BLASTX nr result

ID: Paeonia23_contig00032669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00032669
         (613 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25128.3| unnamed protein product [Vitis vinifera]               67   5e-09
ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinif...    67   5e-09
ref|XP_006383058.1| hypothetical protein POPTR_0005s11160g [Popu...    61   3e-07
gb|EXB62124.1| F-box protein SKIP22 [Morus notabilis]                  57   3e-06

>emb|CBI25128.3| unnamed protein product [Vitis vinifera]
          Length = 508

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +3

Query: 354 SLIQGPEANFTESQTPDSDTQKDGSLMDIDAGSMTSIGKK-FSVSCFLRKVLERDGFGGN 530
           SL+   + N T+  +  +    +G +   D      + KK FS  CFLRKVL R+  G +
Sbjct: 127 SLVSDSKKNETQEFSGATSMDVEGGVAAADEDDEPIVVKKSFSEPCFLRKVL-REEVGDD 185

Query: 531 GNEYRLVVVAVHAVMLESGFVALDTVS 611
           GNE++L+V+AVHAVMLESGFV  D+VS
Sbjct: 186 GNEHKLLVIAVHAVMLESGFVGFDSVS 212


>ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinifera]
           gi|147804806|emb|CAN73524.1| hypothetical protein
           VITISV_010705 [Vitis vinifera]
          Length = 563

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +3

Query: 354 SLIQGPEANFTESQTPDSDTQKDGSLMDIDAGSMTSIGKK-FSVSCFLRKVLERDGFGGN 530
           SL+   + N T+  +  +    +G +   D      + KK FS  CFLRKVL R+  G +
Sbjct: 189 SLVSDSKKNETQEFSGATSMDVEGGVAAADEDDEPIVVKKSFSEPCFLRKVL-REEVGDD 247

Query: 531 GNEYRLVVVAVHAVMLESGFVALDTVS 611
           GNE++L+V+AVHAVMLESGFV  D+VS
Sbjct: 248 GNEHKLLVIAVHAVMLESGFVGFDSVS 274


>ref|XP_006383058.1| hypothetical protein POPTR_0005s11160g [Populus trichocarpa]
           gi|566170732|ref|XP_006383059.1| F-box family protein
           [Populus trichocarpa] gi|550338635|gb|ERP60855.1|
           hypothetical protein POPTR_0005s11160g [Populus
           trichocarpa] gi|550338636|gb|ERP60856.1| F-box family
           protein [Populus trichocarpa]
          Length = 545

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 34/93 (36%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
 Frame = +3

Query: 342 DIDDSLIQGPEANFTESQTPDS-DTQKDGSL--MDIDAGSMTSIGKKFSVSCFLRKVLER 512
           D++ ++ +G  A  +++++ ++ +TQ+  S+  MD+D GS+    K+FS   FLR++L +
Sbjct: 173 DMNGAVTEGHGALGSKTRSRETLETQELTSVEAMDVDPGSVDVGNKRFSEPYFLRRLLRK 232

Query: 513 DGFGGNGNEYRLVVVAVHAVMLESGFVALDTVS 611
           +  G +G+ Y+L+V+AVHAV +ESGFV  +++S
Sbjct: 233 E-LGDDGSNYKLLVIAVHAVFIESGFVGFNSIS 264


>gb|EXB62124.1| F-box protein SKIP22 [Morus notabilis]
          Length = 457

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = +3

Query: 423 GSLMDIDAGSMTSIGKKFSVSCFLRKV--LERDGFGGNGNEYRLVVVAVHAVMLESGFVA 596
           G  M+ID   +  +G KF  +CFLR+V  +  + FG +G  ++L+V+AVH+V LESGFV 
Sbjct: 125 GKSMEIDGDCVDFVGVKFPETCFLRRVRRMVSEEFGEDGRNHKLMVIAVHSVFLESGFVE 184

Query: 597 LD 602
            D
Sbjct: 185 FD 186


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