BLASTX nr result

ID: Paeonia23_contig00030483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00030483
         (333 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle...    57   3e-06
gb|AGH20674.1| reverse transcriptase, partial [Crucihimalaya wal...    56   5e-06
gb|AGH20672.1| reverse transcriptase, partial [Thlaspi arvense]        56   5e-06
gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]        56   5e-06
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]          56   5e-06
gb|AGH20666.1| reverse transcriptase, partial [Arabis hirsuta]         55   8e-06
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...    55   8e-06
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle...    55   8e-06
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle...    55   8e-06
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...    55   8e-06
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...    55   8e-06
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    55   8e-06
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]              55   8e-06
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...    55   8e-06
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...    55   8e-06

>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSLP 286
           LGI+VKQ D  IF    GYA +VLKRFKM++   V   ++CG+KL+K +EGE +  T+  
Sbjct: 229 LGIEVKQEDNGIFITQEGYAKEVLKRFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFK 288

Query: 287 LHLQRIQFCT 316
             +  +++ T
Sbjct: 289 SLVGSLRYLT 298


>gb|AGH20674.1| reverse transcriptase, partial [Crucihimalaya wallichii]
          Length = 315

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLT 277
           LGIKVKQ D  IF    GYA +VLK+FKM++   V+  ++CG KL+K +EGE +  T
Sbjct: 229 LGIKVKQEDNGIFITQEGYAKEVLKKFKMDDSNVVSTPIECGAKLSKQEEGESVDPT 285


>gb|AGH20672.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLT 277
           LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG KL+K DEGE +  T
Sbjct: 229 LGIEVKQEDNGIFISQEGYAKEVLKKFKMDDSNPVCTPMECGAKLSKHDEGESVDPT 285


>gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLT 277
           LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG KL+K DEGE +  T
Sbjct: 229 LGIEVKQEDNGIFISQEGYAKEVLKKFKMDDSNPVCTPMECGAKLSKHDEGESVDPT 285


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSL 283
           LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG+KL+K +EGE +  T+L
Sbjct: 565 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTNL 623


>gb|AGH20666.1| reverse transcriptase, partial [Arabis hirsuta]
          Length = 315

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLT 277
           LGI+VKQ D  IF    GYA +VLK+FKM++   V+  ++CG KL+K +EGE +  T
Sbjct: 229 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVSTPIECGTKLSKHEEGESMDST 285


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSLP 286
           LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG+KL+K +EGE +  T+  
Sbjct: 229 LGIEVKQEDNGIFISQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFK 288

Query: 287 LHLQRIQFCT 316
             +  +++ T
Sbjct: 289 SLVGSLRYLT 298


>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSLP 286
           LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG+KL+K +EGE +  T+  
Sbjct: 229 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFK 288

Query: 287 LHLQRIQFCT 316
             +  +++ T
Sbjct: 289 SLVGSLRYLT 298


>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSLP 286
           LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG+KL+K +EGE +  T+  
Sbjct: 229 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFK 288

Query: 287 LHLQRIQFCT 316
             +  +++ T
Sbjct: 289 SLVGSLRYLT 298


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSLP 286
           LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG+KL+K +EGE +  T+  
Sbjct: 229 LGIEVKQEDNRIFITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFK 288

Query: 287 LHLQRIQFCT 316
             +  +++ T
Sbjct: 289 SLVGSLRYLT 298


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 116 LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSLP 286
           LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG+KL+K +EGE +  T+  
Sbjct: 229 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFK 288

Query: 287 LHLQRIQFCT 316
             +  +++ T
Sbjct: 289 SLVGSLRYLT 298


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 116  LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSLP 286
            LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG+KL+K +EGE +  T+  
Sbjct: 1068 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFK 1127

Query: 287  LHLQRIQFCT 316
              +  +++ T
Sbjct: 1128 SLVGSLRYLT 1137


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 116  LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSLP 286
            LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG+KL+K +EGE +  T+  
Sbjct: 1007 LGIEVKQEDNRIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFK 1066

Query: 287  LHLQRIQFCT 316
              +  +++ T
Sbjct: 1067 SLVGSLRYLT 1076


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 116  LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSLP 286
            LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG+KL+K +EGE +  T+  
Sbjct: 1036 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFK 1095

Query: 287  LHLQRIQFCT 316
              +  +++ T
Sbjct: 1096 SLVGSLRYLT 1105


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 116  LGIKVKQMDKVIF---HGYAGDVLKRFKMENCKHVAASVKCGLKLTKFDEGEKIQLTSLP 286
            LGI+VKQ D  IF    GYA +VLK+FKM++   V   ++CG+KL+K +EGE +  T+  
Sbjct: 1068 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFK 1127

Query: 287  LHLQRIQFCT 316
              +  +++ T
Sbjct: 1128 SLVGSLRYLT 1137


Top