BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00039554
         (365 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   112   7e-23
emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera]   110   3e-22
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]   109   5e-22
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   108   6e-22
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   108   1e-21
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...   107   2e-21
emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]        106   3e-21
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        106   4e-21
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot...   105   7e-21
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...   104   1e-20
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     103   2e-20
emb|CAN72238.1| hypothetical protein VITISV_010775 [Vitis vinifera]   103   2e-20
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop...   103   2e-20
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...   103   2e-20
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   103   3e-20
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   103   3e-20
dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Ar...   101   1e-19
gb|AAC28238.1| contains similarity to reverse trancriptase (Pfam...   101   1e-19
emb|CAN65716.1| hypothetical protein VITISV_015039 [Vitis vinifera]   100   2e-19
emb|CAA31653.1| polyprotein [Arabidopsis thaliana]                     99   5e-19

>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/87 (58%), Positives = 65/87 (74%)
 Frame = +3

Query: 9    QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
            QW++A+ EE+ SL KN+TW+L+ KPK  K+VG KWVFK+K GT G E  RY ARLVAKGF
Sbjct: 785  QWVKAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGF 844

Query: 189  T*REGIDYNEVFSPASKQKFIRVCRDF 269
            + +EG+DYNE+FSP  K   IR+   F
Sbjct: 845  SQKEGVDYNEIFSPVVKHSSIRLLLAF 871


>emb|CAN74382.1| hypothetical protein VITISV_007945 [Vitis vinifera]
          Length = 444

 Score =  110 bits (274), Expect = 3e-22
 Identities = 53/85 (62%), Positives = 65/85 (76%)
 Frame = +3

Query: 3   STQWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAK 182
           S +W+ AM EE +SL +N T  L++KPKG K+VGCKWVFKKK G PGVE  R+ ARLVAK
Sbjct: 203 SPKWMNAMQEEFESLFQNGTRLLVDKPKGCKVVGCKWVFKKKLGIPGVEPERFKARLVAK 262

Query: 183 GFT*REGIDYNEVFSPASKQKFIRV 257
           G+T REG+D+NE+FSPA K   I V
Sbjct: 263 GYTQREGVDFNEIFSPAVKHTSIGV 287


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score =  109 bits (272), Expect = 5e-22
 Identities = 52/85 (61%), Positives = 64/85 (75%)
 Frame = +3

Query: 3   STQWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAK 182
           S +W+ AM EE +SL KN TW+L++KPKG K+VGCKWVFKKK G P VE  R+ A LVAK
Sbjct: 470 SPKWMTAMQEEFESLLKNGTWQLVDKPKGCKVVGCKWVFKKKLGIPHVEPERFKATLVAK 529

Query: 183 GFT*REGIDYNEVFSPASKQKFIRV 257
            +T REG+D+NE+FSP  K   IRV
Sbjct: 530 AYTQREGMDFNEIFSPMVKHTSIRV 554


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  108 bits (271), Expect = 6e-22
 Identities = 48/85 (56%), Positives = 62/85 (72%)
 Frame = +3

Query: 3    STQWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAK 182
            S +W  AM +E++SLHKNQTW L+ +P G KI+ CKWVFKKK+G    E  +Y AR+VA+
Sbjct: 803  SEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVAR 862

Query: 183  GFT*REGIDYNEVFSPASKQKFIRV 257
            GF  REG+DYNE+FSP  +   IRV
Sbjct: 863  GFNQREGVDYNEIFSPVVRHTSIRV 887


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  108 bits (269), Expect = 1e-21
 Identities = 48/82 (58%), Positives = 62/82 (75%)
 Frame = +3

Query: 9    QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
            +W +A  EE+ S+ KN TW +I+KP+G +++GCKW+FK+K G PGVE  RY ARLVAKGF
Sbjct: 837  KWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGF 896

Query: 189  T*REGIDYNEVFSPASKQKFIR 254
            + REGIDY E+FSP  K   IR
Sbjct: 897  SQREGIDYQEIFSPVVKHVSIR 918


>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
           retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
           reverse transcriptase [Arabidopsis thaliana]
          Length = 587

 Score =  107 bits (266), Expect = 2e-21
 Identities = 48/83 (57%), Positives = 61/83 (73%)
 Frame = +3

Query: 9   QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
           +W  A  EE+ SL KN TW L++KP+  KI+GC+W+FK K G PGVE  RY ARLVAKG+
Sbjct: 84  KWKLATHEEMDSLIKNGTWVLVDKPQDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGY 143

Query: 189 T*REGIDYNEVFSPASKQKFIRV 257
           T REG+DY E+F+P  K  FIR+
Sbjct: 144 TQREGVDYQEIFAPVVKHTFIRI 166


>emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]
          Length = 494

 Score =  106 bits (265), Expect = 3e-21
 Identities = 48/83 (57%), Positives = 61/83 (73%)
 Frame = +3

Query: 9   QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
           +W  A  EE+ SL KN TW L++KPK  KI+GC+W+FK K G PGVE  RY ARLVAKG+
Sbjct: 85  KWKLATHEEMDSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGY 144

Query: 189 T*REGIDYNEVFSPASKQKFIRV 257
           T REG+DY E+F+P +K   IR+
Sbjct: 145 TQREGVDYQEIFAPVAKHTSIRI 167


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  106 bits (264), Expect = 4e-21
 Identities = 44/83 (53%), Positives = 62/83 (74%)
 Frame = +3

Query: 9    QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
            +W+EAM +E++SL +NQTW LI  P   +++ CKW+FK+ +G P VE  +Y ARLVA+GF
Sbjct: 828  KWLEAMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFKRNEGIPDVEPPKYKARLVARGF 887

Query: 189  T*REGIDYNEVFSPASKQKFIRV 257
            T REG+D+NE+FSP  K   IR+
Sbjct: 888  TQREGVDFNEIFSPVVKHSSIRI 910


>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
            (strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
            unnamed protein product [Arabidopsis thaliana]
          Length = 1084

 Score =  105 bits (262), Expect = 7e-21
 Identities = 48/83 (57%), Positives = 60/83 (72%)
 Frame = +3

Query: 9    QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
            +W  A  EE  SL KN TW L++KPK  KI+GC+W+FK K G PGVE  RY ARLVAKG+
Sbjct: 760  KWKLATHEEKNSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGY 819

Query: 189  T*REGIDYNEVFSPASKQKFIRV 257
            T REG+DY E+F+P +K   IR+
Sbjct: 820  TQREGVDYQEIFAPVAKHTSIRI 842


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score =  104 bits (259), Expect = 1e-20
 Identities = 47/82 (57%), Positives = 60/82 (73%)
 Frame = +3

Query: 9    QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
            +W  AM EE+ S+ KN TW L+ KP+  K++GC+WVF +K G PGVE  R+ ARLVAKGF
Sbjct: 830  KWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGF 889

Query: 189  T*REGIDYNEVFSPASKQKFIR 254
            T +EG+DYNE+FSP  K   IR
Sbjct: 890  TQKEGVDYNEIFSPVVKHVSIR 911


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/85 (55%), Positives = 63/85 (74%)
 Frame = +3

Query: 3    STQWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAK 182
            S  WI AM+EE++SLHKN  W+L+ KPK  K+VGCKWVF+KK+G    +   Y ARLVAK
Sbjct: 794  SAGWIGAMTEEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAK 853

Query: 183  GFT*REGIDYNEVFSPASKQKFIRV 257
            G++ +EG+DY+E+FSP  K   IR+
Sbjct: 854  GYSQKEGVDYDEIFSPVVKHTSIRL 878


>emb|CAN72238.1| hypothetical protein VITISV_010775 [Vitis vinifera]
          Length = 807

 Score =  103 bits (258), Expect = 2e-20
 Identities = 46/83 (55%), Positives = 62/83 (74%)
 Frame = +3

Query: 9   QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
           QW++++ E++ SL KN+TW+L+ KPK  K+ G KWVFK+K GT G E  RY ARLVAKGF
Sbjct: 545 QWVKSIQEKMDSLRKNETWELVTKPKDRKLAGSKWVFKRKQGTLGEEAPRYKARLVAKGF 604

Query: 189 T*REGIDYNEVFSPASKQKFIRV 257
           + +EG+ YNE+FSP  K   IR+
Sbjct: 605 SQKEGVVYNEIFSPVVKNSSIRL 627


>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1166

 Score =  103 bits (257), Expect = 2e-20
 Identities = 50/83 (60%), Positives = 59/83 (71%)
 Frame = +3

Query: 9   QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
           QW  AM EE+ S  K+ TW LI KP+  K++GCKW+FK K G PGVE  RY ARLVAKGF
Sbjct: 747 QWENAMKEEMDSHKKSHTWDLIEKPEKQKLIGCKWIFKLKPGIPGVEKQRYKARLVAKGF 806

Query: 189 T*REGIDYNEVFSPASKQKFIRV 257
           + +EGIDYNEVFS   K   IR+
Sbjct: 807 SQQEGIDYNEVFSLVVKHVSIRL 829


>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score =  103 bits (257), Expect = 2e-20
 Identities = 47/83 (56%), Positives = 59/83 (71%)
 Frame = +3

Query: 9   QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
           +W  A  EE+ SL KN TW L++KP   KI+GC+W+FK K G PGVE  R+ ARLVAKG+
Sbjct: 531 KWKNATHEEMDSLIKNGTWDLVDKPTNRKIIGCRWLFKLKSGIPGVEPVRFKARLVAKGY 590

Query: 189 T*REGIDYNEVFSPASKQKFIRV 257
           T REG+DY E+F+P  K   IRV
Sbjct: 591 TQREGVDYQEIFAPVVKHTSIRV 613


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  103 bits (256), Expect = 3e-20
 Identities = 46/83 (55%), Positives = 60/83 (72%)
 Frame = +3

Query: 9    QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
            +W  A  +E+ SL KN TW L++KPK  KI+GC+W+FK K G PGVE  R+ ARLVAKG+
Sbjct: 853  KWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGY 912

Query: 189  T*REGIDYNEVFSPASKQKFIRV 257
            T REG+DY E+F+P  K   IR+
Sbjct: 913  TQREGVDYQEIFAPVVKHVSIRI 935


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/85 (57%), Positives = 62/85 (72%)
 Frame = +3

Query: 3    STQWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAK 182
            S +W+ +M +E+ SL KNQTW+L+  P+G K V CKW+FK KDG    E  +Y +RLVAK
Sbjct: 926  SKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAK 985

Query: 183  GFT*REGIDYNEVFSPASKQKFIRV 257
            GF+ +EGIDYNEVFSP  K K IRV
Sbjct: 986  GFSQKEGIDYNEVFSPVVKHKSIRV 1010


>dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 348

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 9   QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
           QW  AM EE+ S  K+ TW LI KP+  K++GCKW+FK K G PG+E  RY  RLVAKGF
Sbjct: 219 QWESAMKEEMDSHQKSHTWDLIEKPEKQKLIGCKWIFKLKPGIPGLEKQRYKVRLVAKGF 278

Query: 189 T*REGIDYNEVFSPASKQKFIRV 257
           + +EGIDYNEVFS   K   IR+
Sbjct: 279 SQQEGIDYNEVFSLVVKHVSIRL 301


>gb|AAC28238.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
           19.54) and CCHC-type zinc fingers (Pfam: zf-CCHC.hmm,
           score: 12.35) [Arabidopsis thaliana]
           gi|7267184|emb|CAB77896.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 1104

 Score =  101 bits (251), Expect = 1e-19
 Identities = 47/83 (56%), Positives = 59/83 (71%)
 Frame = +3

Query: 9   QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
           +W   M EE+ SL KN TW +++KPK  K++ C W++KKK G PGVE  RY ARLVA+GF
Sbjct: 689 KWHGGMIEEMDSLLKNATWDIVDKPKNQKVISCHWLYKKKLGIPGVELPRYKARLVARGF 748

Query: 189 T*REGIDYNEVFSPASKQKFIRV 257
           + REGIDY EVFSP  K   IR+
Sbjct: 749 SHREGIDYQEVFSPVVKHTSIRI 771


>emb|CAN65716.1| hypothetical protein VITISV_015039 [Vitis vinifera]
          Length = 829

 Score =  100 bits (249), Expect = 2e-19
 Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 12/128 (9%)
 Frame = +3

Query: 9   QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
           +W++AM EE+++L KN+TW L+N PKG KIVGCKWVF  K    G  + RY ARLVAKGF
Sbjct: 357 RWVQAMKEEMEALLKNKTWILVNLPKGQKIVGCKWVFSIKYKVDGTIE-RYKARLVAKGF 415

Query: 189 T*REGIDYNEVFSPASKQKFIRVCRDFNNPKLIVVKHNTTHQAI------------NGFL 332
           T   G+DY E FSP +K   +RV   F N  L    H    + I             G +
Sbjct: 416 TQTYGVDYQETFSPVAKLNTVRVLLSFANAFL----HGDLEEDIYMDIPSRYVANTKGNI 471

Query: 333 VCKIQDLI 356
           VCK+Q  +
Sbjct: 472 VCKLQSTL 479


>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
          Length = 1291

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 45/83 (54%), Positives = 60/83 (72%)
 Frame = +3

Query: 9    QWIEAMSEEIKSLHKNQTWKLINKPKGHKIVGCKWVFKKKDGTPGVEDARY*ARLVAKGF 188
            +W  A  EE+ SL KN TW L++KP+  KI+GC+W+FK K G+PGVE  RY A+LVAKG+
Sbjct: 860  KWKLATHEEMDSLIKNGTWVLVDKPQNRKIIGCRWLFKLKSGSPGVEPVRYKAQLVAKGY 919

Query: 189  T*REGIDYNEVFSPASKQKFIRV 257
            T REG+DY E+F+   K   IR+
Sbjct: 920  THREGVDYQEIFALVVKHTSIRI 942