BLASTX nr result
ID: Paeonia23_contig00045632
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00045632
(300 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 74 5e-19
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A... 66 1e-15
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 50 3e-11
ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292... 72 6e-11
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 62 1e-09
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 60 2e-09
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 68 2e-09
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291... 54 9e-09
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat... 65 1e-08
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 54 3e-08
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta... 50 3e-08
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 50 6e-08
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 50 6e-08
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S... 52 6e-08
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 51 1e-07
ref|XP_007210994.1| hypothetical protein PRUPE_ppa021032mg [Prun... 48 1e-07
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo... 51 2e-07
ref|XP_007203072.1| hypothetical protein PRUPE_ppa023514mg [Prun... 49 2e-07
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 44 2e-07
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ... 50 3e-07
>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 872
Score = 73.6 bits (179), Expect(2) = 5e-19
Identities = 30/64 (46%), Positives = 47/64 (73%)
Frame = +3
Query: 102 ISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSMFFGKY 281
I SPRG L+P ++++A D+I+FCRG ++NL +++ YGS SGQI+NK KS +F GK+
Sbjct: 174 IHSPRGTLSPSYVLFAGDVIVFCRGNRQNLLRVMSFFYEYGSVSGQIINKDKSQVFIGKH 233
Query: 282 TKHK 293
+ +
Sbjct: 234 NRRR 237
Score = 46.2 bits (108), Expect(2) = 5e-19
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLSRHFCM 75
VRQGDPLSPLLFCLAEEVLSR M
Sbjct: 140 VRQGDPLSPLLFCLAEEVLSRGISM 164
>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 751
Score = 65.9 bits (159), Expect(2) = 1e-15
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +3
Query: 102 ISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSMFFGKY 281
IS PRG + H++YADD+ IFCRG ++L + + LDNYG++SGQ++NK KS+ + G
Sbjct: 114 ISLPRGC-SLTHVLYADDLFIFCRGDTKSLRQLQSFLDNYGAASGQLVNKDKSTFYLGAS 172
Query: 282 TKHK 293
H+
Sbjct: 173 HFHR 176
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLSR 63
VRQGDPLSP+LFC+AEE LSR
Sbjct: 80 VRQGDPLSPILFCIAEEALSR 100
>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 642
Score = 50.4 bits (119), Expect(2) = 3e-11
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +3
Query: 102 ISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSMFFGKY 281
I++ R P H Y DD+++FC+ +L + ++ Y SGQIMN RKS +F G
Sbjct: 414 IAASRNNCLPFHCFYVDDLMVFCKAKMSSLIVLKSLFTRYADCSGQIMNIRKSFIFAGGI 473
Query: 282 T 284
T
Sbjct: 474 T 474
Score = 43.1 bits (100), Expect(2) = 3e-11
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLSR 63
VRQGDPLSPLLFC+ EEVLSR
Sbjct: 380 VRQGDPLSPLLFCIVEEVLSR 400
>ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292910 [Fragaria vesca
subsp. vesca]
Length = 851
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/55 (56%), Positives = 43/55 (78%)
Frame = +3
Query: 102 ISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSM 266
ISSPRG +AP H+++ADD+I+FCRG KRNL I++ L++YGS SGQ+ +SM
Sbjct: 580 ISSPRGTIAPSHVLFADDVIVFCRGDKRNLQRIMSFLEDYGSVSGQVPLATNASM 634
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 62.4 bits (150), Expect(2) = 1e-09
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 69 LHGVQNNYLIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMN 248
LH ++N LI G L+ HL++ADD ++F R TK + +N+ + D Y ++SGQI N
Sbjct: 270 LHQAESNQLIHGLKFSGNLSITHLLFADDSLVFTRATKEDCTNLKQLFDCYAAASGQIFN 329
Query: 249 KRKSSMFFGKYTK 287
KSSMFF + K
Sbjct: 330 FEKSSMFFSENAK 342
Score = 25.8 bits (55), Expect(2) = 1e-09
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLS 60
+RQG PLSP LF + EV +
Sbjct: 248 LRQGCPLSPYLFIICAEVFT 267
>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
Length = 1238
Score = 60.1 bits (144), Expect(2) = 2e-09
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = +3
Query: 69 LHGVQNNYLIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMN 248
+HG++ N + IS HL++ADD ++F R T+ + SN+ I D YGS+SGQI N
Sbjct: 590 IHGLRFNSSLSIS---------HLLFADDSLVFARATQEDCSNLKCIFDRYGSASGQIFN 640
Query: 249 KRKSSMFF 272
KSSM F
Sbjct: 641 YEKSSMLF 648
Score = 27.7 bits (60), Expect(2) = 2e-09
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLS 60
+RQG PLSP LF L EV S
Sbjct: 559 LRQGCPLSPYLFLLCAEVFS 578
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
H; Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 67.8 bits (164), Expect = 2e-09
Identities = 30/64 (46%), Positives = 40/64 (62%)
Frame = +3
Query: 93 LIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSMFF 272
LIP+S RG P H++YADD++IFC GTKRN+ ++ I Y SGQ++N KS F
Sbjct: 676 LIPMSYCRGVSFPTHILYADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLINNAKSRFFT 735
Query: 273 GKYT 284
T
Sbjct: 736 SAMT 739
>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
subsp. vesca]
Length = 948
Score = 54.3 bits (129), Expect(2) = 9e-09
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +3
Query: 78 VQNNYLIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRK 257
V +L+ I RG HL +ADD + F + T N+S + AI + Y +SGQ++++ K
Sbjct: 312 VNEKHLLGIKLCRGCPTLSHLFFADDALFFVKATLSNVSKLAAIFEEYCRASGQVISREK 371
Query: 258 SSMFFGKYT 284
SS+FF T
Sbjct: 372 SSIFFSPNT 380
Score = 30.8 bits (68), Expect(2) = 9e-09
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLS 60
+RQGDPLSP LF + E LS
Sbjct: 286 LRQGDPLSPYLFLIVSEALS 305
>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
Length = 480
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = +3
Query: 93 LIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSMFF 272
++P+ RGA P H++YADD++IFC GTK+N+ +L ++Y S QI+N KS +
Sbjct: 139 IVPMFYCRGASIPTHILYADDVLIFCAGTKQNIRCLLKFFNDYSEVSAQIINNNKSQFYA 198
Query: 273 GKYTKHKSK 299
G T S+
Sbjct: 199 GAMTTSHSQ 207
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 54.3 bits (129), Expect(2) = 3e-08
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +3
Query: 81 QNNYLIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKS 260
Q N + + RGA HL++ADD + +C+ L I+ I++ Y +SGQ +N KS
Sbjct: 660 QKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKS 719
Query: 261 SMFFGKYTKHKSK 299
S++FGK+ + +
Sbjct: 720 SIYFGKHISEERR 732
Score = 29.3 bits (64), Expect(2) = 3e-08
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVL 57
+RQGDPLSP LF + E+L
Sbjct: 633 LRQGDPLSPYLFVICTEML 651
>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1044
Score = 50.4 bits (119), Expect(2) = 3e-08
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +3
Query: 135 HLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSMFFGKYT 284
HL++ADD I FCR ++ L IL Y +SGQ++NK KS++ F + T
Sbjct: 504 HLLFADDTIFFCRSDLKSCKTFLCILKKYEEASGQMINKSKSAITFSRKT 553
Score = 32.7 bits (73), Expect(2) = 3e-08
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLS 60
+RQGDPLSP LF + EVLS
Sbjct: 459 LRQGDPLSPFLFIICSEVLS 478
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 50.4 bits (119), Expect(2) = 6e-08
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +3
Query: 114 RGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSMFFGK 278
+ LA HL++ADD + FCR + +N+ + I Y +SGQ +N KSS+ FG+
Sbjct: 1033 KDCLAISHLLFADDSLFFCRASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQ 1087
Score = 32.0 bits (71), Expect(2) = 6e-08
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLS 60
+RQGDPLSP LF EVLS
Sbjct: 995 IRQGDPLSPYLFLFCAEVLS 1014
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 49.7 bits (117), Expect(2) = 6e-08
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +3
Query: 81 QNNYLIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKS 260
Q++ L P++ L HL +ADD + F R T +N + +L Y +SGQ++N KS
Sbjct: 1269 QDSLLTPVTIGPNNLPVSHLFFADDSLFFLRATLQNCETLSDLLHTYCIASGQLINVEKS 1328
Query: 261 SMFFGKYT 284
S+FF T
Sbjct: 1329 SIFFSPNT 1336
Score = 32.7 bits (73), Expect(2) = 6e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLSR 63
+RQGDPLSP LF +VLSR
Sbjct: 1242 LRQGDPLSPFLFLFVNDVLSR 1262
>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
gi|241943773|gb|EES16918.1| hypothetical protein
SORBIDRAFT_08g007680 [Sorghum bicolor]
Length = 649
Score = 52.0 bits (123), Expect(2) = 6e-08
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +3
Query: 135 HLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSMFFGK 278
HL++ADD I+F ++R ++ ILD Y SGQ++N+ KS++FF K
Sbjct: 238 HLLFADDSIVFSEASQRGAERLMEILDIYNRGSGQLVNREKSTVFFSK 285
Score = 30.4 bits (67), Expect(2) = 6e-08
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLS 60
+RQGDP+SP LF L E LS
Sbjct: 193 IRQGDPISPYLFLLCSEGLS 212
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 51.2 bits (121), Expect(2) = 1e-07
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = +3
Query: 135 HLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSMFFGK 278
HL++ADD ++ C+ TK+ ++ L YG SGQ++N KS++ FGK
Sbjct: 677 HLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGK 724
Score = 30.4 bits (67), Expect(2) = 1e-07
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVL 57
+RQGDPLSP LF L E L
Sbjct: 632 IRQGDPLSPALFVLCTEAL 650
>ref|XP_007210994.1| hypothetical protein PRUPE_ppa021032mg [Prunus persica]
gi|462406729|gb|EMJ12193.1| hypothetical protein
PRUPE_ppa021032mg [Prunus persica]
Length = 781
Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +3
Query: 87 NYLIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMNKRKSSM 266
N+L + R HL++ADD + F R +N N+ +LD Y +SGQ +N KSS+
Sbjct: 434 NHLQGLKFGRSGPTLSHLLFADDALFFIRANTQNCRNMRLLLDGYCRASGQQINFGKSSL 493
Query: 267 FFGKYT 284
FF T
Sbjct: 494 FFSPNT 499
Score = 33.1 bits (74), Expect(2) = 1e-07
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLS 60
+RQGDPLSP LF + EVLS
Sbjct: 405 IRQGDPLSPYLFLIVSEVLS 424
>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
Length = 1049
Score = 51.2 bits (121), Expect(2) = 2e-07
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +3
Query: 69 LHGVQNNYLIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMN 248
LHG++N + P S HL++ADD I F + R++ + + L +Y ++SGQ +N
Sbjct: 403 LHGIRNGHQGPPIS--------HLLFADDSIFFAKSDPRSVQVLKSTLQSYCNASGQKIN 454
Query: 249 KRKSSMFFGKY 281
+KSS+ FG+Y
Sbjct: 455 LQKSSLLFGRY 465
Score = 29.6 bits (65), Expect(2) = 2e-07
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLS 60
+RQGDP+SP LF L E LS
Sbjct: 372 IRQGDPVSPYLFLLCTEGLS 391
>ref|XP_007203072.1| hypothetical protein PRUPE_ppa023514mg [Prunus persica]
gi|462398603|gb|EMJ04271.1| hypothetical protein
PRUPE_ppa023514mg [Prunus persica]
Length = 670
Score = 49.3 bits (116), Expect(2) = 2e-07
Identities = 25/72 (34%), Positives = 42/72 (58%)
Frame = +3
Query: 69 LHGVQNNYLIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIMN 248
L ++ +L I R HLM+ DD +IF R T++N +N++ +L+ Y +SGQ ++
Sbjct: 207 LKACESGFLQGIKLRRSGPTLSHLMFTDDTLIFLRATEQNYTNMVQLLNAYCRASGQQIS 266
Query: 249 KRKSSMFFGKYT 284
KS++FF T
Sbjct: 267 LAKSTIFFSPNT 278
Score = 31.6 bits (70), Expect(2) = 2e-07
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLS 60
+R GDPLSP LF L EVLS
Sbjct: 184 IRTGDPLSPYLFLLVSEVLS 203
>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 528
Score = 44.3 bits (103), Expect(2) = 2e-07
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLSR 63
VRQGDPLSPLLFCLAE+VLSR
Sbjct: 319 VRQGDPLSPLLFCLAEDVLSR 339
Score = 36.2 bits (82), Expect(2) = 2e-07
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 78 VQNNYLIPISSPRGALAPLHLMYADDIIIFCRG 176
V+ L + R L P H++YADDI+IFC G
Sbjct: 345 VEQGKLKQMRGTRNCLVPSHILYADDIMIFCNG 377
>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1185
Score = 50.1 bits (118), Expect(2) = 3e-07
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 69 LHGVQNNY-LIPISSPRGALAPLHLMYADDIIIFCRGTKRNLSNILAILDNYGSSSGQIM 245
L G +N L+ I R A HL++ADD +I + K N ++ AILD Y +SGQ +
Sbjct: 473 LQGAENRGDLVGIRVCREAPMISHLLFADDSLILMQADKNNADHLKAILDIYCQNSGQKI 532
Query: 246 NKRKSSMFFGKYTKHKSK 299
++ KSS+FF + T + K
Sbjct: 533 SEAKSSIFFSRNTAVEDK 550
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1
Query: 1 VRQGDPLSPLLFCLAEEVLS 60
+RQGDPLSP LF L E LS
Sbjct: 451 LRQGDPLSPYLFLLVAEGLS 470