BLASTX nr result

ID: Paeonia23_contig00039483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00039483
         (304 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004295686.1| PREDICTED: uncharacterized mitochondrial pro...    92   1e-19
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               89   5e-19
gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc...    90   2e-17
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...    87   2e-17
gb|ABJ96383.1| hypothetical protein [Prunus persica]                   91   6e-17
emb|CAR66103.1| RT-RNaseH [Triticum turgidum subsp. durum]             87   8e-17
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...    91   1e-16
emb|CAN59941.1| hypothetical protein VITISV_017227 [Vitis vinifera]    91   1e-16
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]    86   1e-16
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]         86   1e-16
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]            86   1e-16
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]    85   2e-16
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]    85   2e-16
emb|CAN64170.1| hypothetical protein VITISV_029600 [Vitis vinifera]    87   2e-16
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]    85   2e-16
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...    85   2e-16
emb|CAN76078.1| hypothetical protein VITISV_008973 [Vitis vinifera]    84   4e-16
emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera]    82   4e-16
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    85   5e-16
gb|AAB82754.1| retrofit [Oryza longistaminata]                         83   1e-15

>ref|XP_004295686.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Fragaria vesca subsp. vesca]
          Length = 261

 Score = 92.0 bits (227), Expect(2) = 1e-19
 Identities = 44/80 (55%), Positives = 54/80 (67%)
 Frame = -1

Query: 304 RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
           R STGGY VYL  N I WS K  R VS S  EAEYRQLA+T  E+ W+R++F DL + + 
Sbjct: 150 RQSTGGYCVYLGPNLISWSYKTHRTVSRSCAEAEYRQLAFTAAEISWLRSMFCDLSLFLQ 209

Query: 124 APA*WCDNISSTALASNPFF 65
            P  WCD +S+ A+ASNP F
Sbjct: 210 CPRIWCDYLSAIAIASNPVF 229



 Score = 30.0 bits (66), Expect(2) = 1e-19
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 72  LFSCPHQTLEVDYHYIHEKVIRKE 1
           +F    + +EVDYHY  EKV+ KE
Sbjct: 228 VFHARTKHVEVDYHYFREKVVNKE 251


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 89.4 bits (220), Expect(2) = 5e-19
 Identities = 46/80 (57%), Positives = 55/80 (68%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
            RHSTGG+           SSKK + VS SS EAEYRQLAYT  E+ W+R+LF+DL + +S
Sbjct: 1240 RHSTGGFC----------SSKKHKTVSRSSAEAEYRQLAYTAAELSWLRSLFRDLNVFLS 1289

Query: 124  APA*WCDNISSTALASNPFF 65
             P  WCDNISS +LASNP F
Sbjct: 1290 CPRIWCDNISSISLASNPVF 1309



 Score = 30.4 bits (67), Expect(2) = 5e-19
 Identities = 10/16 (62%), Positives = 15/16 (93%)
 Frame = -2

Query: 48   LEVDYHYIHEKVIRKE 1
            +EVDYHY+ +KV+R+E
Sbjct: 1316 IEVDYHYVRDKVVRQE 1331


>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1762

 Score = 89.7 bits (221), Expect(2) = 2e-17
 Identities = 39/81 (48%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGV- 128
            R STGG+V+Y   N + WS++K R VS SSTEAEY+ +A  T E++W+R++ ++LG+ + 
Sbjct: 1623 RRSTGGFVIYFGPNLVSWSARKQRTVSRSSTEAEYKAMANATAELIWVRSVLEELGVKID 1682

Query: 127  SAPA*WCDNISSTALASNPFF 65
             +P  WCDN+ +T L+SNP F
Sbjct: 1683 QSPVLWCDNLGATYLSSNPVF 1703



 Score = 25.0 bits (53), Expect(2) = 2e-17
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 72   LFSCPHQTLEVDYHYIHEKVIRK 4
            +F    + +E+DYH++ E+V  K
Sbjct: 1702 VFHARTKHIEIDYHFVQERVANK 1724


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score = 86.7 bits (213), Expect(2) = 2e-17
 Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
            R STGG+ V+L SN + WS++K   VS SSTEAEY+ +A  T EV+W++AL K+LGI   
Sbjct: 1935 RRSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYKAVANATAEVMWVQALLKELGINSP 1994

Query: 124  APA-*WCDNISSTALASNPFF 65
              A  WCDN+ +T LA NP F
Sbjct: 1995 ETACMWCDNLGATYLAVNPVF 2015



 Score = 27.7 bits (60), Expect(2) = 2e-17
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -2

Query: 72   LFSCPHQTLEVDYHYIHEKVIRKE 1
            +F    + +E+DYH++ E+V RK+
Sbjct: 2014 VFHARTKHIEIDYHFVRERVARKQ 2037


>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score = 90.9 bits (224), Expect(2) = 6e-17
 Identities = 41/81 (50%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304 RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
           R STGG+ +YL  N + WS+KK   V+ SSTEAEYR +A T+TE+ W+R+L ++LG   S
Sbjct: 52  RRSTGGFAIYLGCNLVSWSAKKQHTVARSSTEAEYRAIANTSTEITWLRSLLQELGFSTS 111

Query: 124 -APA*WCDNISSTALASNPFF 65
            +P  WCDN+ +T L++NP F
Sbjct: 112 TSPVLWCDNLGATYLSANPIF 132



 Score = 21.9 bits (45), Expect(2) = 6e-17
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -2

Query: 72  LFSCPHQTLEVDYHYIHEKV 13
           +F    + +E+DYH++ ++V
Sbjct: 131 IFHARTKHVEIDYHFVRDQV 150


>emb|CAR66103.1| RT-RNaseH [Triticum turgidum subsp. durum]
          Length = 420

 Score = 87.0 bits (214), Expect(2) = 8e-17
 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
 Frame = -1

Query: 304 RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGI-GV 128
           R STGG+ V+L SN + WS++K   VS SSTEAEY+ LA  T EV+WI+ L  +LGI   
Sbjct: 271 RRSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYKALANATAEVMWIQTLLYELGIKAP 330

Query: 127 SAPA*WCDNISSTALASNPFFMP 59
            A   WCDNI +T L++NP F P
Sbjct: 331 QAARLWCDNIGATYLSANPVFHP 353



 Score = 25.4 bits (54), Expect(2) = 8e-17
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -2

Query: 48  LEVDYHYIHEKVIRK 4
           +EVD+H++ E+V RK
Sbjct: 368 IEVDFHFVRERVARK 382


>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score = 90.9 bits (224), Expect(2) = 1e-16
 Identities = 48/81 (59%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304 RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIG-V 128
           R S  GY VYL SN + WSSKK  +VS SSTEAEYR LA  T EV WI++L K+L I  V
Sbjct: 692 RKSVAGYAVYLGSNLVSWSSKKQAVVSRSSTEAEYRALAQATAEVTWIQSLLKELHIHLV 751

Query: 127 SAPA*WCDNISSTALASNPFF 65
           +AP  WCDN S+ ALA NP +
Sbjct: 752 TAPIMWCDNQSAIALAHNPVY 772



 Score = 21.2 bits (43), Expect(2) = 1e-16
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 48  LEVDYHYIHEKVIRKE 1
           +E+D H+I +KV  K+
Sbjct: 779 VELDIHFIRDKVTAKQ 794


>emb|CAN59941.1| hypothetical protein VITISV_017227 [Vitis vinifera]
          Length = 479

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304 RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIG-V 128
           R ST GY V+L +N + WSS+K  +V+ SSTEAEYR LA+ +TEV W+R+LF +LGI  V
Sbjct: 392 RRSTTGYCVFLGTNLLTWSSRKLPVVARSSTEAEYRVLAHASTEVAWLRSLFSELGISLV 451

Query: 127 SAPA*WCDNISSTALASNPFF 65
           + P  WCDN  + ALA+NP F
Sbjct: 452 NTPILWCDNQGAGALAANPVF 472


>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
          Length = 1394

 Score = 85.5 bits (210), Expect(2) = 1e-16
 Identities = 42/80 (52%), Positives = 54/80 (67%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
            R ST GY V+L SN I WSS K R+VS SS E+EYR L   T E++WI++L ++L +  S
Sbjct: 1121 RRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPTS 1180

Query: 124  APA*WCDNISSTALASNPFF 65
             P  WCDN S+  LA+NP F
Sbjct: 1181 PPVLWCDNQSAAHLAANPVF 1200



 Score = 26.2 bits (56), Expect(2) = 1e-16
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 72   LFSCPHQTLEVDYHYIHEKVIRKE 1
            +F    + +E+D H+I EKV+R+E
Sbjct: 1199 VFHSRSKHIELDLHFIREKVLRQE 1222


>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
          Length = 1131

 Score = 85.5 bits (210), Expect(2) = 1e-16
 Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIG-V 128
            R STGG+ ++L  N I WS++K   VS SSTEAEY+ LA  T EV+WI+ L K+LG+   
Sbjct: 776  RRSTGGFAIFLGFNLISWSARKQATVSRSSTEAEYKALANATAEVIWIQTLLKELGVSQP 835

Query: 127  SAPA*WCDNISSTALASNPFF 65
             A   WCDNI +T L++NP F
Sbjct: 836  KAAVLWCDNIGATYLSANPVF 856



 Score = 26.2 bits (56), Expect(2) = 1e-16
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 72  LFSCPHQTLEVDYHYIHEKVIRK 4
           +F    + +EVDYH++ E+V+++
Sbjct: 855 VFHARTKHIEVDYHFVRERVVQR 877


>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
          Length = 1087

 Score = 85.5 bits (210), Expect(2) = 1e-16
 Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIG-V 128
            R STGG+ ++L  N I WS++K   VS SSTEAEY+ LA  T EV+WI+ L K+LG+   
Sbjct: 942  RRSTGGFAIFLGFNLISWSARKQATVSRSSTEAEYKALANATAEVIWIQTLLKELGVSQP 1001

Query: 127  SAPA*WCDNISSTALASNPFF 65
             A   WCDNI +T L++NP F
Sbjct: 1002 KAAVLWCDNIGATYLSANPVF 1022



 Score = 26.2 bits (56), Expect(2) = 1e-16
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 72   LFSCPHQTLEVDYHYIHEKVIRK 4
            +F    + +EVDYH++ E+V+++
Sbjct: 1021 VFHARTKHIEVDYHFVRERVVQR 1043


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score = 85.1 bits (209), Expect(2) = 2e-16
 Identities = 42/80 (52%), Positives = 54/80 (67%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
            R ST GY V+L SN I WSS K R+VS SS E+EYR L   T E++WI++L ++L +  S
Sbjct: 1226 RRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPTS 1285

Query: 124  APA*WCDNISSTALASNPFF 65
             P  WCDN S+  LA+NP F
Sbjct: 1286 PPILWCDNQSAAHLAANPVF 1305



 Score = 26.2 bits (56), Expect(2) = 2e-16
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 72   LFSCPHQTLEVDYHYIHEKVIRKE 1
            +F    + +E+D H+I EKV+R+E
Sbjct: 1304 VFHSRSKHIELDLHFIREKVLRQE 1327


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score = 85.1 bits (209), Expect(2) = 2e-16
 Identities = 42/80 (52%), Positives = 54/80 (67%)
 Frame = -1

Query: 304 RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
           R ST GY V+L SN I WSS K R+VS SS E+EYR L   T E++WI++L ++L +  S
Sbjct: 573 RRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPTS 632

Query: 124 APA*WCDNISSTALASNPFF 65
            P  WCDN S+  LA+NP F
Sbjct: 633 PPILWCDNQSAAHLAANPVF 652



 Score = 26.2 bits (56), Expect(2) = 2e-16
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 72  LFSCPHQTLEVDYHYIHEKVIRKE 1
           +F    + +E+D H+I EKV+R+E
Sbjct: 651 VFHSRSKHIELDLHFIREKVLRQE 674


>emb|CAN64170.1| hypothetical protein VITISV_029600 [Vitis vinifera]
          Length = 328

 Score = 87.4 bits (215), Expect(2) = 2e-16
 Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = -1

Query: 298 STGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIG-VSA 122
           ST GY V+L +N + WSS+K  +V+ SSTE EYR LA+ +TEV W+R++F +LGI  V+ 
Sbjct: 149 STTGYCVFLGTNLLTWSSRKQSMVARSSTEVEYRALAHASTEVAWLRSIFSELGISLVNT 208

Query: 121 PA*WCDNISSTALASNPFF 65
           P  WCDN  + ALA+NP F
Sbjct: 209 PVIWCDNQGAGALAANPVF 227



 Score = 23.9 bits (50), Expect(2) = 2e-16
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 48  LEVDYHYIHEKVIRKE 1
           +EVD HY+ E+V+ K+
Sbjct: 234 IEVDVHYVQEQVLDKK 249


>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
          Length = 1272

 Score = 84.7 bits (208), Expect(2) = 2e-16
 Identities = 42/80 (52%), Positives = 54/80 (67%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
            R ST GY V+L SN I WSS K R+VS SS E+EYR L   T E++WI++L ++L +  S
Sbjct: 1095 RRSTSGYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPTS 1154

Query: 124  APA*WCDNISSTALASNPFF 65
             P  WCDN S+  LA+NP F
Sbjct: 1155 PPILWCDNQSAXHLAANPVF 1174



 Score = 26.2 bits (56), Expect(2) = 2e-16
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 72   LFSCPHQTLEVDYHYIHEKVIRKE 1
            +F    + +E+D H+I EKV+R+E
Sbjct: 1173 VFHSRSKHIELDLHFIREKVLRQE 1196


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score = 85.1 bits (209), Expect(2) = 2e-16
 Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
            + STGG+ V+L SN I W+++K   VS SSTEAEY+ LA  T E++W+R L ++LGI   
Sbjct: 912  KRSTGGFAVFLGSNLISWNARKQATVSRSSTEAEYKALANATAEIMWVRKLLEELGISHP 971

Query: 124  APA-*WCDNISSTALASNPFF 65
             P+  WCDNI +T L+ NP F
Sbjct: 972  GPSQLWCDNIGATYLSVNPVF 992



 Score = 25.8 bits (55), Expect(2) = 2e-16
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = -2

Query: 72   LFSCPHQTLEVDYHYIHEKVIRKE 1
            +F    + +E+DYH++ E+V +K+
Sbjct: 991  VFHARTKHIEIDYHFVREQVAQKQ 1014


>emb|CAN76078.1| hypothetical protein VITISV_008973 [Vitis vinifera]
          Length = 1146

 Score = 84.0 bits (206), Expect(2) = 4e-16
 Identities = 41/80 (51%), Positives = 55/80 (68%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
            R ST GY V+L+SN I WSS K R+VS SST +EYR L   T E++WI++L ++L +  S
Sbjct: 1001 RRSTNGYCVFLASNLISWSSSKQRLVSKSSTVSEYRGLVSLTAELVWIQSLLQELCLPTS 1060

Query: 124  APA*WCDNISSTALASNPFF 65
             P  WCDN S+  +A+NP F
Sbjct: 1061 PPILWCDNQSTAHIAANPVF 1080



 Score = 26.2 bits (56), Expect(2) = 4e-16
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 72   LFSCPHQTLEVDYHYIHEKVIRKE 1
            +F    + +E+D H+I EKV+R+E
Sbjct: 1079 VFHSRSKHIELDLHFIREKVLRQE 1102


>emb|CAN81140.1| hypothetical protein VITISV_007978 [Vitis vinifera]
          Length = 791

 Score = 82.0 bits (201), Expect(2) = 4e-16
 Identities = 45/81 (55%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304 RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGV- 128
           R S  GY V++  N I WS+KK  +VS SS EAEYR LA  T EV W+R L  +L I + 
Sbjct: 632 RRSMCGYGVFVGPNLISWSAKKQPVVSKSSIEAEYRCLALVTAEVYWLRMLLCELEISLD 691

Query: 127 SAPA*WCDNISSTALASNPFF 65
           S P  WCDNIS+ ALASNP F
Sbjct: 692 SPPVIWCDNISALALASNPIF 712



 Score = 28.1 bits (61), Expect(2) = 4e-16
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -2

Query: 72  LFSCPHQTLEVDYHYIHEKVIRKE 1
           +F    + ++VDYH++HEKV  ++
Sbjct: 711 IFHARSKHIKVDYHFVHEKVAHQD 734


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 84.7 bits (208), Expect(2) = 5e-16
 Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGIGVS 125
            R STGGY ++L  N I W+SKK   VS SSTEAEY+ +A  T EV+W+++L  +LGI ++
Sbjct: 1294 RKSTGGYALFLGPNLISWNSKKQSTVSRSSTEAEYKAMANATAEVIWLQSLLHELGIRLT 1353

Query: 124  A-PA*WCDNISSTALASNPFF 65
              P  WCDN+ +T L+S P F
Sbjct: 1354 GIPRLWCDNLGATYLSSKPIF 1374



 Score = 25.0 bits (53), Expect(2) = 5e-16
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = -2

Query: 72   LFSCPHQTLEVDYHYIHEKVIRKE 1
            +F+   + +EVD+H++ ++V+ K+
Sbjct: 1373 IFNARTKHIEVDFHFVRDRVLSKK 1396


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 83.2 bits (204), Expect(2) = 1e-15
 Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -1

Query: 304  RHSTGGYVVYLSSNPILWSSKK*RIVSCSSTEAEYRQLAYTTTEVLWIRALFKDLGI-GV 128
            R STGG+ V+L SN + WS++K   VS SSTEAEY+ +A TT E++W++ L K+LGI   
Sbjct: 1306 RKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESP 1365

Query: 127  SAPA*WCDNISSTALASNPFF 65
             A   WCDN+ +  L++NP F
Sbjct: 1366 KAAKIWCDNLGAKYLSANPVF 1386



 Score = 25.4 bits (54), Expect(2) = 1e-15
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 72   LFSCPHQTLEVDYHYIHEKVIRK 4
            +F    + +EVDYH++ E+V +K
Sbjct: 1385 VFHARTKHIEVDYHFVRERVSQK 1407


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