BLASTX nr result

ID: Paeonia23_contig00031801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00031801
         (426 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...    56   4e-06
ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus ...    56   4e-06
ref|XP_004230548.1| PREDICTED: KH domain-containing protein At4g...    55   8e-06

>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 648

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3   ILDVAEKNDGLGITSDCIVSCRLLMDVSQEALAMRMGSKAMEQDRMSWWNGIGVSSGEDF 182
           IL+VA   DG  +    +VSCRLL + SQ    +  G K +E+ R    + I V + E  
Sbjct: 135 ILEVAAVVDG--VPPGGVVSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKL 192

Query: 183 ---GGPNDIVMAIMGDVLTVKKSIVAVSCYLQANPPVDLQEMIRNSTLWKVLPLRAL 344
                  D ++ I GDVL VKK++VAVS  LQ  P VD  ++I    L +V+P ++L
Sbjct: 193 PTCAASTDEMVEIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPL-EVVPQQSL 248


>ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 698

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
 Frame = +3

Query: 3   ILDVAEKNDGLGITSDC--IVSCRLLMDVSQEALAMRMGSKAMEQDRMSWWNGIGVSSGE 176
           IL+VA ++DG+ + +    +VSCR+L    Q    +  G K +E+ R      I V + +
Sbjct: 138 ILEVAAESDGINVVAGGGGVVSCRMLAGSKQAGSVIGKGGKVVEKIRKDCGVKIRVLTDK 197

Query: 177 --DFGGPNDIVMAIMGDVLTVKKSIVAVSCYLQANPPVDLQEMIRNSTLWKVLPLRAL 344
                GPN+ ++ I GD+L+VKK+++AVS  LQ   PVD +  + +S  ++ +P   L
Sbjct: 198 LPVCAGPNEEMIEIEGDILSVKKALIAVSRCLQDCQPVD-KPRVGSSKYFEAVPQEPL 254


>ref|XP_004230548.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
           lycopersicum]
          Length = 646

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
 Frame = +3

Query: 3   ILDVAEKNDGLGITSDCIVSCRLLMDVSQEALAMRMGSKAMEQDRMSWWNGIGV---SSG 173
           +++V  +N+GL +  + +VSCRLL+  +Q    M  G K ++  R    NG  +   +SG
Sbjct: 133 VIEVTAENNGLVLGVENVVSCRLLVKGNQVGALMGKGGKVIDTIRRE--NGCRIKVLTSG 190

Query: 174 E--DFGGPNDIVMAIMGDVLTVKKSIVAVSCYLQANPPVDLQEMIRNSTL 317
           +      PND ++ I GD+L VKK++VAVS  LQ    V+    + N+ +
Sbjct: 191 KMPSCASPNDEIVEIEGDILAVKKALVAVSRRLQDCFSVERTRTVENAPI 240


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