BLASTX nr result
ID: Paeonia23_contig00028751
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00028751
(423 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71647.1| hypothetical protein VITISV_015503 [Vitis vinifera] 124 1e-26
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera] 123 3e-26
emb|CAN60706.1| hypothetical protein VITISV_043852 [Vitis vinifera] 120 1e-25
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers... 120 3e-25
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 117 2e-24
emb|CAN69058.1| hypothetical protein VITISV_022968 [Vitis vinifera] 110 2e-22
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera] 110 3e-22
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 104 1e-20
gb|AAD15380.1| putative retroelement pol polyprotein [Arabidopsi... 100 2e-19
emb|CAN72468.1| hypothetical protein VITISV_006796 [Vitis vinifera] 100 2e-19
emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera] 96 4e-18
emb|CAN61562.1| hypothetical protein VITISV_039565 [Vitis vinifera] 94 1e-17
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera] 94 3e-17
gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana] 93 4e-17
emb|CAN72203.1| hypothetical protein VITISV_001820 [Vitis vinifera] 93 4e-17
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha... 89 6e-16
gb|AEL30347.1| copia-like polyprotein [Arachis hypogaea] 88 1e-15
emb|CAN76012.1| hypothetical protein VITISV_020948 [Vitis vinifera] 88 1e-15
dbj|BAF36296.1| hypothetical protein [Ipomoea trifida] 86 4e-15
gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida] 86 4e-15
>emb|CAN71647.1| hypothetical protein VITISV_015503 [Vitis vinifera]
Length = 211
Score = 124 bits (311), Expect = 1e-26
Identities = 67/154 (43%), Positives = 96/154 (62%), Gaps = 18/154 (11%)
Frame = -1
Query: 411 KVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDK----GSTLLQDSSTVI 244
++ NES R K GRP+ SKD+ PRKRK+ E ++TD+ S L+++ +
Sbjct: 58 QLTNESKIRLKCGRPVDSKDVTPRKRKTQEKLGTLEEAIKMTDQFKIDKSIALEEAQIMQ 117
Query: 243 -VPEATII-------------TPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKV 106
PE I PEE ++P+N EIS+ Y ++GE WDRN IVI++IF F+V
Sbjct: 118 KAPEXAHIEQEALEDPHIEQEVPEEAQIPENCEISVSYVHTGEKWDRNNIVINNIFAFQV 177
Query: 105 ATEISKGIDDDVEPRSINECRQRNDWPKWKDAIQ 4
A+E+ + D+D+EPR++ ECR RNDWPKWK+AIQ
Sbjct: 178 ASEVIRN-DEDLEPRNVEECRHRNDWPKWKEAIQ 210
>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
Length = 1501
Score = 123 bits (308), Expect = 3e-26
Identities = 68/164 (41%), Positives = 95/164 (57%), Gaps = 28/164 (17%)
Frame = -1
Query: 411 KVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDK---GSTLLQDSSTVI- 244
++ NES R KRGRP+GSKD+ PRKR++ E ++TD+ ++ D + ++
Sbjct: 835 QLTNESKIRLKRGRPVGSKDVTPRKRRTQEKLGTLEETIKMTDQFKIDKSIALDEAQIMQ 894
Query: 243 -VPEATII-----------------------TPEEEKVPDNNEISILYTYSGEMWDRNEI 136
PE I PEE +VP+N EIS+ Y GE WDRN I
Sbjct: 895 KAPEEVHIEQEAPEEAHIEQETPEDPHIEREAPEEAQVPENCEISVSYVQKGEKWDRNNI 954
Query: 135 VIDDIFTFKVATEISKGIDDDVEPRSINECRQRNDWPKWKDAIQ 4
VI++IF F+VA++I + D+D EPR++ ECR RNDWPKWK+AIQ
Sbjct: 955 VINNIFAFQVASDIIRN-DEDPEPRNVEECRHRNDWPKWKEAIQ 997
>emb|CAN60706.1| hypothetical protein VITISV_043852 [Vitis vinifera]
Length = 805
Score = 120 bits (302), Expect = 1e-25
Identities = 68/146 (46%), Positives = 88/146 (60%), Gaps = 10/146 (6%)
Frame = -1
Query: 411 KVANESAARQKRGRPIGSKDLIPRKRKSIEN-------SCPSNAPAEVTDKGSTLLQDSS 253
++ NES R KRGRP+GSKD+ PRKR++ E AP EV + +
Sbjct: 230 QLTNESKIRLKRGRPVGSKDVTPRKRRTQEKLGTLEEAQIMQKAPEEVHIEQEAPEEAHI 289
Query: 252 TVIVPEATII---TPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGI 82
PE I PEE +VP+N EISI Y +GE WDRN IVI++IF F+VA +I +
Sbjct: 290 EQETPEDPHIEREAPEEAQVPENCEISISYVQTGEKWDRNNIVINNIFAFQVAFDIIRN- 348
Query: 81 DDDVEPRSINECRQRNDWPKWKDAIQ 4
D+D EPR++ +CR RNDW KWK AIQ
Sbjct: 349 DEDPEPRNVEKCRHRNDWXKWKXAIQ 374
>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
Length = 779
Score = 120 bits (300), Expect = 3e-25
Identities = 67/135 (49%), Positives = 84/135 (62%), Gaps = 1/135 (0%)
Frame = -1
Query: 405 ANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKG-STLLQDSSTVIVPEAT 229
ANES KRGRPIGSKD PRKRK I + D G + QD + VI +
Sbjct: 269 ANESRPHLKRGRPIGSKDKNPRKRKGINDQ---------DDHGLKEISQDETQVITHDE- 318
Query: 228 IITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSINE 49
EE + NNEIS+ Y + + W+RN +VID+IF + VA EI + D+D EP+S++E
Sbjct: 319 ----EEVRTSQNNEISMNYVSTRKFWNRNNVVIDNIFAYNVAIEIMQQ-DEDSEPKSVHE 373
Query: 48 CRQRNDWPKWKDAIQ 4
CRQRNDWPKWKDAIQ
Sbjct: 374 CRQRNDWPKWKDAIQ 388
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 117 bits (293), Expect = 2e-24
Identities = 63/136 (46%), Positives = 81/136 (59%)
Frame = -1
Query: 411 KVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKGSTLLQDSSTVIVPEA 232
++ NES R KRGRP+GSKD+ IE P A E T P
Sbjct: 738 QLTNESKIRLKRGRPVGSKDV------HIEQEAPEEAHIE-----------QETPEDPHI 780
Query: 231 TIITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSIN 52
PEE +VP+N EIS+ Y +GE WDRN IVI++IF F+VA++I + D+D EPR++
Sbjct: 781 EREAPEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFAFQVASDIIRN-DEDPEPRNVE 839
Query: 51 ECRQRNDWPKWKDAIQ 4
ECR RNDWPKWK+ IQ
Sbjct: 840 ECRHRNDWPKWKEXIQ 855
>emb|CAN69058.1| hypothetical protein VITISV_022968 [Vitis vinifera]
Length = 830
Score = 110 bits (276), Expect = 2e-22
Identities = 62/163 (38%), Positives = 93/163 (57%), Gaps = 28/163 (17%)
Frame = -1
Query: 408 VANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDK----GSTLLQDSSTV-- 247
+ NES R K G+P+ SKD+ P K+++ E ++TD+ S L+++ +
Sbjct: 391 LTNESKIRLKHGKPVSSKDVTPWKKRTQEKLGTLEEAIKMTDQFKIDKSIALEEAQIMQK 450
Query: 246 ---------IVPEATII-------------TPEEEKVPDNNEISILYTYSGEMWDRNEIV 133
PE I TPEE ++P+N EIS+ Y ++GE WDRN IV
Sbjct: 451 APKEAHIEQEAPEKAHIEQETPKDPHIERETPEEVQIPENCEISVSYVHTGEKWDRNNIV 510
Query: 132 IDDIFTFKVATEISKGIDDDVEPRSINECRQRNDWPKWKDAIQ 4
I++IF F+VA+E+ + +D +PR++ ECR RNDWPKWK+AIQ
Sbjct: 511 INNIFAFQVASEVIRNYEDP-KPRNMEECRHRNDWPKWKEAIQ 552
>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
Length = 701
Score = 110 bits (274), Expect = 3e-22
Identities = 58/136 (42%), Positives = 83/136 (61%), Gaps = 12/136 (8%)
Frame = -1
Query: 375 GRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKGSTLLQDSSTVIVPEATII--------- 223
GRP+ SKD+ PRKR++ E ++TD+ + ++ + EA I+
Sbjct: 57 GRPVSSKDVTPRKRRTQEKLGTLEETIKMTDQ----FKIDKSIGLEEAQIMZKAXEEAHI 112
Query: 222 ---TPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSIN 52
P E VP+N EISI Y +GE WDRN I+I++IF F+VA++I + +D EPR++
Sbjct: 113 EQXAPXEAXVPENCEISISYVQTGEKWDRNNIIINNIFAFQVASDIIRNXEDP-EPRNVE 171
Query: 51 ECRQRNDWPKWKDAIQ 4
ECR RNDWPKWK+AIQ
Sbjct: 172 ECRHRNDWPKWKEAIQ 187
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 104 bits (260), Expect = 1e-20
Identities = 60/139 (43%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Frame = -1
Query: 408 VANESAARQKRGRPIGSKDLIPRKRKSIENSCPS----NAPAEVTDKGSTLLQDSSTVIV 241
+A +A +KRGRPIGS+D PRK+ S+ + P N P+ +Q++S
Sbjct: 834 MARPTAPARKRGRPIGSRDSRPRKKASLAQNNPLIIDINNPSHENIPDYGYVQETSLGDA 893
Query: 240 PEATIITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPR 61
P + E P+N EISI YT EM DRN + IDD F + +A I + DD+EPR
Sbjct: 894 PMS-------EPTPENREISINYTSVHEMMDRNSMAIDDAFAYHIAKGIIEY--DDIEPR 944
Query: 60 SINECRQRNDWPKWKDAIQ 4
S+ EC++R DWPKWKDAIQ
Sbjct: 945 SVEECQRRADWPKWKDAIQ 963
>gb|AAD15380.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 557
Score = 100 bits (250), Expect = 2e-19
Identities = 60/137 (43%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
Frame = -1
Query: 414 NKVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKGSTLLQDSSTVIVPE 235
N+ NES KRGRPIGSKD PRKRK + +T++ S PE
Sbjct: 242 NQTVNESKTCLKRGRPIGSKDKNPRKRKGAKIGIGKTEDI-ITNEES-----------PE 289
Query: 234 ATI-ITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRS 58
++ +T +E +VPDN EISI Y SG W++ +I I DIF VA ++ +D+D EP S
Sbjct: 290 ESLDMTHKEIQVPDNEEISITYVMSGIKWNQKQIDIHDIFACNVAVDV---MDEDHEPTS 346
Query: 57 INECRQRNDWPKWKDAI 7
I EC Q +DWPKW +AI
Sbjct: 347 IEECTQISDWPKWNEAI 363
>emb|CAN72468.1| hypothetical protein VITISV_006796 [Vitis vinifera]
Length = 279
Score = 100 bits (249), Expect = 2e-19
Identities = 44/72 (61%), Positives = 58/72 (80%)
Frame = -1
Query: 219 PEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSINECRQ 40
PEE +VP+N EIS+ Y +GE WDRN IVI++IF F+VA++I + D+D EPR++ ECR
Sbjct: 53 PEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFAFQVASDIIRN-DEDPEPRNVEECRH 111
Query: 39 RNDWPKWKDAIQ 4
RNDWPKWK+AIQ
Sbjct: 112 RNDWPKWKEAIQ 123
>emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]
Length = 1383
Score = 96.3 bits (238), Expect = 4e-18
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 12/139 (8%)
Frame = -1
Query: 411 KVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKGSTLLQDSSTVIVPEA 232
++ NES R KRGRP+GSKD+ PRKR++ E ++TD+ ++ ++ + EA
Sbjct: 787 QLTNESKIRLKRGRPVGSKDVTPRKRRTQEKLGTLEDTIKMTDQ----VKIDKSIALEEA 842
Query: 231 TII------------TPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISK 88
I+ PEE +VP+N EIS+ Y +GE WDRN IVI++IF F+V ++I +
Sbjct: 843 QIMQKTLEEAHIEQEAPEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFAFQVTSDIIR 902
Query: 87 GIDDDVEPRSINECRQRND 31
D+D EPR++ E + D
Sbjct: 903 N-DEDPEPRNVEEFQTPED 920
>emb|CAN61562.1| hypothetical protein VITISV_039565 [Vitis vinifera]
Length = 1316
Score = 94.4 bits (233), Expect = 1e-17
Identities = 55/140 (39%), Positives = 78/140 (55%)
Frame = -1
Query: 423 QIPNKVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKGSTLLQDSSTVI 244
Q+ N + NE R KRGRPI SKDLIPRKRK S KGS +
Sbjct: 765 QLENAIXNEXKTRLKRGRPISSKDLIPRKRKGTTYEKLSTLEEFTNMKGSNGEIQLDKQL 824
Query: 243 VPEATIITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEP 64
PE I +++ + I + +GE D ++I+I +IF F+VA +I + D+ EP
Sbjct: 825 APEEAQI----DQISVSRTKKIXMSXTGETKDYSDIIIXNIFAFQVAMDIMRN-DEYQEP 879
Query: 63 RSINECRQRNDWPKWKDAIQ 4
+++NECR+ ND PKWK++IQ
Sbjct: 880 QTVNECRKMNDXPKWKESIQ 899
>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
Length = 570
Score = 93.6 bits (231), Expect = 3e-17
Identities = 55/136 (40%), Positives = 74/136 (54%)
Frame = -1
Query: 411 KVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKGSTLLQDSSTVIVPEA 232
++ NES KRGR +GSKD P + I EA
Sbjct: 58 QLKNESKICLKRGRLVGSKDKTPEEAH----------------------------IEREA 89
Query: 231 TIITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSIN 52
EE + P+N EISI Y ++GE WD N IVI++IF F+VA++I + +D++PRS+
Sbjct: 90 L----EEAQEPENCEISISYVHTGEKWDWNNIVINNIFAFQVASDIIRNY-EDLKPRSVE 144
Query: 51 ECRQRNDWPKWKDAIQ 4
ECR RNDWPKWK+ IQ
Sbjct: 145 ECRHRNDWPKWKEVIQ 160
>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
Length = 1141
Score = 92.8 bits (229), Expect = 4e-17
Identities = 58/136 (42%), Positives = 77/136 (56%)
Frame = -1
Query: 414 NKVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKGSTLLQDSSTVIVPE 235
N +A ES ++KRGRP+GSKD IPRK K E D + ++ I +
Sbjct: 502 NVIATESNPQKKRGRPVGSKDKIPRKTKK---GAMGTEVKETIDMAAASPKEPPNEI-RD 557
Query: 234 ATIITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSI 55
A PE DN+EISI Y SG W+R E+ +D+ F ++VA EI+ +D EP SI
Sbjct: 558 AEAHGPEGI---DNDEISINYIMSGIKWNRKEVDVDEKFAYEVAYEIN----EDHEPTSI 610
Query: 54 NECRQRNDWPKWKDAI 7
EC QR+DW KWK+AI
Sbjct: 611 IECTQRSDWLKWKEAI 626
>emb|CAN72203.1| hypothetical protein VITISV_001820 [Vitis vinifera]
Length = 475
Score = 92.8 bits (229), Expect = 4e-17
Identities = 59/140 (42%), Positives = 81/140 (57%)
Frame = -1
Query: 423 QIPNKVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKGSTLLQDSSTVI 244
Q+ N +ANES R K GR I SKDLI RK+K S KGS +
Sbjct: 156 QLENAIANESKTRLKCGRLIDSKDLILRKKKRTTYEKLSTLEEFTNMKGSNDETQLDKQL 215
Query: 243 VPEATIITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEP 64
PE I ++ V EIS+ +T GE DRN+I+I++IF F+VA +I + D+ EP
Sbjct: 216 GPEEAQI--DQISVSRTEEISMSHT--GETKDRNDIIINNIFAFQVAMDIMRN-DECQEP 270
Query: 63 RSINECRQRNDWPKWKDAIQ 4
+++NEC++ ND PKWK+AIQ
Sbjct: 271 QTVNECQKMNDLPKWKEAIQ 290
>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 89.0 bits (219), Expect = 6e-16
Identities = 57/136 (41%), Positives = 75/136 (55%)
Frame = -1
Query: 414 NKVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKGSTLLQDSSTVIVPE 235
N +A ES ++K GRP+GSKD PRK K E D + ++ I +
Sbjct: 502 NVIATESNPQKKHGRPVGSKDKNPRKTKK---GVMGTEVKETIDMAAASPKEPPNEI-RD 557
Query: 234 ATIITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSI 55
A PE DN+EISI Y SG W+R E+ +D+ F ++VA EIS +D EP SI
Sbjct: 558 AEAHGPEGI---DNDEISINYIMSGIKWNRKEVDVDEKFAYEVAYEIS----EDHEPTSI 610
Query: 54 NECRQRNDWPKWKDAI 7
EC QR+DW KWK+AI
Sbjct: 611 IECTQRSDWLKWKEAI 626
>gb|AEL30347.1| copia-like polyprotein [Arachis hypogaea]
Length = 692
Score = 87.8 bits (216), Expect = 1e-15
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Frame = -1
Query: 411 KVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTD-KGSTLLQDSSTVIVPE 235
++A E+ RQKRGRP+ SKD PRKRK + P E K ++Q+S ++ PE
Sbjct: 135 QIATETNTRQKRGRPVSSKDKNPRKRKEVYT-----IPVEKDIVKTPAVVQNSDIILTPE 189
Query: 234 ATIITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSI 55
+ WDRN+ ++++IF + VA I + + D+EPR +
Sbjct: 190 HV-----------------------QKWDRNKTIVNEIFAYNVALNIMQE-NKDLEPRLV 225
Query: 54 NECRQRNDWPKWKDAIQ 4
ECRQ+NDWPKWK+ ++
Sbjct: 226 EECRQKNDWPKWKEVMK 242
>emb|CAN76012.1| hypothetical protein VITISV_020948 [Vitis vinifera]
Length = 550
Score = 87.8 bits (216), Expect = 1e-15
Identities = 48/136 (35%), Positives = 68/136 (50%)
Frame = -1
Query: 411 KVANESAARQKRGRPIGSKDLIPRKRKSIENSCPSNAPAEVTDKGSTLLQDSSTVIVPEA 232
++ NES R KRGRP+G KD++
Sbjct: 376 QLTNESKIRLKRGRPVGLKDVL-------------------------------------- 397
Query: 231 TIITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSIN 52
+N EIS+ Y ++ E WDRN IVI++IF F+VA+ + + D+D EP+++
Sbjct: 398 -----------ENCEISVSYVHTREKWDRNNIVINNIFAFQVASRVIRN-DEDPEPQNVE 445
Query: 51 ECRQRNDWPKWKDAIQ 4
ECR RNDWPKWK+AIQ
Sbjct: 446 ECRHRNDWPKWKEAIQ 461
>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
Length = 1291
Score = 86.3 bits (212), Expect = 4e-15
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Frame = -1
Query: 387 RQKRGRPIGSKDLIPRKRK--SIENSCPSN----APAEVTDKGSTLLQ-DSSTVIVPEAT 229
RQKRGRP+G+KDL PRK + I S P N E ++ L + ++ P+
Sbjct: 530 RQKRGRPVGAKDLNPRKTRIGKISQSLPKNFSRPEDGEPSESARALNKLNTGNAEHPDQN 589
Query: 228 IITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSINE 49
I+ + + V N E +I + +GE ++R+ IV+DD F + VA I + D EP+SI E
Sbjct: 590 ILGNDNDLVDINIETAINFVDTGETYNRDLIVVDDTFAYAVAHNIPHN-NLDPEPKSITE 648
Query: 48 CRQRNDWPKWKDAIQ 4
C++R DW KWK+AI+
Sbjct: 649 CQKRPDWLKWKEAIE 663
>gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]
Length = 1190
Score = 86.3 bits (212), Expect = 4e-15
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Frame = -1
Query: 387 RQKRGRPIGSKDLIPRKRK--SIENSCPSN----APAEVTDKGSTLLQ-DSSTVIVPEAT 229
RQKRGRP+G+KDL PRK + I S P N E ++ L + ++ P+
Sbjct: 530 RQKRGRPVGAKDLNPRKTRIGKISQSLPKNFSRPEDGEPSESARALNKLNTGNAEHPDQN 589
Query: 228 IITPEEEKVPDNNEISILYTYSGEMWDRNEIVIDDIFTFKVATEISKGIDDDVEPRSINE 49
I+ + + V N E +I + +GE ++R+ IV+DD F + VA I + D EP+SI E
Sbjct: 590 ILGNDNDLVDINIETAINFVDTGETYNRDLIVVDDTFAYAVAHNIPHN-NLDPEPKSITE 648
Query: 48 CRQRNDWPKWKDAIQ 4
C++R DW KWK+AI+
Sbjct: 649 CQKRPDWLKWKEAIE 663