BLASTX nr result
ID: Paeonia23_contig00031231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00031231
(639 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 278 1e-72
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 270 4e-70
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 259 6e-67
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 259 6e-67
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 258 8e-67
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 258 8e-67
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 258 1e-66
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 253 3e-65
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 253 3e-65
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 253 3e-65
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 253 3e-65
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 251 1e-64
gb|AFB73912.1| polyprotein [Citrus sinensis] 249 6e-64
gb|AFB73911.1| polyprotein [Citrus sinensis] 248 8e-64
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 248 1e-63
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 247 2e-63
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 246 5e-63
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 245 7e-63
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 245 9e-63
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 245 9e-63
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 278 bits (710), Expect = 1e-72
Identities = 135/213 (63%), Positives = 174/213 (81%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
WV+ KKEG SP E V++KAR+V +G+ Q+EG+DYNE+FSPVV+H+SIR+LLA+VA +LE
Sbjct: 839 WVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLE 898
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
QL+V T FLH L+EEIYMTQP GF+V GKE VCKL+K LYGLK SPRQ YKRFD +
Sbjct: 899 LEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSY 958
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ YTR+ +D CVY+ +L ++SFIYL+LYVD++LIA + KY I KLK LS EFEMKD
Sbjct: 959 MVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKD 1018
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG A+KILGMEI RDR +++++LSQ++Y+QKVL
Sbjct: 1019 LGAARKILGMEIIRDRERRKLFLSQRSYIQKVL 1051
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 270 bits (689), Expect = 4e-70
Identities = 136/213 (63%), Positives = 166/213 (77%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEGSPG-EDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W+Y KKEG PG E+ R KARLVVKG+ QKEGID+NE+FSPVV+H+SIR+LLA VA FDLE
Sbjct: 213 WIYKKKEGIPGVENPRCKARLVVKGFNQKEGIDFNEIFSPVVRHTSIRVLLAFVALFDLE 272
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
QL+V T FLH L+EEIYM Q GF GKE VC+L+K LYGLK +PRQ YKRF F
Sbjct: 273 LEQLDVKTAFLHGELEEEIYMEQSDGFIAPGKEHLVCRLKKSLYGLKQAPRQWYKRFHSF 332
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
MIGQ Y ++ +D C+YF+ Q SFIYLLLYVD++LIA+R K I KLK LS EF+MK+
Sbjct: 333 MIGQNYCKSQYDDCIYFQNFQNGSFIYLLLYVDDMLIASRDKSLIKKLKTELSNEFDMKE 392
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEIRRDR +++LSQ+ Y+++VL
Sbjct: 393 LGAAKKILGMEIRRDRQAGKLFLSQQKYIKRVL 425
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 259 bits (661), Expect = 6e-67
Identities = 131/213 (61%), Positives = 165/213 (77%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG SP ++ R+KARLV KGY+Q GID+N+VFSPVVKHSSIR LL++VA D E
Sbjct: 773 WIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYE 832
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q++V T FLH L+E+IYM QP GF V GKE VC+L+K LYGLK SPRQ YKRFD F
Sbjct: 833 LEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 892
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ QK+ R+++D CVY K+ + S IYLLLYVD++LIA + K I KLK +LS EFEMKD
Sbjct: 893 MLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKD 951
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI R+R +++LSQK Y++KVL
Sbjct: 952 LGAAKKILGMEITRERHSGKLYLSQKCYIEKVL 984
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 259 bits (661), Expect = 6e-67
Identities = 131/213 (61%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG SP ++ R+KARLV KGY+Q GID+N+VFSPVVKHSSIR LL +VA D E
Sbjct: 836 WIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYE 895
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q+NV T FLH L+E+IYM QP GF V GKE VC+L+K LYGLK SPRQ YKRFD F
Sbjct: 896 LEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 955
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ QK+ +++D CVY K+ + S IYLLLYVD++LIA + K I+KLK +LS EFEMKD
Sbjct: 956 MLSQKFRISNYDSCVYL-KVVDGSVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKD 1014
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI R+R +++LSQK Y++KVL
Sbjct: 1015 LGAAKKILGMEITRERHSGKLYLSQKGYIEKVL 1047
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 258 bits (660), Expect = 8e-67
Identities = 130/213 (61%), Positives = 165/213 (77%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG SP ++ R+KARLV KGY+Q GID+N++FSPVVKHSSIR LL++VA D E
Sbjct: 622 WIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYE 681
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q++V T FLH L+E+IYM QP GF V GKE VC+L+K LYGLK SPRQ YKRFD F
Sbjct: 682 LEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 741
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ QK+ R+++D CVY K+ + S IYLLLYVD++LIA + K I KLK +LS EFEMKD
Sbjct: 742 MLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKD 800
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI R+R +++LSQK Y++KVL
Sbjct: 801 LGAAKKILGMEITRERHSDKLYLSQKGYIEKVL 833
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 258 bits (660), Expect = 8e-67
Identities = 130/213 (61%), Positives = 165/213 (77%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG SP ++ R+KARLV KGY+Q GID+N++FSPVVKHSSIR LL++VA D E
Sbjct: 790 WIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYE 849
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q++V T FLH L+E+IYM QP GF V GKE VC+L+K LYGLK SPRQ YKRFD F
Sbjct: 850 LEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 909
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ QK+ R+++D CVY K+ + S IYLLLYVD++LIA + K I KLK +LS EFEMKD
Sbjct: 910 MLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKD 968
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI R+R +++LSQK Y++KVL
Sbjct: 969 LGAAKKILGMEITRERHSDKLYLSQKGYIEKVL 1001
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 258 bits (659), Expect = 1e-66
Identities = 129/213 (60%), Positives = 166/213 (77%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG SP ++ R+KARLV KGY+Q ID+N+VFSP+VKHSSIR LL++VA D E
Sbjct: 606 WIFKRKEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYE 665
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q++V T FLH L+E+IYM QP GF V GKE VC+L+K LYGLK SPRQ YKRFD F
Sbjct: 666 LEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 725
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ QK+ R+++D+CVY K+ + S IYLLLYVD++LIA + K I+KLK +LS EFEMKD
Sbjct: 726 MLSQKFRRSNYDNCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKD 784
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI R+R +++LSQK Y++KVL
Sbjct: 785 LGAAKKILGMEITRERHSGKLYLSQKGYIEKVL 817
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 253 bits (647), Expect = 3e-65
Identities = 129/213 (60%), Positives = 163/213 (76%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG S ++ R+KARL+ KGY+Q GID+N+VFSPVVKHSSIR LL++VA D E
Sbjct: 1071 WIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYE 1130
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q++V T FLH L+E+IYM QP GF V GKE VC+L+K LYGLK SPRQ YKRFD F
Sbjct: 1131 LEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 1190
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ QK+ R+++D CVY K+ + S IYLLLYVD++LIA + K I KLK +LS EFEMKD
Sbjct: 1191 MLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKD 1249
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI R R +++LSQK Y++KVL
Sbjct: 1250 LGAAKKILGMEITRKRHSFKLYLSQKGYIEKVL 1282
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 253 bits (647), Expect = 3e-65
Identities = 128/213 (60%), Positives = 163/213 (76%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG SP ++ R+KARLV KGY+Q GID+N+VFSP++KHSSIR LL +VA D E
Sbjct: 899 WIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYE 958
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q++V T FLH L+E+IYM QP GF V GKE VC+L+K LYGLK SPRQ YKRFD F
Sbjct: 959 LEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 1018
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ QK+ R+++D CVY K+ + S IYLLLYVD++LIA + K I KLK +LS EF MKD
Sbjct: 1019 MLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKD 1077
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI R+R +++LSQK Y++KVL
Sbjct: 1078 LGAAKKILGMEITRERHSGKLYLSQKGYIKKVL 1110
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 253 bits (647), Expect = 3e-65
Identities = 128/213 (60%), Positives = 163/213 (76%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG SP ++ R+KARLV KGY+Q GID+N+VFSP++KHSSIR LL +VA D E
Sbjct: 899 WIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYE 958
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q++V T FLH L+E+IYM QP GF V GKE VC+L+K LYGLK SPRQ YKRFD F
Sbjct: 959 LEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 1018
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ QK+ R+++D CVY K+ + S IYLLLYVD++LIA + K I KLK +LS EF MKD
Sbjct: 1019 MLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKD 1077
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI R+R +++LSQK Y++KVL
Sbjct: 1078 LGAAKKILGMEITRERHSGKLYLSQKGYIKKVL 1110
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 253 bits (646), Expect = 3e-65
Identities = 122/213 (57%), Positives = 162/213 (76%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEGSPGED-VRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
WV+ KKEG +D + +KARLV KGY+QKEG+DY+E+FSPVVKH+SIR+LL++ AQ+D+E
Sbjct: 830 WVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDYDEIFSPVVKHTSIRLLLSIAAQYDME 889
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q++V T FLH +L+E+IYM+QP GF GKE VC+L+K LYGLK SPRQ YK FD +
Sbjct: 890 IEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLYGLKQSPRQWYKPFDTY 949
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ YTR +D CVY+ ++ I LLLYVD++LIA R I KLK++L EF+MKD
Sbjct: 950 MLKIGYTRCQYDCCVYYHVFEDGKVILLLLYVDDMLIACRDMLQIQKLKKKLGAEFDMKD 1009
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG A+KILG+EIRRDR ++WLSQ+ Y+ K+L
Sbjct: 1010 LGAAQKILGIEIRRDRNAGKIWLSQEKYIMKIL 1042
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 251 bits (642), Expect = 1e-64
Identities = 128/213 (60%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +K+G SP ++ R+KARLV KGY+Q GID+N+VFSPV+KHSSIR LL++VA D E
Sbjct: 743 WIFKRKKGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYE 802
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q++V T FLH L+E+IYM QP GF V GKE V +L+K LYGLK SPRQ YKRFD F
Sbjct: 803 LEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFDSF 862
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M QK+ R+++D CVY K+ + S IYLLLYVD++LIA + K I+KLK +LS EFEMKD
Sbjct: 863 MFSQKFRRSNYDSCVYL-KVVDGSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKD 921
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI R+R +++LSQK Y++KVL
Sbjct: 922 LGAAKKILGMEITRERHSGKLYLSQKGYIEKVL 954
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 249 bits (635), Expect = 6e-64
Identities = 121/212 (57%), Positives = 156/212 (73%)
Frame = -2
Query: 638 WVYTKKEGSPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLES 459
WVY K + R++ARLVVKGYAQKEGID+NE+FSPVV+ +++RI+LA+ A FDL
Sbjct: 840 WVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHL 899
Query: 458 AQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQFM 279
QL+V T FLH L+EEIYM QP GF GKE VC+L K LYGLK +PR YKRFD F+
Sbjct: 900 EQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFI 959
Query: 278 IGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKDL 99
+ Y R DHC Y+++ ++N FI LLLYVD++L+A +K I +LK +L+ EFEMKDL
Sbjct: 960 MSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLAREFEMKDL 1019
Query: 98 GEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
G A KILGM+I RDR +++WLSQK YL+K+L
Sbjct: 1020 GPANKILGMQIHRDRNNRKIWLSQKNYLKKIL 1051
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 248 bits (634), Expect = 8e-64
Identities = 121/212 (57%), Positives = 155/212 (73%)
Frame = -2
Query: 638 WVYTKKEGSPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLES 459
WVY K + R++ARLVVKGYAQKEGID+NE+FSPVV+ +++RI+LA+ A FDL
Sbjct: 840 WVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHL 899
Query: 458 AQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQFM 279
QL+V T FLH L+EEIYM QP GF GKE VC+L K LYGLK +PR YKRFD F+
Sbjct: 900 EQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRYWYKRFDSFI 959
Query: 278 IGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKDL 99
+ Y R DHC Y+++ ++N FI LLLYVD++L+A +K I +LK +L+ EFEMKDL
Sbjct: 960 MSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLAREFEMKDL 1019
Query: 98 GEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
G A KILGM+I RDR ++WLSQK YL+K+L
Sbjct: 1020 GPANKILGMQIHRDRNNMKIWLSQKNYLKKIL 1051
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 248 bits (633), Expect = 1e-63
Identities = 130/213 (61%), Positives = 158/213 (74%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG SP E RFKARLV KG++Q G+DYN+VFSPVVKHSSIR ++VA DLE
Sbjct: 854 WIFKRKEGLSPSEPPRFKARLVAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLE 913
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
QL+V T FLH L+EEIYM QP GF V GKE VCKL++ LYGLK SPRQ YKRFD F
Sbjct: 914 LEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSF 973
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ + R+ D CVY K S IYLLLYVD+ILIA +SK I LK++LS EF+MKD
Sbjct: 974 MLSHGFKRSEFDSCVYI-KFVNGSPIYLLLYVDDILIAAKSKEQITTLKKQLSSEFDMKD 1032
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI RD+ ++LSQ++Y++KVL
Sbjct: 1033 LGAAKKILGMEITRDKNSGLLFLSQQSYIKKVL 1065
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 247 bits (631), Expect = 2e-63
Identities = 129/213 (60%), Positives = 157/213 (73%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG SP E RFK RLV KG++Q G+DYN+VFSPVVKHSSIR ++V DLE
Sbjct: 854 WIFKRKEGLSPSEPPRFKVRLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLE 913
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
QL+V TTFLH L+EEIYM QP GF V GKE VCKL++ LYGLK SPRQ YKRFD F
Sbjct: 914 LEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSF 973
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ + R+ D CVY K S IYLLLYVD++LIA +SK I LK++LS EF+MKD
Sbjct: 974 MLSHGFKRSEFDSCVYI-KFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKD 1032
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI RDR ++LSQ++Y++KVL
Sbjct: 1033 LGAAKKILGMEITRDRNSGLLFLSQQSYIKKVL 1065
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 246 bits (627), Expect = 5e-63
Identities = 121/212 (57%), Positives = 153/212 (72%)
Frame = -2
Query: 638 WVYTKKEGSPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLES 459
WVY K + R++ARLVVKGYAQKEGID+NE+FSPVV+ ++IR++LA+ A DL
Sbjct: 836 WVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHL 895
Query: 458 AQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQFM 279
QL+V T FLH L+EEIYM QP GFK GKE VC+L K LYGLK +PR YKRFD F+
Sbjct: 896 EQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFI 955
Query: 278 IGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKDL 99
I Y R DHC Y+++ N FI LLLYVD+IL+ +K + +LK +L+ EF+MKDL
Sbjct: 956 ISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDILVVGPNKDRVQELKAQLAREFDMKDL 1015
Query: 98 GEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
G A KILGM+I RDR +++WLSQK YL+KVL
Sbjct: 1016 GPANKILGMQIHRDRKDRKIWLSQKNYLRKVL 1047
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 245 bits (626), Expect = 7e-63
Identities = 125/213 (58%), Positives = 162/213 (76%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEGSPG-EDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
WV+T+K G PG E RF ARLV KG+ QKEG+DYNE+FSPVVKH SIR LL++V +++E
Sbjct: 864 WVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNME 923
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
Q++V T FLH L+EEIYM QP GF++ VC L++ LYGLK SPRQ RFD+F
Sbjct: 924 LQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEF 983
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M G KYTR+ +D CVYF+K +++IYLLLYVD++LIA+ +K +++LK+ LS EFEMKD
Sbjct: 984 MRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKD 1043
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG+AKKILGMEI RDR + LSQ+ Y++KVL
Sbjct: 1044 LGDAKKILGMEISRDRDAGLLTLSQEGYVKKVL 1076
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 245 bits (625), Expect = 9e-63
Identities = 127/213 (59%), Positives = 158/213 (74%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG S E ++KARLV +GY+Q G+DYN+VFSPVVKHSSIR L++VA DLE
Sbjct: 865 WIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLE 924
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
QL+V T FLH L+E+IYM QP GF V GKEK VCKL++ LYGLK SPRQ KRFD F
Sbjct: 925 LEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSF 984
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ + R+ +D CVY + + S IYLLLYVD++LIA +SK I KLK+ LS EF+MKD
Sbjct: 985 MLSHSFKRSKYDSCVYIKHV-NGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKD 1043
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI RDR ++LSQ Y++KVL
Sbjct: 1044 LGSAKKILGMEISRDRKSGLLFLSQHNYIKKVL 1076
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 245 bits (625), Expect = 9e-63
Identities = 127/213 (59%), Positives = 158/213 (74%), Gaps = 1/213 (0%)
Frame = -2
Query: 638 WVYTKKEG-SPGEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLE 462
W++ +KEG S E ++KARLV +GY+Q G+DYN+VFSPVVKHSSIR L++VA DLE
Sbjct: 865 WIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLE 924
Query: 461 SAQLNVNTTFLHDNLDEEIYMTQPSGFKVAGKEKCVCKLRKLLYGLK*SPRQRYKRFDQF 282
QL+V T FLH L+E+IYM QP GF V GKEK VCKL++ LYGLK SPRQ KRFD F
Sbjct: 925 LEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSF 984
Query: 281 MIGQKYTRNHHDHCVYFRKLQENSFIYLLLYVDNILIATRSKYGIDKLKRRLSLEFEMKD 102
M+ + R+ +D CVY + + S IYLLLYVD++LIA +SK I KLK+ LS EF+MKD
Sbjct: 985 MLSHSFKRSKYDSCVYIKHV-NGSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKD 1043
Query: 101 LGEAKKILGMEIRRDRVKKRVWLSQKTYLQKVL 3
LG AKKILGMEI RDR ++LSQ Y++KVL
Sbjct: 1044 LGSAKKILGMEISRDRKSGLLFLSQHNYIKKVL 1076