query: 1223 CEAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHK 1044
CEAE++AAT AA Q IWL LL E+ G + + + +K+D+KSA+AL KNPVFH +SKHI
Sbjct: 383 CEAEYVAATNAATQGIWLARLLGELLGKQPKAIELKVDSKSALALAKNPVFHERSKHIDL 442
Query: 1043 RYHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDLS 891
RYHFIR C+E+ + + +Q ADILTKAL RV+F E+ + IGV +S
Sbjct: 443 RYHFIRSCLEEGSISASFITTMDQLADILTKALGRVRFHELVARIGVVKIS 493
>emb|CCI55340.1| PH01B019A14.9 [Phyllostachys edulis]
Length = 1594
Score = 426 bits (1095), Expect = e-116
Identities = 211/409 (51%), Positives = 285/409 (69%), Gaps = 1/409 (0%)
Frame = -1
Query: 2117 SHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWNT 1938
S GW +HH++VK+AFL+G+LKE+VYV QP GF + G+E KV +L KALYGL+QAPRAWN
Sbjct: 1178 SEGWCVHHMNVKSAFLNGDLKEEVYVRQPPGFIIPGKESKVLRLRKALYGLRQAPRAWNA 1237
Query: 1937 KLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSKF 1758
KLD LK++ F++ E +VYR+ + G L++ +YVDDL + G K I FK EM + F
Sbjct: 1238 KLDSTLKQMGFQQSAHEAAVYRQGKGGNALLIGVYVDDLVITGTKEKEIEAFKAEMKATF 1297
Query: 1757 EMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKAQ 1578
+MSDLG L++YLGIEV Q GI ++Q AYA+RI+ GL CN PM L++S+
Sbjct: 1298 QMSDLGPLSFYLGIEVHQDSSGISLRQTAYAKRIVELGGLTDCNPAHTPMEERLKLSRES 1357
Query: 1577 EEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGTM 1398
E+D T YRR VG LRYL+HTR DLAFAVG SR+MQ P H +K+ILRY+ GT
Sbjct: 1358 TAEEVDATQYRRIVGSLRYLVHTRPDLAFAVGYVSRFMQRPTTEHQQAVKRILRYVAGTS 1417
Query: 1397 AYGLKFGR-GGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSSC 1221
YGL + R G+ +G+SDS H D D +ST+G +++ G PISW S KQ VALSSC
Sbjct: 1418 DYGLHYPRCPGAAHFIGYSDSDHAGDIDTSKSTSGILYFLGKCPISWQSVKQQVVALSSC 1477
Query: 1220 EAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHKR 1041
EAE++AAT A+ QA+WL LL ++ G E V +++D+KSA+AL KNPVFH +SKHI R
Sbjct: 1478 EAEYIAATTASTQALWLARLLGDLLGRDAEAVELRVDSKSALALAKNPVFHERSKHIRVR 1537
Query: 1040 YHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDL 894
YHFIR C+++ V ++ ++Q AD+LTK+L R+KF E+R+ IG+ +
Sbjct: 1538 YHFIRSCLDEGSVRANYINTQDQLADLLTKSLGRIKFQELRARIGMAQI 1586
>emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
Length = 1425
Score = 422 bits (1084), Expect = e-115
Identities = 219/408 (53%), Positives = 283/408 (69%), Gaps = 2/408 (0%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
A GWEIHH+DVK+AFL+GEL+E+VYV QP GF+ + KV KL KALYGL+QAPRAWN
Sbjct: 1012 AQKGWEIHHMDVKSAFLNGELEEEVYVVQPPGFDDKTNASKVLKLRKALYGLRQAPRAWN 1071
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
KLD L LKF K E++VY + + LIV +YVDDL + G+ K I FK +M +
Sbjct: 1072 AKLDNTLLSLKFNKSATESAVYVRGVGDSKLIVGVYVDDLIITGSQKKEIDAFKLQMKQR 1131
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
F MSDLG L+YYLG+EV Q EGI + Q AYA +IL + G++ CN T++PM L++SK
Sbjct: 1132 FNMSDLGFLSYYLGMEVVQKGEGIFLSQSAYAGKILEKTGMEGCNPTQVPMEARLKLSKE 1191
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
+DPT YR VG LRYL++TR DLA++VG SR+M+ P H +K ILRY+ GT
Sbjct: 1192 GTGECVDPTEYRSIVGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHILRYISGT 1251
Query: 1400 MAYGLKFGRG--GSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALS 1227
+ G +GR G+ +VGFSDS D DD +STTG +F +G S ISW SQKQ VALS
Sbjct: 1252 IKTGCWYGREEVGNAKLVGFSDSDMAGDLDDRKSTTGVLFRYGGSLISWQSQKQKVVALS 1311
Query: 1226 SCEAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIH 1047
SCEAE++AAT AA Q IWL L++E+ + + + IDNKSAI L KNPVFH +SKHI
Sbjct: 1312 SCEAEYIAATTAACQGIWLSRLIAELLDAEPGQTTLMIDNKSAINLCKNPVFHDRSKHID 1371
Query: 1046 KRYHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGV 903
RYHFIREC+EK+ + VE+V E+Q AD+LTK + RV+F E+R +G+
Sbjct: 1372 TRYHFIRECVEKKQIAVEYVCSEDQLADLLTKPVGRVRFKELRRKMGL 1419
>ref|NP_001061718.1| Os08g0389500 [Oryza sativa Japonica Group]
gi|113623687|dbj|BAF23632.1| Os08g0389500 [Oryza sativa
Japonica Group]
Length = 1453
Score = 421 bits (1081), Expect = e-115
Identities = 212/410 (51%), Positives = 284/410 (69%), Gaps = 1/410 (0%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
A W +HH+DVK+AFL+G+L E+VYV QP GF G E+KV KL KALYGLKQAPRAWN
Sbjct: 1043 AHRSWSVHHMDVKSAFLNGDLAEEVYVQQPPGFVAAGHERKVLKLHKALYGLKQAPRAWN 1102
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
+KLD L L F + E+ +Y + + L+V IYVDDL + G + +VI+ FK EM +
Sbjct: 1103 SKLDSSLLMLGFARSECEHGLYTRSDGEKRLVVGIYVDDLIITGGSTEVINTFKTEMKTL 1162
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
F MSDLG L+YYLGIEV QG GIE+ Q AYA++IL +AG+ TCN PM L++SK
Sbjct: 1163 FRMSDLGVLSYYLGIEVRQGRRGIELLQAAYAKKILEKAGMGTCNPCATPMEARLKLSKQ 1222
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
P +D T YR +G LRYL++TR D+AFAVG SR+M++PR+ H MK +LRY+ GT
Sbjct: 1223 STSPAVDATEYRSLIGSLRYLMNTRPDMAFAVGYLSRFMENPRQEHLAAMKHLLRYVAGT 1282
Query: 1400 MAYGLKFGRGGSK-SIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSS 1224
+ YGL + G ++ ++VG+SDS D DD +ST+G I++ G +P++W SQKQ VALSS
Sbjct: 1283 IDYGLVYTSGDTEFNLVGYSDSDMAGDIDDRKSTSGIIYFLGGNPVAWQSQKQRVVALSS 1342
Query: 1223 CEAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHK 1044
CEAE++A AA Q +WL+ LL ++ G +K+DN+SAIAL+KNPV H +SKHI
Sbjct: 1343 CEAEYIAGAAAACQGVWLRRLLQDVVGVSGPPPQLKMDNQSAIALSKNPVLHDRSKHIDT 1402
Query: 1043 RYHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGVQDL 894
++HF+REC++ V + V + Q ADI+TKAL R KF E+R LIGV L
Sbjct: 1403 KFHFLRECVDSGAVRLAFVSTQAQLADIMTKALGRSKFQELRELIGVTKL 1452
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 419 bits (1078), Expect = e-114
Identities = 206/406 (50%), Positives = 284/406 (69%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
A + W+IH +DVK+AFL+G+L+E+VY++QP+G+ V+GEE KV +L KALYGLKQAPRAWN
Sbjct: 936 AQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWN 995
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
T++D+ KE F KC E+++Y K ++ +LI +YVDDL GN + EFKKEM+ +
Sbjct: 996 TRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKE 1055
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEM+D+G ++YYLGIEV Q + GI I QE YA+ +L + +D N PM G+++SK
Sbjct: 1056 FEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKK 1115
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
+E +DPT ++ VG LRYL TR D+ +AVGV SRYM+ P +H K+ILRY+KGT
Sbjct: 1116 EEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGT 1175
Query: 1400 MAYGLKFGRGGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSSC 1221
+ +GL + +VG+SDS D DD +ST+G +FY G + +W S+KQ V LS+C
Sbjct: 1176 VNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTC 1235
Query: 1220 EAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHKR 1041
EAE++AAT AIWL++LL E++ + E I +DNKSAIAL KNPVFH +SKHI R
Sbjct: 1236 EAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTR 1295
Query: 1040 YHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGV 903
YH+IREC+ K+ V +E+V +Q ADI TK L R F +MRSL+GV
Sbjct: 1296 YHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1341
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 419 bits (1078), Expect = e-114
Identities = 206/406 (50%), Positives = 284/406 (69%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
A + W+IH +DVK+AFL+G+L+E+VY++QP+G+ V+GEE KV +L KALYGLKQAPRAWN
Sbjct: 904 AQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWN 963
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
T++D+ KE F KC E+++Y K ++ +LI +YVDDL GN + EFKKEM+ +
Sbjct: 964 TRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKE 1023
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEM+D+G ++YYLGIEV Q + GI I QE YA+ +L + +D N PM G+++SK
Sbjct: 1024 FEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKK 1083
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
+E +DPT ++ VG LRYL TR D+ +AVGV SRYM+ P +H K+ILRY+KGT
Sbjct: 1084 EEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGT 1143
Query: 1400 MAYGLKFGRGGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSSC 1221
+ +GL + +VG+SDS D DD +ST+G +FY G + +W S+KQ V LS+C
Sbjct: 1144 VNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTC 1203
Query: 1220 EAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHKR 1041
EAE++AAT AIWL++LL E++ + E I +DNKSAIAL KNPVFH +SKHI R
Sbjct: 1204 EAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTR 1263
Query: 1040 YHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGV 903
YH+IREC+ K+ V +E+V +Q ADI TK L R F +MRSL+GV
Sbjct: 1264 YHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1309
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 417 bits (1073), Expect = e-114
Identities = 204/406 (50%), Positives = 282/406 (69%)
Frame = -1
Query: 2120 ASHGWEIHHLDVKTAFLHGELKEDVYVDQPEGFEVRGEEQKVYKLSKALYGLKQAPRAWN 1941
A + W+IH +DVK+AFL+G+L+E+VY++QP+G+ V+GEE KV +L K LYGLKQAPRAWN
Sbjct: 936 AQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWN 995
Query: 1940 TKLDQILKELKFKKCTKENSVYRKEEEGTLLIVAIYVDDLFVMGNTLKVISEFKKEMSSK 1761
T++D+ KE F KC E+++Y K ++ +LI +YVDDL GN + EFKKEM+ +
Sbjct: 996 TRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKE 1055
Query: 1760 FEMSDLGKLTYYLGIEVCQGEEGIEIKQEAYARRILIEAGLDTCNSTKIPMMFGLQVSKA 1581
FEM+D+G ++YYLGIEV Q + GI I QE YA+ +L + +D N PM G+++SK
Sbjct: 1056 FEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKK 1115
Query: 1580 QEEPEIDPTCYRRNVGCLRYLLHTRSDLAFAVGVASRYMQSPRKSHGDIMKQILRYLKGT 1401
+E +DPT ++ VG LRYL TR D+ +AVGV SRYM+ P +H K+ILRY+KGT
Sbjct: 1116 EEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGT 1175
Query: 1400 MAYGLKFGRGGSKSIVGFSDSSHNIDQDDGRSTTGHIFYFGSSPISWCSQKQSTVALSSC 1221
+ +GL + +VG+SDS D DD +ST+G +FY G + +W S+KQ V LS+C
Sbjct: 1176 VNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTC 1235
Query: 1220 EAEFMAATEAARQAIWLQDLLSEITGWKTEKVLIKIDNKSAIALTKNPVFHGKSKHIHKR 1041
EAE++AAT AIWL++LL E++ + E I +DNKSAIAL KNPVFH +SKHI R
Sbjct: 1236 EAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTR 1295
Query: 1040 YHFIRECIEKEIVDVEHVPGEEQKADILTKALARVKFGEMRSLIGV 903
YH+IREC+ K+ V +E+V +Q AD TK L R F +MRSL+GV
Sbjct: 1296 YHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGV 1341