BLASTX nr result

ID: Paeonia23_contig00039008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00039008
         (446 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM09536.1| reverse transcriptase [Medicago sativa]                 76   6e-12
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    71   3e-11
ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314...    66   4e-09
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    63   5e-08
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    54   1e-07
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    59   5e-07
ref|XP_004511443.1| PREDICTED: uncharacterized protein LOC101507...    59   9e-07
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    56   5e-06

>gb|AAM09536.1| reverse transcriptase [Medicago sativa]
          Length = 168

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
 Frame = +2

Query: 38  YYMSSIWPGLKMAILVLKNNCLWFLGKGTSIDSWHDN*LGGAM-KHWIW---VDSNWKAT 205
           Y  SS+WPGLK  I  +  + +W +G G +I  W D  L   + +HW     + S+ +  
Sbjct: 62  YITSSVWPGLKSNIQYIFYHSIWTVGNGRNIRFWSDKWLDSPIAEHWNIPPSLISDIELK 121

Query: 206 VSDFIIDHKWCIPYSFRQKYPDLWRKIQQVTIPLGDCKDILIW 334
           V+DFI++  WC+P   +QK P L  KIQ +T+P+ D  D+L W
Sbjct: 122 VNDFIVNGTWCLPDYIQQKDPALAAKIQSITLPVDDIPDVLHW 164


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 751

 Score = 70.9 bits (172), Expect(2) = 3e-11
 Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
 Frame = +2

Query: 2   KF*LSVHMETKKYYMSSIWPGLKMAILVLKNNCLWFLGKGTSIDSWHDN*LGGAMKHWIW 181
           +F +  HM+ + Y+ SS+W GLK  + +L  +  W +G G SI  W D  L  ++   + 
Sbjct: 332 RFTIFRHMKFQ-YFTSSVWHGLKRVLPLLFEHSRWIIGDGNSILFWSDKWLHSSIIQQLN 390

Query: 182 VDSN---WKATVSDFIIDHKWCIPYSFRQKYPDLWRKIQQVTIPLGDCKDILIWKKDSSG 352
           + S      + V+DFI D +W +P  F   +PD  ++I ++ +P     DILIW+  SSG
Sbjct: 391 MGSLSHLLNSRVADFIWDQQWALPSHFSNLFPDCAKQILEIPLPNTPESDILIWEHSSSG 450



 Score = 22.7 bits (47), Expect(2) = 3e-11
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 409 WASNMWSKAIPP 444
           WAS++W   IPP
Sbjct: 470 WASSVWHSFIPP 481


>ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314263 [Fragaria vesca
           subsp. vesca]
          Length = 839

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
 Frame = +2

Query: 38  YYMSSIWPGLKMAILVLKNNCLWFLGKGTSIDSWHDN*LGGAMKHWIWV----DSNWKAT 205
           Y  SSIWPG++     +  N  W +G G SID WH N L G++   + +      +    
Sbjct: 492 YKRSSIWPGMRPLFTDILYNSKWVVGNGHSIDFWHGNWLNGSIIDKLGIVHQLGKSLCGK 551

Query: 206 VSDFIIDHKWCIPYSFRQKYPDLWRKIQQVTIPLGDCKDILIWKKDSSGKVNL 364
           VSDFI++  W    +   +   LW +I  + +P  D  D L+W     G ++L
Sbjct: 552 VSDFILNGSWLCSTNLNAELAALWSEILAIQLPSYDIDDKLVWLDSLEGSLSL 604


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
 Frame = +2

Query: 38   YYMSSIWPGLKMAILVLKNNCLWFLGKGTSIDSWHDN*LGGAMKHWIWVD----SNWKAT 205
            +  SS+W G+K  + +L+ N LW +G G  I+ W +N LG  +     +D    +++   
Sbjct: 835  FVKSSVWHGVKNHMSILRQNKLWIVGTGDRINLWTNNWLGEPLVTLFNIDPFFHASFTGK 894

Query: 206  VSDFIIDHKWCIPYSFRQKYPDLWRKIQQVTIPLGDCKDILIWKKDSSGKVNLKSILS-- 379
            VS+ I++  W +P S     P++  ++  +T+P  +  D L+W   + G++  K  +S  
Sbjct: 895  VSEVIVNGNWDLPASL--LVPEVTSRLASITLPRTELPDSLVWTHSADGQLTSKHAVSFL 952

Query: 380  TNLFLF 397
             N F F
Sbjct: 953  RNAFRF 958


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 53.5 bits (127), Expect(2) = 1e-07
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
 Frame = +2

Query: 92  NNCLWFLGKGTSIDSWHDN*LGGAMKHWIWVDSN----WKATVSDFIIDHKWCIPYSFRQ 259
           +N  W LG G  I  W D   G  +   + V+ +    +   V D+I + +W IP +   
Sbjct: 2   DNSKWLLGNGRLIKFWEDAWCGEPLHETLNVNQDIYREYPQFVHDYIQNFRWHIPQTILV 61

Query: 260 KYPDLWRKIQQVTIPLGDCKDILIWKKDSSGKVNLK 367
            YP L    ++VTIP+ D +D LIW  +S+G + ++
Sbjct: 62  HYPALKLLAEKVTIPMEDKEDKLIWNHNSNGDLMMR 97



 Score = 28.1 bits (61), Expect(2) = 1e-07
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 379 YQSFPVYDYKWASNMWSKAIPP 444
           +++ PV  + WA  +WSK IPP
Sbjct: 102 FKNQPVNTHNWAKLIWSKDIPP 123


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
 Frame = +2

Query: 32  KKYYMSSIWPGLKMAILVLKNNCLWFLGKGTSIDSWHDN*LGGAM-----KHWIWVDSNW 196
           + Y  SSIWPG++    +++NN  W +G G  I  W DN LG  +      H    D++ 
Sbjct: 397 RSYAPSSIWPGVRKFWGLVQNNTRWLVGTGDKISFWRDNFLGRPLIEFFGNHGALNDNS- 455

Query: 197 KATVSDFIIDHKWCIPYSFRQKYPDLWRKIQQVTIPLG-DCKDILIWKKDSSGKVNLKSI 373
            + VSD+I +  W +P   +     +   I QV I +    +D LIW+  S+G++  K  
Sbjct: 456 -SLVSDYIDNGSWVLPPLLQLNLSAVCNLICQVPISINPSMEDKLIWQASSTGELTAK-- 512

Query: 374 LSTNLFLFM 400
                FLF+
Sbjct: 513 ---QAFLFL 518


>ref|XP_004511443.1| PREDICTED: uncharacterized protein LOC101507244 [Cicer arietinum]
          Length = 132

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
 Frame = +2

Query: 47  SSIWPGLKMAILVLKNNCLWFLGKGTSIDSWHDN*LGGAMKHWI----WVDSNWKATVSD 214
           SSIWPG+ M++  ++ N  W  G G+ I+ W D  L      ++    +V +   A V D
Sbjct: 3   SSIWPGICMSLHNIEENGSWKFGDGSKINFWSDTWLSKPATDFLEIHAFVHNFLYAKVKD 62

Query: 215 FIIDHKWCIPYSFRQKYPDLWRKIQQVTIPLGDCKDILIWKKDSSGKVNLK 367
           F+++  W IP      +P L  KI  ++I   +  D L+W   ++  +  K
Sbjct: 63  FLVNMMWAIPNFLTASFPTLTSKINLISISRFEVDDHLVWVPSTTSIMTFK 113


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
 Frame = +2

Query: 38  YYMSSIWPGLKMAILVLKNNCLWFLGKGTSIDSWHDN*LGGAMKHWIWVD----SNWKAT 205
           Y++SS+W G+K  +  + +N +W +G G +I+ W DN LG  +   + +     + ++A+
Sbjct: 372 YFLSSMWGGIKEHLSTISSNSIWIVGTGANINLWTDNWLGIRLVDSLNISPTLHTKFRAS 431

Query: 206 VSDFIIDHKWCIPYSFRQKYPDLWRKIQQVTIPLGDCKDILIWKKDS 346
           V+D I++    +P +     PD+  ++  + +P     D L+W   S
Sbjct: 432 VADVIVNGALSLP-AAALAVPDIASRVACLVLPTAPLPDALVWLHSS 477


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