BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00040260
         (288 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...    65   7e-09
gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]    65   1e-08
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...    65   1e-08
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...    65   1e-08
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    65   1e-08
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]      62   8e-08
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]        62   1e-07
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...    62   1e-07
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...    61   2e-07
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     61   2e-07
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]    60   2e-07
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    60   3e-07
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...    60   3e-07
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...    60   3e-07
ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ...    60   3e-07
gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus...    60   4e-07
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]      60   4e-07
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    59   5e-07
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     59   9e-07
ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps...    58   1e-06

>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 34/48 (70%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
 Frame = +2

Query: 143 MELEGR-EEDLVVQVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTS 283
           ME EG  +E +V QVSLGGFD +VTAK L +YLE  IGLVWRCRLKTS
Sbjct: 1   METEGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTS 48


>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = +2

Query: 155 GREEDLVVQVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTSS 286
           G  + +V Q+S+GG + YVTAK+L+DYLED +GLVWRCR+KTSS
Sbjct: 5   GDNDMIVTQISIGGLEGYVTAKLLSDYLEDNVGLVWRCRVKTSS 48


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 33/48 (68%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = +2

Query: 143 MELEGR-EEDLVVQVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTS 283
           ME EG  +E +V QVS+GGFD +VTAK L +YL+ AIGLVWRCRLKTS
Sbjct: 1   MEAEGSAKETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTS 48


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 35/49 (71%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTSS 286
           ME EG E+D+VV Q+S+GGFD YVTA  LT YLED IG V RCRLKTSS
Sbjct: 1   MESEGSEKDMVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSS 49


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca
           subsp. vesca]
          Length = 1197

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/48 (72%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTS 283
           MELE RE D VV QVS GGF  +VTAK L  YLED IGLV+RCRLKTS
Sbjct: 1   MELEERENDTVVTQVSFGGFGSHVTAKELVSYLEDEIGLVFRCRLKTS 48


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/49 (63%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTSS 286
           M  EG E+DLVV Q+S+GGFD  V AK+L++YLE+ +G VWRCRLK SS
Sbjct: 1   MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISS 49


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTS 283
           MELEG E+D VV Q+S+GGFD +V AK L D+LE  +G+V+RCRLKTS
Sbjct: 1   MELEGSEKDTVVTQISIGGFDRHVKAKDLMDFLEYEVGIVYRCRLKTS 48


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
 Frame = +2

Query: 143 MELEGR-EEDLVVQVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTS 283
           MELEG  +E +V QVS+GGFD +V A+ L  YLE+ +GLVWRCRLKTS
Sbjct: 1   MELEGSVKETVVTQVSVGGFDRHVKARDLMKYLENEVGLVWRCRLKTS 48


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTSS 286
           M  EG E+DLVV Q+S+GGFD  V AK+L++YLE+ +G VWRCRLK S+
Sbjct: 1   MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISA 49


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTSS 286
           M  EG E+DLVV Q+S+GGFD  V AK+L++YLE+ +G VWRCRLK S+
Sbjct: 1   MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISA 49


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTSS 286
           M  EG E++LVV Q+S+GGFD  V AK+L++YLE+ +G VWRCRLK SS
Sbjct: 1   MGSEGSEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISS 49


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
           tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
           tuberosum]
          Length = 1198

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/49 (63%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTSS 286
           M  EG E+DLVV Q+S+GGF   V AK+L++ LED +G VWRCRLKTSS
Sbjct: 1   MGSEGSEKDLVVTQISVGGFSNDVNAKMLSECLEDQVGQVWRCRLKTSS 49


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +2

Query: 161 EEDLVVQVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTS 283
           ++ +V QVS+GGF    TAK LTDYLED +G+VWRCRLKTS
Sbjct: 8   KKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTS 48


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
           gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
           Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
           AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
           Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
           Full=RNA-directed RNA polymerase 6
           gi|12324444|gb|AAG52184.1|AC012329_11 putative
           RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
           thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
           polymerase-like protein [Arabidopsis thaliana]
           gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
           gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
           6 [Arabidopsis thaliana]
          Length = 1196

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +2

Query: 161 EEDLVVQVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTS 283
           ++ +V QVS+GGF    TAK LTDYLED +G+VWRCRLKTS
Sbjct: 8   KKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTS 48


>ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase
           6 [Arabidopsis lyrata subsp. lyrata]
          Length = 1197

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = +2

Query: 161 EEDLVVQVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTS 283
           +  +V QVS+GGF    TAK LTDYLED +GLVWRCRLKTS
Sbjct: 8   KNSVVTQVSIGGFGESTTAKQLTDYLEDELGLVWRCRLKTS 48


>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
          Length = 1196

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = +2

Query: 164 EDLVVQVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTSS 286
           E +V Q+S+GG    VTAK+L DY ED IGLVWRCRLKTSS
Sbjct: 9   EMIVTQISVGGLGSNVTAKMLLDYFEDNIGLVWRCRLKTSS 49


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTSS 286
           M  EG E++LVV Q+S+GGFD  V AK+L++YLE+ +G VWRCRLK SS
Sbjct: 1   MGSEGCEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISS 49


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571459266|ref|XP_006581359.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTS 283
           M+LEG E+D VV Q+S+GGF   V A  L +YLED IGLV+RCRLKTS
Sbjct: 1   MDLEGSEKDSVVTQISIGGFGSEVKASDLVNYLEDKIGLVYRCRLKTS 48


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = +2

Query: 143 MELEGREEDLVV-QVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTSS 286
           M  EG E++LVV Q+S GGFD  V AK+L++YLE+ +G VWRCRLK SS
Sbjct: 1   MGSEGSEKELVVTQISGGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISS 49


>ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella]
           gi|482559225|gb|EOA23416.1| hypothetical protein
           CARUB_v10016597mg [Capsella rubella]
          Length = 1197

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +2

Query: 170 LVVQVSLGGFDCYVTAKVLTDYLEDAIGLVWRCRLKTS 283
           +V QVS+GGF    TAK LTDYLED +GLVWRCRLK S
Sbjct: 11  VVTQVSIGGFGESTTAKQLTDYLEDEVGLVWRCRLKNS 48