BLASTX nr result
ID: Paeonia24_contig00004881
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00004881
(1734 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 1109 0.0
gb|AAZ08459.1| RNA polymerase II second largest subunit [Astilbe... 1104 0.0
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 1102 0.0
ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prun... 1102 0.0
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 1101 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 1100 0.0
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su... 1100 0.0
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 1099 0.0
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i... 1099 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 1098 0.0
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus... 1098 0.0
ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phas... 1098 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 1096 0.0
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas... 1095 0.0
gb|AAY89340.1| RNA polymerase II second largest subunit [Berberi... 1094 0.0
gb|AAY85206.1| RNA polymerase II second largest subunit [Embothr... 1094 0.0
gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotia... 1093 0.0
gb|AAY85208.1| RNA polymerase II second largest subunit [Euptele... 1093 0.0
gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschsch... 1093 0.0
gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentr... 1093 0.0
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 1109 bits (2868), Expect = 0.0
Identities = 548/578 (94%), Positives = 561/578 (97%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 191 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS 250
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLE
Sbjct: 251 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLE 310
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 311 EAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFG 370
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 371 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 430
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 431 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 490
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDPDMLV+T VDVNTEVGVVRDIR
Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIR 610
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIVEKQRLLIK+KDIQALQQRETP++GGWHDLVAKGFIEY+D
Sbjct: 611 LKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDT 670
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 671 EEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDT+AYVLYYPQKPLVTT
Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLVTT 768
>gb|AAZ08459.1| RNA polymerase II second largest subunit [Astilbe sp. Yoshikawa s.n.]
Length = 951
Score = 1104 bits (2855), Expect = 0.0
Identities = 549/578 (94%), Positives = 558/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRML+RTS
Sbjct: 87 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLARTS 146
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR +IPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 147 AKGGSSGQYIRATLPYIRVDIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 206
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVG+ EYCETKKAYYFG
Sbjct: 207 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGMAEYCETKKAYYFG 266
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLL ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 267 YIIHRLLLVALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 326
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 327 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 386
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 387 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 446
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIP++TKIFVNGCWVGIHRDPDMLVKT VDVNTEVGVVRDIR
Sbjct: 447 WGTENFEEISPAVIPEATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIR 506
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETP++GGWHDLVAKGFIEYVD
Sbjct: 507 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPEDGGWHDLVAKGFIEYVDT 566
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLVSARLNPEEAYSE YTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 567 EEEETTMISMTINDLVSARLNPEEAYSEYYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 626
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 627 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 664
>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 1102 bits (2851), Expect = 0.0
Identities = 545/578 (94%), Positives = 558/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 192 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS 251
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
+KGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 252 SKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 311
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVG GE+CETKKAYYFG
Sbjct: 312 EAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFCETKKAYYFG 371
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 372 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 431
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 432 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 491
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 492 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 551
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDPDMLVKT VDVNTEVGVVRDIR
Sbjct: 552 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIR 611
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI+ALQQRETP+E GWHDLV+ GFIEY+D
Sbjct: 612 LKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNGFIEYIDT 671
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLV ARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 672 EEEETTMISMTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 731
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 732 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 769
>ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
gi|462410424|gb|EMJ15758.1| hypothetical protein
PRUPE_ppa000425mg [Prunus persica]
Length = 1192
Score = 1102 bits (2849), Expect = 0.0
Identities = 544/578 (94%), Positives = 559/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRML+RTS
Sbjct: 191 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLARTS 250
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
+KGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 251 SKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 310
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGV+REKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFG
Sbjct: 311 EAFVIQNQQVALDYIGKRGATVGVSREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFG 370
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 371 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 430
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
KE+NLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 431 KELNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 490
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDP+MLVKT VDVNTEVGVVRDIR
Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRKLRRRVDVNTEVGVVRDIR 610
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRE P++GGWHDLVAKGFIEY+D
Sbjct: 611 LKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAKGFIEYIDT 670
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 671 EEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 768
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
tuberosum]
Length = 1191
Score = 1101 bits (2847), Expect = 0.0
Identities = 545/578 (94%), Positives = 557/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFV EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 191 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTS 250
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLE
Sbjct: 251 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLE 310
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 311 EAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFG 370
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 371 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 430
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 431 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 490
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNG WVGIHRDPDMLV+T VDVNTEVGVVRDIR
Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIR 610
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRE+PDEGGWHDLVAKG+IEY+D
Sbjct: 611 LKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDT 670
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLV ARLNP +AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 671 EEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 768
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 1100 bits (2846), Expect = 0.0
Identities = 545/578 (94%), Positives = 557/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 194 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS 253
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 254 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 313
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 314 EAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFG 373
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNG
Sbjct: 374 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNG 433
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 434 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 493
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 494 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 553
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDPDMLVKT VDVNTEVGVVRDIR
Sbjct: 554 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIR 613
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRE+ +EGGWHDLVAKGFIEY+D
Sbjct: 614 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDT 673
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTI+DLV AR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 674 EEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 733
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 734 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 771
>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus]
Length = 1199
Score = 1100 bits (2845), Expect = 0.0
Identities = 544/578 (94%), Positives = 558/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFV EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 199 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTS 258
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 259 AKGGSSGQYIRATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 318
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFG
Sbjct: 319 EAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFG 378
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 379 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 438
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 439 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 498
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 499 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 558
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDP+MLVKT VDVNTEVGVVRDIR
Sbjct: 559 WGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIR 618
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRE+P++GGWHDLVAKGFIEY+D
Sbjct: 619 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDT 678
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTI+DL+ AR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 679 EEEETTMISMTISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 738
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 739 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 776
>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
arietinum]
Length = 1194
Score = 1099 bits (2843), Expect = 0.0
Identities = 541/578 (93%), Positives = 559/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 194 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS 253
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 254 SKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 313
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA++ILQ+EMLPHVGVGEYCETKKAYYFG
Sbjct: 314 EAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGVGEYCETKKAYYFG 373
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 374 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 433
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 434 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 493
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 494 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 553
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNGCW+GIHRDPDMLV+T VDVNTEVGVVRDIR
Sbjct: 554 WGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIR 613
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI +LQQRE+P+EGGWHDLV+KGFIEY+D
Sbjct: 614 LKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKGFIEYIDT 673
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 674 EEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 733
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 734 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 771
>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
polymerase family protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 1099 bits (2842), Expect = 0.0
Identities = 543/578 (93%), Positives = 557/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 191 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS 250
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 251 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 310
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVG++CETKKAYYFG
Sbjct: 311 EAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFG 370
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNG
Sbjct: 371 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNG 430
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 431 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 490
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNGCWVG+HR+PDMLV T VDVNTEVGVVRDIR
Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIR 610
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRE+P++GGWHDLVAKGFIEY+D
Sbjct: 611 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDT 670
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLV AR+NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 671 EEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 768
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 1098 bits (2841), Expect = 0.0
Identities = 543/578 (93%), Positives = 557/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFV EVRSMA++QNRPPS MFVRMLSRTS
Sbjct: 191 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFVRMLSRTS 250
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLE
Sbjct: 251 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLE 310
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 311 EAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFG 370
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 371 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 430
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 431 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 490
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 491 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 550
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNG WVGIHRDPDMLV+T VDVNTEVGVVRDIR
Sbjct: 551 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIR 610
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRE+PDEGGWHDLVAKG+IEY+D
Sbjct: 611 LKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDT 670
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLV ARLNP +AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 671 EEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 730
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 731 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 768
>gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus guttatus]
Length = 1197
Score = 1098 bits (2840), Expect = 0.0
Identities = 541/578 (93%), Positives = 559/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAE+QNRPPS MF+RML+RTS
Sbjct: 196 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFIRMLARTS 255
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR+EIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLE
Sbjct: 256 AKGGSSGQYIRATLPYIRSEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLE 315
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVTR++RIKYA+EILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 316 EAFVIQNQQVALDYIGKRGATVGVTRDRRIKYAKEILQKEMLPHVGVGEYCETKKAYYFG 375
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 376 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 435
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 436 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 495
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 496 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 555
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRDIR
Sbjct: 556 WGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRDIR 615
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRE+PD+GGWHDLVAKGFIEY+D
Sbjct: 616 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGFIEYIDT 675
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLVSAR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 676 EEEETTMISMTINDLVSARINPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 735
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 736 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 773
>ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
gi|561011794|gb|ESW10701.1| hypothetical protein
PHAVU_009G230400g [Phaseolus vulgaris]
Length = 1196
Score = 1098 bits (2839), Expect = 0.0
Identities = 539/578 (93%), Positives = 558/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 192 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS 251
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMM+LLRPSLE
Sbjct: 252 SKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMDLLRPSLE 311
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYA+EILQKEMLPHVG+GEYCETKKAYYFG
Sbjct: 312 EAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFG 371
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNG
Sbjct: 372 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNG 431
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKT+TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 432 KDVNLQFAIKAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 491
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 492 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 551
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNGCW+GIHRDPDMLV+T VDVNTEVGVVRDIR
Sbjct: 552 WGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIR 611
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIV++QRLLIKKKDI ALQQRE+P+EGGWHDLV+KGFIEY+D
Sbjct: 612 LKELRIYTDYGRCSRPLFIVDRQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDT 671
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLV AR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 672 EEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 731
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 732 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 769
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1192
Score = 1096 bits (2835), Expect = 0.0
Identities = 540/578 (93%), Positives = 558/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 194 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS 253
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFS TQMMELLRPSLE
Sbjct: 254 SKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSYTQMMELLRPSLE 313
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 314 EAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFG 373
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 374 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 433
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 434 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 493
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 494 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 553
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNGCW+GIHRDPDMLV+T VDVNTEVGVVRDIR
Sbjct: 554 WGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIR 613
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRE+P++GGWHDLV+KGFIEY+D
Sbjct: 614 LKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDT 673
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLV AR+NPE+AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 674 EEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 733
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 734 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 771
>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
gi|561021391|gb|ESW20162.1| hypothetical protein
PHAVU_006G185800g [Phaseolus vulgaris]
Length = 1194
Score = 1095 bits (2832), Expect = 0.0
Identities = 540/578 (93%), Positives = 558/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 194 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS 253
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 254 SKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 313
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 314 EAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFG 373
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 374 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 433
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNS
Sbjct: 434 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNS 493
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 494 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 553
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNG W+GIHRDPDMLV+T VDVNTEVGVVRDIR
Sbjct: 554 WGTENFEEISPAVIPQATKIFVNGSWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIR 613
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIV+KQRLLIKK+DI ALQQRE+P+EGGWHDLV+KGFIEY+D
Sbjct: 614 LKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGFIEYIDT 673
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLV ARLNPE+AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 674 EEEETTMISMTINDLVQARLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 733
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 734 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 771
>gb|AAY89340.1| RNA polymerase II second largest subunit [Berberidopsis beckleri]
Length = 873
Score = 1094 bits (2830), Expect = 0.0
Identities = 542/578 (93%), Positives = 555/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+VGEVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 87 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVRMLSRTS 146
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 147 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 206
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 207 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFG 266
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNG
Sbjct: 267 YIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNG 326
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 327 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 386
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEE
Sbjct: 387 PIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEE 446
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
W TENFEEISPAVIPQ+TKIFVNGCWVGIHR+PD+LVKT VDVNTEVGV+RDIR
Sbjct: 447 WSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIR 506
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELR+YTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRE+ ++GGWHDLVAKGFIEYVD
Sbjct: 507 LKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESHEDGGWHDLVAKGFIEYVDT 566
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDL+SA+LNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 567 EEEETTMISMTINDLISAKLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 626
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTT
Sbjct: 627 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTT 664
>gb|AAY85206.1| RNA polymerase II second largest subunit [Embothrium coccineum]
Length = 706
Score = 1094 bits (2829), Expect = 0.0
Identities = 539/578 (93%), Positives = 557/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPN+YA+VGEVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 87 IINGSEKVLIAQEKMSTNHVYVFKKRQPNRYAYVGEVRSMAESQNRPPSSMFVRMLSRTS 146
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMM LLRPSLE
Sbjct: 147 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMGLLRPSLE 206
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 207 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFG 266
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 267 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 326
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 327 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 386
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEE
Sbjct: 387 PIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEE 446
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
W TENFEEISPAVIPQ+TKIFVNGCWVGIHR+P++LVKT VDVNTEVGV+RDIR
Sbjct: 447 WSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIR 506
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELR+YTDYGRCSRPLFIV+KQRLLIKKKD++ALQQRE+PD+GGWHDLVAKGFIEY+D
Sbjct: 507 LKELRLYTDYGRCSRPLFIVDKQRLLIKKKDVRALQQRESPDDGGWHDLVAKGFIEYIDT 566
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDL+SARL+PEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 567 EEEETTMISMTINDLISARLHPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 626
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTT
Sbjct: 627 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTT 664
>gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotiana sylvestris]
Length = 1087
Score = 1093 bits (2828), Expect = 0.0
Identities = 542/578 (93%), Positives = 554/578 (95%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFV EVRSMAESQNRPPS MFVRMLSRTS
Sbjct: 94 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTS 153
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLE
Sbjct: 154 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLE 213
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVG+GEYCETKKAYYFG
Sbjct: 214 EAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFG 273
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGG FRMLFRKLTRDVR YVQK VDNG
Sbjct: 274 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGXFRMLFRKLTRDVRAYVQKXVDNG 333
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 334 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 393
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE
Sbjct: 394 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 453
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
WGTENFEEISPAVIPQ+TKIFVNG WVGIHRDPDMLV+T VDVNTEVGVVRDIR
Sbjct: 454 WGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIR 513
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRE+P+EGGWHDLVAKG+IEY+D
Sbjct: 514 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGYIEYIDT 573
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDL ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 574 EEEETTMISMTINDLXQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 633
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT
Sbjct: 634 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 671
>gb|AAY85208.1| RNA polymerase II second largest subunit [Euptelea polyandra]
Length = 874
Score = 1093 bits (2828), Expect = 0.0
Identities = 540/578 (93%), Positives = 555/578 (96%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+VGEVRSMAESQNRPPS MFVRMLSR S
Sbjct: 87 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVRMLSRAS 146
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 147 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 206
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 207 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFG 266
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNG
Sbjct: 267 YIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNG 326
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 327 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 386
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEE
Sbjct: 387 PIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEE 446
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
W TENFEEISPAVIPQ+TKIFVNGCWVGIHR+P++LVKT VDVNTEVGV+RDIR
Sbjct: 447 WSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIR 506
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELR+YTDYGRCSRPLFIVEKQRLLIKKKDI+ALQQRE+PD+GGWHDLVAKGFIEYVD
Sbjct: 507 LKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPDDGGWHDLVAKGFIEYVDT 566
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDL++AR+NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 567 EEEETTMISMTINDLITARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 626
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTT
Sbjct: 627 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTT 664
>gb|AAZ08460.1| RNA polymerase II second largest subunit [Eschscholzia californica]
Length = 951
Score = 1093 bits (2826), Expect = 0.0
Identities = 541/578 (93%), Positives = 554/578 (95%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRMLSR S
Sbjct: 87 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRAS 146
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLE
Sbjct: 147 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLE 206
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG
Sbjct: 207 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 266
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 267 YIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 326
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 327 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 386
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEE
Sbjct: 387 PIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEE 446
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
W TENFEEISPAVIPQSTKIFVNGCWVGIHR+P++LVKT VDVNTEVGV+RDI
Sbjct: 447 WSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIH 506
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELR+YTDYGRCSRPLFIVEKQRLLIKKKDIQALQ RE+P+EGGWHDLVAKGFIEYVD
Sbjct: 507 LKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQLRESPEEGGWHDLVAKGFIEYVDT 566
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLVSAR+NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 567 EEEETTMISMTINDLVSARVNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 626
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTT
Sbjct: 627 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTT 664
>gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentra formosa]
Length = 873
Score = 1093 bits (2826), Expect = 0.0
Identities = 541/578 (93%), Positives = 554/578 (95%)
Frame = +1
Query: 1 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVRMLSRTS 180
IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVRMLSR S
Sbjct: 87 IINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRAS 146
Query: 181 AKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 360
AKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE
Sbjct: 147 AKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLE 206
Query: 361 EAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFG 540
EAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYAREILQKEMLPHVG+GEYCETKKAYYFG
Sbjct: 207 EAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGIGEYCETKKAYYFG 266
Query: 541 YIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 720
YIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG
Sbjct: 267 YIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNG 326
Query: 721 KEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 900
K+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS
Sbjct: 327 KDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNS 386
Query: 901 PIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE 1080
PIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEE
Sbjct: 387 PIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEE 446
Query: 1081 WGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIR 1260
W TENFEEISPAVIPQSTKIFVNGCWVGIHR+P++LVKT VDVNTEVGV+RDIR
Sbjct: 447 WSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPELLVKTLRALRRQVDVNTEVGVIRDIR 506
Query: 1261 LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDX 1440
LKELR+YTDYGRCSRPLFIVEKQRLLIKK+DI+ALQ RE+PDEGGWHDLVAKG+IEYVD
Sbjct: 507 LKELRLYTDYGRCSRPLFIVEKQRLLIKKRDIRALQLRESPDEGGWHDLVAKGYIEYVDT 566
Query: 1441 XXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 1620
MISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 567 EEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 626
Query: 1621 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTT 1734
YQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTT
Sbjct: 627 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTT 664