BLASTX nr result
ID: Paeonia23_contig00030668
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00030668
(1274 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 335 3e-89
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 310 9e-82
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 305 4e-80
gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus... 290 9e-76
ref|XP_007045723.1| DNA-directed RNA polymerase isoform 3 [Theob... 288 5e-75
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob... 288 5e-75
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 286 1e-74
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m... 286 1e-74
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 286 2e-74
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 285 2e-74
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 285 4e-74
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 284 5e-74
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 284 5e-74
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 284 5e-74
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 284 7e-74
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun... 283 9e-74
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 281 4e-73
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 281 4e-73
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 281 6e-73
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 275 4e-71
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 335 bits (858), Expect = 3e-89
Identities = 187/338 (55%), Positives = 220/338 (65%), Gaps = 1/338 (0%)
Frame = -3
Query: 1011 MWRSIAKQAYXXXXXXXXXXXXXXXXXXSIKISQDSVFSQRIRPVGYSTYVNYRYPLPGF 832
MWR++AK AY + + F + R + +VN P+ G
Sbjct: 1 MWRNLAKHAYTRRLQLSSQHSSFSPSNCTSRF----YFPDKARALESQDHVNSLRPVAGL 56
Query: 831 NRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDGSGVDEIH 652
RIG LS Q+D GR V+ P N G Y KGY SGVDE+
Sbjct: 57 RRIGVLSFQQDELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIASEEDM---SGVDEVQ 113
Query: 651 ELVAEVNKEDKMKSNFKQHRKLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELLVDM 472
ELV EVNK DK++ + KL+ G+ QGK+N+LRRRQ+KMETEAWEEAAKEY+ELL DM
Sbjct: 114 ELVEEVNKGDKLE----KQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDM 169
Query: 471 CEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADMMAVITX 292
CEQKLAPNLPY+KSLFLGW+EPLRD IA EQ+LCKQGKNR AYAPYF LPADMMAVIT
Sbjct: 170 CEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITM 229
Query: 291 XXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSI-AKDPKSESDPVI 115
GSARVVQAA IGEA+EHEVRI F+EKTKKKS + +P S+PV
Sbjct: 230 HKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPVT 289
Query: 114 KEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
KE+ KLRKKV+ L+KKQKLQQVR+IVK +DDSKPWGQD
Sbjct: 290 KEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQD 327
>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
gi|462422319|gb|EMJ26582.1| hypothetical protein
PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 310 bits (794), Expect = 9e-82
Identities = 174/355 (49%), Positives = 225/355 (63%), Gaps = 18/355 (5%)
Frame = -3
Query: 1011 MWRSIAKQAYXXXXXXXXXXXXXXXXXXSIKISQDSVFSQRIRPVGYSTYVNYRYPLPGF 832
MWR++AKQ S+ SQ+S F + R +N R + GF
Sbjct: 1 MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60
Query: 831 NRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDGSGVDEIH 652
++G ++SQ++ GR S + P+ ISGF +Y+KGY D SG +EI
Sbjct: 61 RQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSEEIQ 120
Query: 651 ELVAEVNKEDKM-KSNFKQHRKLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELLVD 475
E++ ++ +E+ M +S+FKQ +++V GMG GKYN+LR+RQ+K+ETEAW+EAAKEYQELL D
Sbjct: 121 EMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLAD 180
Query: 474 MCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADMMAVIT 295
MCEQKLAPNLPY+KSLFLGW+EPLRDAIA +Q+ CKQ +R ++APYF LPAD MAVIT
Sbjct: 181 MCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADKMAVIT 240
Query: 294 -XXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKSESDPV 118
GS RVVQAA IGEA+EHEVRIH FLEKTKKK D K+E+D V
Sbjct: 241 MHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTIDKKAEADSV 300
Query: 117 ----------------IKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
KE+ +LRKKV LIK+QK+QQVR IVK ++D KPWGQ+
Sbjct: 301 PVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQE 355
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 305 bits (780), Expect = 4e-80
Identities = 180/349 (51%), Positives = 216/349 (61%), Gaps = 9/349 (2%)
Frame = -3
Query: 1020 PLRMWRSIAKQAYXXXXXXXXXXXXXXXXXXS--IKISQDSVFSQRIRPVGY--STYVNY 853
P MWR+IAK+A + SQD +F + ++ + S+ +
Sbjct: 37 PTVMWRNIAKRAIPRAPRKCVYLDSQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSSCSSS 96
Query: 852 RYPLPGFNRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDG 673
+ GF RIG +SS+ED GR S N SGF K Y D
Sbjct: 97 GFSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFC--PKSYASVAEAVSSTDVEEDV 154
Query: 672 SGVDEIHELVAEVNKEDKMKSNFKQHRKLV--DGMGQGKYNMLRRRQVKMETEAWEEAAK 499
S DEI EL+ E+ KE+K + NFK+ KL GM QG+Y LRRRQVK+ETEAWE AAK
Sbjct: 155 SASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAK 214
Query: 498 EYQELLVDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLP 319
EY+ELL+DMCEQKLAPNLPYMKSLFLGW+EPLRDAI EQELC+ GKN+ AYAPYF LP
Sbjct: 215 EYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLP 274
Query: 318 ADMMAVITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDP 139
ADMM+VIT GS RVVQAA IG+A+E EVRIH+FLEKTK+K + KD
Sbjct: 275 ADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDK 334
Query: 138 KSES---DPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
E DPVI E+ KLRKKVT L+KKQKL R+IVKG D+SKPWG +
Sbjct: 335 NVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPE 383
>gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus guttatus]
Length = 983
Score = 290 bits (742), Expect = 9e-76
Identities = 168/341 (49%), Positives = 208/341 (60%), Gaps = 4/341 (1%)
Frame = -3
Query: 1011 MWRSIAKQAYXXXXXXXXXXXXXXXXXXSIKISQDSVFSQRIRPVGYSTYVNYRYPLPGF 832
MWR+++KQ+Y + K +DS+F + P + +N GF
Sbjct: 1 MWRNLSKQSYLRNFKVFSESHPSPNAFSAGKSPKDSIFVENAVPRQLRSCINTCGSELGF 60
Query: 831 NRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDGSGVDEIH 652
R + + A+S++ F G ++GY VDE+
Sbjct: 61 RRALVFWRPPREASCPNYAISSHTFRFFGS---TRGYAAAAEALVSTSEEE----VDELQ 113
Query: 651 ELVAEVNKEDKMKSNFKQHRK---LVDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELL 481
EL+ E+NKE +KS + +K LV GMG GKYN LRRRQ+K+ETEAWE AAKEYQELL
Sbjct: 114 ELIEEINKEINVKSTDNREQKQPKLVGGMGLGKYNSLRRRQIKIETEAWENAAKEYQELL 173
Query: 480 VDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADMMAV 301
DMCEQKLAPNLPY+KSLFLGW+EPLRDAIA EQ+LCK+GKNR AYAPYF LPA+MMAV
Sbjct: 174 EDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYFDQLPAEMMAV 233
Query: 300 ITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKSES-D 124
IT GSARVVQAA IGEA+EHEVRIH FL+ K+K+ E D
Sbjct: 234 ITMHKLMGLLMTGGGNGSARVVQAACHIGEAIEHEVRIHKFLDNCKRKNALNRTSEEGPD 293
Query: 123 PVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
P KE+ +LRKKV L+KKQK+QQVR IV+ +DD KPWGQD
Sbjct: 294 PEAKEQDRLRKKVKILMKKQKVQQVRNIVRHQDDLKPWGQD 334
>ref|XP_007045723.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
gi|508709658|gb|EOY01555.1| DNA-directed RNA polymerase
isoform 3 [Theobroma cacao]
Length = 932
Score = 288 bits (736), Expect = 5e-75
Identities = 170/348 (48%), Positives = 210/348 (60%), Gaps = 11/348 (3%)
Frame = -3
Query: 1011 MWRSIAKQAYXXXXXXXXXXXXXXXXXXSIK--ISQDSVFSQRIRPVGYSTYVNYRYPLP 838
MWRS+ KQA SQDSVF+ ++R Y P
Sbjct: 1 MWRSLVKQAAYREKFKFVAEPYTCSLSSCSATGFSQDSVFANKVRASEARANGFYGCLFP 60
Query: 837 GFNRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDGSGVDE 658
GF +IG SSQ+D+ G+FSL +P SG KGY GS +E
Sbjct: 61 GFRQIGVFSSQKDDLGKFSLNQPGDPLRFSGKFWNLKGYASAAEAVISTEEDMSGS--EE 118
Query: 657 IHELVAEVNKEDKMKSNFKQHRKLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELLV 478
IHEL+ + +E+K S Q +K+ +GMG KYN L++RQ+K+ETEAWEEAAKEYQELL+
Sbjct: 119 IHELMEAMAREEKKMSFLVQPKKVAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELLM 178
Query: 477 DMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADMMAVI 298
DMCE KLAPNLPY+KSLFLGW+EPLRD+I EQELCK+ R+++A YF L ADMMAV+
Sbjct: 179 DMCEHKLAPNLPYIKSLFLGWFEPLRDSIVGEQELCKE-NCRISHAAYFNELSADMMAVV 237
Query: 297 TXXXXXXXXXXXXXXGSA-RVVQAASQIGEALEHEVRIHSFLEKTKKKSIA-KDPKSESD 124
T RVVQAA QIGEA+EHE +I SFL KTKKK K P ES+
Sbjct: 238 TMHKLMGLLMTNTAGTGGIRVVQAACQIGEAIEHEAKIQSFLGKTKKKKTTDKKPDGESE 297
Query: 123 PV-------IKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
PV +K++ KLRKKVT L+KKQK+ QVR+IVKG D SK WGQ+
Sbjct: 298 PVTNKQEKLVKDQEKLRKKVTQLLKKQKVHQVRKIVKGHDTSKSWGQE 345
>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|590698457|ref|XP_007045722.1| DNA-directed RNA
polymerase isoform 1 [Theobroma cacao]
gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 996
Score = 288 bits (736), Expect = 5e-75
Identities = 170/348 (48%), Positives = 210/348 (60%), Gaps = 11/348 (3%)
Frame = -3
Query: 1011 MWRSIAKQAYXXXXXXXXXXXXXXXXXXSIK--ISQDSVFSQRIRPVGYSTYVNYRYPLP 838
MWRS+ KQA SQDSVF+ ++R Y P
Sbjct: 1 MWRSLVKQAAYREKFKFVAEPYTCSLSSCSATGFSQDSVFANKVRASEARANGFYGCLFP 60
Query: 837 GFNRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDGSGVDE 658
GF +IG SSQ+D+ G+FSL +P SG KGY GS +E
Sbjct: 61 GFRQIGVFSSQKDDLGKFSLNQPGDPLRFSGKFWNLKGYASAAEAVISTEEDMSGS--EE 118
Query: 657 IHELVAEVNKEDKMKSNFKQHRKLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELLV 478
IHEL+ + +E+K S Q +K+ +GMG KYN L++RQ+K+ETEAWEEAAKEYQELL+
Sbjct: 119 IHELMEAMAREEKKMSFLVQPKKVAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELLM 178
Query: 477 DMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADMMAVI 298
DMCE KLAPNLPY+KSLFLGW+EPLRD+I EQELCK+ R+++A YF L ADMMAV+
Sbjct: 179 DMCEHKLAPNLPYIKSLFLGWFEPLRDSIVGEQELCKE-NCRISHAAYFNELSADMMAVV 237
Query: 297 TXXXXXXXXXXXXXXGSA-RVVQAASQIGEALEHEVRIHSFLEKTKKKSIA-KDPKSESD 124
T RVVQAA QIGEA+EHE +I SFL KTKKK K P ES+
Sbjct: 238 TMHKLMGLLMTNTAGTGGIRVVQAACQIGEAIEHEAKIQSFLGKTKKKKTTDKKPDGESE 297
Query: 123 PV-------IKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
PV +K++ KLRKKVT L+KKQK+ QVR+IVKG D SK WGQ+
Sbjct: 298 PVTNKQEKLVKDQEKLRKKVTQLLKKQKVHQVRKIVKGHDTSKSWGQE 345
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 286 bits (733), Expect = 1e-74
Identities = 148/225 (65%), Positives = 178/225 (79%), Gaps = 3/225 (1%)
Frame = -3
Query: 666 VDEIHELVAEVNKEDK-MKSNFKQHR-KLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEY 493
+DEI EL+ E+NKE++ +K+N + + K + GMG GKYN+LRRRQ+K+ETEAWEEAAKEY
Sbjct: 129 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEY 188
Query: 492 QELLVDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPAD 313
QELL+DMCEQKLAPNLPYMKSLFLGW+EPLRDAIA EQ+LC +GKNR AYAP+F LPA+
Sbjct: 189 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 248
Query: 312 MMAVITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKK-KSIAKDPK 136
MMAVIT GSARVVQAAS IGEA+EHE RIH FLEKTKK +++ D +
Sbjct: 249 MMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLE 308
Query: 135 SESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
++KE +LRKKV L+KKQKLQQVR+IVK +DD KPWGQD
Sbjct: 309 DTPGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQD 353
>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
DNA-directed RNA polymerase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 997
Score = 286 bits (733), Expect = 1e-74
Identities = 166/326 (50%), Positives = 209/326 (64%), Gaps = 19/326 (5%)
Frame = -3
Query: 921 KISQDSVFSQRIRPVGYSTYVNYRYPLPGFNRIGGLSSQEDNSGRFSLAVSTNPFNISGF 742
+++QD Q++R T + Y G RI GLSSQ + S TNPF GF
Sbjct: 24 QLNQDLDILQKVRHPEAQTLLCSPYSFLGSRRISGLSSQNHEFIKPSFTNLTNPF---GF 80
Query: 741 AHYS-KGYXXXXXXXXXXXXXXDGSGVDEIHELVAEVNKEDK-MKSNFKQH------RKL 586
+H+ KGY D SG DE+ E + E+NK K M ++F+Q +K
Sbjct: 81 SHFLFKGYATAAAQVIASTDESDFSGCDELQEQIEEINKHHKKMDAHFRQQQQQQQRKKT 140
Query: 585 VDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELLVDMCEQKLAPNLPYMKSLFLGWYEP 406
+ GMG GKY +L++RQ+KMETEAWEEAA+EYQELL DMCEQKLAPNLPY+KSLFLGW+EP
Sbjct: 141 IAGMGIGKYTILKKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEP 200
Query: 405 LRDAIATEQELCKQGKNRMAYAPYFILLPADMMAVIT-XXXXXXXXXXXXXXGSARVVQA 229
LRDAIA EQEL ++ N++++ PYF LPADMMAVIT GS RVVQA
Sbjct: 201 LRDAIAKEQELSREKNNKLSHGPYFDALPADMMAVITMHKLMGLLMTTNGGNGSVRVVQA 260
Query: 228 ASQIGEALEHEVRIHSFLEKTKKKSIA---KDPKSESDPV-------IKEEGKLRKKVTT 79
A +GEA+EHE RIH FLEKTKKK + ++P+ + +PV KE+ KLRKKVT
Sbjct: 261 ACAVGEAIEHEARIHRFLEKTKKKKKSTKNEEPEGKLEPVTSDAEKLAKEQEKLRKKVTE 320
Query: 78 LIKKQKLQQVREIVKGRDDSKPWGQD 1
L+KKQK+QQVR + KG DDS PWGQ+
Sbjct: 321 LMKKQKVQQVRGLTKGHDDSMPWGQE 346
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum tuberosum]
Length = 993
Score = 286 bits (731), Expect = 2e-74
Identities = 146/224 (65%), Positives = 177/224 (79%), Gaps = 2/224 (0%)
Frame = -3
Query: 666 VDEIHELVAEVNKEDK-MKSNFKQHR-KLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEY 493
+DEI EL+ E+NKE++ +K+N + + K V GMG GKYN+LRRRQ+K+ETEAWE+AAKEY
Sbjct: 121 IDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGKYNLLRRRQIKVETEAWEDAAKEY 180
Query: 492 QELLVDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPAD 313
QELL+DMCEQKLAPNLPY+KSLFLGW+EPLRDAIA EQ+LC +GKNR AYAP+F LPA+
Sbjct: 181 QELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 240
Query: 312 MMAVITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKS 133
MMAVIT GSARVVQAAS IGEA+EHE RIH FLEKTKK ++ +
Sbjct: 241 MMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTKKNALDGSLEE 300
Query: 132 ESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
+ ++KE +LRKKV L+KKQKLQQVR+IVK +DD KPWGQD
Sbjct: 301 TAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQD 344
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial;
AltName: Full=NsRpoT-A; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1;
Flags: Precursor gi|15824083|dbj|BAB69431.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1002
Score = 285 bits (730), Expect = 2e-74
Identities = 147/225 (65%), Positives = 178/225 (79%), Gaps = 3/225 (1%)
Frame = -3
Query: 666 VDEIHELVAEVNKEDK-MKSNFKQHR-KLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEY 493
+DEI EL+ E+NKE++ +K+N + + K + GMG GKYN+LRRRQ+K+ETEAWEEAAKEY
Sbjct: 129 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEY 188
Query: 492 QELLVDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPAD 313
QELL+DMCEQKLAPNLPYMKSLFLGW+EPLRDAIA EQ+LC +GKNR AYAP+F LPA+
Sbjct: 189 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 248
Query: 312 MMAVITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKK-KSIAKDPK 136
MMAVIT GSARVVQAAS IGEA+EHE RIH FLEKTKK +++ D +
Sbjct: 249 MMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLE 308
Query: 135 SESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
++KE ++RKKV L+KKQKLQQVR+IVK +DD KPWGQD
Sbjct: 309 DTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQD 353
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum lycopersicum]
Length = 993
Score = 285 bits (728), Expect = 4e-74
Identities = 145/224 (64%), Positives = 177/224 (79%), Gaps = 2/224 (0%)
Frame = -3
Query: 666 VDEIHELVAEVNKEDK-MKSNFKQHR-KLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEY 493
+DEI EL+ E+NKE++ +K+N + + K V GMG GKYN+LRRRQ+K+ETEAWE+AAKEY
Sbjct: 121 IDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGKYNLLRRRQIKVETEAWEDAAKEY 180
Query: 492 QELLVDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPAD 313
QELL+DMCEQKLAPNLPY+KSLFLGW+EPL+DAIA EQ+LC +GKNR AYAP+F LPA+
Sbjct: 181 QELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 240
Query: 312 MMAVITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKS 133
MMAVIT GSARVVQAAS IGEA+EHE RIH FLEKTKK ++ +
Sbjct: 241 MMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTKKNALDGSLEE 300
Query: 132 ESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
+ ++KE +LRKKV L+KKQKLQQVR+IVK +DD KPWGQD
Sbjct: 301 TAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQD 344
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 284 bits (727), Expect = 5e-74
Identities = 172/344 (50%), Positives = 210/344 (61%), Gaps = 7/344 (2%)
Frame = -3
Query: 1011 MWRSIAKQAYXXXXXXXXXXXXXXXXXXSIKISQDSVFSQRIRPVGYSTYVNYRYPLPGF 832
MWR++AKQA + ISQDS+ ++++ G V G
Sbjct: 47 MWRNVAKQAISLHLKKPFSRAYSF-----LGISQDSILREKVK-FGCLDMVPRGIHEVGS 100
Query: 831 NRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDGSGVDEIH 652
RIG + + ED GR S V N F +GY D S V+EI
Sbjct: 101 GRIGEILNHEDYMGRTSFGVLKN----DNF-WCPRGYATVAEAVSSTDVEEDVSIVEEIQ 155
Query: 651 ELVAEVNKEDKMKSNF---KQHRKLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELL 481
EL+ E+ KE++ + + R++ GMG GKY ML+ RQVK+ETEAWE+AA EY+ELL
Sbjct: 156 ELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELL 215
Query: 480 VDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADMMAV 301
+DMCEQKLAPNLPYMKSLFLGW+EPLRDAIA EQE C+ K+++AYAPYF LPADMMAV
Sbjct: 216 MDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAV 275
Query: 300 ITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPK----S 133
IT G ARVVQAA IG+A+E EVRIH FLEKTKKK+ K+ +
Sbjct: 276 ITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGD 335
Query: 132 ESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
ES+ V E+ KLRKKVT LIKKQKL VR IVKG+DD KPWGQD
Sbjct: 336 ESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQD 379
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 284 bits (727), Expect = 5e-74
Identities = 172/344 (50%), Positives = 210/344 (61%), Gaps = 7/344 (2%)
Frame = -3
Query: 1011 MWRSIAKQAYXXXXXXXXXXXXXXXXXXSIKISQDSVFSQRIRPVGYSTYVNYRYPLPGF 832
MWR++AKQA + ISQDS+ ++++ G V G
Sbjct: 47 MWRNVAKQAISLHLKKPFSRAYSF-----LGISQDSILREKVK-FGCLDMVPRGIHEVGS 100
Query: 831 NRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDGSGVDEIH 652
RIG + + ED GR S V N F +GY D S V+EI
Sbjct: 101 GRIGEILNHEDYMGRTSFGVLKN----DNF-WCPRGYATVAEAVSSTDVEEDVSIVEEIQ 155
Query: 651 ELVAEVNKEDKMKSNF---KQHRKLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELL 481
EL+ E+ KE++ + + R++ GMG GKY ML+ RQVK+ETEAWE+AA EY+ELL
Sbjct: 156 ELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELL 215
Query: 480 VDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADMMAV 301
+DMCEQKLAPNLPYMKSLFLGW+EPLRDAIA EQE C+ K+++AYAPYF LPADMMAV
Sbjct: 216 MDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAV 275
Query: 300 ITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPK----S 133
IT G ARVVQAA IG+A+E EVRIH FLEKTKKK+ K+ +
Sbjct: 276 ITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGD 335
Query: 132 ESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
ES+ V E+ KLRKKVT LIKKQKL VR IVKG+DD KPWGQD
Sbjct: 336 ESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQD 379
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 284 bits (727), Expect = 5e-74
Identities = 172/344 (50%), Positives = 210/344 (61%), Gaps = 7/344 (2%)
Frame = -3
Query: 1011 MWRSIAKQAYXXXXXXXXXXXXXXXXXXSIKISQDSVFSQRIRPVGYSTYVNYRYPLPGF 832
MWR++AKQA + ISQDS+ ++++ G V G
Sbjct: 47 MWRNVAKQAISLHLKKPFSRAYSF-----LGISQDSILREKVK-FGCLDMVPRGIHEVGS 100
Query: 831 NRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDGSGVDEIH 652
RIG + + ED GR S V N F +GY D S V+EI
Sbjct: 101 GRIGEILNHEDYMGRTSFGVLKN----DNF-WCPRGYATVAEAVSSTDVEEDVSIVEEIQ 155
Query: 651 ELVAEVNKEDKMKSNF---KQHRKLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELL 481
EL+ E+ KE++ + + R++ GMG GKY ML+ RQVK+ETEAWE+AA EY+ELL
Sbjct: 156 ELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELL 215
Query: 480 VDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADMMAV 301
+DMCEQKLAPNLPYMKSLFLGW+EPLRDAIA EQE C+ K+++AYAPYF LPADMMAV
Sbjct: 216 MDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAV 275
Query: 300 ITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPK----S 133
IT G ARVVQAA IG+A+E EVRIH FLEKTKKK+ K+ +
Sbjct: 276 ITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGD 335
Query: 132 ESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
ES+ V E+ KLRKKVT LIKKQKL VR IVKG+DD KPWGQD
Sbjct: 336 ESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQD 379
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 284 bits (726), Expect = 7e-74
Identities = 172/341 (50%), Positives = 208/341 (60%), Gaps = 4/341 (1%)
Frame = -3
Query: 1011 MWRSIAKQAYXXXXXXXXXXXXXXXXXXSIKISQDSVFSQRIRPVGYSTYVNYRYPLPGF 832
MWR++AKQA + ISQDS+ ++++ G V G
Sbjct: 47 MWRNVAKQAISLHLKKPFSRAYSF-----LGISQDSILREKVK-FGCLDMVPRGIHEVGS 100
Query: 831 NRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDGSGVDEIH 652
RIG + + ED GR S V N F +GY D S V+EI
Sbjct: 101 GRIGEILNHEDYMGRTSFGVLKN----DNF-WCPRGYATVAEAVSSTDVEEDVSIVEEIQ 155
Query: 651 ELVAEVNKEDKMKSNFKQHRKLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELLVDM 472
EL+ E+ KE + + R++ GMG GKY ML+ RQVK+ETEAWE+AA EY+ELL+DM
Sbjct: 156 ELLQEMKKEQQSGGG-RNRRRVARGMGSGKYRMLKMRQVKIETEAWEKAANEYRELLMDM 214
Query: 471 CEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADMMAVITX 292
CEQKLAPNLPYMKSLFLGW+EPLRDAIA EQE C+ K+++AYAPYF LPADMMAVIT
Sbjct: 215 CEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITM 274
Query: 291 XXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPK----SESD 124
G ARVVQAA IG+A+E EVRIH FLEKTKKK+ K+ + ES+
Sbjct: 275 HKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESN 334
Query: 123 PVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
V E+ KLRKKVT LIKKQKL VR IVKG+DD KPWGQD
Sbjct: 335 TVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQD 375
>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
gi|462411068|gb|EMJ16117.1| hypothetical protein
PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 283 bits (725), Expect = 9e-74
Identities = 162/337 (48%), Positives = 206/337 (61%), Gaps = 3/337 (0%)
Frame = -3
Query: 1011 MWRSIAKQAYXXXXXXXXXXXXXXXXXXSIKISQDSVFSQRIRPVGYSTYVNYRYPLPGF 832
+WR+ AKQA + I Q+SVF +P S+ + R+ GF
Sbjct: 36 VWRNFAKQAISRKQRFHINSQSFSRAYSLLGICQESVFPGNFKPFELSSCSSLRFSEVGF 95
Query: 831 NRIGGLSSQEDNSGRFSLAVSTNPFNISGFAHYSKGYXXXXXXXXXXXXXXDGSGVDEIH 652
G +SS ED + S NP +GF KGY + S VDE+
Sbjct: 96 RGKGAISSPEDCMCKPSFWSVRNPIWFNGFC--PKGYASVAEAVSSTDVEEEVSVVDEVQ 153
Query: 651 ELVAEVNKEDKMKSNFKQHRKL--VDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQELLV 478
EL+ +++ E+K ++ +KQ + GMGQGKY+ML+RRQ+K+ETEAWE AAKEY+EL++
Sbjct: 154 ELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELMM 213
Query: 477 DMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADMMAVI 298
DMCEQKLAPNLPYMKSLFLGW+EPLR+AI EQ+LC++GKN+ AYAPY LPADMM+VI
Sbjct: 214 DMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPADMMSVI 273
Query: 297 TXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKS-ESDP 121
T G+ RVV AA IGEA+E EVRIH FLE T+KK + KD ++ ESD
Sbjct: 274 TMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQENGESDA 333
Query: 120 VIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPW 10
KE KL KKVT L+KKQKL+ VR IV D SK W
Sbjct: 334 AKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSW 370
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial;
AltName: Full=NictaRpoT1-tom; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1B;
Flags: Precursor
Length = 1002
Score = 281 bits (719), Expect = 4e-73
Identities = 146/225 (64%), Positives = 177/225 (78%), Gaps = 3/225 (1%)
Frame = -3
Query: 666 VDEIHELVAEVNKEDK-MKSNFKQHR-KLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEY 493
+DEI EL+ E++KE++ +K+N + + K + GMG GKYN LRRRQ+K+ETEAWEEAAKEY
Sbjct: 129 IDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQIKVETEAWEEAAKEY 188
Query: 492 QELLVDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPAD 313
QELL+DMCEQKLAPNLPYMKSLFLGW+EPLRDAIA EQ+LC +GKNR AYAP+F LPA+
Sbjct: 189 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 248
Query: 312 MMAVITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKK-KSIAKDPK 136
MMAVIT GSARVVQAAS IGEA+EHE RIH FLEKTKK +++ D +
Sbjct: 249 MMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLE 308
Query: 135 SESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
++KE +LRKKV L+KKQKL+QVR+IVK +DD KPWGQD
Sbjct: 309 ETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQD 353
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 281 bits (719), Expect = 4e-73
Identities = 146/225 (64%), Positives = 177/225 (78%), Gaps = 3/225 (1%)
Frame = -3
Query: 666 VDEIHELVAEVNKEDK-MKSNFKQHR-KLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEY 493
+DEI EL+ E++KE++ +K+N + + K + GMG GKYN LRRRQ+K+ETEAWEEAAKEY
Sbjct: 129 IDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQIKVETEAWEEAAKEY 188
Query: 492 QELLVDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPAD 313
QELL+DMCEQKLAPNLPYMKSLFLGW+EPLRDAIA EQ+LC +GKNR AYAP+F LPA+
Sbjct: 189 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 248
Query: 312 MMAVITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKK-KSIAKDPK 136
MMAVIT GSARVVQAAS IGEA+EHE RIH FLEKTKK +++ D +
Sbjct: 249 MMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLE 308
Query: 135 SESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
++KE +LRKKV L+KKQKL+QVR+IVK +DD KPWGQD
Sbjct: 309 ETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQD 353
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 281 bits (718), Expect = 6e-73
Identities = 146/224 (65%), Positives = 176/224 (78%), Gaps = 3/224 (1%)
Frame = -3
Query: 663 DEIHELVAEVNKEDK-MKSNFKQHR-KLVDGMGQGKYNMLRRRQVKMETEAWEEAAKEYQ 490
DEI EL+ E+NKE++ +K+N + + K + GMG GKYN+LRRRQ+K+ETEAWEEAAKEYQ
Sbjct: 130 DEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEYQ 189
Query: 489 ELLVDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLPADM 310
ELL+DMCEQKLAPNLPYMKSLFLGW+EPLRDAIA EQ+LC +GKNR A AP+F LPA+M
Sbjct: 190 ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGACAPFFDQLPAEM 249
Query: 309 MAVITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKK-KSIAKDPKS 133
MAVIT GSARVVQAAS IGEA+EHE RIH FLEKTKK +++ D +
Sbjct: 250 MAVITMHKLMGWLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLED 309
Query: 132 ESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
++KE ++RKKV L+KKQKLQQVR+IVK +DD KPWGQD
Sbjct: 310 TPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQD 353
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 275 bits (702), Expect = 4e-71
Identities = 143/227 (62%), Positives = 172/227 (75%), Gaps = 3/227 (1%)
Frame = -3
Query: 672 SGVDEIHELVAEVNKEDKMKSNFKQH--RKLVDGMGQGKYNMLRRRQVKMETEAWEEAAK 499
S VDE+HEL+ E+ KE+K + F++ R L GMG KY L+RRQVK+ETEAWE+AAK
Sbjct: 143 SVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAK 202
Query: 498 EYQELLVDMCEQKLAPNLPYMKSLFLGWYEPLRDAIATEQELCKQGKNRMAYAPYFILLP 319
EY+ELL DMCEQKLAPNLPY+KSLFLGW+EPLRD IA EQELC QGK++ AYA YF LP
Sbjct: 203 EYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLP 262
Query: 318 ADMMAVITXXXXXXXXXXXXXXGSARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKD- 142
ADMMAVIT G+ARVVQAA IG+A+E EVRIH+FLEKTKK+ KD
Sbjct: 263 ADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDK 322
Query: 141 PKSESDPVIKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQD 1
K + + V +E+ KLRKKVT L+KKQKL+ V +IV+ +DDSKPWGQD
Sbjct: 323 QKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQD 369