BLASTX nr result

ID: Paeonia23_contig00034752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00034752
         (295 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301147.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07

>ref|XP_004301147.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Fragaria vesca subsp. vesca]
          Length = 643

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
 Frame = +1

Query: 34  QYRSLSPLRFEATKFSHIHTSQQSKDSLQHQ--REHQIQLFPNF----QMKRNELFSLMK 195
           Q+ ++S  R  +T  S   T+Q S D  Q Q   +HQ Q  P      Q +++ L SL+K
Sbjct: 16  QHHNISSTRLTSTFPSLFTTNQTSLDHSQIQTPHDHQNQTKPIIISYAQTRKDSLLSLIK 75

Query: 196 ATSRNSHLLQIHAYIIRTLLILDHDVSLHFLS 291
           + +  SHLLQIHA+I++T LILD  +  HFLS
Sbjct: 76  SCTHKSHLLQIHAHILQTSLILDSSICFHFLS 107


>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 16/109 (14%)
 Frame = +1

Query: 16  ISPLRRQYRSLSPLRFEATKFSHIHTSQQSKDSL--------------QHQR-EHQIQLF 150
           ++ + R +RS  P   ++T   ++ TS  S  SL               H+R +HQ    
Sbjct: 1   MTTISRIFRSGRPSLSDSTPGRYLSTSAFSTASLPFLDSEESPSTASENHRRLQHQTHPL 60

Query: 151 PNFQMK-RNELFSLMKATSRNSHLLQIHAYIIRTLLILDHDVSLHFLSR 294
           P  + +  N+L SL+K+ S+ +HLLQIHA+IIRT LI +H +SL FLSR
Sbjct: 61  PKSRDESENQLISLIKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSR 109


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