BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00001015
         (1527 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...   666   0.0  
ref|XP_007013390.1| RNA polymerase II transcription mediators is...   638   e-180
gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]     625   e-176
ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prun...   624   e-176
ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II tra...   613   e-173
ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II tra...   612   e-172
ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citr...   611   e-172
ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II tra...   600   e-169
ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II tra...   596   e-168
ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra...   593   e-167
ref|XP_007013395.1| RNA polymerase II transcription mediators is...   592   e-166
ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Popu...   590   e-166
ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutr...   579   e-162
ref|XP_007154971.1| hypothetical protein PHAVU_003G161800g [Phas...   566   e-159
ref|XP_003549778.1| PREDICTED: mediator of RNA polymerase II tra...   566   e-159
ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II tra...   566   e-159
ref|XP_006286416.1| hypothetical protein CARUB_v10002972mg [Caps...   554   e-155
ref|NP_197517.3| RNA polymerase II transcription mediator [Arabi...   554   e-155
ref|XP_007013393.1| RNA polymerase II transcription mediators is...   553   e-155
ref|XP_002873986.1| hypothetical protein ARALYDRAFT_351112 [Arab...   552   e-154

>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
            gi|147821405|emb|CAN63500.1| hypothetical protein
            VITISV_011675 [Vitis vinifera]
            gi|297738929|emb|CBI28174.3| unnamed protein product
            [Vitis vinifera]
          Length = 660

 Score =  666 bits (1719), Expect = 0.0
 Identities = 359/544 (65%), Positives = 408/544 (75%), Gaps = 36/544 (6%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLPWQSLME 1347
            IEENGAERFP+DVGYD+KR+SLIRRIDFAWAV                     PWQSL+E
Sbjct: 20   IEENGAERFPTDVGYDDKRVSLIRRIDFAWAVEKDTKKQKKASKEEATPW---PWQSLVE 76

Query: 1346 NLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSAA 1167
            NL+LAHQELSVIIDLI+T           VEAND VTVA MT+PKPLPNE LSDL VSAA
Sbjct: 77   NLRLAHQELSVIIDLIST-----------VEANDAVTVASMTRPKPLPNEVLSDLGVSAA 125

Query: 1166 TKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTI 987
            TKLQCFRHL KYFKQSAKALEQ+I REARFYG+LIRLQQNWKVKRQR+AASAPGNEGF+I
Sbjct: 126  TKLQCFRHLSKYFKQSAKALEQQIAREARFYGALIRLQQNWKVKRQRVAASAPGNEGFSI 185

Query: 986  DLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAH-------- 834
            DL+ NSL+DP  V RP S+S VRVDHDSAGMLAV LPPNSCR+LHFGF G H        
Sbjct: 186  DLFSNSLHDPVAVFRPSSLSTVRVDHDSAGMLAVHLPPNSCRALHFGFLGGHLGNIPKEP 245

Query: 833  ----SQFSVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSI 666
                +    E  SKE KK  P  D+ECVKETH +LRE HQAIF EQVFDLVNREAF+ S 
Sbjct: 246  SKTKTYGPDELPSKEIKK--PLSDNECVKETHSVLREGHQAIFDEQVFDLVNREAFNSSS 303

Query: 665  GVNVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSD--DEVKLV 492
            GVNVTGIRENYLQL+IGQ ASVF+ L+ SG+D +       Q LE+A+LP D  D VKL 
Sbjct: 304  GVNVTGIRENYLQLNIGQGASVFMSLVPSGQDEKTADGMGMQNLESAILPMDTFDGVKLS 363

Query: 491  ------EVKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSGRGQSTKE---EKFGLLG 339
                  + KKS FPNRIS EIYL+Q+FHEH FVR KDK I +GR Q + +   + FGLLG
Sbjct: 364  DGKHDNDKKKSGFPNRISSEIYLKQLFHEHVFVRAKDKHISAGRTQPSSQPAKDGFGLLG 423

Query: 338  HFCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILH---- 171
            HFCMSL+HRIFS+KV+ ELE+LV RVPYLHL++HPTWHSRTSSWTL MKVP+S  H    
Sbjct: 424  HFCMSLAHRIFSSKVLMELENLVSRVPYLHLLSHPTWHSRTSSWTLLMKVPESSFHPGCQ 483

Query: 170  --------MKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLA 15
                    +KN IK+ FRTKVV+ DD I+VEG+G PNVVGLFK  SED+CSMN+Y+CDLA
Sbjct: 484  TRTSDIHNVKNIIKTHFRTKVVINDDCINVEGDGAPNVVGLFKGSSEDVCSMNRYDCDLA 543

Query: 14   DLPV 3
            D+PV
Sbjct: 544  DIPV 547


>ref|XP_007013390.1| RNA polymerase II transcription mediators isoform 1 [Theobroma cacao]
            gi|590578008|ref|XP_007013391.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
            gi|508783753|gb|EOY31009.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
            gi|508783754|gb|EOY31010.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
          Length = 663

 Score =  638 bits (1646), Expect = e-180
 Identities = 350/546 (64%), Positives = 409/546 (74%), Gaps = 38/546 (6%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLP-WQSLM 1350
            IEENG ER+P ++ YDEKR+SLIRRIDFAWA+                   +   W  L+
Sbjct: 20   IEENGVERYPHELSYDEKRVSLIRRIDFAWALETDEERERKKKQKKKNSKDATATW--LV 77

Query: 1349 ENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSA 1170
            ENLQLAHQELSVIIDLINT           VEAND VTVAGMT+PKPLPNE LSDLAVSA
Sbjct: 78   ENLQLAHQELSVIIDLINT-----------VEANDAVTVAGMTRPKPLPNEVLSDLAVSA 126

Query: 1169 ATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFT 990
            ATKLQC+RHLGKYFKQSAKALEQ+I REARFYG+LIRLQQNWKVKRQR+AA +  NEGFT
Sbjct: 127  ATKLQCYRHLGKYFKQSAKALEQQIAREARFYGALIRLQQNWKVKRQRVAAPSSSNEGFT 186

Query: 989  IDLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHS------ 831
            IDL+DNSLYD A + RP S+S++ ++HDSAGMLA+ LP NSC SLHFGF G HS      
Sbjct: 187  IDLFDNSLYDSATISRPSSLSVIHIEHDSAGMLAINLPSNSCHSLHFGFLGVHSADIPKE 246

Query: 830  ------QFSVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPS 669
                    SV+ ++++++K+S S DDE VKETHL+LREVHQ+IF +QVFD+VNREAF+ S
Sbjct: 247  SSKIKTHGSVDQTTRDSQKESMS-DDESVKETHLLLREVHQSIFNDQVFDMVNREAFNQS 305

Query: 668  IGVNVTGIRENYLQLSIGQEASVFILLMASGK-DGENDGKADTQKLETAV--LPSDDEVK 498
             GVNVTGIRENYLQLSIGQ  S+FI L+ S K D +    A+ Q LE+A+  L S D+VK
Sbjct: 306  AGVNVTGIRENYLQLSIGQGTSLFISLVPSSKGDDQAVDTANAQNLESAIVSLDSFDDVK 365

Query: 497  L------VEVKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSG---RGQSTKEEKFGL 345
                   +  KK  FPNRIS EIYLQQI HEHAF++GKD+   SG    GQS K    GL
Sbjct: 366  SGEGKHDITEKKWGFPNRISCEIYLQQIVHEHAFIKGKDRPNSSGTRVSGQSGKVGS-GL 424

Query: 344  LGHFCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILH-- 171
            LGHF +SL+HRIFSN+V+ +LE++VCRVPYLHL+THPTWHSRTSSWT+ MKVPQSILH  
Sbjct: 425  LGHFSLSLAHRIFSNRVLMKLENVVCRVPYLHLMTHPTWHSRTSSWTIFMKVPQSILHVE 484

Query: 170  ----------MKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECD 21
                      MK+AIKSQFRTKVVV DD I+VEGEG PNVVGLFK  SED+CS+NKY+CD
Sbjct: 485  SQSQKSDFQNMKDAIKSQFRTKVVVNDDRINVEGEGAPNVVGLFKRSSEDICSVNKYDCD 544

Query: 20   LADLPV 3
            LADLPV
Sbjct: 545  LADLPV 550


>gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]
          Length = 701

 Score =  625 bits (1612), Expect = e-176
 Identities = 342/541 (63%), Positives = 400/541 (73%), Gaps = 33/541 (6%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLPWQSLME 1347
            IEENGAERFPSDVGYDEKRLSLIRRIDFAWAV                     PWQ+++E
Sbjct: 20   IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVEKDEKKKQKKSAKESLTPW--PWQTMVE 77

Query: 1346 NLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSAA 1167
            NLQLA QELSVI+DLINT           VEAND VTVAGMT+PKPLPNE LSDLAVSAA
Sbjct: 78   NLQLAQQELSVIVDLINT-----------VEANDAVTVAGMTRPKPLPNEVLSDLAVSAA 126

Query: 1166 TKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTI 987
             KLQ FR LGKYFKQSAKALEQ++ REARFYG+LIRLQQNWKVKRQR+AA+A GNEGFTI
Sbjct: 127  IKLQGFRSLGKYFKQSAKALEQQVVREARFYGALIRLQQNWKVKRQRIAAAASGNEGFTI 186

Query: 986  DLYDNSLYDPAVVIRPS-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAH-------- 834
            DL+DNSLYDPA V RP+ +S+VRV+HD AGMLA+ LPPNSCRSL FGFFG H        
Sbjct: 187  DLFDNSLYDPASVYRPTFLSMVRVEHDPAGMLAINLPPNSCRSLQFGFFGVHPCDNTEPN 246

Query: 833  -SQFSVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSIGVN 657
             ++      S+ET+K++ ++DDEC+KETHL+LR+VHQ+IF E+VFDLVNREAF+ S+GVN
Sbjct: 247  KTKVGSSVHSRETEKEA-ANDDECIKETHLLLRQVHQSIFDEKVFDLVNREAFNQSLGVN 305

Query: 656  VTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSD--DEVKLVEV- 486
            VTGIRENYLQLSIG   SVFI L++S +D +    A  Q +E A+LP D  D VKL E  
Sbjct: 306  VTGIRENYLQLSIGLGNSVFISLVSSNQDDQTGDDAGNQDIENAILPLDSLDGVKLPEED 365

Query: 485  ------KKSAFPNRISFEIYLQQIFHEHAFVRGKDK---TIPSGRGQSTKEEKFGLLGHF 333
                  K+   P+ IS EIYLQQ+FHEH F R KDK   T+    GQ  KE    LLGHF
Sbjct: 366  KQDTFNKELGTPDYISCEIYLQQLFHEHVFSRAKDKPVSTVSRVSGQPAKEGP-SLLGHF 424

Query: 332  CMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSIL------- 174
            C+SL+HRIFS KV+  LE+LV  V YL L++HPTW+SRTSSWT+ MK+PQSIL       
Sbjct: 425  CLSLAHRIFSKKVLVVLENLVSGVSYLQLLSHPTWNSRTSSWTIFMKIPQSILHGGSHQT 484

Query: 173  ----HMKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLP 6
                HMK+  KSQFRTKVV+ DD ISVEGEG PNVVGLFK  ++++ SMN+YEC+L DLP
Sbjct: 485  SDLHHMKSTTKSQFRTKVVIKDDFISVEGEGAPNVVGLFKGSAQEVSSMNRYECNLEDLP 544

Query: 5    V 3
            V
Sbjct: 545  V 545


>ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prunus persica]
            gi|462400139|gb|EMJ05807.1| hypothetical protein
            PRUPE_ppa002594mg [Prunus persica]
          Length = 654

 Score =  624 bits (1608), Expect = e-176
 Identities = 348/539 (64%), Positives = 399/539 (74%), Gaps = 31/539 (5%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLPWQSLME 1347
            IEENG ERFP DVGY+EKR SLIRRIDFAWAV                      WQS++E
Sbjct: 20   IEENGLERFPPDVGYEEKRQSLIRRIDFAWAVEKDENKKQKKSSKESAATQW-QWQSMVE 78

Query: 1346 NLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSAA 1167
            NLQLAHQELSVIIDLINT           VE ND VTVA MT+PKP  +E +SDLAVSAA
Sbjct: 79   NLQLAHQELSVIIDLINT-----------VETNDAVTVASMTRPKPFHDEVMSDLAVSAA 127

Query: 1166 TKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTI 987
            TKLQCFRHLGKYFKQSAKALE+++ REARFYG+LIRLQQNWKVKRQR+AASA GNEGFTI
Sbjct: 128  TKLQCFRHLGKYFKQSAKALERQVAREARFYGALIRLQQNWKVKRQRVAASASGNEGFTI 187

Query: 986  DLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGA--------H 834
            DL+D+SLYDPA + RP S+S VRVDHDSAGMLA+ LPPNS RSL FGF GA         
Sbjct: 188  DLFDSSLYDPAAIFRPSSLSTVRVDHDSAGMLAINLPPNSYRSLQFGFLGADPGVSPIES 247

Query: 833  SQFSVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSIGVNV 654
            SQ  +  SS E +K+S S DDECVKETH +LREVHQAIF EQVFDLVNREAF+ S+GVNV
Sbjct: 248  SQTKIRLSS-EAEKESVS-DDECVKETHSLLREVHQAIFDEQVFDLVNREAFNQSLGVNV 305

Query: 653  TGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSD--DEVKLVE--- 489
            TGI+ENYLQL+IGQ  SVFI L+ S  +   D  + TQ LE  +LP D  D ++L E   
Sbjct: 306  TGIQENYLQLNIGQGTSVFISLVPSRGEQTVDSPS-TQNLENTILPLDTLDGLELAEDKP 364

Query: 488  --VKK-SAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSG---RGQSTKEEKFGLLGHFCM 327
              VKK S  P++IS EIYLQQIFH+H FV+ KD+   +G    GQ  KE   GLLGHFCM
Sbjct: 365  DTVKKTSLIPDQISCEIYLQQIFHQHVFVKAKDRPTSAGARVSGQLAKEGP-GLLGHFCM 423

Query: 326  SLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSIL--------- 174
            SL+HRIFSNKV+ ELE++V  VPYL L++HPTWHSRTSSW L +K+P+SIL         
Sbjct: 424  SLAHRIFSNKVLKELENVVKGVPYLQLLSHPTWHSRTSSWMLFVKIPESILHACQTRTSD 483

Query: 173  --HMKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPV 3
              HM+N  KSQF TKVVVTDD I+VEGEG PNVVGLFK  SE++C MN+Y+CDLADLPV
Sbjct: 484  MRHMRNITKSQFHTKVVVTDDCINVEGEGAPNVVGLFKGNSEEICLMNRYDCDLADLPV 542


>ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Fragaria vesca subsp. vesca]
          Length = 655

 Score =  613 bits (1580), Expect = e-173
 Identities = 335/537 (62%), Positives = 388/537 (72%), Gaps = 29/537 (5%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLPWQSLME 1347
            IEENG ERFP +VGY+EKR SLIRRIDFAWAV                      +QS+++
Sbjct: 20   IEENGLERFPPEVGYEEKRESLIRRIDFAWAVEKDDKSKQKKRSRETSAPAQWEFQSMVD 79

Query: 1346 NLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSAA 1167
            NL LAHQELSVI+DLINT           VEAND VTVA MT+P+P PNE LSDLAVSAA
Sbjct: 80   NLHLAHQELSVIVDLINT-----------VEANDAVTVASMTRPRPFPNEALSDLAVSAA 128

Query: 1166 TKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTI 987
            TKLQCFRHLGKYFKQSA ALEQ++ REARFYG+LIRLQQNWKVKRQR  A A GNEGFTI
Sbjct: 129  TKLQCFRHLGKYFKQSANALEQQMAREARFYGALIRLQQNWKVKRQRAVALASGNEGFTI 188

Query: 986  DLYDNSLYDPAVVIRPS-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQFSVEYS 810
            DL+DNSLYDPA + RPS +S V VDHDSAGMLA+ LPP S RSL FGF  A++  +   S
Sbjct: 189  DLFDNSLYDPAGIFRPSPLSTVCVDHDSAGMLAINLPPKSYRSLRFGFISAYTDDTPTES 248

Query: 809  SKETKKDSPSD-------DDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSIGVNVT 651
            SK TK  S SD       DDECVKETH +LREVHQAIF+EQVFDLVNREA + S+GVNVT
Sbjct: 249  SK-TKTQSSSDADKESVSDDECVKETHSLLREVHQAIFSEQVFDLVNREACNQSLGVNVT 307

Query: 650  GIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSD--DEVKLVE---- 489
            GI+ENYLQL+I Q+ SVFI L+ + +  E      TQ LE A+LP D  D + L E    
Sbjct: 308  GIQENYLQLNIDQDTSVFISLVPTNQGEETVDSPSTQNLENAILPLDTLDGLNLPEDKPD 367

Query: 488  --VKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSG--RGQSTKEEKFGLLGHFCMSL 321
               KKS  PN+IS EIYL QIFH+H F++ KD+    G   GQ  KE   GLLGHFCMSL
Sbjct: 368  TPKKKSIIPNQISCEIYLLQIFHQHVFLKAKDRPTSGGGVSGQPAKEGS-GLLGHFCMSL 426

Query: 320  SHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSIL----------- 174
            +HRIFSNKV+ ELE++V  VPY+ L +HPTWHSRTSSWTL +K+PQSIL           
Sbjct: 427  AHRIFSNKVLMELENVVRGVPYMQLTSHPTWHSRTSSWTLVVKIPQSILHACQIRVSDSH 486

Query: 173  HMKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPV 3
            H K+  KSQF TKVVVTDD I+++GEG PNVVGLFK  S+++CSMN+Y+CDLADL V
Sbjct: 487  HTKHVTKSQFHTKVVVTDDCINIDGEGAPNVVGLFKGTSQEVCSMNRYDCDLADLSV 543


>ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Citrus sinensis]
          Length = 657

 Score =  612 bits (1579), Expect = e-172
 Identities = 334/538 (62%), Positives = 385/538 (71%), Gaps = 30/538 (5%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLP---WQS 1356
            IEE GAERFP DVGYDEKR SLIRRIDFAWAV                   +     WQ+
Sbjct: 20   IEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKSSKESSSSATTTPWQWQN 79

Query: 1355 LMENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAV 1176
            ++ENLQ AHQELSVIIDLINT           VEAND VTVAGMT+PK LPNE LSDL+V
Sbjct: 80   MVENLQFAHQELSVIIDLINT-----------VEANDAVTVAGMTRPKALPNEVLSDLSV 128

Query: 1175 SAATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEG 996
            SAATKLQC+RHLG YFKQSAK+LEQ+I +EARFYG+LIRLQQNWKVKRQR+AA A GNEG
Sbjct: 129  SAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAPASGNEG 188

Query: 995  FTIDLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQFSV 819
            FTIDL+DNSLYD A V RP S+S +R+DHDSAGMLA+ LPPNSCRS  FGF G  S  S 
Sbjct: 189  FTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGVQSGDSS 248

Query: 818  EYSSKETKKDSPS---------DDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSI 666
            +  SK     SP          +DDECV+E H +LREVHQAIF EQVFD+VNREAF  S+
Sbjct: 249  KQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLREVHQAIFYEQVFDIVNREAFKQSL 308

Query: 665  GVNVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSD--DEVKLV 492
            GVNVTGIRENYLQL IG   S+F+ L+ S +   +      Q +E+ +LP D  D VKL 
Sbjct: 309  GVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVNQNVESGILPLDSHDGVKLA 368

Query: 491  EV------KKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSG---RGQSTKEEKFGLLG 339
            E       K   +PN +++EIYLQQ+FHE+ + R K+K I +G    G  TK+   GLLG
Sbjct: 369  EEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTGTRVSGPPTKDGS-GLLG 427

Query: 338  HFCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILHMKN- 162
            HFC+SL+HRIFSNKV  ELE+ VC VPYLHL++HPTWHSRTSSWT+ +KVPQSILH ++ 
Sbjct: 428  HFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQSILHAESN 487

Query: 161  -----AIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPV 3
                   KS FRT VVV DD I VEGEG PNVVGLFK  SEDM SMNKY+CDLADLPV
Sbjct: 488  SRTAETAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFKGRSEDMSSMNKYDCDLADLPV 545


>ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citrus clementina]
            gi|557554196|gb|ESR64210.1| hypothetical protein
            CICLE_v10007689mg [Citrus clementina]
          Length = 657

 Score =  611 bits (1575), Expect = e-172
 Identities = 333/538 (61%), Positives = 385/538 (71%), Gaps = 30/538 (5%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLP---WQS 1356
            IEE GAERFP DVGYDEKR SLIRRIDFAWAV                   +     WQ+
Sbjct: 20   IEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKRSKESSSSATTTPWQWQN 79

Query: 1355 LMENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAV 1176
            ++ENLQ AHQELSVIIDLINT           VEAND VTVAGMT+PK LPNE LSDL+V
Sbjct: 80   MVENLQFAHQELSVIIDLINT-----------VEANDAVTVAGMTRPKALPNEVLSDLSV 128

Query: 1175 SAATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEG 996
            SAATKLQC+RHLG YFKQSAK+LEQ+I +EARFYG+LIRLQQNWKVKRQR+AA A GNEG
Sbjct: 129  SAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAPASGNEG 188

Query: 995  FTIDLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQFSV 819
            FTIDL+DNSLYD A V RP S+S +R+DHDSAGMLA+ LPPNSCRS  FGF G  S  S 
Sbjct: 189  FTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGVQSGDSS 248

Query: 818  EYSSKETKKDSPS---------DDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSI 666
            +  SK     SP          +DDECV+E H +LREVHQAIF EQVFD+VNREAF  S+
Sbjct: 249  KQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLREVHQAIFYEQVFDIVNREAFKQSL 308

Query: 665  GVNVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSD--DEVKLV 492
            GVNVTGIRENYLQL IG   S+F+ L+ S +   +      Q +E+ +LP D  D VKL 
Sbjct: 309  GVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVNQNVESGILPLDSHDGVKLA 368

Query: 491  EV------KKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSG---RGQSTKEEKFGLLG 339
            E       K   +PN +++EIYLQQ+FHE+ + R K+K I +G    G  TK+   GLLG
Sbjct: 369  EEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTGTRVSGPPTKDGS-GLLG 427

Query: 338  HFCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILHMKN- 162
            HFC+SL+HRIFSNKV  ELE+ VC VPYLHL++HPTWHSRTSSWT+ +KVPQSILH ++ 
Sbjct: 428  HFCLSLAHRIFSNKVRVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQSILHAESN 487

Query: 161  -----AIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPV 3
                   KS FRT VVV DD I VEGEG PNVVGLF+  SEDM SMNKY+CDLADLPV
Sbjct: 488  SRTAETAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFEGRSEDMSSMNKYDCDLADLPV 545


>ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Solanum lycopersicum]
          Length = 663

 Score =  600 bits (1547), Expect = e-169
 Identities = 331/547 (60%), Positives = 393/547 (71%), Gaps = 39/547 (7%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSL------P 1365
            IEE GAERFPSD+GYDEK ++LIRRIDFAWAV                            
Sbjct: 20   IEEQGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEPSKKQKKSSSATSSKETSSSQPWQ 79

Query: 1364 WQSLMENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSD 1185
            WQSL+ENL+LAHQEL VIIDLI+T           VEAND VTVAGMT+PK LPNE LSD
Sbjct: 80   WQSLVENLRLAHQELQVIIDLIHT-----------VEANDAVTVAGMTRPKQLPNEHLSD 128

Query: 1184 LAVSAATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPG 1005
            LAVS ATKLQCFRHLGKYFKQSAKALEQ++ REARFYG+LIRLQQNWKVK  R+ A+A G
Sbjct: 129  LAVSMATKLQCFRHLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKVKWHRMVAAASG 188

Query: 1004 NEGFTIDLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGA--- 837
            NEGF IDL+D SLYDPAV  RP S S+VR++HD AGMLAV LPPNSCR+L F F GA   
Sbjct: 189  NEGFYIDLFDTSLYDPAVAFRPSSASVVRIEHDPAGMLAVNLPPNSCRTLQFEFLGASTP 248

Query: 836  -----HSQF----SVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNRE 684
                 HS+     S E SS ETK++    DDE V+ETH  LREVH+AIF EQVFDLVNRE
Sbjct: 249  AGVIKHSRLRPKVSFEDSSGETKRE--KSDDEHVRETHSTLREVHRAIFDEQVFDLVNRE 306

Query: 683  AFSPSIGVNVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLP---- 516
            AF+P++G +VTGI+EN L+LSIGQ AS+ I L+ S  DG+       +  ETA++P    
Sbjct: 307  AFNPALGADVTGIQENLLRLSIGQRASLSISLVPSADDGQTANAVGDEHPETAIVPFESV 366

Query: 515  ---SDDEVKLVEVKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSGRGQ-STKEEKFG 348
                 DE KL ++KK  FPNRISFEIYLQQ+FHEH F++ K++    G+ + S++  K G
Sbjct: 367  DASKQDEGKL-DLKKLGFPNRISFEIYLQQLFHEHVFIKAKNRLSSLGKPEISSQPVKDG 425

Query: 347  --LLGHFCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSIL 174
              LLGHFC+SL+HRIFSNKV+ ELESLV RVPY+ LI+HPTWHSRTSSWTLSM VP+SIL
Sbjct: 426  PNLLGHFCVSLAHRIFSNKVLAELESLVSRVPYVQLISHPTWHSRTSSWTLSMDVPESIL 485

Query: 173  H----------MKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYEC 24
            H          +KN +K  FRTKV+V DD IS+EGEG PN+VGLFK   + +C MN+Y+C
Sbjct: 486  HAGSLSHSSDYVKN-VKFHFRTKVMVRDDCISLEGEGAPNIVGLFKGKPDSICPMNRYDC 544

Query: 23   DLADLPV 3
            DL+DLP+
Sbjct: 545  DLSDLPM 551


>ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Solanum tuberosum]
          Length = 663

 Score =  596 bits (1537), Expect = e-168
 Identities = 332/546 (60%), Positives = 390/546 (71%), Gaps = 38/546 (6%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSL------P 1365
            IEE GAERFPSD+GYDEK ++LIRRIDFAWAV                            
Sbjct: 20   IEEQGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEPSKKQKKSSSATSSKETSSSQPWQ 79

Query: 1364 WQSLMENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSD 1185
            WQSL+ENL+LAHQEL VIIDLI+T           VEAND VTVA MT+PK LPNE LSD
Sbjct: 80   WQSLVENLRLAHQELQVIIDLIHT-----------VEANDAVTVASMTRPKQLPNEHLSD 128

Query: 1184 LAVSAATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPG 1005
            LAVS ATKLQCFRHLGKYFKQSAKALEQ++ REARFYG+LIRLQQNWKVK  R+ A+A G
Sbjct: 129  LAVSMATKLQCFRHLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKVKWHRMVAAASG 188

Query: 1004 NEGFTIDLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGA--- 837
            NEGF IDL+D SLYDPAV  RP S S+VR++HD AGMLAV LPPNSCR+L F F GA   
Sbjct: 189  NEGFYIDLFDTSLYDPAVAFRPSSASVVRIEHDPAGMLAVNLPPNSCRTLQFEFLGASAP 248

Query: 836  -----HSQF----SVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNRE 684
                 HS+     S E SS ETK++    DDE V+ETH  LREVH+AIF EQVFDLVNRE
Sbjct: 249  SGVINHSRLKPKGSFEDSSGETKRE--KSDDEHVRETHSTLREVHRAIFDEQVFDLVNRE 306

Query: 683  AFSPSIGVNVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLP--SD 510
            AF+P++G +VTGI+EN L+LSIGQ AS+ I L+ S  DG+       +  ETA++P  S 
Sbjct: 307  AFNPALGADVTGIQENLLRLSIGQRASLSISLVPSTDDGQTANAVGDEHSETAIVPFESV 366

Query: 509  DEVKLVE----VKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSGRGQ-STKEEKFG- 348
            D  KL E     KK  FPNRISFEIYLQQ+FHEH F++ K++    G+ Q S++  K G 
Sbjct: 367  DASKLDEGKFNFKKLGFPNRISFEIYLQQLFHEHVFIKAKNRLSSLGKPQLSSQPVKDGP 426

Query: 347  -LLGHFCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILH 171
             LLGHFC+SL+HRIFSNKV+ ELESLV R+PY+ LI+HPTWHSRTSSWTLSM VP+SILH
Sbjct: 427  NLLGHFCVSLAHRIFSNKVLAELESLVSRIPYVQLISHPTWHSRTSSWTLSMDVPESILH 486

Query: 170  ----------MKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECD 21
                      +KN +K  FRTKV+V DD IS+EGEG PNVVGLFK   +  C MN+Y+CD
Sbjct: 487  AGSLSHSSDYVKN-VKFHFRTKVMVRDDCISLEGEGAPNVVGLFKGKPDSTCPMNRYDCD 545

Query: 20   LADLPV 3
            L+DLP+
Sbjct: 546  LSDLPM 551


>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Cucumis sativus]
            gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17-like [Cucumis
            sativus]
          Length = 662

 Score =  593 bits (1530), Expect = e-167
 Identities = 322/541 (59%), Positives = 384/541 (70%), Gaps = 33/541 (6%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLPWQSLME 1347
            IEENG ERFPSDVGY+EKRLSLIRRIDFAWA+                      WQS++E
Sbjct: 20   IEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPW-QWQSMIE 78

Query: 1346 NLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSAA 1167
            NLQLAHQELSVIIDLINT           VEAND VTVAGMT+PKPLPNE L+DL VS A
Sbjct: 79   NLQLAHQELSVIIDLINT-----------VEANDAVTVAGMTRPKPLPNEVLADLGVSVA 127

Query: 1166 TKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTI 987
            TKLQCFRHLGKYFKQSAK LE+++ REARFYG+LIRLQQNWKVKRQR+AA AP NEGFTI
Sbjct: 128  TKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTI 187

Query: 986  DLYDNSLYDPAVVIRPSMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFF-GAHSQFSVEYS 810
            DL+DNS  DP+ V RPS S +RVDHDS+GMLA+ LPPNSC SL FGF  G + +  +E  
Sbjct: 188  DLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERD 247

Query: 809  SKETKKDSP----------SDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSIGV 660
              E+   S           ++DDE +KET+ +LR+VH AIF+EQVFDLVN+EAF+PS+G+
Sbjct: 248  KNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEAFNPSVGI 307

Query: 659  NVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSD--DEVKLVE- 489
            NVTGIRENYLQLSI Q  SVFI L+ SG+  +    A+++ LE A LP D  D ++L + 
Sbjct: 308  NVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDR 367

Query: 488  ----VKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSGRGQS--TKEEKFGLLGHFCM 327
                 KK   PN I+FEIYLQQIFHE  FV+  D+ I S   QS     +  GLLGHFC+
Sbjct: 368  SDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCL 427

Query: 326  SLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILH-------- 171
            SL+HR+F+N V+ ELE++V +VP+L LI+HPTW+SR SSWT  M+VP SILH        
Sbjct: 428  SLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKART 487

Query: 170  -----MKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLP 6
                 M N  K+QF TKVVV DD I++EGEG PNVVGLF   S+D+ S N+Y CDLADLP
Sbjct: 488  SDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLP 547

Query: 5    V 3
            V
Sbjct: 548  V 548


>ref|XP_007013395.1| RNA polymerase II transcription mediators isoform 6, partial
            [Theobroma cacao] gi|508783758|gb|EOY31014.1| RNA
            polymerase II transcription mediators isoform 6, partial
            [Theobroma cacao]
          Length = 527

 Score =  592 bits (1527), Expect = e-166
 Identities = 331/543 (60%), Positives = 384/543 (70%), Gaps = 35/543 (6%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLP-WQSLM 1350
            IEENG ER+P ++ YDEKR+SLIRRIDFAWA+                   +   W  L+
Sbjct: 8    IEENGVERYPHELSYDEKRVSLIRRIDFAWALETDEERERKKKQKKKNSKDATATW--LV 65

Query: 1349 ENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSA 1170
            ENLQLAHQELSVIIDLINT           VEAND VTVAGMT+PKPLPNE LSDLAVSA
Sbjct: 66   ENLQLAHQELSVIIDLINT-----------VEANDAVTVAGMTRPKPLPNEVLSDLAVSA 114

Query: 1169 ATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFT 990
            ATKLQC+RHLGKYFKQSAKALEQ+I REARFYG+LIRLQQNWKVKRQR+AA +  NEGFT
Sbjct: 115  ATKLQCYRHLGKYFKQSAKALEQQIAREARFYGALIRLQQNWKVKRQRVAAPSSSNEGFT 174

Query: 989  IDLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHS------ 831
            IDL+DNSLYD A + RP S+S++ ++HDSAGMLA+ LP NSC SLHFGF G HS      
Sbjct: 175  IDLFDNSLYDSATISRPSSLSVIHIEHDSAGMLAINLPSNSCHSLHFGFLGVHSADIPKE 234

Query: 830  ------QFSVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPS 669
                    SV+ ++++++K+S S DDE VKETHL+LREVHQ+IF +QVFD+VNREAF+ S
Sbjct: 235  SSKIKTHGSVDQTTRDSQKESMS-DDESVKETHLLLREVHQSIFNDQVFDMVNREAFNQS 293

Query: 668  IGVNVTGIRENYLQLSIGQEASVFILLMASGK-DGENDGKADTQKLETAV--LPSDDEVK 498
             GVNVTGIRENYLQLSIGQ  S+FI L+ S K D +    A+ Q LE+A+  L S D+VK
Sbjct: 294  AGVNVTGIRENYLQLSIGQGTSLFISLVPSSKGDDQAVDTANAQNLESAIVSLDSFDDVK 353

Query: 497  L------VEVKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSGRGQSTKEEKFGLLGH 336
                   +  KK  FPNRIS EIYLQQI HEHAF++GKD+   SG   S +  K      
Sbjct: 354  SGEGKHDITEKKWGFPNRISCEIYLQQIVHEHAFIKGKDRPNSSGTRVSGQSGK------ 407

Query: 335  FCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILH----- 171
                                 VCRVPYLHL+THPTWHSRTSSWT+ MKVPQSILH     
Sbjct: 408  ---------------------VCRVPYLHLMTHPTWHSRTSSWTIFMKVPQSILHVESQS 446

Query: 170  -------MKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLAD 12
                   MK+AIKSQFRTKVVV DD I+VEGEG PNVVGLFK  SED+CS+NKY+CDLAD
Sbjct: 447  QKSDFQNMKDAIKSQFRTKVVVNDDRINVEGEGAPNVVGLFKRSSEDICSVNKYDCDLAD 506

Query: 11   LPV 3
            LPV
Sbjct: 507  LPV 509


>ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Populus trichocarpa]
            gi|550322157|gb|ERP52192.1| hypothetical protein
            POPTR_0015s06780g [Populus trichocarpa]
          Length = 667

 Score =  590 bits (1521), Expect = e-166
 Identities = 320/549 (58%), Positives = 386/549 (70%), Gaps = 41/549 (7%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAV------XXXXXXXXXXXXXXXXXXXSLP 1365
            IEENG ERFP+D+GYDEK+++LIRRIDFAWAV                           P
Sbjct: 20   IEENGFERFPTDIGYDEKQVALIRRIDFAWAVEKEDKEKKQKKKQKKSSRESSSTTTPWP 79

Query: 1364 WQSLMENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSD 1185
            WQ+++ENL LAHQELSVIIDLINT           VEAND VTVAGMT+PKPLPNE L+D
Sbjct: 80   WQNMVENLHLAHQELSVIIDLINT-----------VEANDAVTVAGMTRPKPLPNEILAD 128

Query: 1184 LAVSAATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPG 1005
            LAVS ATKLQC+R+LGKYFKQSAKALEQ++ REARFYG+LIRLQQNWKVKRQR+AA APG
Sbjct: 129  LAVSTATKLQCYRNLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKVKRQRVAAIAPG 188

Query: 1004 NEGFTIDLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQ 828
            NEGF IDL+DNSLYD   V +P S+S +R+DHDS GMLA+ LP  SC SL FGF   HS 
Sbjct: 189  NEGFMIDLFDNSLYDSVAVFQPSSLSTIRIDHDSDGMLAINLPSKSCHSLVFGFLSGHSN 248

Query: 827  F-----------SVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNREA 681
                        S++  SK  +K+S S D+ECVK+THL+LR+VH+ IF EQVFD+VNR A
Sbjct: 249  VPKKSNKIKTHGSLKNPSKNPEKESLS-DNECVKDTHLLLRKVHRTIFDEQVFDMVNRGA 307

Query: 680  FSPSIGVNVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSD--D 507
             + S G+NVTGI+ENYLQL IG   S+FI ++ S +  +       + LE+AV+P D  D
Sbjct: 308  VNQSSGLNVTGIQENYLQLCIGPGISIFISIVPSDQGDQAIDSEGPENLESAVVPLDSFD 367

Query: 506  EVKLVE------VKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSGR---GQSTKEEK 354
             VKL E       KK  FPN I++EIYL+QIFHE+ FV  K +   +G    GQ   +  
Sbjct: 368  GVKLAEEKHNSLTKKPRFPNCITYEIYLKQIFHEYVFVEAKGRPSFTGTRMPGQPANDGS 427

Query: 353  FGLLGHFCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSIL 174
             GLL HFC+SLSHRI SNKV+ ELE++VCRVPYLHLI+HPTWHSR+S+WT+ MK+P SIL
Sbjct: 428  -GLLSHFCLSLSHRIISNKVLMELENVVCRVPYLHLISHPTWHSRSSAWTIFMKIPPSIL 486

Query: 173  H------------MKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKY 30
            H            MKN +KS+F TKVVV DD I++E EG PNVVGLFK  S+D CS NKY
Sbjct: 487  HASSQTRTPDIQNMKNVVKSEFWTKVVVHDDCINIEAEGAPNVVGLFKDSSDDKCSTNKY 546

Query: 29   ECDLADLPV 3
            +C+L DLPV
Sbjct: 547  DCNLDDLPV 555


>ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutrema salsugineum]
            gi|557101675|gb|ESQ42038.1| hypothetical protein
            EUTSA_v10012923mg [Eutrema salsugineum]
          Length = 650

 Score =  579 bits (1493), Expect = e-162
 Identities = 319/538 (59%), Positives = 386/538 (71%), Gaps = 30/538 (5%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSL-PWQSLM 1350
            IEENGAERFPSDV YD+KR+SLIRRIDFAWA+                       W+ ++
Sbjct: 20   IEENGAERFPSDVNYDDKRVSLIRRIDFAWALEEEDELKKKKQKKSSKESSEQWQWKGMV 79

Query: 1349 ENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSA 1170
            ENLQLAHQELSVIIDLINT           VEAND VTVAGMTKPKP+PNE LSDLAVS 
Sbjct: 80   ENLQLAHQELSVIIDLINT-----------VEANDAVTVAGMTKPKPMPNELLSDLAVST 128

Query: 1169 ATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFT 990
            ATKLQ +RHLGKYFKQSAKALEQK+ REARFYG+LIRLQ+NWKVKRQR+ AS   NEGFT
Sbjct: 129  ATKLQSYRHLGKYFKQSAKALEQKVNREARFYGALIRLQRNWKVKRQRVLASNASNEGFT 188

Query: 989  IDLYDNSLYDPAVVIRPS-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHS----QF 825
            IDL D+SLYDP    RPS +S +RV+HDSAGMLA+ LP +S  SL FGF G +S      
Sbjct: 189  IDLSDSSLYDPTSGFRPSTLSTIRVEHDSAGMLAINLPQDSWYSLRFGFVGLNSIDNPNE 248

Query: 824  SVEYSSKETKKDSPSD-----DDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSIGV 660
            S E+    T +D+ S+     D+E VKETH +LREVH++IFAEQ+FD++NREAFS  +G 
Sbjct: 249  SAEHIDSTTGQDTTSEKLSVSDEESVKETHSLLREVHKSIFAEQLFDMLNREAFSEGVGF 308

Query: 659  NVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLP--SDDEVKLVE- 489
            +++GIREN+L++SIGQ AS+F+ L  SGK+      A  +K E+A++P  S   ++LVE 
Sbjct: 309  SISGIRENFLEMSIGQGASLFVSLYPSGKN------ASIKKSESAIVPMESSGGIELVEG 362

Query: 488  ---VKKSAFPNRISFEIYLQQIFHEHAFVRGKDKT---IPSGRGQSTKEEKFGLLGHFCM 327
               VKK  FP+R S++IYLQQIFHEH F + KD+T         Q+ K+   GLL HFC+
Sbjct: 363  DSRVKKLGFPSRASYDIYLQQIFHEHVFGKAKDQTKSKSSQASNQTAKDNNSGLLDHFCL 422

Query: 326  SLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSI---------- 177
            SL+HRIFS +VV +LES+VC+VPYLHLI+HPTW+SRTSSWT+ M VP SI          
Sbjct: 423  SLAHRIFSTRVVVQLESVVCKVPYLHLISHPTWNSRTSSWTVCMTVPPSIIPQGSSETQS 482

Query: 176  LHMKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPV 3
            L  K  +K+QFRTKVVV DD ISVE E  PNVVGL K+ S ++ SMNKYECDLADLPV
Sbjct: 483  LDGKRNLKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSMNKYECDLADLPV 540


>ref|XP_007154971.1| hypothetical protein PHAVU_003G161800g [Phaseolus vulgaris]
            gi|561028325|gb|ESW26965.1| hypothetical protein
            PHAVU_003G161800g [Phaseolus vulgaris]
          Length = 663

 Score =  567 bits (1460), Expect = e-159
 Identities = 320/543 (58%), Positives = 375/543 (69%), Gaps = 35/543 (6%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLPWQSLME 1347
            IEENG ERFP DV YDEKRLSLIRRIDFAWA+                      WQS++E
Sbjct: 22   IEENGMERFPPDVDYDEKRLSLIRRIDFAWAIEKDEEKKKQKKSSKETSTPW-QWQSMVE 80

Query: 1346 NLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSAA 1167
            NLQLAHQELSVIIDLINT           VEAND VTVA MT+PK  PNE LSDLAVSAA
Sbjct: 81   NLQLAHQELSVIIDLINT-----------VEANDAVTVASMTRPKLQPNEALSDLAVSAA 129

Query: 1166 TKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTI 987
            +KLQC+R +GKYFKQSAKA EQ++ REARFYG+LIRLQQNWKVKRQR AA  PGNEGFT 
Sbjct: 130  SKLQCYRQVGKYFKQSAKAFEQQVAREARFYGALIRLQQNWKVKRQRQAAIVPGNEGFTF 189

Query: 986  DLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQ------ 828
            DL+DNS YD A +IR  SMS VRV+HD+AGMLA+ + P+ CRSL FGF GA S       
Sbjct: 190  DLFDNS-YDQASIIRSLSMSTVRVNHDAAGMLAINMSPDLCRSLQFGFVGAQSDDIPRNS 248

Query: 827  ------FSVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSI 666
                  FSVE+S  ET K+S + D+ECVK+TH +LREVH+AIF E VFDLVNREAF+   
Sbjct: 249  KGNKSYFSVEHSLGETGKESLT-DEECVKKTHALLREVHEAIFNEHVFDLVNREAFTTVT 307

Query: 665  GVNVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSDD------E 504
            GV+VTGIRENYL+LS+G+  SV++ L+++G+D        T   E A+LP +       E
Sbjct: 308  GVSVTGIRENYLELSLGRGTSVYLSLVSNGQDHSTVENELTNNAENAMLPPESSDEMMLE 367

Query: 503  VKLVEVKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSGR---GQSTKEEKFG---LL 342
             K    KK  F N I +EIY+QQIFHEH F +G +K I SG    G   KE K G   LL
Sbjct: 368  AKQNAPKKGLFSNSICYEIYIQQIFHEHIFGKGGEKPISSGNRLSGVQAKETKDGGSNLL 427

Query: 341  GHFCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILH--- 171
            GHF MSLSHRIFS KV+ ELE++V +VPYL LI++PTWHSR SSWTL M+VPQSIL    
Sbjct: 428  GHFFMSLSHRIFSTKVLAELENVVSKVPYLQLISNPTWHSRASSWTLYMEVPQSILRGSQ 487

Query: 170  -------MKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLAD 12
                    KNA+K QF  K VV D+ I+V+ EG PNV GLFK   E+  S+NKY C+LAD
Sbjct: 488  IKTSDYFEKNAVKRQFWIKAVVNDNCINVKAEGSPNVAGLFKGKIEETHSINKYNCNLAD 547

Query: 11   LPV 3
            LPV
Sbjct: 548  LPV 550


>ref|XP_003549778.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like isoform X1 [Glycine max]
            gi|571535792|ref|XP_006600757.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17-like isoform
            X2 [Glycine max]
          Length = 660

 Score =  567 bits (1460), Expect = e-159
 Identities = 317/539 (58%), Positives = 373/539 (69%), Gaps = 31/539 (5%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLPWQSLME 1347
            IEENG ERFP DV YDEKRLSLIRRIDFAWAV                      WQ ++E
Sbjct: 22   IEENGIERFPLDVDYDEKRLSLIRRIDFAWAVEKDEEKKKKKQKSSKETSAPWQWQGMVE 81

Query: 1346 NLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSAA 1167
            NLQLAHQELSVIIDLINT           VEAND VTVA MT+PK LPNE LSDLAVSAA
Sbjct: 82   NLQLAHQELSVIIDLINT-----------VEANDAVTVASMTRPKLLPNEALSDLAVSAA 130

Query: 1166 TKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTI 987
            TKLQC+RH+GKYFKQSAKA EQ++ REARFYG+LIRLQQNWKVKRQR AA  PGNEGFT 
Sbjct: 131  TKLQCYRHVGKYFKQSAKAFEQQVAREARFYGALIRLQQNWKVKRQRQAAIVPGNEGFTF 190

Query: 986  DLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAH-------- 834
            DL DNS YD A +IR  SMS VRV+HD+AGMLA+ + P+ C SL FGF GA         
Sbjct: 191  DLLDNS-YDQAAIIRSLSMSTVRVNHDAAGMLAINVSPDLCHSLQFGFVGAQSDDTWRKS 249

Query: 833  ----SQFSVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSI 666
                S FS E++  E  ++S S D+ECVK+T+ +LREVH+AIF EQVFDLVNREAF+   
Sbjct: 250  NENKSHFSGEHNLGEMGEESLS-DEECVKKTNSLLREVHEAIFNEQVFDLVNREAFNTVA 308

Query: 665  GVNVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSDD------E 504
            GV+VTGIRENYLQLS+GQ  SV++ L+++ +D           +E A+LP +       E
Sbjct: 309  GVSVTGIRENYLQLSLGQGTSVYLTLVSNSQDHSTVEDELNDNVENAILPLESSDGMKRE 368

Query: 503  VKLVEVKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSGRGQSTKEEKFG--LLGHFC 330
             K    KK  F N I +EIY+QQIFHEH F +G +K I SG   S  + + G  LLGHF 
Sbjct: 369  AKQNTSKKGQFSNSICYEIYIQQIFHEHIFGKGDEKAISSGNRLSGVQARDGSSLLGHFF 428

Query: 329  MSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSIL-------- 174
             SL+HRIFS KV+ ELE++VC+VPYL LI++PTW+SR SSWTL M+VPQSIL        
Sbjct: 429  KSLAHRIFSTKVLAELENVVCKVPYLQLISNPTWNSRASSWTLYMEVPQSILRGSQTKTS 488

Query: 173  --HMKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPV 3
              + KNA K QF TKVVV DD I+V+ EG PNV GLFK   E+  S+NKY C+LADLPV
Sbjct: 489  DYYEKNAAKRQFWTKVVVNDDCINVKAEGSPNVAGLFKGKIEETHSINKYNCNLADLPV 547


>ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like isoform X1 [Glycine max]
            gi|571454302|ref|XP_006579749.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17-like isoform
            X2 [Glycine max]
          Length = 659

 Score =  566 bits (1459), Expect = e-159
 Identities = 318/539 (58%), Positives = 373/539 (69%), Gaps = 31/539 (5%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSLPWQSLME 1347
            IEENG ERFP DV YDEKRLSLIRRIDFAWAV                      WQ ++E
Sbjct: 22   IEENGIERFPPDVDYDEKRLSLIRRIDFAWAVEKDEEKKKKQKSSKETSTPW-QWQGMVE 80

Query: 1346 NLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSAA 1167
            NLQLAHQELSVIIDLINT           VEAND VTVA MT+PK LPNE LSDLAVSAA
Sbjct: 81   NLQLAHQELSVIIDLINT-----------VEANDAVTVASMTRPKLLPNEALSDLAVSAA 129

Query: 1166 TKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTI 987
            TKLQC+RH+GKYFKQSAKA EQ++ REARFYG+LIRLQQNWKVKRQR AA  PGNEGFT 
Sbjct: 130  TKLQCYRHVGKYFKQSAKAFEQQVAREARFYGALIRLQQNWKVKRQRQAAIVPGNEGFTF 189

Query: 986  DLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAH-------- 834
            DL+DNS YD A +IR  SMS VRV+HD+AG LA+ + P+ C SL FGF GA         
Sbjct: 190  DLFDNS-YDQAAIIRSLSMSTVRVNHDAAGNLAINVSPDLCHSLQFGFVGAQSDDTRRKS 248

Query: 833  ----SQFSVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSI 666
                S FS E +  +T ++S S D+ECVK+TH +LREVH+AIF EQVFDLVNREAF+   
Sbjct: 249  NQNKSHFSGELNLGKTGEESLS-DEECVKKTHSLLREVHEAIFNEQVFDLVNREAFNTVA 307

Query: 665  GVNVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSDD------E 504
            GV+VTGIRENYLQLS+GQE SV++ L+++ +D        T   E A+LP +       E
Sbjct: 308  GVSVTGIRENYLQLSLGQETSVYLTLVSNSQDHSTVEGELTDNAENAILPLESSDGMKRE 367

Query: 503  VKLVEVKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPSGRGQSTKEEKFG--LLGHFC 330
             K     K  F N I +EIY+QQIFHE+ F +G DK   SG   S  + K G  LLGHF 
Sbjct: 368  AKQNTSNKGQFSNSICYEIYIQQIFHEYIFGKGGDKPSSSGNRLSGIQAKDGSSLLGHFF 427

Query: 329  MSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSIL-------- 174
             SL+HRIFS KV+ ELE++VC+VPY+ LI++PTWHSR SSWTL M+VPQSIL        
Sbjct: 428  KSLAHRIFSTKVLAELENVVCKVPYIQLISNPTWHSRASSWTLYMEVPQSILRGSQTKTS 487

Query: 173  --HMKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPV 3
              + KNA+K QF TKVVV DD I+V+ EG PNV GLFK   E+  S+NKY C+LADLPV
Sbjct: 488  DYYEKNAVKRQFWTKVVVNDDCINVKAEGSPNVAGLFKGKIEETHSINKYNCNLADLPV 546


>ref|XP_006286416.1| hypothetical protein CARUB_v10002972mg [Capsella rubella]
            gi|482555122|gb|EOA19314.1| hypothetical protein
            CARUB_v10002972mg [Capsella rubella]
          Length = 651

 Score =  554 bits (1428), Expect = e-155
 Identities = 304/541 (56%), Positives = 376/541 (69%), Gaps = 33/541 (6%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSL-PWQSLM 1350
            IEENGAE FPSDV YD+KR+SLIRRIDFAWA+                       W+ ++
Sbjct: 20   IEENGAEHFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKKKQKKSSKDSTEQWKWKGMV 79

Query: 1349 ENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSA 1170
            ENLQLAHQELSVIIDLI+T           V+AND VTVAGMT+PKP+PNE LSDLAVS 
Sbjct: 80   ENLQLAHQELSVIIDLIDT-----------VQANDAVTVAGMTRPKPMPNEILSDLAVST 128

Query: 1169 ATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFT 990
            ATKLQ +R+LGKYFKQSAKALEQKI REARFYG+LIRLQ+NWKVKRQR+ AS   NEGFT
Sbjct: 129  ATKLQGYRNLGKYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLASNASNEGFT 188

Query: 989  IDLYDNSLYDPAVVIRPS-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQFSVEY 813
            IDL D+SLYDP    RPS +S +RVDHDSAGMLA+ +P +S  SL FGF G ++  +   
Sbjct: 189  IDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGFVGLNTIDNPNE 248

Query: 812  SSKE-----------TKKDSPSDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSI 666
            S +            T +   + DD+ VKETH +LREVH++IFAEQ+FD++N EAF+  +
Sbjct: 249  SKENIDSITGHDIPGTSETQSASDDKYVKETHSLLREVHKSIFAEQLFDMLNHEAFNEGV 308

Query: 665  GVNVTGIRENYLQLSIGQEASVFILLMASGKDGENDGKADTQKLETAVLPSDDEVKLV-- 492
            G N++GIREN++++SIGQ AS+F+ L  SGK+      A  +K  +A L S+   ++   
Sbjct: 309  GFNISGIRENFMEMSIGQGASLFVSLHPSGKN------ASIKKSNSATLLSESSGRIELG 362

Query: 491  -----EVKKSAFPNRISFEIYLQQIFHEHAFVRGKDKTIPS---GRGQSTKEEKFGLLGH 336
                  +KK  FPNR S+EIYLQQIFHEHAF + KD+          Q+ K+   GLL H
Sbjct: 363  EEGDNRLKKLGFPNRPSYEIYLQQIFHEHAFGKAKDRPKSKSIRASNQTEKDSNSGLLDH 422

Query: 335  FCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILHM---- 168
            FC+SL+HRIFSN+V+  LES+VC+VPYLHLI+HPTW+SRTSSWT+ M VP SI+      
Sbjct: 423  FCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPSIIPQGSSE 482

Query: 167  ------KNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLP 6
                  K  +K+QFRTKVVV DD ISVE E  PNVVGL K+ S ++ SMNKYECD+ADLP
Sbjct: 483  TQSPDGKRNLKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSMNKYECDVADLP 542

Query: 5    V 3
            V
Sbjct: 543  V 543


>ref|NP_197517.3| RNA polymerase II transcription mediator [Arabidopsis thaliana]
            gi|395406781|sp|F4K460.1|MED17_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            17 gi|332005425|gb|AED92808.1| RNA polymerase II
            transcription mediator [Arabidopsis thaliana]
          Length = 653

 Score =  554 bits (1428), Expect = e-155
 Identities = 305/536 (56%), Positives = 379/536 (70%), Gaps = 28/536 (5%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSL-PWQSLM 1350
            IEENGAERFPSDV YD+KR+SLIRRIDFAWA+                       W+ ++
Sbjct: 20   IEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKKKQKKSSKDSVEQWKWKGMV 79

Query: 1349 ENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSA 1170
            ENLQLAHQEL+VIIDLI+T           V+AND VTVAGMT+PKP+PNE LSDLAVS 
Sbjct: 80   ENLQLAHQELTVIIDLIDT-----------VQANDAVTVAGMTRPKPMPNEILSDLAVST 128

Query: 1169 ATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFT 990
            ATKLQ +R+LG YFKQSAKALEQKI REARFYG+LIRLQ+NWKVKRQR+ AS   NEGFT
Sbjct: 129  ATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLASNASNEGFT 188

Query: 989  IDLYDNSLYDPAVVIRPS-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFG----AHSQF 825
            IDL D+SLYDP    RPS +S +RVDHDSAGMLA+ +P +S  SL FG+ G     +S  
Sbjct: 189  IDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGLNPIGNSNE 248

Query: 824  SVEYSSKETKKDSP-------SDDDECVKETHLILREVHQAIFAEQVFDLVNREAFSPSI 666
            S E+    T  D P       + DD+ VKETH +LREVH++IFAEQ+FD++NREAF+  +
Sbjct: 249  SDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLNREAFNEGV 308

Query: 665  GVNVTGIRENYLQLSIGQEASVFILLMASGKDGE-NDGKADTQKLETAVLPSDDEVKLVE 489
            G N++G+REN++++SIGQ AS+F+ L  SGK+      ++ T  +E++      E     
Sbjct: 309  GFNISGLRENFMEMSIGQGASLFVSLHPSGKNPSIKKSESATLLIESSGRVEPAEGGDYR 368

Query: 488  VKKSAFPNRISFEIYLQQIFHEHAFVRGKD----KTIPSGRGQSTKEEKFGLLGHFCMSL 321
            +KK  FPNR S+EIYLQQIFHEHAF + KD    K+I +   Q+ K+   GLL HFC+SL
Sbjct: 369  LKKLGFPNRTSYEIYLQQIFHEHAFGKAKDQLKSKSIRAS-NQTEKDSNSGLLDHFCLSL 427

Query: 320  SHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILHM--------- 168
            +HRIFSN+V+  LES+VC+VPYLHLI+HPTW+SRTSSWT+ M VP SI+           
Sbjct: 428  THRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPSIIPQGRSETQSPD 487

Query: 167  -KNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPV 3
             K  +K+QFRTKVVV DD ISVE E  PNVVGL K+ S ++ S+NKYECD+ADLPV
Sbjct: 488  GKRNLKTQFRTKVVVKDDCISVEAECTPNVVGLLKSSSCNLFSINKYECDVADLPV 543


>ref|XP_007013393.1| RNA polymerase II transcription mediators isoform 4 [Theobroma cacao]
            gi|508783756|gb|EOY31012.1| RNA polymerase II
            transcription mediators isoform 4 [Theobroma cacao]
          Length = 556

 Score =  553 bits (1425), Expect = e-155
 Identities = 295/445 (66%), Positives = 347/445 (77%), Gaps = 37/445 (8%)
 Frame = -2

Query: 1226 MTKPKPLPNETLSDLAVSAATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQN 1047
            MT+PKPLPNE LSDLAVSAATKLQC+RHLGKYFKQSAKALEQ+I REARFYG+LIRLQQN
Sbjct: 1    MTRPKPLPNEVLSDLAVSAATKLQCYRHLGKYFKQSAKALEQQIAREARFYGALIRLQQN 60

Query: 1046 WKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP-SMSIVRVDHDSAGMLAVRLPPNS 870
            WKVKRQR+AA +  NEGFTIDL+DNSLYD A + RP S+S++ ++HDSAGMLA+ LP NS
Sbjct: 61   WKVKRQRVAAPSSSNEGFTIDLFDNSLYDSATISRPSSLSVIHIEHDSAGMLAINLPSNS 120

Query: 869  CRSLHFGFFGAHS------------QFSVEYSSKETKKDSPSDDDECVKETHLILREVHQ 726
            C SLHFGF G HS              SV+ ++++++K+S S DDE VKETHL+LREVHQ
Sbjct: 121  CHSLHFGFLGVHSADIPKESSKIKTHGSVDQTTRDSQKESMS-DDESVKETHLLLREVHQ 179

Query: 725  AIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSIGQEASVFILLMASGK-DGENDGKA 549
            +IF +QVFD+VNREAF+ S GVNVTGIRENYLQLSIGQ  S+FI L+ S K D +    A
Sbjct: 180  SIFNDQVFDMVNREAFNQSAGVNVTGIRENYLQLSIGQGTSLFISLVPSSKGDDQAVDTA 239

Query: 548  DTQKLETAV--LPSDDEVKL------VEVKKSAFPNRISFEIYLQQIFHEHAFVRGKDKT 393
            + Q LE+A+  L S D+VK       +  KK  FPNRIS EIYLQQI HEHAF++GKD+ 
Sbjct: 240  NAQNLESAIVSLDSFDDVKSGEGKHDITEKKWGFPNRISCEIYLQQIVHEHAFIKGKDRP 299

Query: 392  IPSG---RGQSTKEEKFGLLGHFCMSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHS 222
              SG    GQS K    GLLGHF +SL+HRIFSN+V+ +LE++VCRVPYLHL+THPTWHS
Sbjct: 300  NSSGTRVSGQSGKVGS-GLLGHFSLSLAHRIFSNRVLMKLENVVCRVPYLHLMTHPTWHS 358

Query: 221  RTSSWTLSMKVPQSILH------------MKNAIKSQFRTKVVVTDDSISVEGEGGPNVV 78
            RTSSWT+ MKVPQSILH            MK+AIKSQFRTKVVV DD I+VEGEG PNVV
Sbjct: 359  RTSSWTIFMKVPQSILHVESQSQKSDFQNMKDAIKSQFRTKVVVNDDRINVEGEGAPNVV 418

Query: 77   GLFKTFSEDMCSMNKYECDLADLPV 3
            GLFK  SED+CS+NKY+CDLADLPV
Sbjct: 419  GLFKRSSEDICSVNKYDCDLADLPV 443


>ref|XP_002873986.1| hypothetical protein ARALYDRAFT_351112 [Arabidopsis lyrata subsp.
            lyrata] gi|297319823|gb|EFH50245.1| hypothetical protein
            ARALYDRAFT_351112 [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  552 bits (1422), Expect = e-154
 Identities = 306/539 (56%), Positives = 381/539 (70%), Gaps = 31/539 (5%)
 Frame = -2

Query: 1526 IEENGAERFPSDVGYDEKRLSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXSL-PWQSLM 1350
            IEENGAERFPSDVGYD+KR+SLIRRIDFAWA+                       W+ ++
Sbjct: 20   IEENGAERFPSDVGYDDKRVSLIRRIDFAWALEEEDELKKKKQKKSSKDSAEQWKWKGMV 79

Query: 1349 ENLQLAHQELSVIIDLINTXXXXXXXXXXXVEANDVVTVAGMTKPKPLPNETLSDLAVSA 1170
            ENLQLAHQELSVIIDLI+T           V+AND VTVAGMT+PKPLPNE LSDLAVS 
Sbjct: 80   ENLQLAHQELSVIIDLIDT-----------VQANDAVTVAGMTRPKPLPNEILSDLAVST 128

Query: 1169 ATKLQCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFT 990
            ATKLQ +R+LG YFKQSAKALEQKI REARFYG+LIRLQ+NWKVKRQR+ AS   NEGFT
Sbjct: 129  ATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRNWKVKRQRMLASNASNEGFT 188

Query: 989  IDLYDNSLYDPAVVIRPS-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFG--------- 840
            IDL D+SL+DP    RPS +S +RVDHDSAGMLA+ +P +S  SL FGF G         
Sbjct: 189  IDLSDSSLHDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDSWYSLRFGFVGLNPIDNTNE 248

Query: 839  --AHSQFSVEYSSKETKKDSPSDDDECVKETHLILREVHQAIFAEQV-FDLVNREAFSPS 669
               H   ++ +    T +   + DDE VKETH +LREVH++IFAEQV FD++NREAF+  
Sbjct: 249  SDEHLDSTMGHDIPGTSEKQSASDDEYVKETHSLLREVHKSIFAEQVLFDMLNREAFNEG 308

Query: 668  IGVNVTGIRENYLQLSIGQEASVFILLMASGKDGE-NDGKADTQKLETA--VLPSDDEVK 498
            +G N++GIREN++++SIGQ AS+F+ L  SGK+      ++ T  +E++  + P++ + +
Sbjct: 309  VGFNISGIRENFMEMSIGQGASLFVSLHPSGKNASIKKSESATLLIESSGRIEPAEGDYR 368

Query: 497  LVEVKKSAFPNRISFEIYLQQIFHEHAFVRGKD----KTIPSGRGQSTKEEKFGLLGHFC 330
            L   KK  FPNR S+EIYLQQIFHEHAF + KD    K+I +   Q+ K+   GLL HFC
Sbjct: 369  L---KKLGFPNRASYEIYLQQIFHEHAFGKAKDQPKSKSIRAS-NQTRKDSNSGLLDHFC 424

Query: 329  MSLSHRIFSNKVVTELESLVCRVPYLHLITHPTWHSRTSSWTLSMKVPQSILHM------ 168
            +SL+HRIFSN+V+  LES+VC+VPYLHLI+HPTW+SRTSSWT+ M VP SI+        
Sbjct: 425  LSLTHRIFSNRVLEHLESVVCKVPYLHLISHPTWNSRTSSWTVFMTVPPSIIPQGSSETQ 484

Query: 167  ----KNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPV 3
                K  +K QFRTKVVV D+ ISVE E  PNVVGL K+ S ++ +MNKYEC +ADLPV
Sbjct: 485  SPDGKRNLKMQFRTKVVVKDECISVEAECTPNVVGLLKSSSCNLFAMNKYECGVADLPV 543