BLASTX nr result

ID: Paeonia23_contig00040199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00040199
         (265 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]    62   1e-07
ref|XP_002309173.2| pentatricopeptide repeat-containing family p...    59   5e-07
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Vitis vinifera]
          Length = 505

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +1

Query: 142 RSPVKSTCNLLRKRRKWPQSPYKAKWHETFNQQEAMRTLK 261
           R P  S  N LRKRRKWP SPYKA WHETF+ ++AM+TLK
Sbjct: 3   RPPSFSKTNFLRKRRKWPLSPYKATWHETFHHRQAMQTLK 42


>emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]
          Length = 390

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +1

Query: 142 RSPVKSTCNLLRKRRKWPQSPYKAKWHETFNQQEAMRTLK 261
           R P  S  N LRKRRKWP SPYKA WHETF+ ++AM+TLK
Sbjct: 5   RPPSFSKTNFLRKRRKWPLSPYKATWHETFHHRQAMQTLK 44


>ref|XP_002309173.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550335936|gb|EEE92696.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 490

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +1

Query: 154 KSTCNLLRKRRKWPQSPYKAKWHETFNQQEAMRTLKQ 264
           KS    LRK RKWP SPYKA+WH  FNQQ+AM++LKQ
Sbjct: 8   KSASFFLRKHRKWPYSPYKARWHRIFNQQQAMQSLKQ 44


>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
           gi|449483740|ref|XP_004156675.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
          Length = 491

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = +1

Query: 145 SPVKSTCNLLRKRRKWPQSPYKAKWHETFNQQEAMRTLKQ 264
           S VK + N LRK RKWP S +K KWH+TF+Q EA+R LKQ
Sbjct: 6   SVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQ 45


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