BLASTX nr result
ID: Paeonia23_contig00038884
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00038884
(330 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73912.1| polyprotein [Citrus sinensis] 75 3e-20
gb|AFB73911.1| polyprotein [Citrus sinensis] 75 3e-20
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 62 3e-12
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 62 3e-12
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 61 4e-12
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 61 6e-12
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 61 9e-12
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 51 4e-10
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 54 8e-07
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 53 2e-06
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 53 2e-06
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 54 3e-06
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 54 4e-06
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 53 6e-06
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 75.1 bits (183), Expect(4) = 3e-20
Identities = 39/64 (60%), Positives = 43/64 (67%), Gaps = 11/64 (17%)
Frame = -2
Query: 257 EESKMMWHFKLGHMSELGLKILGKST-----------FFEHYVTNKHHRLKFNRFVARSK 111
EES MMWH KLGHMSE GLKIL + F EH VT+K HRLKF+R +ARSK
Sbjct: 420 EESTMMWHLKLGHMSEQGLKILSERKLPPGLKSVSLPFCEHCVTSKQHRLKFSRSIARSK 479
Query: 110 CILD 99
CILD
Sbjct: 480 CILD 483
Score = 34.3 bits (77), Expect(4) = 3e-20
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -3
Query: 328 SNLFMLKGETM*ETNACVASTTKKKS 251
+NLFMLKGET+ E +ACVAS ++ +
Sbjct: 398 ANLFMLKGETLQEADACVASNGEEST 423
Score = 33.5 bits (75), Expect(4) = 3e-20
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -3
Query: 79 ESQDMSLGGAKYFVFFIDDH 20
ES D+S+GGAKY V FIDD+
Sbjct: 491 ESPDISMGGAKYMVTFIDDY 510
Score = 20.4 bits (41), Expect(4) = 3e-20
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 99 LIHSDVW 79
LIHSDVW
Sbjct: 484 LIHSDVW 490
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 75.1 bits (183), Expect(4) = 3e-20
Identities = 39/64 (60%), Positives = 43/64 (67%), Gaps = 11/64 (17%)
Frame = -2
Query: 257 EESKMMWHFKLGHMSELGLKILGKST-----------FFEHYVTNKHHRLKFNRFVARSK 111
EES MMWH KLGHMSE GLKIL + F EH VT+K HRLKF+R +ARSK
Sbjct: 420 EESTMMWHLKLGHMSEQGLKILSERKLLPGLKSVSLPFCEHCVTSKQHRLKFSRSIARSK 479
Query: 110 CILD 99
CILD
Sbjct: 480 CILD 483
Score = 34.3 bits (77), Expect(4) = 3e-20
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -3
Query: 328 SNLFMLKGETM*ETNACVASTTKKKS 251
+NLFMLKGET+ E +ACVAS ++ +
Sbjct: 398 ANLFMLKGETLQEADACVASNGEEST 423
Score = 33.5 bits (75), Expect(4) = 3e-20
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -3
Query: 79 ESQDMSLGGAKYFVFFIDDH 20
ES D+S+GGAKY V FIDD+
Sbjct: 491 ESPDISMGGAKYMVTFIDDY 510
Score = 20.4 bits (41), Expect(4) = 3e-20
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 99 LIHSDVW 79
LIHSDVW
Sbjct: 484 LIHSDVW 490
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 62.0 bits (149), Expect(3) = 3e-12
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = -2
Query: 260 EEESKMMWHFKLGHMSELGLKILGKST-----------FFEHYVTNKHHRLKFNRFVARS 114
+EE+ MMWH +LGHMSE GLK+L + F EH V +K HRLKF + ARS
Sbjct: 419 QEETTMMWHRRLGHMSERGLKVLAERNLIPGLKSVSLPFCEHCVISKQHRLKFAKSTARS 478
Query: 113 KCILD 99
K ILD
Sbjct: 479 KHILD 483
Score = 34.3 bits (77), Expect(3) = 3e-12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -3
Query: 79 ESQDMSLGGAKYFVFFIDDH 20
ES ++S+GGAKYFV FIDD+
Sbjct: 491 ESPEVSIGGAKYFVSFIDDY 510
Score = 20.4 bits (41), Expect(3) = 3e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 99 LIHSDVW 79
LIHSDVW
Sbjct: 484 LIHSDVW 490
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 62.0 bits (149), Expect(3) = 3e-12
Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 11/65 (16%)
Frame = -2
Query: 260 EEESKMMWHFKLGHMSELGLKILGKST-----------FFEHYVTNKHHRLKFNRFVARS 114
+EE+ MMWH +LGHMSE GLK+L + F EH V +K HRLKF R RS
Sbjct: 419 QEETTMMWHQRLGHMSERGLKVLAERNLLHGLKAVNLPFCEHCVISKQHRLKFARVTTRS 478
Query: 113 KCILD 99
K ILD
Sbjct: 479 KHILD 483
Score = 33.9 bits (76), Expect(3) = 3e-12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -3
Query: 79 ESQDMSLGGAKYFVFFIDDH 20
ES ++SLGGA+YFV FIDD+
Sbjct: 491 ESPEISLGGARYFVSFIDDY 510
Score = 20.4 bits (41), Expect(3) = 3e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 99 LIHSDVW 79
LIHSDVW
Sbjct: 484 LIHSDVW 490
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 61.2 bits (147), Expect(3) = 4e-12
Identities = 35/65 (53%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = -2
Query: 260 EEESKMMWHFKLGHMSELGLKIL-------GKST----FFEHYVTNKHHRLKFNRFVARS 114
+EE+ MMWH +LGHMSE GLK+L G T F EH V +K HRLKF R RS
Sbjct: 419 QEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVISKQHRLKFARVTTRS 478
Query: 113 KCILD 99
K ILD
Sbjct: 479 KHILD 483
Score = 34.3 bits (77), Expect(3) = 4e-12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -3
Query: 79 ESQDMSLGGAKYFVFFIDDH 20
ES ++SLGGA+YFV FIDD+
Sbjct: 491 ESPELSLGGARYFVSFIDDY 510
Score = 20.4 bits (41), Expect(3) = 4e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 99 LIHSDVW 79
LIHSDVW
Sbjct: 484 LIHSDVW 490
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 61.2 bits (147), Expect(3) = 6e-12
Identities = 35/65 (53%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = -2
Query: 260 EEESKMMWHFKLGHMSELGLKIL-------GKST----FFEHYVTNKHHRLKFNRFVARS 114
+EE+ MMWH +LGHMSE GLK+L G T F EH V +K HRLKF R RS
Sbjct: 419 QEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVMSKQHRLKFARVTTRS 478
Query: 113 KCILD 99
K ILD
Sbjct: 479 KHILD 483
Score = 33.9 bits (76), Expect(3) = 6e-12
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -3
Query: 79 ESQDMSLGGAKYFVFFIDDH 20
ES ++SLGGA+YFV FIDD+
Sbjct: 491 ESPEISLGGARYFVSFIDDY 510
Score = 20.4 bits (41), Expect(3) = 6e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 99 LIHSDVW 79
LIHSDVW
Sbjct: 484 LIHSDVW 490
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 61.2 bits (147), Expect(3) = 9e-12
Identities = 35/65 (53%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = -2
Query: 260 EEESKMMWHFKLGHMSELGLKIL-------GKST----FFEHYVTNKHHRLKFNRFVARS 114
+EE+ MMWH +LGHMSE GLK+L G T F EH V +K HRLKF R RS
Sbjct: 419 QEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVISKQHRLKFARVTTRS 478
Query: 113 KCILD 99
K ILD
Sbjct: 479 KHILD 483
Score = 33.1 bits (74), Expect(3) = 9e-12
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -3
Query: 79 ESQDMSLGGAKYFVFFIDDH 20
ES +SLGGA+YFV FIDD+
Sbjct: 491 ESPKLSLGGARYFVSFIDDY 510
Score = 20.4 bits (41), Expect(3) = 9e-12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 99 LIHSDVW 79
LIHSDVW
Sbjct: 484 LIHSDVW 490
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 50.8 bits (120), Expect(3) = 4e-10
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 11/63 (17%)
Frame = -2
Query: 254 ESKMMWHFKLGHMSELGLKILGKSTFF-----------EHYVTNKHHRLKFNRFVARSKC 108
+S ++WH KLGHMS+ G+KIL + EH +T+K HRLKF+ +R K
Sbjct: 411 DSTLLWHQKLGHMSDQGMKILVEQKLIPGLTKVSLPLCEHCITSKQHRLKFSTSNSRGKV 470
Query: 107 ILD 99
+L+
Sbjct: 471 VLE 473
Score = 30.8 bits (68), Expect(3) = 4e-10
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3
Query: 64 SLGGAKYFVFFIDDH 20
SLGGAKYFV FIDD+
Sbjct: 486 SLGGAKYFVSFIDDY 500
Score = 27.3 bits (59), Expect(3) = 4e-10
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 328 SNLFMLKGETM*ETNACVAS 269
+NL+MLKGET+ E A VA+
Sbjct: 388 ANLYMLKGETLQEAEASVAA 407
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 53.9 bits (128), Expect(2) = 8e-07
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Frame = -2
Query: 263 QEEESKM-MWHFKLGHMSELGLKIL-----------GKSTFFEHYVTNKHHRLKFNRFVA 120
++E SK MWH +LGHMSELG+ L G F EH V KH R+KFN V
Sbjct: 315 KDEPSKTNMWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVH 374
Query: 119 RSKCILD 99
R+K ILD
Sbjct: 375 RTKGILD 381
Score = 24.6 bits (52), Expect(2) = 8e-07
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 76 SQDMSLGGAKYFVFFIDDH 20
S+ SLGGA+Y + IDD+
Sbjct: 391 SRKPSLGGARYMLTIIDDY 409
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 52.8 bits (125), Expect(2) = 2e-06
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Frame = -2
Query: 263 QEEESKM-MWHFKLGHMSELGLKIL-----------GKSTFFEHYVTNKHHRLKFNRFVA 120
++E SK +WH +LGHMSELG+ L G F EH V KH R+KFN V
Sbjct: 420 KDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVH 479
Query: 119 RSKCILD 99
R+K ILD
Sbjct: 480 RTKGILD 486
Score = 24.6 bits (52), Expect(2) = 2e-06
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 76 SQDMSLGGAKYFVFFIDDH 20
S+ SLGGA+Y + IDD+
Sbjct: 496 SRKPSLGGARYMLTIIDDY 514
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 52.8 bits (125), Expect(2) = 2e-06
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Frame = -2
Query: 263 QEEESKM-MWHFKLGHMSELGLKIL-----------GKSTFFEHYVTNKHHRLKFNRFVA 120
++E SK +WH +LGHMSELG+ L G F EH V KH R+KFN V
Sbjct: 370 KDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGYTQGNMKFCEHCVFGKHKRVKFNTSVH 429
Query: 119 RSKCILD 99
R+K ILD
Sbjct: 430 RTKGILD 436
Score = 24.6 bits (52), Expect(2) = 2e-06
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 76 SQDMSLGGAKYFVFFIDDH 20
S+ SLGGA+Y + IDD+
Sbjct: 446 SRKPSLGGARYMLTIIDDY 464
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 53.9 bits (128), Expect(2) = 3e-06
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Frame = -2
Query: 263 QEEESKM-MWHFKLGHMSELGLKIL-----------GKSTFFEHYVTNKHHRLKFNRFVA 120
++E SK +WH +LGHMSELG+ L G F EH V KH R+KFN V
Sbjct: 360 KDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVH 419
Query: 119 RSKCILD 99
RSK ILD
Sbjct: 420 RSKGILD 426
Score = 22.7 bits (47), Expect(2) = 3e-06
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 76 SQDMSLGGAKYFVFFIDDH 20
S+ SLGGA Y + IDD+
Sbjct: 436 SRKPSLGGACYMLTIIDDY 454
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 53.5 bits (127), Expect(2) = 4e-06
Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 11/59 (18%)
Frame = -2
Query: 242 MWHFKLGHMSELGLKIL-----------GKSTFFEHYVTNKHHRLKFNRFVARSKCILD 99
+WH +LGHMSELG+ L GK F EH V KH R+KFN V R+K ILD
Sbjct: 428 LWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFCEHCVFGKHKRVKFNTSVHRTKGILD 486
Score = 22.7 bits (47), Expect(2) = 4e-06
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 76 SQDMSLGGAKYFVFFIDDH 20
S+ LGGA+Y + IDD+
Sbjct: 496 SRKAYLGGARYMLTIIDDY 514
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 52.8 bits (125), Expect(2) = 6e-06
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Frame = -2
Query: 263 QEEESKM-MWHFKLGHMSELGLKIL-----------GKSTFFEHYVTNKHHRLKFNRFVA 120
++E SK +WH +LGHMSELG+ L G F EH V KH R+KFN V
Sbjct: 417 KDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVH 476
Query: 119 RSKCILD 99
R+K ILD
Sbjct: 477 RTKGILD 483
Score = 22.7 bits (47), Expect(2) = 6e-06
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 76 SQDMSLGGAKYFVFFIDDH 20
S+ SLGGA Y + IDD+
Sbjct: 493 SRKPSLGGACYMLTIIDDY 511