BLASTX nr result

ID: Paeonia23_contig00045599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00045599
         (308 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC96788.1| RNA-dependent RNA polymerase-like protein [Southe...   125   5e-27
gb|ABZ10949.1| fusion protein [Southern tomato virus]                 125   5e-27
ref|YP_002321509.1| fusion protein p122 [Southern tomato virus] ...   125   5e-27
gb|ADO14118.1| fusion protein [Blueberry latent virus]                125   6e-27
ref|YP_003934623.1| fusion protein [Blueberry latent virus] gi|2...   125   6e-27
ref|YP_003868436.1| putative fusion protein [Rhododendron virus ...   112   4e-23
gb|AGH15626.1| fusion protein, partial [Southern tomato virus]         69   5e-10

>gb|ABC96788.1| RNA-dependent RNA polymerase-like protein [Southern tomato virus]
          Length = 299

 Score =  125 bits (315), Expect = 5e-27
 Identities = 60/97 (61%), Positives = 77/97 (79%)
 Frame = +3

Query: 18  QATPKCAGDDNLTLFWEDPGDHVLTELRSLLNNWFRAGIEEEDYLIHRPSYAVTTEQAVF 197
           +A PKCAGDDNLT+F +DPGD VL E+R  LN++FRAGI++ED++I RP + V T QAVF
Sbjct: 56  EAVPKCAGDDNLTVFSKDPGDEVLEEMRVKLNDYFRAGIKKEDFIITRPPFHVRTFQAVF 115

Query: 198 PPGTDLSSGTSKLIDKAKWVAFTGKLQINQEEGLSHR 308
             GTDLS GTSK++ KA W  F  +L+I+QE+GLSHR
Sbjct: 116 KEGTDLSKGTSKIMKKAYWREFEDELRIDQEKGLSHR 152


>gb|ABZ10949.1| fusion protein [Southern tomato virus]
          Length = 1062

 Score =  125 bits (315), Expect = 5e-27
 Identities = 60/97 (61%), Positives = 77/97 (79%)
 Frame = +3

Query: 18   QATPKCAGDDNLTLFWEDPGDHVLTELRSLLNNWFRAGIEEEDYLIHRPSYAVTTEQAVF 197
            +A PKCAGDDNLT+F +DPGD VL E+R  LN++FRAGI++ED++I RP + V T QAVF
Sbjct: 713  EAVPKCAGDDNLTVFSKDPGDEVLEEMRVKLNDYFRAGIKKEDFIITRPPFHVRTFQAVF 772

Query: 198  PPGTDLSSGTSKLIDKAKWVAFTGKLQINQEEGLSHR 308
              GTDLS GTSK++ KA W  F  +L+I+QE+GLSHR
Sbjct: 773  KEGTDLSKGTSKIMKKAYWREFEDELRIDQEKGLSHR 809


>ref|YP_002321509.1| fusion protein p122 [Southern tomato virus]
            gi|133711705|gb|ABO36238.1| fusion protein p122 [Southern
            tomato virus]
          Length = 1062

 Score =  125 bits (315), Expect = 5e-27
 Identities = 60/97 (61%), Positives = 77/97 (79%)
 Frame = +3

Query: 18   QATPKCAGDDNLTLFWEDPGDHVLTELRSLLNNWFRAGIEEEDYLIHRPSYAVTTEQAVF 197
            +A PKCAGDDNLT+F +DPGD VL E+R  LN++FRAGI++ED++I RP + V T QAVF
Sbjct: 713  EAVPKCAGDDNLTVFSKDPGDEVLEEMRVKLNDYFRAGIKKEDFIITRPPFHVRTFQAVF 772

Query: 198  PPGTDLSSGTSKLIDKAKWVAFTGKLQINQEEGLSHR 308
              GTDLS GTSK++ KA W  F  +L+I+QE+GLSHR
Sbjct: 773  KEGTDLSKGTSKIMKKAYWREFEDELRIDQEKGLSHR 809


>gb|ADO14118.1| fusion protein [Blueberry latent virus]
          Length = 1054

 Score =  125 bits (314), Expect = 6e-27
 Identities = 60/102 (58%), Positives = 72/102 (70%)
 Frame = +3

Query: 3    GISHLQATPKCAGDDNLTLFWEDPGDHVLTELRSLLNNWFRAGIEEEDYLIHRPSYAVTT 182
            GIS L   PKCAGDDNLT F  D GD     LR  LN  FRA I+EED++IHRP + VT 
Sbjct: 698  GISPLNYVPKCAGDDNLTFFSRDYGDAAFKRLRVKLNEMFRANIDEEDFIIHRPPFFVTK 757

Query: 183  EQAVFPPGTDLSSGTSKLIDKAKWVAFTGKLQINQEEGLSHR 308
             QAVFPPGTDLS GTS ++++ KWV F G++ I++  GLSHR
Sbjct: 758  AQAVFPPGTDLSKGTSSILNQCKWVQFEGEIIIDEAMGLSHR 799


>ref|YP_003934623.1| fusion protein [Blueberry latent virus] gi|269850216|gb|ABO36236.2|
            fusion protein [Blueberry latent virus]
            gi|308097096|gb|ADO14116.1| fusion protein [Blueberry
            latent virus] gi|308097102|gb|ADO14120.1| fusion protein
            [Blueberry latent virus] gi|339895714|dbj|BAK52524.1|
            fusion protein [Blueberry latent virus]
          Length = 1054

 Score =  125 bits (314), Expect = 6e-27
 Identities = 60/102 (58%), Positives = 72/102 (70%)
 Frame = +3

Query: 3    GISHLQATPKCAGDDNLTLFWEDPGDHVLTELRSLLNNWFRAGIEEEDYLIHRPSYAVTT 182
            GIS L   PKCAGDDNLT F  D GD     LR  LN  FRA I+EED++IHRP + VT 
Sbjct: 698  GISPLNYVPKCAGDDNLTFFSRDYGDAAFKRLRVKLNEMFRANIDEEDFIIHRPPFFVTK 757

Query: 183  EQAVFPPGTDLSSGTSKLIDKAKWVAFTGKLQINQEEGLSHR 308
             QAVFPPGTDLS GTS ++++ KWV F G++ I++  GLSHR
Sbjct: 758  AQAVFPPGTDLSKGTSSILNQCKWVQFEGEIIIDEAMGLSHR 799


>ref|YP_003868436.1| putative fusion protein [Rhododendron virus A]
            gi|304557388|gb|ADM36020.1| putative fusion protein
            [Rhododendron virus A]
          Length = 1077

 Score =  112 bits (281), Expect = 4e-23
 Identities = 56/102 (54%), Positives = 69/102 (67%)
 Frame = +3

Query: 3    GISHLQATPKCAGDDNLTLFWEDPGDHVLTELRSLLNNWFRAGIEEEDYLIHRPSYAVTT 182
            GI+    + +CAGDDNLTLFWED  D +L  ++  LNNWFRAGI++ED++I R  Y V  
Sbjct: 721  GIASDLYSSRCAGDDNLTLFWEDQSDGILGLVKQHLNNWFRAGIKDEDFIICRGPYYVER 780

Query: 183  EQAVFPPGTDLSSGTSKLIDKAKWVAFTGKLQINQEEGLSHR 308
             QA FP GTDLS GTS+L+D A WV   G   I+   GLSHR
Sbjct: 781  YQATFPIGTDLSEGTSRLMDSAIWVRLEGGPIIDANRGLSHR 822


>gb|AGH15626.1| fusion protein, partial [Southern tomato virus]
          Length = 257

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/58 (56%), Positives = 44/58 (75%)
 Frame = +3

Query: 135 EEEDYLIHRPSYAVTTEQAVFPPGTDLSSGTSKLIDKAKWVAFTGKLQINQEEGLSHR 308
           ++ED++I RP + V T QAVF  GTDLS GTSK++ KA W  F  +L+I+QE+GLSHR
Sbjct: 1   KKEDFIITRPPFHVRTFQAVFKEGTDLSKGTSKIMKKAYWREFEDELRIDQEKGLSHR 58


Top