BLASTX nr result
ID: Paeonia23_contig00037460
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00037460
(419 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007204825.1| hypothetical protein PRUPE_ppa004064mg [Prun... 201 7e-50
gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis] 199 4e-49
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi... 199 4e-49
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi... 199 4e-49
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 198 6e-49
ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein... 192 4e-47
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi... 191 1e-46
ref|XP_006381622.1| pentatricopeptide repeat-containing family p... 191 1e-46
gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis] 190 2e-46
ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containi... 190 2e-46
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr... 188 8e-46
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi... 186 3e-45
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi... 182 4e-44
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,... 181 1e-43
ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Caps... 179 4e-43
ref|XP_002885810.1| pentatricopeptide repeat-containing protein ... 179 4e-43
gb|EYU18527.1| hypothetical protein MIMGU_mgv1a003955mg [Mimulus... 173 2e-41
ref|XP_004513678.1| PREDICTED: pentatricopeptide repeat-containi... 172 4e-41
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana] 172 4e-41
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar... 172 4e-41
>ref|XP_007204825.1| hypothetical protein PRUPE_ppa004064mg [Prunus persica]
gi|462400356|gb|EMJ06024.1| hypothetical protein
PRUPE_ppa004064mg [Prunus persica]
Length = 532
Score = 201 bits (512), Expect = 7e-50
Identities = 91/138 (65%), Positives = 118/138 (85%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL+E+Q++ ++SPDV+T+TSVISGYCKLG+MEEASV+FDEM +SG+ P ++TFN LIDGF
Sbjct: 278 LLKEVQSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMNNSGVGPTSVTFNALIDGF 337
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK+GN+ SA +YEKML G+ PDVITFTSLID YCRAG++ QGL LW EM +N+ P+
Sbjct: 338 GKSGNMISARAMYEKMLFHGYRPDVITFTSLIDGYCRAGKLSQGLKLWQEMNAKNVSPSA 397
Query: 361 YTYAILIGALCKENRLQE 414
YT+++LI ALC+ENRLQE
Sbjct: 398 YTFSVLINALCRENRLQE 415
Score = 81.3 bits (199), Expect = 1e-13
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
L+ + D +PD ++S Y ++G++ A + DE + ++ TFN+LI G
Sbjct: 177 LVFDYMRSDGHTPDDSIAELLVSSYAQMGKLNNAEKLLDE-----VHCDSWTFNILIRGL 231
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRR-NLFPN 357
+ G I A + M SFG +PD++T+ +LI CRA +VD+G L E++ R L P+
Sbjct: 232 CRIGEIDKAFEFFSDMESFGCYPDIVTYNTLISGLCRANEVDRGCHLLKEVQSRIELSPD 291
Query: 358 EYTYAILIGALCKENRLQE 414
T+ +I CK +++E
Sbjct: 292 VITFTSVISGYCKLGKMEE 310
Score = 78.2 bits (191), Expect = 1e-12
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLID------------GF 180
PDV+T+TS+I GYC+ G++ + ++ EM + + P+ TF+VLI+ GF
Sbjct: 360 PDVITFTSLIDGYCRAGKLSQGLKLWQEMNAKNVSPSAYTFSVLINALCRENRLQEAHGF 419
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
KAGN+ A I +M PD +TFT LI C G++ + + + +M P+
Sbjct: 420 CKAGNVDEANLIVAEMEEKRCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDN 479
Query: 361 YTYAILIGALCK 396
T LI L K
Sbjct: 480 ITVDSLISCLMK 491
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVIS------------GYCKLGRMEEASVVFDEMTSSGIKP 144
L +E+ AK+ +SP T++ +I+ G+CK G ++EA+++ EM P
Sbjct: 384 LWQEMNAKN-VSPSAYTFSVLINALCRENRLQEAHGFCKAGNVDEANLIVAEMEEKRCSP 442
Query: 145 NTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLW 324
+ +TF +LI G G ++ A++ ++KML+ G PD IT SLI +AG ++
Sbjct: 443 DKVTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDNITVDSLISCLMKAGMPNEA---- 498
Query: 325 HEMKR 339
H +K+
Sbjct: 499 HHIKK 503
>gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]
Length = 732
Score = 199 bits (505), Expect = 4e-49
Identities = 91/138 (65%), Positives = 114/138 (82%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL E+Q+K +SPDVVT+TSVISGYCKLG+M+EAS +FDEM + GIKPNT TFN LIDGF
Sbjct: 456 LLREVQSKSKLSPDVVTFTSVISGYCKLGQMKEASFLFDEMINFGIKPNTFTFNALIDGF 515
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GKAG++ASA+T + KML G+HPDV++FTSLID YCR G ++QGL LW EM R++ PN
Sbjct: 516 GKAGDMASAITFFAKMLFHGYHPDVVSFTSLIDGYCRVGNLNQGLKLWREMNERSVRPNG 575
Query: 361 YTYAILIGALCKENRLQE 414
YT+++LI ALC+ NRL E
Sbjct: 576 YTFSVLIHALCRNNRLHE 593
Score = 134 bits (336), Expect = 2e-29
Identities = 66/136 (48%), Positives = 88/136 (64%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL E+Q++ ++SPD VT+TSVISGYCKLGRM EAS +F EM +SGIKP TFN LIDG
Sbjct: 315 LLRELQSRSELSPDAVTFTSVISGYCKLGRMSEASSLFAEMINSGIKPAAATFNALIDGH 374
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
KAG++ASAV ++ + ++ F PD TF LI C G+V + +M + P+
Sbjct: 375 AKAGDMASAVCLFRRNMTLHFQPDTWTFNILIRGLCGVGKVHTAFEFFKDMGKFGCSPDV 434
Query: 361 YTYAILIGALCKENRL 408
TY LI LC+ N +
Sbjct: 435 ITYNTLISGLCRNNEV 450
Score = 82.8 bits (203), Expect = 5e-14
Identities = 38/126 (30%), Positives = 70/126 (55%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PDVV++TS+I GYC++G + + ++ EM ++PN TF+VLI + + A
Sbjct: 538 PDVVSFTSLIDGYCRVGNLNQGLKLWREMNERSVRPNGYTFSVLIHALCRNNRLHEARDF 597
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
+++ P+ + ++D +C+AG VD+ M+ M+ + P++ T+ ILI C
Sbjct: 598 LKQLSCTNIIPEPFIYNPIVDGFCKAGNVDEANMIVAGMEGKGCKPDKVTFTILIIGNCM 657
Query: 397 ENRLQE 414
+ R+ E
Sbjct: 658 KGRMLE 663
Score = 76.3 bits (186), Expect = 4e-12
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL+E++ +D I + Y ++++ K ++ EA +F + +S +P+T TFN+LI G
Sbjct: 210 LLDELR-RDGIIVSSIVYNNLLNVLVKQNKVCEAVCLFRKHMNSRFRPSTWTFNILIQGL 268
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRN-LFPN 357
++ +A +M G PD++T+ +LI C+ VD+G L E++ R+ L P+
Sbjct: 269 CGIRDVYTAFEFLNEMGKLGCSPDIVTYNTLISGLCKTNDVDRGCNLLRELQSRSELSPD 328
Query: 358 EYTYAILIGALCKENRLQE 414
T+ +I CK R+ E
Sbjct: 329 AVTFTSVISGYCKLGRMSE 347
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/98 (29%), Positives = 52/98 (53%)
Frame = +1
Query: 28 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 207
+I P+ Y ++ G+CK G ++EA+++ M G KP+ +TF +LI G G + A
Sbjct: 605 NIIPEPFIYNPIVDGFCKAGNVDEANMIVAGMEGKGCKPDKVTFTILIIGNCMKGRMLEA 664
Query: 208 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLML 321
+ ++ KM + G P+ T LI +AG ++ +
Sbjct: 665 IGVFNKMKAVGCAPESRTANCLISCLLKAGMPNEAFSI 702
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/122 (27%), Positives = 56/122 (45%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PD ++ + ++GR++ + DE+ GI ++I +N L++ K + AV +
Sbjct: 186 PDSSIVEFLLCSHAQVGRLDLVEKLLDELRRDGIIVSSIVYNNLLNVLVKQNKVCEAVCL 245
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
+ K ++ F P TF LI C V +EM + P+ TY LI LCK
Sbjct: 246 FRKHMNSRFRPSTWTFNILIQGLCGIRDVYTAFEFLNEMGKLGCSPDIVTYNTLISGLCK 305
Query: 397 EN 402
N
Sbjct: 306 TN 307
>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 199 bits (505), Expect = 4e-49
Identities = 96/138 (69%), Positives = 111/138 (80%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL+E +SPDV+TYTS+ISGYCKLG M+ AS +FDEM SSGIKPN TFNVLIDGF
Sbjct: 271 LLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGF 330
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK GN+ SA+ +YEKML G PDV+TFTSLID YCR G+V+QGL LW EMK RNL PN
Sbjct: 331 GKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNV 390
Query: 361 YTYAILIGALCKENRLQE 414
YTYA+LI ALCKENR++E
Sbjct: 391 YTYAVLINALCKENRIRE 408
Score = 84.3 bits (207), Expect = 2e-14
Identities = 42/126 (33%), Positives = 68/126 (53%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PDVVT+TS+I GYC+ G + + +++EM + PN T+ VLI+ K I A
Sbjct: 353 PDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNF 412
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
+ S P + +ID +C+AG+VD+ + EM+ + P++ T+ ILI C
Sbjct: 413 LRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCM 472
Query: 397 ENRLQE 414
+ R+ E
Sbjct: 473 KGRMVE 478
Score = 78.2 bits (191), Expect = 1e-12
Identities = 47/132 (35%), Positives = 70/132 (53%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
L EE++ ++ +SP+V TY +I+ CK R+ EA + SS + P +N +IDGF
Sbjct: 377 LWEEMKVRN-LSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGF 435
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
KAG + A I +M PD ITFT LI C G++ + + +++M N P+E
Sbjct: 436 CKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDE 495
Query: 361 YTYAILIGALCK 396
T LI L K
Sbjct: 496 ITINSLISCLLK 507
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/130 (28%), Positives = 64/130 (49%)
Frame = +1
Query: 25 DDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIAS 204
D I PD ++S Y ++G+++ A +E+ GIK + +N L++ K +
Sbjct: 138 DGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDE 197
Query: 205 AVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIG 384
AV ++ + L F PDV +F LI CR G++D+ + M FP+ +Y LI
Sbjct: 198 AVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLIN 257
Query: 385 ALCKENRLQE 414
C+ N + +
Sbjct: 258 GFCRVNEISK 267
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +1
Query: 31 ISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAV 210
+SP V Y ++++ K ++EA ++F E P+ +FN+LI G + G I A
Sbjct: 177 VSPFV--YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAF 234
Query: 211 TIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGL-MLWHEMKRRNLFPNEYTYAILIGA 387
++ M +FG PD++++ +LI+ +CR ++ +G +L +M + + P+ TY +I
Sbjct: 235 EFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISG 294
Query: 388 LCK 396
CK
Sbjct: 295 YCK 297
Score = 67.0 bits (162), Expect = 3e-09
Identities = 32/94 (34%), Positives = 51/94 (54%)
Frame = +1
Query: 28 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 207
++ P Y VI G+CK G+++EA+ + EM +P+ ITF +LI G G + A
Sbjct: 420 EVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEA 479
Query: 208 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQ 309
++ + KM+ PD IT SLI +AG ++
Sbjct: 480 ISTFYKMIEINCVPDEITINSLISCLLKAGMPNE 513
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/116 (26%), Positives = 59/116 (50%)
Frame = +1
Query: 49 TYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKM 228
TY ++ CK+G + A +VFD M S GI P++ +L+ + + G + SA ++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 229 LSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
+G + +L++ + VD+ ++L+ E P+ Y++ ILI LC+
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226
>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 199 bits (505), Expect = 4e-49
Identities = 96/138 (69%), Positives = 111/138 (80%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL+E +SPDV+TYTS+ISGYCKLG M+ AS +FDEM SSGIKPN TFNVLIDGF
Sbjct: 271 LLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGF 330
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK GN+ SA+ +YEKML G PDV+TFTSLID YCR G+V+QGL LW EMK RNL PN
Sbjct: 331 GKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNV 390
Query: 361 YTYAILIGALCKENRLQE 414
YTYA+LI ALCKENR++E
Sbjct: 391 YTYAVLINALCKENRIRE 408
Score = 84.3 bits (207), Expect = 2e-14
Identities = 42/126 (33%), Positives = 68/126 (53%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PDVVT+TS+I GYC+ G + + +++EM + PN T+ VLI+ K I A
Sbjct: 353 PDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNF 412
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
+ S P + +ID +C+AG+VD+ + EM+ + P++ T+ ILI C
Sbjct: 413 LRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCM 472
Query: 397 ENRLQE 414
+ R+ E
Sbjct: 473 KGRMVE 478
Score = 78.2 bits (191), Expect = 1e-12
Identities = 47/132 (35%), Positives = 70/132 (53%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
L EE++ ++ +SP+V TY +I+ CK R+ EA + SS + P +N +IDGF
Sbjct: 377 LWEEMKVRN-LSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGF 435
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
KAG + A I +M PD ITFT LI C G++ + + +++M N P+E
Sbjct: 436 CKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDE 495
Query: 361 YTYAILIGALCK 396
T LI L K
Sbjct: 496 ITINSLISCLLK 507
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/130 (28%), Positives = 64/130 (49%)
Frame = +1
Query: 25 DDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIAS 204
D I PD ++S Y ++G+++ A +E+ GIK + +N L++ K +
Sbjct: 138 DGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDE 197
Query: 205 AVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIG 384
AV ++ + L F PDV +F LI CR G++D+ + M FP+ +Y LI
Sbjct: 198 AVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLIN 257
Query: 385 ALCKENRLQE 414
C+ N + +
Sbjct: 258 GFCRVNEISK 267
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +1
Query: 31 ISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAV 210
+SP V Y ++++ K ++EA ++F E P+ +FN+LI G + G I A
Sbjct: 177 VSPFV--YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAF 234
Query: 211 TIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGL-MLWHEMKRRNLFPNEYTYAILIGA 387
++ M +FG PD++++ +LI+ +CR ++ +G +L +M + + P+ TY +I
Sbjct: 235 EFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISG 294
Query: 388 LCK 396
CK
Sbjct: 295 YCK 297
Score = 67.0 bits (162), Expect = 3e-09
Identities = 32/94 (34%), Positives = 51/94 (54%)
Frame = +1
Query: 28 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 207
++ P Y VI G+CK G+++EA+ + EM +P+ ITF +LI G G + A
Sbjct: 420 EVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEA 479
Query: 208 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQ 309
++ + KM+ PD IT SLI +AG ++
Sbjct: 480 ISTFYKMIEINCVPDEITINSLISCLLKAGMPNE 513
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/116 (26%), Positives = 59/116 (50%)
Frame = +1
Query: 49 TYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKM 228
TY ++ CK+G + A +VFD M S GI P++ +L+ + + G + SA ++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 229 LSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
+G + +L++ + VD+ ++L+ E P+ Y++ ILI LC+
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226
>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 198 bits (504), Expect = 6e-49
Identities = 91/138 (65%), Positives = 115/138 (83%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL+E+ +K+D+SPDVVTYTS+ISGYCKLG+ME+AS++F+ M SSGIKPN TFN+LI+GF
Sbjct: 294 LLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGF 353
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK G++ SA +YE+ML G PD+ITFTSLID +CR G+V++ L LWHE+ RNL PNE
Sbjct: 354 GKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNE 413
Query: 361 YTYAILIGALCKENRLQE 414
YT+AIL ALCKENRL E
Sbjct: 414 YTFAILTNALCKENRLHE 431
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +1
Query: 25 DDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIAS 204
D + +V Y +++ + +++EA F E ++ +FN+LI G + G +
Sbjct: 196 DGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDK 255
Query: 205 AVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRN-LFPNEYTYAILI 381
A ++ +M FG PDVIT+ +LI+ +CR +VD+G L E+ +N L P+ TY +I
Sbjct: 256 AFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSII 315
Query: 382 GALCKENRLQE 414
CK ++++
Sbjct: 316 SGYCKLGKMEK 326
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/86 (40%), Positives = 52/86 (60%)
Frame = +1
Query: 52 YTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKML 231
Y VI G+CK G ++EA+V+ EM KP+ IT+ +LI G G ++ A++I+ +ML
Sbjct: 451 YNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRML 510
Query: 232 SFGFHPDVITFTSLIDAYCRAGQVDQ 309
G PD IT TSLI +AG ++
Sbjct: 511 GTGCAPDSITMTSLISCLLKAGMPNE 536
Score = 72.8 bits (177), Expect = 5e-11
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 35/155 (22%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVL---------------- 168
PD++T+TS+I G+C+ G++E + ++ E+ + + PN TF +L
Sbjct: 376 PDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGF 435
Query: 169 -------------------IDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCR 291
IDGF KAGN+ A I +M PD IT+T LI +C
Sbjct: 436 LRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCM 495
Query: 292 AGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
G++ + + +++ M P+ T LI L K
Sbjct: 496 KGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLK 530
>ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508782996|gb|EOY30252.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 592
Score = 192 bits (488), Expect = 4e-47
Identities = 92/138 (66%), Positives = 110/138 (79%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL ++Q++DD SPDVVTYTSVISGYCKLG+M+EAS +F EM SSG P +TFNVLIDGF
Sbjct: 315 LLNQVQSRDDCSPDVVTYTSVISGYCKLGKMDEASALFHEMISSGTVPTVVTFNVLIDGF 374
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK G++ SA ++YE+M SFG DV+TFTSLID YCR G V+Q L LW+ MK R+L PN
Sbjct: 375 GKVGDMVSAKSMYEQMASFGCIADVVTFTSLIDGYCRIGDVNQSLQLWNTMKGRDLSPNV 434
Query: 361 YTYAILIGALCKENRLQE 414
YT+AI I ALCKENRL E
Sbjct: 435 YTFAITINALCKENRLHE 452
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/123 (35%), Positives = 65/123 (52%)
Frame = +1
Query: 28 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 207
D+SP+V T+ I+ CK R+ EA E+ I P FN +IDGF KAGN+ A
Sbjct: 429 DLSPNVYTFAITINALCKENRLHEARGFLRELQCRNIVPKPFIFNPVIDGFCKAGNLDEA 488
Query: 208 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGA 387
I +M HPD +TFT LI +C G++ + + ++++M P++ T LI
Sbjct: 489 NLIVAEMEEKQCHPDKVTFTILIIGHCMKGRMFEAISIFNKMLSVGCTPDDVTVNSLISC 548
Query: 388 LCK 396
L K
Sbjct: 549 LLK 551
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/139 (28%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL ++Q+ D++ + ++++ K ++EEA ++ E S P+ TFN+LI G
Sbjct: 210 LLADVQS-DEVVISIFALNNLLNMMVKQNKLEEAVSLYKENLGSNFYPDAWTFNILIRGL 268
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRR-NLFPN 357
+ G + A ++ M SFG PD++T+ ++I+ C+ +VD+G L ++++ R + P+
Sbjct: 269 CRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDRGHKLLNQVQSRDDCSPD 328
Query: 358 EYTYAILIGALCKENRLQE 414
TY +I CK ++ E
Sbjct: 329 VVTYTSVISGYCKLGKMDE 347
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/125 (29%), Positives = 67/125 (53%)
Frame = +1
Query: 40 DVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIY 219
DVVT+TS+I GYC++G + ++ +++ M + PN TF + I+ K + A
Sbjct: 398 DVVTFTSLIDGYCRIGDVNQSLQLWNTMKGRDLSPNVYTFAITINALCKENRLHEARGFL 457
Query: 220 EKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKE 399
++ P F +ID +C+AG +D+ ++ EM+ + P++ T+ ILI C +
Sbjct: 458 RELQCRNIVPKPFIFNPVIDGFCKAGNLDEANLIVAEMEEKQCHPDKVTFTILIIGHCMK 517
Query: 400 NRLQE 414
R+ E
Sbjct: 518 GRMFE 522
Score = 76.6 bits (187), Expect = 3e-12
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Frame = +1
Query: 4 LEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFG 183
LE + +I+ TY ++ +C +G + A +VFD M G P+T +I FG
Sbjct: 140 LEFSRVNFNIAHSFWTYNLLMRSFCHMGLHDSAKLVFDYMRIDGHLPDTTILGFMISSFG 199
Query: 184 KAGN-----------------------------------IASAVTIYEKMLSFGFHPDVI 258
+AG + AV++Y++ L F+PD
Sbjct: 200 RAGEFGMAKKLLADVQSDEVVISIFALNNLLNMMVKQNKLEEAVSLYKENLGSNFYPDAW 259
Query: 259 TFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRL 408
TF LI CR G+VDQ L+++M FP+ TY +I LCK N +
Sbjct: 260 TFNILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEV 309
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/98 (37%), Positives = 56/98 (57%)
Frame = +1
Query: 4 LEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFG 183
L E+Q ++ I P + VI G+CK G ++EA+++ EM P+ +TF +LI G
Sbjct: 457 LRELQCRN-IVPKPFIFNPVIDGFCKAGNLDEANLIVAEMEEKQCHPDKVTFTILIIGHC 515
Query: 184 KAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAG 297
G + A++I+ KMLS G PD +T SLI +AG
Sbjct: 516 MKGRMFEAISIFNKMLSVGCTPDDVTVNSLISCLLKAG 553
>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Citrus sinensis]
gi|568841566|ref|XP_006474729.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Citrus sinensis]
Length = 595
Score = 191 bits (484), Expect = 1e-46
Identities = 90/138 (65%), Positives = 114/138 (82%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL+E++ K + SPDVVTYTSVISGYCKLG+M++A+ +++EM S GIKP+ +TFNVLIDGF
Sbjct: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK GN+ SA + E+MLSFG+ PDV+TF+SLID YCR GQ++QGL L EMK +NL PN
Sbjct: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
Query: 361 YTYAILIGALCKENRLQE 414
YT+ ILI ALCKENRL +
Sbjct: 438 YTFTILINALCKENRLND 455
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/126 (31%), Positives = 69/126 (54%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PDVVT++S+I GYC+ G++ + + DEM + PN TF +LI+ K + A
Sbjct: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
+++ P + +ID +C+AG VD+ ++ EM+ + P++ T+ ILI C
Sbjct: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
Query: 397 ENRLQE 414
+ R+ E
Sbjct: 520 KGRMVE 525
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +1
Query: 28 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 207
+++ Y S+++ K +EA +F E +P+T TFN+LI G + G + A
Sbjct: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
Query: 208 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLF-PNEYTYAILIG 384
+ M SFG PD++T+ +LI CR +V +G L E+K ++ F P+ TY +I
Sbjct: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
Query: 385 ALCKENRLQE 414
CK ++ +
Sbjct: 341 GYCKLGKMDK 350
Score = 75.9 bits (185), Expect = 6e-12
Identities = 42/132 (31%), Positives = 73/132 (55%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
L +E++ K+ +SP+V T+T +I+ CK R+ +A ++ + + P +N +IDGF
Sbjct: 424 LCDEMKGKN-LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
KAGN+ A I +M PD +TFT LI +C G++ + + ++++M P++
Sbjct: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLTIGCAPDD 542
Query: 361 YTYAILIGALCK 396
T LI L K
Sbjct: 543 ITVNSLISCLLK 554
Score = 75.9 bits (185), Expect = 6e-12
Identities = 36/99 (36%), Positives = 55/99 (55%)
Frame = +1
Query: 25 DDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIAS 204
+D+ P Y VI G+CK G ++EA+V+ EM KP+ +TF +LI G G +
Sbjct: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
Query: 205 AVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLML 321
A++I+ KML+ G PD IT SLI + G ++ +
Sbjct: 526 AISIFNKMLTIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
>ref|XP_006381622.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550336330|gb|ERP59419.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 511
Score = 191 bits (484), Expect = 1e-46
Identities = 91/138 (65%), Positives = 108/138 (78%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
L +EIQ++ D SPD+VTYTS+ISG+CK G+M+EAS +F+EM SGI+PN ITFNVLIDGF
Sbjct: 234 LFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGF 293
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK GNIA A +Y KM F DV+TFTSLID YCRAGQV+ GL W+ MK RN+ P
Sbjct: 294 GKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTV 353
Query: 361 YTYAILIGALCKENRLQE 414
YTYA+LI ALCKENRL E
Sbjct: 354 YTYAVLINALCKENRLNE 371
Score = 82.8 bits (203), Expect = 5e-14
Identities = 46/139 (33%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL E+Q K+ + + Y +++S K ++ EA +F E + P+T TFN+LI G
Sbjct: 130 LLAEVQGKE-VRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLAMQ-SPDTWTFNILIRGL 187
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMK-RRNLFPN 357
+ G + A +++ M SFG PDV+T+ +LI+ C+A +V +G L+ E++ R + P+
Sbjct: 188 CRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPD 247
Query: 358 EYTYAILIGALCKENRLQE 414
TY +I CK +++E
Sbjct: 248 IVTYTSIISGFCKSGKMKE 266
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/129 (31%), Positives = 69/129 (53%)
Frame = +1
Query: 28 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 207
D S DVVT+TS+I GYC+ G++ ++ M + + P T+ VLI+ K + A
Sbjct: 313 DCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEA 372
Query: 208 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGA 387
++ + P + +ID +C+AG VD+G ++ EM+ + P++ T+ ILI
Sbjct: 373 RDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIG 432
Query: 388 LCKENRLQE 414
C + R+ E
Sbjct: 433 HCVKGRMFE 441
Score = 75.1 bits (183), Expect = 9e-12
Identities = 41/123 (33%), Positives = 64/123 (52%)
Frame = +1
Query: 28 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 207
++SP V TY +I+ CK R+ EA ++ +S I P +N +IDGF KAGN+
Sbjct: 348 NVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEG 407
Query: 208 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGA 387
I ++M PD +TFT LI +C G++ + + +++ M P+ T LI
Sbjct: 408 NVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISC 467
Query: 388 LCK 396
L K
Sbjct: 468 LLK 470
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Frame = +1
Query: 31 ISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAV 210
I P Y VI G+CK G ++E +V+ EM P+ +TF +LI G G + A+
Sbjct: 384 IIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAI 443
Query: 211 TIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWH-EMKRRNLFPNEYTYAI 375
I+ +ML+ PD IT SLI +AG ++ + ++ RNL + + AI
Sbjct: 444 NIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNLGLSSFEKAI 499
>gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]
Length = 570
Score = 190 bits (483), Expect = 2e-46
Identities = 89/138 (64%), Positives = 109/138 (78%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL E+Q + D SP+V T+TSVI GYCKLGRMEEAS +FDEM SG +P T+TFNVLID F
Sbjct: 294 LLREVQLRGDFSPNVRTFTSVILGYCKLGRMEEASALFDEMMDSGTRPTTVTFNVLIDAF 353
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
K G++ASA+ +YEKML G+ PDV+TFTSLID YCR GQ+++GL LW EM RN+ PN
Sbjct: 354 SKVGDMASAIALYEKMLFHGYRPDVVTFTSLIDGYCRVGQLNRGLKLWCEMSVRNVSPNG 413
Query: 361 YTYAILIGALCKENRLQE 414
YTY+++I ALCK NRL E
Sbjct: 414 YTYSVVIHALCKVNRLHE 431
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/124 (31%), Positives = 69/124 (55%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PDVVT+TS+I GYC++G++ ++ EM+ + PN T++V+I K + A +
Sbjct: 376 PDVVTFTSLIDGYCRVGQLNRGLKLWCEMSVRNVSPNGYTYSVVIHALCKVNRLHEARDL 435
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
++ P + +ID +C+AG VD+ M+ EM+ + P++ T+ ILI C
Sbjct: 436 LRQLNCTNIVPKPFMYNPVIDGFCKAGNVDEANMIVAEMEEKRCNPDKMTFTILILGNCM 495
Query: 397 ENRL 408
+ R+
Sbjct: 496 KGRM 499
Score = 79.3 bits (194), Expect = 5e-13
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LLEEI+A + Y+S+ + K ++ EA +F + S P+T TFN+LI G
Sbjct: 194 LLEEIRASKFV------YSSLFNVLVKNNKVYEAVCLFRKQIGSHFVPDTWTFNILIGGL 247
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLF-PN 357
G + SA + M F PDV+T+ +LI CR +VD+G L E++ R F PN
Sbjct: 248 CGVGEVHSAFEFFNDMGKFRCSPDVVTYNTLISGLCRTNEVDRGCDLLREVQLRGDFSPN 307
Query: 358 EYTYAILIGALCKENRLQE 414
T+ +I CK R++E
Sbjct: 308 VRTFTSVILGYCKLGRMEE 326
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/123 (32%), Positives = 66/123 (53%)
Frame = +1
Query: 28 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 207
++SP+ TY+ VI CK+ R+ EA + ++ + I P +N +IDGF KAGN+ A
Sbjct: 408 NVSPNGYTYSVVIHALCKVNRLHEARDLLRQLNCTNIVPKPFMYNPVIDGFCKAGNVDEA 467
Query: 208 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGA 387
I +M +PD +TFT LI C G++ + ++++M P++ T L+
Sbjct: 468 NMIVAEMEEKRCNPDKMTFTILILGNCMKGRMVDAIGVFYKMLAVGCAPDKITVHCLMSC 527
Query: 388 LCK 396
L K
Sbjct: 528 LLK 530
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/94 (34%), Positives = 51/94 (54%)
Frame = +1
Query: 28 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 207
+I P Y VI G+CK G ++EA+++ EM P+ +TF +LI G G + A
Sbjct: 443 NIVPKPFMYNPVIDGFCKAGNVDEANMIVAEMEEKRCNPDKMTFTILILGNCMKGRMVDA 502
Query: 208 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQ 309
+ ++ KML+ G PD IT L+ +AG ++
Sbjct: 503 IGVFYKMLAVGCAPDKITVHCLMSCLLKAGMPNE 536
>ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Fragaria vesca subsp. vesca]
Length = 583
Score = 190 bits (483), Expect = 2e-46
Identities = 87/138 (63%), Positives = 110/138 (79%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL E+Q + ++SPDV+T+TSVISGYCKLGRMEEAS +FDEM G+KP +TFN LIDG+
Sbjct: 307 LLREVQFRSELSPDVITFTSVISGYCKLGRMEEASAIFDEMIGCGLKPTAVTFNALIDGY 366
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GKAG+++SA ++YE ML G DVITFTSLID YCRAG ++ GL LWHEM +N+ P+
Sbjct: 367 GKAGDMSSAFSLYESMLFHGHCADVITFTSLIDGYCRAGHLNHGLQLWHEMNAKNVSPSA 426
Query: 361 YTYAILIGALCKENRLQE 414
YT+++LI ALCK NRL E
Sbjct: 427 YTFSVLINALCKGNRLCE 444
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Frame = +1
Query: 52 YTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKML 231
Y ++ + KL R++EA +F + S P++ TFN+LI G + G + + + M
Sbjct: 218 YNNLFNVLVKLNRVDEAVCLFRKYVGSYCCPDSWTFNILIRGLCRTGAVDKGLEFFSDMR 277
Query: 232 SFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMK-RRNLFPNEYTYAILIGALCKENRL 408
SFG P+V+T+ +LI CRA +VD+G L E++ R L P+ T+ +I CK R+
Sbjct: 278 SFGCSPNVVTYNTLISGLCRAHEVDRGCDLLREVQFRSELSPDVITFTSVISGYCKLGRM 337
Query: 409 QE 414
+E
Sbjct: 338 EE 339
Score = 79.0 bits (193), Expect = 7e-13
Identities = 36/125 (28%), Positives = 65/125 (52%)
Frame = +1
Query: 40 DVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIY 219
DV+T+TS+I GYC+ G + ++ EM + + P+ TF+VLI+ K + A +
Sbjct: 390 DVITFTSLIDGYCRAGHLNHGLQLWHEMNAKNVSPSAYTFSVLINALCKGNRLCEARDLL 449
Query: 220 EKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKE 399
++ P + +ID C+AG +D+ ++ EM+ + P+ T+ ILI +
Sbjct: 450 RELKGSNVVPKSFLYNPVIDGLCKAGNIDEANLIVAEMEEKKCTPDRVTFTILILGNSMK 509
Query: 400 NRLQE 414
R+ E
Sbjct: 510 GRMSE 514
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/99 (37%), Positives = 54/99 (54%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL E++ + + P Y VI G CK G ++EA+++ EM P+ +TF +LI G
Sbjct: 448 LLRELKGSN-VVPKSFLYNPVIDGLCKAGNIDEANLIVAEMEEKKCTPDRVTFTILILGN 506
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAG 297
G ++ A+ + KMLS G PD IT SLI +AG
Sbjct: 507 SMKGRMSEAIGNFSKMLSIGCAPDKITIDSLISCLSKAG 545
Score = 68.9 bits (167), Expect = 7e-10
Identities = 39/136 (28%), Positives = 66/136 (48%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
L+ + D +SP+ ++S ++GR + A + DE+ S + ++ +N L +
Sbjct: 166 LVFDYMRTDGLSPNESVLEFLVSSCAQMGRSDLAEKILDEVHCSVVGLSSFVYNNLFNVL 225
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
K + AV ++ K + PD TF LI CR G VD+GL + +M+ PN
Sbjct: 226 VKLNRVDEAVCLFRKYVGSYCCPDSWTFNILIRGLCRTGAVDKGLEFFSDMRSFGCSPNV 285
Query: 361 YTYAILIGALCKENRL 408
TY LI LC+ + +
Sbjct: 286 VTYNTLISGLCRAHEV 301
Score = 65.9 bits (159), Expect = 6e-09
Identities = 43/132 (32%), Positives = 67/132 (50%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
L E+ AK+ +SP T++ +I+ CK R+ EA + E+ S + P + +N +IDG
Sbjct: 413 LWHEMNAKN-VSPSAYTFSVLINALCKGNRLCEARDLLRELKGSNVVPKSFLYNPVIDGL 471
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
KAGNI A I +M PD +TFT LI G++ + + + +M P++
Sbjct: 472 CKAGNIDEANLIVAEMEEKKCTPDRVTFTILILGNSMKGRMSEAIGNFSKMLSIGCAPDK 531
Query: 361 YTYAILIGALCK 396
T LI L K
Sbjct: 532 ITIDSLISCLSK 543
>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
gi|557556032|gb|ESR66046.1| hypothetical protein
CICLE_v10007804mg [Citrus clementina]
Length = 595
Score = 188 bits (477), Expect = 8e-46
Identities = 89/138 (64%), Positives = 113/138 (81%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL+E++ K + PDVVTYTSVISGYCKLG+M++A+ +++EM S GIKP+ +TFNVLIDGF
Sbjct: 318 LLKEVKFKSEFLPDVVTYTSVISGYCKLGKMDKATSIYNEMNSCGIKPSAVTFNVLIDGF 377
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK GN+ SA + E+MLS G+ PDV+TF+SLID YCR GQ++QGL L EMK +NL PN
Sbjct: 378 GKVGNMVSAEYMRERMLSLGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
Query: 361 YTYAILIGALCKENRLQE 414
YT+AILI ALCKENRL +
Sbjct: 438 YTFAILINALCKENRLND 455
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/126 (31%), Positives = 69/126 (54%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PDVVT++S+I GYC+ G++ + + DEM + PN TF +LI+ K + A
Sbjct: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFAILINALCKENRLNDARRF 459
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
+++ P + +ID +C+AG VD+ ++ EM+ + P++ T+ ILI C
Sbjct: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
Query: 397 ENRLQE 414
+ R+ E
Sbjct: 520 KGRMVE 525
Score = 75.1 bits (183), Expect = 9e-12
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +1
Query: 28 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 207
+++ Y S+++ K +EA +F E +P+T TFN+LI G + G + A
Sbjct: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIRGLCRIGEVKKA 280
Query: 208 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLF-PNEYTYAILIG 384
+ M SFG PD++T+ +LI CR +V +G L E+K ++ F P+ TY +I
Sbjct: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTYTSVIS 340
Query: 385 ALCKENRLQE 414
CK ++ +
Sbjct: 341 GYCKLGKMDK 350
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +1
Query: 25 DDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIAS 204
+D+ P Y VI G+CK G ++EA+V+ EM KP+ +TF +LI G G +
Sbjct: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
Query: 205 AVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLML 321
A++I+ KML G PD IT SLI + G ++ +
Sbjct: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum tuberosum]
gi|565370447|ref|XP_006351832.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum tuberosum]
Length = 550
Score = 186 bits (472), Expect = 3e-45
Identities = 87/138 (63%), Positives = 110/138 (79%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL ++ +D +SPDVVTYTSVI+GYCKLGRM+EA + DEMT+ GI PN +TFN+LI+GF
Sbjct: 272 LLGNLELQDGLSPDVVTYTSVIAGYCKLGRMDEAINLMDEMTTYGISPNLVTFNILINGF 331
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK G++ SA+ +Y +M + G+ PDV+TFTSLID YCR G++DQGL LW EM RNL PN
Sbjct: 332 GKIGDMFSAIQMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEMNTRNLSPNL 391
Query: 361 YTYAILIGALCKENRLQE 414
YT++ILI AL KENRL E
Sbjct: 392 YTFSILISALSKENRLNE 409
Score = 80.5 bits (197), Expect = 2e-13
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 36/162 (22%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLI--------------- 171
PDVVT+TS+I GYC+ G +++ ++DEM + + PN TF++LI
Sbjct: 354 PDVVTFTSLIDGYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEAREL 413
Query: 172 ---------------------DGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYC 288
DGF KAGN++ A I +M S G D ITFT LI +C
Sbjct: 414 LRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSKANVIAAEMESRGCCHDKITFTILILGHC 473
Query: 289 RAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQE 414
G++ + + ++ +M P++ T + L L K ++E
Sbjct: 474 MKGRMLEAMAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKE 515
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/103 (38%), Positives = 60/103 (58%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL +++++DDI P Y V+ G+CK G + +A+V+ EM S G + ITF +LI G
Sbjct: 413 LLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSKANVIAAEMESRGCCHDKITFTILILGH 472
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQ 309
G + A+ I++KMLS G PD IT + L +AG V +
Sbjct: 473 CMKGRMLEAMAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKE 515
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Frame = +1
Query: 52 YTSVISGYCKLGRMEEASVVFDE--MTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEK 225
+ S++S K R++EA F + S + P+T TFN +I G + G + A +
Sbjct: 181 HNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFND 240
Query: 226 MLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRN-LFPNEYTYAILIGALCKEN 402
M SFG PD +T+ +LI+ C GQV++ L ++ ++ L P+ TY +I CK
Sbjct: 241 MGSFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKLG 300
Query: 403 RLQE 414
R+ E
Sbjct: 301 RMDE 304
>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Solanum lycopersicum]
Length = 550
Score = 182 bits (462), Expect = 4e-44
Identities = 85/138 (61%), Positives = 108/138 (78%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL +Q +D +SPDVVTYTS+ISGYCKL RM+EA + DEM + GI PN +TFN+LI+GF
Sbjct: 272 LLGNLQLQDGLSPDVVTYTSLISGYCKLSRMDEAINLMDEMITYGISPNLVTFNILINGF 331
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK G++ SA+ +Y KM + G+ PDV+TFTSLID YCR G++DQGL LW +M RNL PN
Sbjct: 332 GKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNL 391
Query: 361 YTYAILIGALCKENRLQE 414
YT+++LI AL KENRL E
Sbjct: 392 YTFSVLISALSKENRLNE 409
Score = 81.6 bits (200), Expect = 1e-13
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 36/162 (22%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLI--------------- 171
PDVVT+TS+I GYC+ G +++ ++D+M S + PN TF+VLI
Sbjct: 354 PDVVTFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEAREL 413
Query: 172 ---------------------DGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYC 288
DGF KAGN++ A I +M S G D ITFT LI +C
Sbjct: 414 LRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHC 473
Query: 289 RAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQE 414
G++ + L ++ +M P++ T + L L K ++E
Sbjct: 474 MKGRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAGMVKE 515
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL +++++DDI P Y V+ G+CK G + EA+V+ EM S G + ITF +LI G
Sbjct: 413 LLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGH 472
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQ 309
G + A+ I++KMLS G PD IT + L +AG V +
Sbjct: 473 CMKGRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAGMVKE 515
>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 532
Score = 181 bits (458), Expect = 1e-43
Identities = 82/138 (59%), Positives = 110/138 (79%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL+E+Q+++D SPDV+TYTS+ISG+ KLG++E ASV+F+EM SGI+P +TFNVLIDGF
Sbjct: 255 LLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGF 314
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK GN+ +A ++EKM S+ PDV+TFTSLID YCR G + GL +W MK RN+ PN
Sbjct: 315 GKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNI 374
Query: 361 YTYAILIGALCKENRLQE 414
YTY+++I ALCK+NR+ E
Sbjct: 375 YTYSVIINALCKDNRIHE 392
Score = 84.3 bits (207), Expect = 2e-14
Identities = 43/137 (31%), Positives = 72/137 (52%)
Frame = +1
Query: 4 LEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFG 183
+ E A PDVVT+TS+I GYC+ G + V+D M + + PN T++V+I+
Sbjct: 326 MHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALC 385
Query: 184 KAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEY 363
K I A + ++ P + +ID +C+AG VD+ ++ EM+ + P++
Sbjct: 386 KDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKV 445
Query: 364 TYAILIGALCKENRLQE 414
T+ ILI C + R+ E
Sbjct: 446 TFTILIIGHCMKGRMVE 462
Score = 78.6 bits (192), Expect = 9e-13
Identities = 41/135 (30%), Positives = 71/135 (52%)
Frame = +1
Query: 10 EIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKA 189
++ ++SP++ TY+ +I+ CK R+ EA + ++ S + P +N +IDGF KA
Sbjct: 363 DVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKA 422
Query: 190 GNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTY 369
GN+ A I +M PD +TFT LI +C G++ + L ++ +M P+ T
Sbjct: 423 GNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITI 482
Query: 370 AILIGALCKENRLQE 414
+ L+ L K + E
Sbjct: 483 SSLVACLLKAGKPSE 497
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
L+ E+Q ++ V Y +++ K G++ EA +F E + PNT TFN+LI G
Sbjct: 150 LIIEVQGEEARISSFV-YNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGL 208
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRN-LFPN 357
+ G + ++ M SFG PDV+T+ +LI C+A ++D+ L E++ RN P+
Sbjct: 209 CRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPD 268
Query: 358 EYTYAILIGALCKENRLQ 411
TY +I K +L+
Sbjct: 269 VMTYTSIISGFRKLGKLE 286
Score = 67.0 bits (162), Expect = 3e-09
Identities = 32/116 (27%), Positives = 62/116 (53%)
Frame = +1
Query: 61 VISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFG 240
+++ + + G+ + A + E+ + ++ +N L++ K G + A+ ++++ L+F
Sbjct: 134 LVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFH 193
Query: 241 FHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRL 408
P+ TF LI CR G+V++G L++ M+ P+ TY LI LCK N L
Sbjct: 194 SPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANEL 249
>ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Capsella rubella]
gi|565479514|ref|XP_006297397.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
gi|482566105|gb|EOA30294.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
gi|482566106|gb|EOA30295.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
Length = 535
Score = 179 bits (454), Expect = 4e-43
Identities = 83/136 (61%), Positives = 104/136 (76%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
+L ++++ SPDVVTYTS+ISGYCK G+M+EA ++ D+M GI P TITFNVL+DG+
Sbjct: 264 MLNDVKSSSGCSPDVVTYTSMISGYCKAGKMQEAYLLLDDMLGLGIYPTTITFNVLVDGY 323
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
KAG + SA I KM+SFG PDV+TFTSLID YCRAGQV+QG LW EM + + PNE
Sbjct: 324 AKAGEMTSAEDIRGKMISFGCFPDVVTFTSLIDGYCRAGQVNQGFRLWEEMNAKGMLPNE 383
Query: 361 YTYAILIGALCKENRL 408
+TY+ILI ALCKEN L
Sbjct: 384 FTYSILINALCKENSL 399
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/126 (30%), Positives = 76/126 (60%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PDVVT+TS+I GYC+ G++ + +++EM + G+ PN T+++LI+ K ++ A +
Sbjct: 346 PDVVTFTSLIDGYCRAGQVNQGFRLWEEMNAKGMLPNEFTYSILINALCKENSLLKAREL 405
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
++ S + +ID +C+AG+V++ ++ EM+++ P++ T+ ILI C
Sbjct: 406 LGQLASKDIITKPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 465
Query: 397 ENRLQE 414
+ R+ E
Sbjct: 466 KGRMFE 471
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = +1
Query: 40 DVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA-VTI 216
D T+ +I G C +G+ E+A + EM+ G P+ +T+N LI GF K+ +A A +
Sbjct: 206 DTKTFNILIRGLCSVGKGEKALELLGEMSGFGCSPDIVTYNTLIKGFCKSNELAKANEML 265
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
+ S G PDV+T+TS+I YC+AG++ + +L +M ++P T+ +L+ K
Sbjct: 266 NDVKSSSGCSPDVVTYTSMISGYCKAGKMQEAYLLLDDMLGLGIYPTTITFNVLVDGYAK 325
Query: 397 ENRL 408
+
Sbjct: 326 AGEM 329
Score = 79.0 bits (193), Expect = 7e-13
Identities = 41/107 (38%), Positives = 63/107 (58%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL ++ +KD I+ + Y VI G+CK G++ EA+V+ +EM KP+ ITF +LI G
Sbjct: 405 LLGQLASKDIITKPFM-YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 463
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLML 321
G + AV+I+ KM++ G PD IT SL+ +AG ++ L
Sbjct: 464 CMKGRMFEAVSIFHKMVAIGCSPDKITVNSLLSCLLKAGMAEEAYHL 510
Score = 65.9 bits (159), Expect = 6e-09
Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 58 SVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSF 237
S+++ KL R+++A +FD+ +T TFN+LI G G A+ + +M F
Sbjct: 177 SLLNTLVKLDRVDDAMKLFDKHLRFQCCNDTKTFNILIRGLCSVGKGEKALELLGEMSGF 236
Query: 238 GFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRN-LFPNEYTYAILIGALCKENRLQE 414
G PD++T+ +LI +C++ ++ + + +++K + P+ TY +I CK ++QE
Sbjct: 237 GCSPDIVTYNTLIKGFCKSNELAKANEMLNDVKSSSGCSPDVVTYTSMISGYCKAGKMQE 296
>ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331650|gb|EFH62069.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 536
Score = 179 bits (454), Expect = 4e-43
Identities = 82/136 (60%), Positives = 104/136 (76%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
+ +++++ SPDVVTYTS+ISGYCK G+M+EASV+ D+M GI P +TFNVL+DG+
Sbjct: 263 MFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
KAG + +A I KM+SFG PDV+TFTSLID YCR GQV+QG LW EM R +FPN
Sbjct: 323 AKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNA 382
Query: 361 YTYAILIGALCKENRL 408
+TY+ILI ALCKENRL
Sbjct: 383 FTYSILINALCKENRL 398
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/126 (31%), Positives = 78/126 (61%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PDVVT+TS+I GYC++G++ + +++EM + G+ PN T+++LI+ K + A +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKAREL 404
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
++ S P + +ID +C+AG+V++ +++ EM+++ P++ T+ ILI C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 397 ENRLQE 414
+ R+ E
Sbjct: 465 KGRMFE 470
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +1
Query: 40 DVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIY 219
D T+ +I G C +G+ E+A + M+ G P+ +T+N LI GF K+ + A ++
Sbjct: 205 DTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMF 264
Query: 220 EKM-LSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
+ + S G PDV+T+TS+I YC+AG++ + +L +M R ++P T+ +L+ K
Sbjct: 265 DDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 397 ENRL 408
+
Sbjct: 325 AGEM 328
Score = 79.0 bits (193), Expect = 7e-13
Identities = 40/101 (39%), Positives = 56/101 (55%)
Frame = +1
Query: 19 AKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNI 198
A DI P Y VI G+CK G++ EA V+ +EM KP+ ITF +LI G G +
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 199 ASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLML 321
AV+I+ KM++ G PD IT +SL+ +AG + L
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Frame = +1
Query: 58 SVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSF 237
S+++ KL R+E+A +F+E +T TFN+LI G G AV + M F
Sbjct: 176 SLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGF 235
Query: 238 GFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRN-LFPNEYTYAILIGALCKENRLQE 414
G PD++T+ +LI +C++ ++ + ++ ++K + P+ TY +I CK ++QE
Sbjct: 236 GCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQE 295
>gb|EYU18527.1| hypothetical protein MIMGU_mgv1a003955mg [Mimulus guttatus]
Length = 552
Score = 173 bits (439), Expect = 2e-41
Identities = 79/138 (57%), Positives = 106/138 (76%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL EI+ + + S DVVTYTSVISGYCKLG+ + A+ +F+EM ++GI+PN TFN +IDGF
Sbjct: 277 LLREIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMINNGIRPNLFTFNAIIDGF 336
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
GK G +ASA +YE+M + GF PDV+TFTSLID +CR G + QG+ L +EM + + PN
Sbjct: 337 GKKGEVASASKMYERMTATGFRPDVVTFTSLIDGHCRCGDLGQGIHLLNEMNEKRVSPNV 396
Query: 361 YTYAILIGALCKENRLQE 414
+T+++LI ALCKENRL E
Sbjct: 397 FTFSVLISALCKENRLNE 414
Score = 79.3 bits (194), Expect = 5e-13
Identities = 43/117 (36%), Positives = 67/117 (57%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
LL +++ ++DI P Y VI GYCK G ++EA+ + EM + G + +TF +LI G
Sbjct: 418 LLNQLKWREDIVPPPFVYNPVIDGYCKAGNVDEANAIVAEMEAKGCVHDKMTFTILILGH 477
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLF 351
G + A+ +Y KMLS G PD IT +SLI +AG + +E++++ LF
Sbjct: 478 CMKGRMFEAIGMYNKMLSVGCVPDNITMSSLISCLRKAGMAREA----NEIEQKALF 530
Score = 71.6 bits (174), Expect = 1e-10
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMT-SSGIKPNTITFNVLIDG 177
LL E+ K +SP+V T++ +IS CK R+ EA + +++ I P +N +IDG
Sbjct: 383 LLNEMNEKR-VSPNVFTFSVLISALCKENRLNEARDLLNQLKWREDIVPPPFVYNPVIDG 441
Query: 178 FGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPN 357
+ KAGN+ A I +M + G D +TFT LI +C G++ + + ++++M P+
Sbjct: 442 YCKAGNVDEANAIVAEMEAKGCVHDKMTFTILILGHCMKGRMFEAIGMYNKMLSVGCVPD 501
Query: 358 EYTYAILIGALCKENRLQE 414
T + LI L K +E
Sbjct: 502 NITMSSLISCLRKAGMARE 520
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Frame = +1
Query: 7 EEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDE--MTSSGIKPNTITFNVLIDGF 180
E KD++ V Y + +S R+++A + F + P+T +FN+++ G
Sbjct: 172 EYCNEKDELVSSFV-YNNFLSMLTNKNRIDDAVLFFKSHILRLKSFCPDTCSFNIVMRGL 230
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
+A + A ++ M SF PD++T+ +LI+ CR G+VD+ L E+K ++ F +
Sbjct: 231 CRASKVDKAFEFFDVMRSFSCSPDLVTYNTLINGLCRVGKVDRAEELLREIKVQSEFSAD 290
Query: 361 -YTYAILIGALCK 396
TY +I CK
Sbjct: 291 VVTYTSVISGYCK 303
>ref|XP_004513678.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like, partial [Cicer arietinum]
Length = 355
Score = 172 bits (436), Expect = 4e-41
Identities = 83/131 (63%), Positives = 104/131 (79%)
Frame = +1
Query: 22 KDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIA 201
+ D +P+VV+YT +ISGYCKL +M+EAS +FDEM SGIKP+ FN LIDGF KAG++A
Sbjct: 135 ESDFAPNVVSYTILISGYCKLSKMKEASRIFDEMVRSGIKPSAPIFNALIDGFVKAGDMA 194
Query: 202 SAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILI 381
SA+ I++KM+ +G PDV+TFTSLID YCR GQVD GL LW EMK RN+ + YT++ILI
Sbjct: 195 SALGIHKKMILYGCTPDVVTFTSLIDGYCRVGQVDYGLELWREMKARNISESLYTFSILI 254
Query: 382 GALCKENRLQE 414
ALCK NRLQE
Sbjct: 255 SALCKCNRLQE 265
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/127 (29%), Positives = 68/127 (53%)
Frame = +1
Query: 34 SPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVT 213
+PDVVT+TS+I GYC++G+++ ++ EM + I + TF++LI K + A
Sbjct: 209 TPDVVTFTSLIDGYCRVGQVDYGLELWREMKARNISESLYTFSILISALCKCNRLQEAHE 268
Query: 214 IYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALC 393
+ + P + +ID YC++G VD+ + +M+ + P++ T+ ILI C
Sbjct: 269 LLRLLKQSDIVPKPFIYNPVIDGYCKSGNVDEANAIVVDMEEK-CKPDKLTFTILIIGHC 327
Query: 394 KENRLQE 414
+ R E
Sbjct: 328 MKGRAPE 334
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/122 (31%), Positives = 66/122 (54%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
L E++A++ IS + T++ +IS CK R++EA + + S I P +N +IDG+
Sbjct: 234 LWREMKARN-ISESLYTFSILISALCKCNRLQEAHELLRLLKQSDIVPKPFIYNPVIDGY 292
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
K+GN+ A I M PD +TFT LI +C G+ + + ++++M P++
Sbjct: 293 CKSGNVDEANAIVVDM-EEKCKPDKLTFTILIIGHCMKGRAPEAIRIFYKMLATGCSPDD 351
Query: 361 YT 366
T
Sbjct: 352 IT 353
>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 172 bits (436), Expect = 4e-41
Identities = 80/136 (58%), Positives = 100/136 (73%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
+ +++++ SPDVVTYTS+ISGYCK G+M EAS + D+M GI P +TFNVL+DG+
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
KAG + +A I KM+SFG PDV+TFTSLID YCR GQV QG LW EM R +FPN
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 361 YTYAILIGALCKENRL 408
+TY+ILI ALC ENRL
Sbjct: 383 FTYSILINALCNENRL 398
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/126 (30%), Positives = 76/126 (60%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PDVVT+TS+I GYC++G++ + +++EM + G+ PN T+++LI+ + A +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
++ S P + +ID +C+AG+V++ ++ EM+++ P++ T+ ILI C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 397 ENRLQE 414
+ R+ E
Sbjct: 465 KGRMFE 470
Score = 80.5 bits (197), Expect = 2e-13
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Frame = +1
Query: 19 AKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNI 198
A DI P Y VI G+CK G++ EA+V+ +EM KP+ ITF +LI G G +
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 199 ASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRR----NLFPNEYT 366
AV+I+ KM++ G PD IT +SL+ +AG + L +++ R+ N+ P E
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVVPPETK 527
Query: 367 YAILIGALC 393
A A C
Sbjct: 528 TANATLAAC 536
Score = 68.9 bits (167), Expect = 7e-10
Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 58 SVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSF 237
S+++ KL R+E+A +FDE +T TFN+LI G G A+ + M F
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 238 GFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNL-FPNEYTYAILIGALCKENRLQE 414
G PD++T+ +LI +C++ ++++ ++ ++K ++ P+ TY +I CK +++E
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
[Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 172 bits (436), Expect = 4e-41
Identities = 80/136 (58%), Positives = 100/136 (73%)
Frame = +1
Query: 1 LLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGF 180
+ +++++ SPDVVTYTS+ISGYCK G+M EAS + D+M GI P +TFNVL+DG+
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 181 GKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE 360
KAG + +A I KM+SFG PDV+TFTSLID YCR GQV QG LW EM R +FPN
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 361 YTYAILIGALCKENRL 408
+TY+ILI ALC ENRL
Sbjct: 383 FTYSILINALCNENRL 398
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/126 (30%), Positives = 76/126 (60%)
Frame = +1
Query: 37 PDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTI 216
PDVVT+TS+I GYC++G++ + +++EM + G+ PN T+++LI+ + A +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 217 YEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCK 396
++ S P + +ID +C+AG+V++ ++ EM+++ P++ T+ ILI C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 397 ENRLQE 414
+ R+ E
Sbjct: 465 KGRMFE 470
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/101 (39%), Positives = 57/101 (56%)
Frame = +1
Query: 19 AKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNI 198
A DI P Y VI G+CK G++ EA+V+ +EM KP+ ITF +LI G G +
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 199 ASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLML 321
AV+I+ KM++ G PD IT +SL+ +AG + L
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 68.9 bits (167), Expect = 7e-10
Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 58 SVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSF 237
S+++ KL R+E+A +FDE +T TFN+LI G G A+ + M F
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 238 GFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNL-FPNEYTYAILIGALCKENRLQE 414
G PD++T+ +LI +C++ ++++ ++ ++K ++ P+ TY +I CK +++E
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295