BLASTX nr result

ID: Paeonia23_contig00039818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00039818
         (634 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...    46   6e-06
ref|XP_007023825.1| Uncharacterized protein TCM_028091 [Theobrom...    51   9e-06

>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
           thaliana]
          Length = 1253

 Score = 46.2 bits (108), Expect(2) = 6e-06
 Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
 Frame = +3

Query: 219 ARKLDKVLCNE*LLNSMENVEVIVHPRCVSDH*P--LVLVPCMQKLPRVKMFRYLYFCDS 392
           A+KLD++L NE   +   +   +      SDH    +++ P M +  R   FR+  F   
Sbjct: 149 AKKLDRILVNESWCSRFPSAYAVFGEPDFSDHASCGVIINPLMHREKRP--FRFYNFLLQ 206

Query: 393 HQDFLSMVNKIW-QV*IHGTPMFVLCQNLKIMIQR*RIFNREHFNQL 530
           + DF+S+V ++W  + + G+ MF + + LK +    R F+ E+F+ L
Sbjct: 207 NPDFISLVGELWYSINVVGSSMFKMSKKLKALKNPIRTFSMENFSNL 253



 Score = 30.0 bits (66), Expect(2) = 6e-06
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +1

Query: 55  WLVMRNFN-ITRTIEEKSLTSRSIAFTMNQFNDYLFDCDFVDLV-KGN 192
           W+++ +FN +    E    TS ++   M  F D LF+ +  DLV KGN
Sbjct: 88  WIMLGDFNQVLCPAEHSQATSLNVNRRMKVFRDCLFEAELCDLVFKGN 135


>ref|XP_007023825.1| Uncharacterized protein TCM_028091 [Theobroma cacao]
           gi|508779191|gb|EOY26447.1| Uncharacterized protein
           TCM_028091 [Theobroma cacao]
          Length = 208

 Score = 50.8 bits (120), Expect(2) = 9e-06
 Identities = 28/103 (27%), Positives = 52/103 (50%)
 Frame = +3

Query: 222 RKLDKVLCNE*LLNSMENVEVIVHPRCVSDH*PLVLVPCMQKLPRVKMFRYLYFCDSHQD 401
           ++LD+V+CN        ++ V    R  SDH PL++      + R   FR+L+    H D
Sbjct: 93  QRLDRVVCNMQWGMHFTSIRVQHFYRDGSDHCPLLIFSIESSVKRSSSFRFLHAWLKHHD 152

Query: 402 FLSMVNKIWQV*IHGTPMFVLCQNLKIMIQR*RIFNREHFNQL 530
           F+S V++ W   IHGT + +     + + +  +++N+  F  +
Sbjct: 153 FMSFVDRNWNEPIHGTELMIFWLKQERLKKALKVWNKAIFGDI 195



 Score = 25.0 bits (53), Expect(2) = 9e-06
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
 Frame = +1

Query: 19  RVALWDFYTT------NTWLVMRNFNITRTIEEKSLTSRSIAFTMNQFNDYLFDCDFVD 177
           R  LW F          +WL    FNI     E+ L ++S   +M      LFDC  +D
Sbjct: 18  RQDLWAFLRNIVPGIHESWLAGGAFNIIINKVERFLGAKSHIGSMEDLALTLFDCGLLD 76


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