BLASTX nr result
ID: Paeonia23_contig00035554
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00035554
(480 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98439.1| retrotransposon protein, putative, Ty3-gypsy subc... 70 2e-24
gb|AAU44292.1| putative polyprotein [Oryza sativa Japonica Group] 69 4e-24
emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group] 71 4e-23
emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group] 70 9e-23
gb|AAX96704.1| retrotransposon protein, putative, Ty3-gypsy sub-... 70 9e-23
emb|CAE04199.2| OSJNBa0011E07.8 [Oryza sativa Japonica Group] 69 2e-22
gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-... 70 2e-22
gb|ABA93897.1| retrotransposon protein, putative, Ty3-gypsy subc... 67 2e-22
gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Jap... 70 3e-22
gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-... 67 3e-22
ref|XP_007028157.1| DNA/RNA polymerases superfamily protein [The... 70 3e-22
gb|AAX92979.1| retrotransposon protein, putative, Ty3-gypsy sub-... 68 3e-22
gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subc... 69 3e-22
emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group] 68 3e-22
gb|ABG66211.1| retrotransposon protein, putative, Ty3-gypsy subc... 66 4e-22
gb|AAM12313.1|AC091680_14 putative polyprotein [Oryza sativa Jap... 66 4e-22
gb|AAT77372.1| putative polyprotein [Oryza sativa Japonica Group... 70 8e-22
gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor] 65 8e-22
gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subc... 67 8e-22
gb|AAX95246.1| retrotransposon protein, putative, Ty3-gypsy sub-... 65 1e-21
>gb|ABA98439.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 70.1 bits (170), Expect(2) = 2e-24
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I+AR GEVAY+L LP +L +VHDVFHVS K L + + + ++ L +
Sbjct: 1659 FRITARRGEVAYQLELPASLGNVHDVFHVSQLKKSLRVPSEQANSEQIEVREDLTYVERP 1718
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
++ +R N+V++ VQWS++ E +A+WE ED + +P LF
Sbjct: 1719 VKILDTMERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDLF 1765
Score = 67.8 bits (164), Expect(2) = 2e-24
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y R DL+F VDD +YL+VTP++GV F KGKLAPRY+ PF
Sbjct: 1606 LKVAQSRQKSYADNRRRDLEFAVDDFVYLRVTPLRGVHRFQTKGKLAPRYVGPF 1659
>gb|AAU44292.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1816
Score = 69.3 bits (168), Expect(2) = 4e-24
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I+AR GEVAY+L LP +L ++HDVFHVS K L + + + ++ L +
Sbjct: 1698 FRIAARRGEVAYQLELPASLGNMHDVFHVSQLKKCLRVPSEQANSEQIEVREDLTYVERP 1757
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
++ +R N+V++ VQWS++ E +A+WE ED + +P LF
Sbjct: 1758 VKILDTMERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDLF 1804
Score = 67.8 bits (164), Expect(2) = 4e-24
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y R DL+F VDD +YL+VTP++GV F KGKLAPRY+ PF
Sbjct: 1645 LKVAQSRQKSYADNRRRDLEFTVDDFVYLRVTPLRGVHRFQTKGKLAPRYVGPF 1698
>emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
Length = 1470
Score = 71.2 bits (173), Expect(2) = 4e-23
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I+AR GEVAY+L LP N++ VH VFHVS K L + + +++ L
Sbjct: 1361 FQITARRGEVAYQLQLPENIAEVHPVFHVSQLKKCLRVPEEQAPLEEIHISNDLTYPEHP 1420
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
+ + KR +KV +M VQWS++ EA+A+WE E+ + +YP LF
Sbjct: 1421 IRILDEAEKRTRSKVWRMYKVQWSNHTEAEATWESEEFLRTEYPHLF 1467
Score = 62.4 bits (150), Expect(2) = 4e-23
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y TR +L+F+ D +YLKV+PM+G F KGKLAPRY+ PF
Sbjct: 1308 LKVAQSRQKSYADTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPF 1361
>emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
Length = 1470
Score = 70.1 bits (170), Expect(2) = 9e-23
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I+AR GEVAY+L LP N+ VH VFHVS K L + + +++ L
Sbjct: 1361 FQITARRGEVAYQLQLPENIVEVHPVFHVSQLKKCLRVPEEQAPLEEIHISNDLTYPEHP 1420
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
+ + KR +KV +M VQWS++ EA+A+WE E+ + +YP LF
Sbjct: 1421 IRILDEAEKRTRSKVWRMYKVQWSNHTEAEATWESEEFLRTEYPHLF 1467
Score = 62.4 bits (150), Expect(2) = 9e-23
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y TR +L+F+ D +YLKV+PM+G F KGKLAPRY+ PF
Sbjct: 1308 LKVAQSRQKSYADTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPF 1361
>gb|AAX96704.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550168|gb|ABA92965.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1212
Score = 70.1 bits (170), Expect(2) = 9e-23
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I+AR GEVAY+L LP N++ VH VFHVS K L + + +++ L
Sbjct: 1103 FQITARRGEVAYQLQLPENIADVHPVFHVSQLKKCLRVPEEQAPLKEIHISNDLTYPEHP 1162
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDNEAD-ASWELEDSIHNKYPQLF 478
+ + KR +KV +M +QWS++ AD A+WE E+ + +YP LF
Sbjct: 1163 VRILDEAEKRTRSKVWRMYKIQWSNHTADEATWESEEFLRTEYPHLF 1209
Score = 62.4 bits (150), Expect(2) = 9e-23
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y TR +L+F+ D +YLKV+PM+G F KGKLAPRY+ PF
Sbjct: 1050 LKVAQSRQKSYADTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPF 1103
>emb|CAE04199.2| OSJNBa0011E07.8 [Oryza sativa Japonica Group]
Length = 1251
Score = 69.3 bits (168), Expect(2) = 2e-22
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I AR GEVAY+L LP N++ VH VFHVS K L + +T +++ L
Sbjct: 1142 FQIIARRGEVAYQLQLPENIADVHPVFHVSQLKKCLRVPEEQATLEEIHISNDLTYPEHP 1201
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
+ + KR KV +M VQWS++ E +A+WE E+ + +YP LF
Sbjct: 1202 VRILDEAEKRTRTKVWRMYKVQWSNHTEDEATWESEEFLKTEYPHLF 1248
Score = 62.4 bits (150), Expect(2) = 2e-22
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y TR +L+F+ D +YLKV+PM+G F KGKLAPRY+ PF
Sbjct: 1089 LKVAQSRQKSYADTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPF 1142
>gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550403|gb|ABA93200.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1640
Score = 70.1 bits (170), Expect(2) = 2e-22
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I +R GEVAY+L LPP+++ +HDV HVS K L + + + ++ L +
Sbjct: 1522 FKIVSRRGEVAYQLELPPSMTGIHDVLHVSQLKKCLRVPMEEANPERIELQEDLTYVENP 1581
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSD-NEADASWELEDSIHNKYPQLF 478
E S + N+V++ VQWS+ +E +A+WE ED + + +P LF
Sbjct: 1582 VRILEVSERNTRNRVIRFCKVQWSNHSEEEATWEREDELKSAHPHLF 1628
Score = 61.2 bits (147), Expect(2) = 2e-22
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y R DL F+ D +YL+VTP++GV F KGKLAPR++ PF
Sbjct: 1469 LRVAQSRQKSYADNRRRDLTFEEGDFVYLRVTPLRGVHRFQTKGKLAPRFVGPF 1522
>gb|ABA93897.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 390
Score = 67.4 bits (163), Expect(2) = 2e-22
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I AR GEVAY+L LP N++ VH VFHVS K L + + +++ L
Sbjct: 281 FQIMARRGEVAYQLQLPENIADVHPVFHVSQLKRCLRVPEEQTPLEEIHISNDLTYPEHP 340
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
+ + KR KV +M VQWS++ E +A+WE E+ + +YP LF
Sbjct: 341 VRILDEAEKRTRTKVWRMYKVQWSNHTEDEATWESEEFLKTEYPHLF 387
Score = 63.9 bits (154), Expect(2) = 2e-22
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y TR DL+F+ D +YLKV+PM+G F KGKLAPRY+ PF
Sbjct: 228 LRIAQSRQKSYADTRRRDLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPF 281
>gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Japonica Group]
gi|22725924|gb|AAN04934.1| Putative polyprotein [Oryza
sativa Japonica Group] gi|31430228|gb|AAP52174.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1569
Score = 70.1 bits (170), Expect(2) = 3e-22
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I+AR GEVAY+L LP N++ VH VFHVS K L + +T +++ L
Sbjct: 1460 FQITARRGEVAYQLQLPENIADVHPVFHVSQLKKCLRVPEEQATLEEIHISNDLTYPEHL 1519
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
+ + K+ KV +M VQWS++ E +A+WE E+ + +YP LF
Sbjct: 1520 VRILDEAKKKTRTKVWRMYKVQWSNHTEDEATWESEEFLKTEYPHLF 1566
Score = 60.8 bits (146), Expect(2) = 3e-22
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y TR +L+ + D +YLKV+PM+G F KGKLAPRY+ PF
Sbjct: 1407 LKVAQSRQKSYADTRRRNLELKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVRPF 1460
>gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550206|gb|ABA93003.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1436
Score = 67.4 bits (163), Expect(2) = 3e-22
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I AR GEVAY+L LP N++ VH VFHVS K L + + +++ L
Sbjct: 1327 FQIIARRGEVAYQLQLPENIADVHPVFHVSQLKKCLRVPEEQAPLEEIHISNDLTYPEHP 1386
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
+ + KR KV +M VQWS++ E +A+WE E+ + +YP LF
Sbjct: 1387 VRILDEAEKRTRTKVWRMYKVQWSNHTEDEATWESEEFLETEYPHLF 1433
Score = 63.5 bits (153), Expect(2) = 3e-22
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y TR DL+F+ D +YLKV+PM+G F KGKLAPRY+ PF
Sbjct: 1274 LKVAQSRQKSYADTRRRDLEFKEGDYVYLKVSPMRGTKMFKVKGKLAPRYVGPF 1327
>ref|XP_007028157.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508716762|gb|EOY08659.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 937
Score = 70.1 bits (170), Expect(2) = 3e-22
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +1
Query: 7 TTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPFPYL 171
T QSR K+Y R DL+FQV D ++LKV+P KGV FGKKGKL+PRYI PF L
Sbjct: 750 TAQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEIL 804
Score = 60.8 bits (146), Expect(2) = 3e-22
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I +VG VAYRLALPP+LS++H VFHVS + Y H+I
Sbjct: 801 FEILEKVGVVAYRLALPPDLSNIHPVFHVSMLRK--------------YNPDPSHVI--- 843
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDNEA-DASWELEDSIHNKYPQLF 478
+K+L +K V V V W ++ + + +WE ED + K+P LF
Sbjct: 844 -----RQVKKLRSKDVASVKVLWRNHTSEEVTWEAEDEMRTKHPHLF 885
>gb|AAX92979.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
Length = 1074
Score = 67.8 bits (164), Expect(2) = 3e-22
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I+AR GEVAY+L LP N++ VH VFHVS K L + + +++ L
Sbjct: 965 FQITARRGEVAYQLQLPENIADVHPVFHVSQLKKCLPVPEEQAPLEEIHISNDLTYPEHP 1024
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
+ KR +KV +M VQWS++ E +A+WE E+ + +YP LF
Sbjct: 1025 IRILDEVEKRTRSKVWRMYKVQWSNHTEDEATWESEEFLRTEYPHLF 1071
Score = 63.2 bits (152), Expect(2) = 3e-22
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ TQSR K+Y TR DL+F+ D +YLKV+PM+G F KGKLAPRY PF
Sbjct: 912 LKVTQSRQKSYADTRRRDLEFKKRDYVYLKVSPMRGTKRFKVKGKLAPRYGGPF 965
>gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1030
Score = 68.9 bits (167), Expect(2) = 3e-22
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I AR GEVAY+L LP N++ VH VFHVS K L + +T +++ L
Sbjct: 921 FQIIARQGEVAYQLQLPENIADVHPVFHVSQLKKCLRVPEEQATLEEIHISNDLTYPEHP 980
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
+ + KR KV M VQWS++ E +A+WE E+ + +YP LF
Sbjct: 981 VRILDEAEKRTRTKVWHMYKVQWSNHTEDEATWESEEFLRTEYPHLF 1027
Score = 62.0 bits (149), Expect(2) = 3e-22
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y TR +L+F+ D +YLKV+P++G+ F KGKLAPRY+ PF
Sbjct: 868 LKVAQSRQKSYTDTRRRNLEFKEGDYVYLKVSPIRGIKRFKVKGKLAPRYVGPF 921
>emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group]
Length = 1470
Score = 68.2 bits (165), Expect(2) = 3e-22
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I AR GEVAY+L LP N++ VH VFHVS K L + + +++ L
Sbjct: 1361 FQIIARRGEVAYQLQLPENIADVHPVFHVSQLKKCLRVPEEQAPLEEVHISNDLTYPEHP 1420
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
+ + KR +KV +M VQWS++ E +A+WE E+ + +YP LF
Sbjct: 1421 IRILDEAAKRTRSKVWRMYKVQWSNHTEEEATWESEEFLRTEYPHLF 1467
Score = 62.4 bits (150), Expect(2) = 3e-22
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y TR +L+F+ D IYLKV+PM+G F KGKLAPRY+ PF
Sbjct: 1308 LKIAQSRQKSYADTRRRNLEFKEGDYIYLKVSPMRGTKRFKVKGKLAPRYVGPF 1361
>gb|ABG66211.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1666
Score = 66.2 bits (160), Expect(2) = 4e-22
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y R DL+F VDD +YL+VTP++GV F KGKLAPR++ PF
Sbjct: 1495 LKVAQSRQKSYADNRRRDLEFAVDDFVYLRVTPLRGVHRFQTKGKLAPRFVGPF 1548
Score = 63.9 bits (154), Expect(2) = 4e-22
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I AR GEVA +L LP +L +VHDVFHVS K L + + + ++ L +
Sbjct: 1548 FRIIARHGEVANQLELPASLGNVHDVFHVSQLKKCLRVLSEQADSEQIEVREYLTYVERP 1607
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
++ +R +V++ VQWS++ E +A+WE ED + +P LF
Sbjct: 1608 VKILDAMERRTRKRVIRFCKVQWSNHAEEEATWEREDELKAAHPDLF 1654
>gb|AAM12313.1|AC091680_14 putative polyprotein [Oryza sativa Japonica Group]
Length = 1453
Score = 66.2 bits (160), Expect(2) = 4e-22
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y R DL+F VDD +YL+VTP++GV F KGKLAPR++ PF
Sbjct: 1282 LKVAQSRQKSYADNRRRDLEFAVDDFVYLRVTPLRGVHRFQTKGKLAPRFVGPF 1335
Score = 63.9 bits (154), Expect(2) = 4e-22
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I AR GEVA +L LP +L +VHDVFHVS K L + + + ++ L +
Sbjct: 1335 FRIIARHGEVANQLELPASLGNVHDVFHVSQLKKCLRVLSEQADSEQIEVREYLTYVERP 1394
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
++ +R +V++ VQWS++ E +A+WE ED + +P LF
Sbjct: 1395 VKILDAMERRTRKRVIRFCKVQWSNHAEEEATWEREDELKAAHPDLF 1441
>gb|AAT77372.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51854392|gb|AAU10772.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1501
Score = 70.5 bits (171), Expect(2) = 8e-22
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
+ I R GEVAY+L LPPN+ +HDVFHVS K L + +++ + L +
Sbjct: 1383 YRILERRGEVAYQLELPPNMVGIHDVFHVSQLKKCLRVPEEQASSEHIDIQEDLTYVEKP 1442
Query: 341 TSTFESSIKRL*NKVVKMVNVQWS-DNEADASWELEDSIHNKYPQLF 478
E+S +R NKV++ VQWS +E +A+WE ED + +P LF
Sbjct: 1443 IRILETSERRTRNKVIRFCKVQWSHHSEEEATWEREDELKAAHPHLF 1489
Score = 58.9 bits (141), Expect(2) = 8e-22
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPFPYL 171
L+ QSR K+Y R +L F+ D +YL+VTP++GV F KGKLAPR++ P+ L
Sbjct: 1330 LRIAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRIL 1386
>gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
Length = 1484
Score = 65.5 bits (158), Expect(2) = 8e-22
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F + R GEVAYRL LP +LS VHDVFHVS K L + +L L +
Sbjct: 1377 FKVLERRGEVAYRLELPESLSGVHDVFHVSQLKKCLRVPEEQLPLEELSVKGDLTYEEYP 1436
Query: 341 TSTFESSIKRL*NKVVKMVNVQWS-DNEADASWELEDSIHNKYPQLF 478
E++ + ++V++M VQW+ +EA+A+WE ED + Y LF
Sbjct: 1437 VKILETAERVTRSRVIRMCKVQWNRHSEAEATWEREDDLRKSYSYLF 1483
Score = 63.9 bits (154), Expect(2) = 8e-22
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPFPYL 171
L+ QSR K+Y TR +L F+V D +YLKV+PM+ V F KGKL PRY+ PF L
Sbjct: 1324 LRVAQSRQKSYADTRRRELAFEVGDYVYLKVSPMRSVKRFNMKGKLVPRYVGPFKVL 1380
>gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 67.0 bits (162), Expect(2) = 8e-22
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I AR GEVAY+L LP N++ VH VFHVS K L ++ + +++ L
Sbjct: 1361 FQIIARRGEVAYQLQLPENIADVHPVFHVSQLKKCLRVSEEQAPLEEIHISNDLTYPKHP 1420
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
+ + KR +KV M VQWS++ E +A+WE E+ + +YP LF
Sbjct: 1421 IRILDEAEKRTRSKVWHMYKVQWSNHTEDEATWESEEFLRTEYPHLF 1467
Score = 62.4 bits (150), Expect(2) = 8e-22
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y TR +L+F+ D +YLKV+PM+G F KGKLAPRY+ PF
Sbjct: 1308 LKVAQSRQKSYADTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPF 1361
>gb|AAX95246.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550683|gb|ABA93480.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1311
Score = 64.7 bits (156), Expect(2) = 1e-21
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 161 FPISARVGEVAYRLALPPNLSHVHDVFHVSCSKNVLVITL**STTAKLYFMRMLHMI*FC 340
F I AR GEVAY+L LP ++S +HDVFH+S K L + + + L
Sbjct: 1193 FRIIARRGEVAYQLELPSSMSGIHDVFHISQLKKCLRVPEEETPLQSVELQPDLTYREVP 1252
Query: 341 TSTFESSIKRL*NKVVKMVNVQWSDN-EADASWELEDSIHNKYPQLF 478
E++ + +K +++ VQWS + EA+A+WE ED + ++P+LF
Sbjct: 1253 IKILETAERTTRSKTIRLCKVQWSHHTEAEATWEHEDDLKAEFPELF 1299
Score = 64.3 bits (155), Expect(2) = 1e-21
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +1
Query: 1 LQTTQSRHKNYIATR*CDLQFQVDDLIYLKVTPMKGVTHFGKKGKLAPRYIEPF 162
L+ QSR K+Y R DL F+ +D +YLKVTPM+G F KGKLAPRY+ PF
Sbjct: 1140 LKVAQSRQKSYADNRRRDLTFEKEDYVYLKVTPMRGTKRFQVKGKLAPRYVGPF 1193