BLASTX nr result

ID: Paeonia23_contig00039310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00039310
         (595 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    60   5e-07
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    60   6e-07
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    60   6e-07
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    58   2e-06
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo...    56   7e-06

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +3

Query: 291 MKIVSWNIRGKGRQGFLFKLRYITKIVSPDVVFFCDTRDRLGSI-NRCGAKSLFDGSFFV 467
           M+I+SWN +G G    +  LR I  +  P+V+F C+T+ R   + N  G    FD    V
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFD-LHTV 59

Query: 468 NSLGLSGGIALFWKSSSVDVHILQNHDRYIHSCII 572
             +G SGG+AL WK  SV + +LQ+  R I + +I
Sbjct: 60  EPIGKSGGLALMWK-DSVQIKVLQSDKRLIDALLI 93


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 36/93 (38%), Positives = 50/93 (53%)
 Frame = +3

Query: 291 MKIVSWNIRGKGRQGFLFKLRYITKIVSPDVVFFCDTRDRLGSINRCGAKSLFDGSFFVN 470
           M  +SWN RG G    + +L  + K  S   VF C+TR  +  I R   +    G   V+
Sbjct: 434 MNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVS 493

Query: 471 SLGLSGGIALFWKSSSVDVHILQNHDRYIHSCI 569
           S G+SGG+ALFW   SV V IL  ++R+I + I
Sbjct: 494 SDGMSGGLALFW-HESVHVEILNKNERFIDAYI 525


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 36/93 (38%), Positives = 50/93 (53%)
 Frame = +3

Query: 291 MKIVSWNIRGKGRQGFLFKLRYITKIVSPDVVFFCDTRDRLGSINRCGAKSLFDGSFFVN 470
           M  +SWN RG G    + +L  + K  S   VF C+TR  +  I R   +    G   V+
Sbjct: 462 MNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVS 521

Query: 471 SLGLSGGIALFWKSSSVDVHILQNHDRYIHSCI 569
           S G+SGG+ALFW   SV V IL  ++R+I + I
Sbjct: 522 SDGMSGGLALFW-HESVHVEILNKNERFIDAYI 553


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/93 (34%), Positives = 49/93 (52%)
 Frame = +3

Query: 291 MKIVSWNIRGKGRQGFLFKLRYITKIVSPDVVFFCDTRDRLGSINRCGAKSLFDGSFFVN 470
           M  ++WN RG G    +  LR + +     +VF C+TR  +  ++R   K  F G   V+
Sbjct: 636 MSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVS 695

Query: 471 SLGLSGGIALFWKSSSVDVHILQNHDRYIHSCI 569
           S G SGG+AL+W   SV V +   + RYI + +
Sbjct: 696 SEGKSGGLALYW-DESVSVDVKDINKRYIDAYV 727


>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
          Length = 1170

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 34/95 (35%), Positives = 50/95 (52%)
 Frame = +3

Query: 300 VSWNIRGKGRQGFLFKLRYITKIVSPDVVFFCDTRDRLGSINRCGAKSLFDGSFFVNSLG 479
           +SWN RG GR   + +L  + +   P VVF  +TR   G +     +    G   VN +G
Sbjct: 95  LSWNCRGLGRPRAVQELVCMVQTHRPKVVFLSETRQNQGFVENIKWQIGLRGCLAVNGIG 154

Query: 480 LSGGIALFWKSSSVDVHILQNHDRYIHSCIIDKNE 584
             GGIALFW   SV+V I   + R+I + I ++N+
Sbjct: 155 KGGGIALFW-DESVNVTIKSYNLRHIDAVITEQNQ 188


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