BLASTX nr result
ID: Paeonia23_contig00039383
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00039383
(312 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38766.2| Polyprotein, putative [Solanum demissum] 133 2e-32
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 130 2e-31
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] 130 1e-30
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 132 2e-30
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 130 7e-30
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera] 121 4e-27
gb|AAP03376.1| putative gag-pol polyprotein [Oryza sativa Japoni... 122 7e-27
gb|AAX96359.1| retrotransposon protein, putative, Ty1-copia sub-... 120 2e-26
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc... 119 3e-26
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc... 119 3e-26
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa... 119 3e-26
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo... 119 3e-26
emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group] 119 3e-26
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc... 119 3e-26
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc... 119 3e-26
gb|ABB47787.2| retrotransposon protein, putative, Ty1-copia subc... 119 3e-26
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc... 119 3e-26
gb|AAL31045.1|AC078893_8 putative polyprotein [Oryza sativa Japo... 119 3e-26
dbj|BAB03249.1| polyprotein [Oryza sativa] 119 3e-26
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc... 119 4e-26
>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 133 bits (334), Expect(2) = 2e-32
Identities = 63/89 (70%), Positives = 75/89 (84%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEYDSPF 225
KKYFITFIDDCT +CYVYLL+SKDEAI+ F +YK EVENQLN KIKM+R RG EY+S F
Sbjct: 554 KKYFITFIDDCTRFCYVYLLNSKDEAIDAFKQYKNEVENQLNLKIKMIRSDRGGEYESLF 613
Query: 226 AKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
A++C EY IIHQTT PY+ + NG+AE+KN
Sbjct: 614 AEICLEYGIIHQTTAPYTPQSNGLAERKN 642
Score = 32.0 bits (71), Expect(2) = 2e-32
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 6 NLCDFRSIPTRGGKKIFYHF 65
N+CD +S P+RGGKK F F
Sbjct: 541 NICDMKSTPSRGGKKYFITF 560
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 130 bits (327), Expect(2) = 2e-31
Identities = 64/88 (72%), Positives = 69/88 (78%)
Frame = +1
Query: 49 KYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEYDSPFA 228
KYFITFIDDCT YCYVYLL SKDEA++ FI YK EVENQLNRKIK LR RG EY PF
Sbjct: 537 KYFITFIDDCTKYCYVYLLKSKDEALDKFILYKNEVENQLNRKIKELRSDRGGEYVVPFM 596
Query: 229 KLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
LCE+ IIHQ T PYS + NGIAE+KN
Sbjct: 597 SLCEQSGIIHQVTAPYSPQSNGIAERKN 624
Score = 31.2 bits (69), Expect(2) = 2e-31
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIFYHF 65
+++CDF+SI TRGG K F F
Sbjct: 522 SDICDFKSIQTRGGNKYFITF 542
>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 130 bits (328), Expect(2) = 1e-30
Identities = 62/89 (69%), Positives = 71/89 (79%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEYDSPF 225
KKYFITFIDDCT YCYVYLL SKDEAI MF YK EVENQL++KIK +R RG EY+SPF
Sbjct: 676 KKYFITFIDDCTRYCYVYLLKSKDEAIEMFKHYKIEVENQLSKKIKAIRSDRGGEYESPF 735
Query: 226 AKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
+ C E+ IIHQT PYS + NG+AE+KN
Sbjct: 736 EEFCLEHGIIHQTIAPYSPQSNGMAERKN 764
Score = 28.1 bits (61), Expect(2) = 1e-30
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIFYHF 65
+++CD + + TRGGKK F F
Sbjct: 662 SDICDLKFVQTRGGKKYFITF 682
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 132 bits (331), Expect(2) = 2e-30
Identities = 60/88 (68%), Positives = 72/88 (81%)
Frame = +1
Query: 49 KYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEYDSPFA 228
KYFITF+DD T YCYVYLL SKDEAI F+ YK EVENQLN+KIK+LR RG EY+SPF
Sbjct: 548 KYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFV 607
Query: 229 KLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
+C ++ IIH+TTTPYS + NG+AE+KN
Sbjct: 608 DICAQHGIIHETTTPYSPQSNGVAERKN 635
Score = 26.2 bits (56), Expect(2) = 2e-30
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIFYHF 65
+++CD + + TRGG K F F
Sbjct: 533 SDICDLKFVQTRGGNKYFITF 553
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 130 bits (326), Expect(2) = 7e-30
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +1
Query: 49 KYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEYDSPFA 228
KYFITF+DD T YCYVYLL SKDEAI F+ YK EVENQLN+KIK+LR RG EY+SPF
Sbjct: 548 KYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFV 607
Query: 229 KLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
+C ++ IIH+TT PYS + NG+AE+KN
Sbjct: 608 DICAQHGIIHETTAPYSPQSNGVAERKN 635
Score = 26.2 bits (56), Expect(2) = 7e-30
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIFYHF 65
+++CD + + TRGG K F F
Sbjct: 533 SDICDLKFVQTRGGNKYFITF 553
>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
Length = 839
Score = 121 bits (304), Expect(2) = 4e-27
Identities = 55/89 (61%), Positives = 71/89 (79%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEYDSPF 225
K YFITFIDDC YCYVYLL SKDEA+++F YK EVENQL+RKIK +R RG +Y++PF
Sbjct: 344 KMYFITFIDDCIRYCYVYLLRSKDEALDVFKHYKNEVENQLSRKIKAIRSDRGGKYEAPF 403
Query: 226 AKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
+ C ++ IIHQTT PYS + NG+A++K+
Sbjct: 404 GEFCSKHGIIHQTTAPYSPQSNGVAKRKS 432
Score = 25.4 bits (54), Expect(2) = 4e-27
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 6 NLCDFRSIPTRGGKKIFYHF 65
++CD + + TRGGK F F
Sbjct: 331 DICDLKFVQTRGGKMYFITF 350
>gb|AAP03376.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|50881451|gb|AAT85296.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710325|gb|ABF98120.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 783
Score = 122 bits (305), Expect(2) = 7e-27
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LRF RG EY +
Sbjct: 58 KKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRFDRGGEYFSNE 117
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
F CEEY IIH+ T PYS + NG+AE+KN
Sbjct: 118 FTSFCEEYGIIHERTHPYSPQSNGVAERKN 147
Score = 24.3 bits (51), Expect(2) = 7e-27
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 44 SDLCEMNGVLTKGGKKYF 61
>gb|AAX96359.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549036|gb|ABA91833.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 709
Score = 120 bits (301), Expect(2) = 2e-26
Identities = 58/90 (64%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK+LR RG EY +
Sbjct: 460 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKTYKAEVENQLERKIKLLRSDRGGEYFFNE 519
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 520 FASFCEEFGIIHERTPPYSPQSNGVAERKN 549
Score = 24.3 bits (51), Expect(2) = 2e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 446 SDLCEMNGVLTKGGKKYF 463
>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1479
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LR RG EY +
Sbjct: 685 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 744
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 745 FASFCEEFGIIHEMTPPYSPQSNGVAERKN 774
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 671 SDLCEMNGVLTKGGKKYF 688
>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LR RG EY +
Sbjct: 619 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 678
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 679 FASFCEEFGIIHEMTPPYSPQSNGVAERKN 708
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 605 SDLCEMNGVLTKGGKKYF 622
>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1408
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LR RG EY +
Sbjct: 614 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 673
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 674 FASFCEEFGIIHEMTPPYSPQSNGVAERKN 703
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 600 SDLCEMNGVLTKGGKKYF 617
>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
Length = 1394
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LR RG EY +
Sbjct: 600 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 659
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 660 FASFCEEFGIIHEMTPPYSPQSNGVAERKN 689
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 586 SDLCEMNGVLTKGGKKYF 603
>emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group]
Length = 1321
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LR RG EY +
Sbjct: 527 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 586
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 587 FASFCEEFGIIHEMTPPYSPQSNGVAERKN 616
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 513 SDLCEMNGVLTKGGKKYF 530
>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LR RG EY +
Sbjct: 619 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 678
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 679 FASFCEEFGIIHEMTPPYSPQSNGVAERKN 708
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 605 SDLCEMNGVLTKGGKKYF 622
>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1298
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LR RG EY +
Sbjct: 619 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 678
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 679 FASFCEEFGIIHEMTPPYSPQSNGVAERKN 708
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 605 SDLCEMNGVLTKGGKKYF 622
>gb|ABB47787.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1288
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 57/90 (63%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVY+L +KDE ++ F YKAEVENQL RKIK LRF RG EY +
Sbjct: 574 KKYFMTLIDDCTRFCYVYVLKTKDETLHYFKIYKAEVENQLERKIKRLRFDRGGEYFSNK 633
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 634 FASFCEEFGIIHERTPPYSPQSNGVAERKN 663
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 560 SDLCEMNGVLTKGGKKYF 577
>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LR RG EY +
Sbjct: 619 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 678
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 679 FASFCEEFGIIHEMTPPYSPQSNGVAERKN 708
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 605 SDLCEMNGVLTKGGKKYF 622
>gb|AAL31045.1|AC078893_8 putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 57/90 (63%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVY+L +KDE ++ F YKAEVENQL RKIK LRF RG EY +
Sbjct: 566 KKYFMTLIDDCTRFCYVYVLKTKDETLHYFKIYKAEVENQLERKIKRLRFDRGGEYFSNK 625
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 626 FASFCEEFGIIHERTPPYSPQSNGVAERKN 655
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 552 SDLCEMNGVLTKGGKKYF 569
>dbj|BAB03249.1| polyprotein [Oryza sativa]
Length = 1268
Score = 119 bits (299), Expect(2) = 3e-26
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LR RG EY +
Sbjct: 474 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 533
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 534 FASFCEEFGIIHEMTPPYSPQSNGVAERKN 563
Score = 24.3 bits (51), Expect(2) = 3e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 460 SDLCEMNGVLTKGGKKYF 477
>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1452
Score = 119 bits (298), Expect(2) = 4e-26
Identities = 58/90 (64%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +1
Query: 46 KKYFITFIDDCTCYCYVYLLSSKDEAINMFIKYKAEVENQLNRKIKMLRFVRGVEY-DSP 222
KKYF+T IDDCT +CYVYLL +KDEA++ F YKAEVENQL RKIK LR RG EY +
Sbjct: 662 KKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 721
Query: 223 FAKLCEEYSIIHQTTTPYSLRQNGIAEKKN 312
FA CEE+ IIH+ T PYS + NG+AE+KN
Sbjct: 722 FASFCEEFGIIHEMTPPYSPQSNGVAERKN 751
Score = 24.3 bits (51), Expect(2) = 4e-26
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 3 TNLCDFRSIPTRGGKKIF 56
++LC+ + T+GGKK F
Sbjct: 648 SDLCEMNGVLTKGGKKYF 665