BLASTX nr result

ID: Paeonia24_contig00001757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00001757
         (513 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567525.1| RING/U-box domain-containing protein [Arabidops...    58   2e-06
ref|XP_006279501.1| hypothetical protein CARUB_v10027259mg [Caps...    56   5e-06
ref|NP_199572.1| RING-H2 finger protein ATL79 [Arabidopsis thali...    56   6e-06
ref|XP_002863330.1| zinc finger family protein [Arabidopsis lyra...    56   6e-06
ref|XP_006282933.1| hypothetical protein CARUB_v10007395mg [Caps...    55   8e-06
ref|XP_006414254.1| hypothetical protein EUTSA_v10026467mg [Eutr...    52   9e-06

>ref|NP_567525.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|17981651|gb|AAL51109.1|AF458337_1 AT4g17240/dl4655c
           [Arabidopsis thaliana] gi|15809954|gb|AAL06904.1|
           AT4g17240/dl4655c [Arabidopsis thaliana]
           gi|332658468|gb|AEE83868.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 166

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
 Frame = -3

Query: 259 LQSIPAPAP--------VPVTVEFGAETNLQWVEVECSICLDAFEDGQQISILRRCEHGF 104
           LQ +P P P         P T+ +    NL   E EC ICL  F+DG  + +L RC+HGF
Sbjct: 66  LQHVPKPDPDLEATHPDAPPTLVYSPGLNLAGNEAECIICLSEFQDGDTLRVLERCKHGF 125

Query: 103 HA*CVED*LS 74
           H  C++  LS
Sbjct: 126 HVYCIQKWLS 135


>ref|XP_006279501.1| hypothetical protein CARUB_v10027259mg [Capsella rubella]
           gi|482548205|gb|EOA12399.1| hypothetical protein
           CARUB_v10027259mg [Capsella rubella]
          Length = 166

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/55 (43%), Positives = 34/55 (61%)
 Frame = -3

Query: 238 APVPVTVEFGAETNLQWVEVECSICLDAFEDGQQISILRRCEHGFHA*CVED*LS 74
           AP P T+ + ++  L   E EC+ICL  FE G+ I +L +C+HGFH  C+   LS
Sbjct: 87  APTP-TLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLS 140


>ref|NP_199572.1| RING-H2 finger protein ATL79 [Arabidopsis thaliana]
           gi|68565286|sp|Q9FGJ6.1|ATL79_ARATH RecName:
           Full=RING-H2 finger protein ATL79; Flags: Precursor
           gi|9758789|dbj|BAB09087.1| unnamed protein product
           [Arabidopsis thaliana] gi|21553634|gb|AAM62727.1|
           unknown [Arabidopsis thaliana]
           gi|51969080|dbj|BAD43232.1| unknown protein [Arabidopsis
           thaliana] gi|51971483|dbj|BAD44406.1| unknown protein
           [Arabidopsis thaliana] gi|98960905|gb|ABF58936.1|
           At5g47610 [Arabidopsis thaliana]
           gi|332008154|gb|AED95537.1| RING-H2 finger protein ATL79
           [Arabidopsis thaliana]
          Length = 166

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/61 (36%), Positives = 35/61 (57%)
 Frame = -3

Query: 256 QSIPAPAPVPVTVEFGAETNLQWVEVECSICLDAFEDGQQISILRRCEHGFHA*CVED*L 77
           ++  +  P   T+ + ++  L   E EC+ICL  FE G+ I +L +C+HGFH  C+   L
Sbjct: 80  EAAASSTPTTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWL 139

Query: 76  S 74
           S
Sbjct: 140 S 140


>ref|XP_002863330.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309165|gb|EFH39589.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 166

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = -3

Query: 247 PAPAPVPVTVEFGAETNLQWVEVECSICLDAFEDGQQISILRRCEHGFHA*CVED*LS 74
           P+ A  P T+ + ++  L   E EC+ICL  FE G+ I +L +C+HGFH  C+   LS
Sbjct: 84  PSTATTP-TLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLS 140


>ref|XP_006282933.1| hypothetical protein CARUB_v10007395mg [Capsella rubella]
           gi|482551638|gb|EOA15831.1| hypothetical protein
           CARUB_v10007395mg [Capsella rubella]
          Length = 170

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/53 (43%), Positives = 32/53 (60%)
 Frame = -3

Query: 232 VPVTVEFGAETNLQWVEVECSICLDAFEDGQQISILRRCEHGFHA*CVED*LS 74
           +P T+ +    NL   E EC ICL  F+DG  + +L RC+HGFH  C++  LS
Sbjct: 85  LPPTLVYSPGMNLAGTEAECIICLSEFQDGDTLRVLERCKHGFHVHCIQKWLS 137


>ref|XP_006414254.1| hypothetical protein EUTSA_v10026467mg [Eutrema salsugineum]
           gi|557115424|gb|ESQ55707.1| hypothetical protein
           EUTSA_v10026467mg [Eutrema salsugineum]
          Length = 154

 Score = 52.4 bits (124), Expect(2) = 9e-06
 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
 Frame = -3

Query: 259 LQSIPAPAPVPV--------TVEFGAETNLQWVEVECSICLDAFEDGQQISILRRCEHGF 104
           LQ+   P P P         T+ +    NL   E EC ICL  FEDG  + +L RC+HGF
Sbjct: 65  LQNDSKPDPEPEASHSEAFPTLVYSPGLNLAGAEAECIICLSEFEDGDTLRVLDRCKHGF 124

Query: 103 HA*CVE 86
           H  C++
Sbjct: 125 HIHCIQ 130



 Score = 22.7 bits (47), Expect(2) = 9e-06
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 407 PAPSPSVSCKAPTCIVFPYSKLKVIEVNVS 318
           P P  + +CK+ +C   PYS       N S
Sbjct: 8   PQPQLTSTCKSQSCSWKPYSHSNDFAANAS 37


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