BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00028091
         (1524 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...   743   0.0  
ref|XP_007019173.1| Tetratricopeptide repeat (TPR)-like superfam...   741   0.0  
ref|XP_007224224.1| hypothetical protein PRUPE_ppa017885mg [Prun...   724   0.0  
ref|XP_002307458.2| pentatricopeptide repeat-containing family p...   707   0.0  
ref|XP_004300124.1| PREDICTED: pentatricopeptide repeat-containi...   706   0.0  
ref|XP_002520317.1| pentatricopeptide repeat-containing protein,...   704   0.0  
ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containi...   704   0.0  
ref|XP_007137466.1| hypothetical protein PHAVU_009G129200g [Phas...   703   0.0  
ref|XP_006434266.1| hypothetical protein CICLE_v10000990mg [Citr...   703   0.0  
ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containi...   701   0.0  
ref|XP_006340242.1| PREDICTED: pentatricopeptide repeat-containi...   694   0.0  
gb|EYU18727.1| hypothetical protein MIMGU_mgv1a027101mg [Mimulus...   691   0.0  
ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containi...   691   0.0  
ref|XP_004502524.1| PREDICTED: pentatricopeptide repeat-containi...   689   0.0  
ref|XP_004251179.1| PREDICTED: pentatricopeptide repeat-containi...   687   0.0  
ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containi...   680   0.0  
gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thal...   672   0.0  
ref|NP_177860.2| pentatricopeptide repeat-containing protein [Ar...   672   0.0  
ref|XP_002889139.1| pentatricopeptide repeat-containing protein ...   671   0.0  
ref|XP_006301167.1| hypothetical protein CARUB_v10021564mg, part...   668   0.0  

>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  743 bits (1917), Expect = 0.0
 Identities = 367/430 (85%), Positives = 395/430 (91%)
 Frame = -3

Query: 1291 SSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQ 1112
            SS E IK+T+D TK ICK+M+SCPK  LDT L++SGIRVSP +VE+VLKRFENAGMLAYQ
Sbjct: 3    SSGEIIKETADPTKRICKIMISCPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQ 62

Query: 1111 FFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYA 932
            FFEWAGKQRNY HSIRAYHTMIESLAKIRQYQIMWDLVN MRS  +LNVETFCII+RKYA
Sbjct: 63   FFEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYA 122

Query: 931  RTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFIPDSKT 752
            R+QKV+EAVYTFN+MEKYDVPPNLAAFN LLSALCKSKNV KAQEIF+ MKD+FIPDSKT
Sbjct: 123  RSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKT 182

Query: 751  YSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMD 572
            YSILLEGWGKAPNLPKAREIFREMVDMGC PDIVTYGIMVDILCKAGRVDEA+ IVK+MD
Sbjct: 183  YSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMD 242

Query: 571  SRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIRADVAVYNALIGAFCKVNKFK 392
            S VCKPTSFIYSVLVHTYGIENRIEDAV TFL MERN I ADVAVYNALIGAFCKVNK K
Sbjct: 243  SSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLK 302

Query: 391  NVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRVFRRMIKVCEPDADTYTMMIK 212
            N  RVL+EMD KG+ PNSRTCNIILNSLI    TDEAFRVFRRMIKVC+PDADTYTMMIK
Sbjct: 303  NAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDADTYTMMIK 362

Query: 211  MFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCERGNVTKASVLLEEMIEKGIRP 32
            MFCE DKL+MALKVWKYM+LKQFVPSMHTFSVLINGLC++GN +KA +LLEEMIEKGIRP
Sbjct: 363  MFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRP 422

Query: 31   SGVTFGRLRQ 2
            S VTFG+L+Q
Sbjct: 423  SSVTFGKLKQ 432



 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 3/182 (1%)
 Frame = -3

Query: 1090 QRNYVHS-IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKV 917
            +RN + + +  Y+ +I +  K+ + +  + ++N M   G+  N  T  II+         
Sbjct: 277  ERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDT 336

Query: 916  EEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMK-DRFIPDSKTYSIL 740
            +EA   F  M K    P+   +  ++   C++  +  A +++  M+  +F+P   T+S+L
Sbjct: 337  DEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVL 395

Query: 739  LEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVC 560
            + G  K  N  KA  +  EM++ G  P  VT+G +  +L K GR D    + + M+  V 
Sbjct: 396  INGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVK 455

Query: 559  KP 554
            +P
Sbjct: 456  EP 457


>ref|XP_007019173.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
            [Theobroma cacao] gi|590599410|ref|XP_007019174.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein
            isoform 1 [Theobroma cacao]
            gi|590599414|ref|XP_007019175.1| Tetratricopeptide repeat
            (TPR)-like superfamily protein isoform 1 [Theobroma
            cacao] gi|590599418|ref|XP_007019176.1| Tetratricopeptide
            repeat (TPR)-like superfamily protein isoform 1
            [Theobroma cacao] gi|590599423|ref|XP_007019177.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein
            isoform 1 [Theobroma cacao] gi|508724501|gb|EOY16398.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein
            isoform 1 [Theobroma cacao] gi|508724502|gb|EOY16399.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein
            isoform 1 [Theobroma cacao] gi|508724503|gb|EOY16400.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein
            isoform 1 [Theobroma cacao] gi|508724504|gb|EOY16401.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein
            isoform 1 [Theobroma cacao] gi|508724505|gb|EOY16402.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein
            isoform 1 [Theobroma cacao]
          Length = 480

 Score =  741 bits (1912), Expect = 0.0
 Identities = 360/450 (80%), Positives = 404/450 (89%)
 Frame = -3

Query: 1351 VLHCYRNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVS 1172
            V  C+ NKL L  +VL R   SSE  +D  D++K ICK+MMS     L+T L+QSG+RV 
Sbjct: 4    VFKCH-NKLLLGWIVLVRRSYSSEPTRDVLDTSKKICKIMMSSSPVVLNTALDQSGLRVP 62

Query: 1171 PDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNS 992
            P++VEDVLKRFENAGMLAY+FFEWA KQRNY+HSIRAYHTMIESLAKIRQYQIMWDLVN 
Sbjct: 63   PEVVEDVLKRFENAGMLAYRFFEWAEKQRNYMHSIRAYHTMIESLAKIRQYQIMWDLVNK 122

Query: 991  MRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNV 812
            MR+  MLNVETFCII+R+YAR QKVEE VYTFN+MEKYDVPPNLAAFNGLLS LCKSKNV
Sbjct: 123  MRNKSMLNVETFCIIMRRYARVQKVEETVYTFNIMEKYDVPPNLAAFNGLLSTLCKSKNV 182

Query: 811  RKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMV 632
            RKAQEIFD MKDRF+PDSKTYSILLEGWG+APNLPKAREIFREMVDMGC PDIVTYGIMV
Sbjct: 183  RKAQEIFDKMKDRFVPDSKTYSILLEGWGRAPNLPKAREIFREMVDMGCDPDIVTYGIMV 242

Query: 631  DILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIR 452
            DILCK+GRVDEA+EIV++MDS  C+PTSFIYSVLVHTYGIENRIEDAV+ FL+MERNGI+
Sbjct: 243  DILCKSGRVDEAIEIVREMDSNGCRPTSFIYSVLVHTYGIENRIEDAVDAFLEMERNGIK 302

Query: 451  ADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRV 272
            ADV VYNALIGAFCKVNK KNV RVL+EMD KGV PN+RTCNIILNSLIGR +TDEAF+V
Sbjct: 303  ADVVVYNALIGAFCKVNKLKNVYRVLNEMDSKGVAPNARTCNIILNSLIGRGETDEAFKV 362

Query: 271  FRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCER 92
            FRRMIK CEPDADTYT+MIKMFC++D+L MA KVWKYM+LKQF+P+MHTFSVLI+GLCE+
Sbjct: 363  FRRMIKECEPDADTYTIMIKMFCDRDELDMAFKVWKYMRLKQFIPTMHTFSVLIHGLCEK 422

Query: 91   GNVTKASVLLEEMIEKGIRPSGVTFGRLRQ 2
            GN  KA +LLEEM+EKGI+PSG+TFGRLRQ
Sbjct: 423  GNAAKACILLEEMLEKGIQPSGLTFGRLRQ 452



 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 45/182 (24%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
 Frame = -3

Query: 1090 QRNYVHS-IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKV 917
            +RN + + +  Y+ +I +  K+ + + ++ ++N M S G+  N  T  II+       + 
Sbjct: 297  ERNGIKADVVVYNALIGAFCKVNKLKNVYRVLNEMDSKGVAPNARTCNIILNSLIGRGET 356

Query: 916  EEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMK-DRFIPDSKTYSIL 740
            +EA   F  M K +  P+   +  ++   C    +  A +++  M+  +FIP   T+S+L
Sbjct: 357  DEAFKVFRRMIK-ECEPDADTYTIMIKMFCDRDELDMAFKVWKYMRLKQFIPTMHTFSVL 415

Query: 739  LEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVC 560
            + G  +  N  KA  +  EM++ G  P  +T+G +  +L K GR D    + + M+  + 
Sbjct: 416  IHGLCEKGNAAKACILLEEMLEKGIQPSGLTFGRLRQLLIKEGREDVLKFLQEKMNLLIK 475

Query: 559  KP 554
            +P
Sbjct: 476  EP 477


>ref|XP_007224224.1| hypothetical protein PRUPE_ppa017885mg [Prunus persica]
            gi|462421160|gb|EMJ25423.1| hypothetical protein
            PRUPE_ppa017885mg [Prunus persica]
          Length = 464

 Score =  724 bits (1870), Expect = 0.0
 Identities = 349/436 (80%), Positives = 393/436 (90%)
 Frame = -3

Query: 1309 VLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENA 1130
            +L+R YSSSE I+  SD TK ICK+MMSCP   LDT L+QSGIR+SP++VE+VL RF+NA
Sbjct: 1    MLSRKYSSSEHIRQFSDPTKAICKIMMSCPTLALDTALDQSGIRISPEMVEEVLMRFQNA 60

Query: 1129 GMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCI 950
            GM+AY+FFEWAGKQRNY HS++AYH MIESLAKIRQYQIMW+LVNSMR+  M N+ETF I
Sbjct: 61   GMVAYRFFEWAGKQRNYTHSVKAYHAMIESLAKIRQYQIMWELVNSMRAKRMQNMETFSI 120

Query: 949  IIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRF 770
            I+RKYAR QKVEEA+YTFNVMEKYD  PNLAAFNGLLSALCKSKNVRKAQEIFD MKDRF
Sbjct: 121  IMRKYARAQKVEEALYTFNVMEKYDCAPNLAAFNGLLSALCKSKNVRKAQEIFDKMKDRF 180

Query: 769  IPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALE 590
             PDSKTYSIL++GWGK PNLPKARE+FREM D GC+PDIVTYGIMVD+LCKAGRVDEA+E
Sbjct: 181  EPDSKTYSILIDGWGKDPNLPKAREVFREMTDAGCNPDIVTYGIMVDVLCKAGRVDEAIE 240

Query: 589  IVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIRADVAVYNALIGAFC 410
            IV+ MD   C PTSFIYSVLVHTYG+E+RIEDAV+ FL+MERNGI+ADV VYNALIGAFC
Sbjct: 241  IVRGMDDSGCTPTSFIYSVLVHTYGVEHRIEDAVDAFLEMERNGIKADVVVYNALIGAFC 300

Query: 409  KVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRVFRRMIKVCEPDADT 230
            K NKFKNV RVL++MD KGV PNSRTCNIILNSLI R +TDEAF VFR+MIK+CEPDADT
Sbjct: 301  KANKFKNVYRVLNDMDSKGVKPNSRTCNIILNSLIDRGETDEAFSVFRKMIKLCEPDADT 360

Query: 229  YTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCERGNVTKASVLLEEMI 50
            YTMMIKMFCEKD+L+MALKVWKYMK ++FVPSMHT+SVLINGLCE+GN +KA V LEEMI
Sbjct: 361  YTMMIKMFCEKDELEMALKVWKYMKQRRFVPSMHTYSVLINGLCEKGNTSKACVFLEEMI 420

Query: 49   EKGIRPSGVTFGRLRQ 2
            EKGIRP+GVTFGRLRQ
Sbjct: 421  EKGIRPAGVTFGRLRQ 436



 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
 Frame = -3

Query: 1090 QRNYVHS-IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKV 917
            +RN + + +  Y+ +I +  K  +++ ++ ++N M S G+  N  T  II+       + 
Sbjct: 281  ERNGIKADVVVYNALIGAFCKANKFKNVYRVLNDMDSKGVKPNSRTCNIILNSLIDRGET 340

Query: 916  EEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDR-FIPDSKTYSIL 740
            +EA   F  M K    P+   +  ++   C+   +  A +++  MK R F+P   TYS+L
Sbjct: 341  DEAFSVFRKMIKL-CEPDADTYTMMIKMFCEKDELEMALKVWKYMKQRRFVPSMHTYSVL 399

Query: 739  LEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVD 602
            + G  +  N  KA     EM++ G  P  VT+G +  +L K GR D
Sbjct: 400  INGLCEKGNTSKACVFLEEMIEKGIRPAGVTFGRLRQLLIKEGRED 445


>ref|XP_002307458.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550339385|gb|EEE94454.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 478

 Score =  707 bits (1826), Expect = 0.0
 Identities = 350/436 (80%), Positives = 390/436 (89%)
 Frame = -3

Query: 1309 VLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENA 1130
            +L R Y SSET    SD+TK ICK+MMS     LDT L+QSG+RVS  IV+DVLK+FENA
Sbjct: 18   MLKRRYMSSET----SDTTKTICKIMMSSSVVTLDTALDQSGVRVSEQIVDDVLKKFENA 73

Query: 1129 GMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCI 950
            GM+AY+FFEWA KQR+Y HS++A+HT+I+SLAKIRQYQ+MWD+V  M+S  M+NVETFCI
Sbjct: 74   GMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRMVNVETFCI 133

Query: 949  IIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRF 770
            I+RKYAR QKVEEAVYTFN+M+KYDVPPNLAAFNGLLSALCKSKNVRKAQEIFD++KDRF
Sbjct: 134  IMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRF 193

Query: 769  IPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALE 590
            +PDSKTYSILLEGWGK PNLPKAREIFREMV  GC PDIVTYGIMVD+LCKAGRVDEAL 
Sbjct: 194  VPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALG 253

Query: 589  IVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIRADVAVYNALIGAFC 410
            IV +MDS VCKPT FIYSVLVHTYGIENRIEDAV TFL+ME NGI  DVAVYNALIGAFC
Sbjct: 254  IVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFC 313

Query: 409  KVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRVFRRMIKVCEPDADT 230
            K N+ KNV RVL+EMD KGV PNSRT NIIL+SLIGR +TDEA+RVF RMIKVCEPDADT
Sbjct: 314  KANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVCEPDADT 373

Query: 229  YTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCERGNVTKASVLLEEMI 50
            YTMMIKMFCE+D+LK ALKVWKYMKLK+F+PSMHTF VLINGLCE+G+VT+A VLLEEMI
Sbjct: 374  YTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMI 433

Query: 49   EKGIRPSGVTFGRLRQ 2
            EKGIRPSGVTFGRLRQ
Sbjct: 434  EKGIRPSGVTFGRLRQ 449



 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 58/313 (18%), Positives = 132/313 (42%), Gaps = 35/313 (11%)
 Frame = -3

Query: 1072 SIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFN 893
            ++ A++ ++ +L K +  +   ++ +S++   + + +T+ I++  + +   + +A   F 
Sbjct: 162  NLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFR 221

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 716
             M      P++  +  ++  LCK+  V +A  I + M      P    YS+L+  +G   
Sbjct: 222  EMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIEN 281

Query: 715  NLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSR---------- 566
             +  A   F EM + G  PD+  Y  ++   CKA R+     ++ +MD +          
Sbjct: 282  RIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFN 341

Query: 565  ------------------------VCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNG 458
                                    VC+P +  Y++++  +   + ++ A++ +  M+   
Sbjct: 342  IILSSLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKR 401

Query: 457  IRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAF 278
                +  +  LI   C+         +L+EM +KG+ P+  T    L  L+ +E  ++  
Sbjct: 402  FMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFG-RLRQLLIKEGREDVL 460

Query: 277  RVFRRMIKVCEPD 239
            +  ++ I V   D
Sbjct: 461  KFLQKKINVLVND 473



 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
 Frame = -3

Query: 1069 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKVEEAVYTFN 893
            +  Y+ +I +  K  + + ++ ++N M   G+  N  TF II+       + +EA   F 
Sbjct: 302  VAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFL 361

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMK-DRFIPDSKTYSILLEGWGKAP 716
             M K    P+   +  ++   C+   ++KA +++  MK  RF+P   T+ +L+ G  +  
Sbjct: 362  RMIKV-CEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKG 420

Query: 715  NLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKP 554
            ++ +A  +  EM++ G  P  VT+G +  +L K GR D    + K ++  V  P
Sbjct: 421  DVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGREDVLKFLQKKINVLVNDP 474


>ref|XP_004300124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 484

 Score =  706 bits (1821), Expect = 0.0
 Identities = 341/456 (74%), Positives = 398/456 (87%), Gaps = 1/456 (0%)
 Frame = -3

Query: 1366 LDKMIVLHCYRNKLCLQRLVLTRLYSSSETIKDTSDS-TKGICKVMMSCPKSGLDTVLNQ 1190
            ++ +I +     KL  + +VL+R YSS E  +  +D  TK ICK+MMSCP   LDT L+Q
Sbjct: 1    MNMIIKIKSCGEKLGFRWMVLSRNYSSCEATRHIADDPTKRICKIMMSCPTLALDTALDQ 60

Query: 1189 SGIRVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIM 1010
            SG+R+SP+IVEDVL RF+NAGM+AY+FFEWAGKQRNY HS++AYH MI+SLAKIRQYQIM
Sbjct: 61   SGVRISPEIVEDVLVRFKNAGMVAYRFFEWAGKQRNYTHSVKAYHAMIDSLAKIRQYQIM 120

Query: 1009 WDLVNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSAL 830
            W+LVNSMR+  M N+ETF II+RKYAR QKVEEA+YTFNVMEKYD  PNLAAFN LLSAL
Sbjct: 121  WELVNSMRTQRMQNMETFSIIMRKYARAQKVEEALYTFNVMEKYDCAPNLAAFNDLLSAL 180

Query: 829  CKSKNVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIV 650
            CKSKNVRKAQEIFD MKDRF+PDSKT+SIL++GWGK PNLPKARE++REMVD GC PDIV
Sbjct: 181  CKSKNVRKAQEIFDKMKDRFVPDSKTFSILIDGWGKDPNLPKAREVYREMVDAGCIPDIV 240

Query: 649  TYGIMVDILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQM 470
            TYGIMVD+LCKAGRVDE +EIV+ M +  C PTSFIYSVLVHTYG+E+RIEDAVE FL+M
Sbjct: 241  TYGIMVDVLCKAGRVDEGIEIVRGMVASGCMPTSFIYSVLVHTYGVEDRIEDAVEAFLEM 300

Query: 469  ERNGIRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQT 290
            ERNGI+ADVA+YNALIGAFCKVNKFKNV RVL +M  K V+PNSRTCNIIL+SLI R +T
Sbjct: 301  ERNGIKADVAIYNALIGAFCKVNKFKNVYRVLSDMKSKAVVPNSRTCNIILHSLIDRGET 360

Query: 289  DEAFRVFRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLI 110
            DEAF VFR+MIK+C+PDADTYTMMIKMFCE++KL+MA K+WKYMK+KQF+PSMHT+SVLI
Sbjct: 361  DEAFSVFRKMIKICDPDADTYTMMIKMFCERNKLEMASKLWKYMKMKQFIPSMHTYSVLI 420

Query: 109  NGLCERGNVTKASVLLEEMIEKGIRPSGVTFGRLRQ 2
            NGLCE GN +KA VLLEEM+EKGIRPSGV FG+LRQ
Sbjct: 421  NGLCENGNASKACVLLEEMVEKGIRPSGVMFGKLRQ 456



 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 47/185 (25%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
 Frame = -3

Query: 1090 QRNYVHS-IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKV 917
            +RN + + +  Y+ +I +  K+ +++ ++ +++ M+S  ++ N  T  II+       + 
Sbjct: 301  ERNGIKADVAIYNALIGAFCKVNKFKNVYRVLSDMKSKAVVPNSRTCNIILHSLIDRGET 360

Query: 916  EEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMK-DRFIPDSKTYSIL 740
            +EA   F  M K    P+   +  ++   C+   +  A +++  MK  +FIP   TYS+L
Sbjct: 361  DEAFSVFRKMIKI-CDPDADTYTMMIKMFCERNKLEMASKLWKYMKMKQFIPSMHTYSVL 419

Query: 739  LEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVC 560
            + G  +  N  KA  +  EMV+ G  P  V +G +  +L K GR ++ L+ +++  + + 
Sbjct: 420  INGLCENGNASKACVLLEEMVEKGIRPSGVMFGKLRQLLIKEGR-EDVLKFLQEKINLMV 478

Query: 559  KPTSF 545
            K  SF
Sbjct: 479  KEPSF 483


>ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540536|gb|EEF42103.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 439

 Score =  704 bits (1818), Expect = 0.0
 Identities = 342/410 (83%), Positives = 379/410 (92%)
 Frame = -3

Query: 1234 MMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYH 1055
            MMS P   L T L+Q+GIRVSP+IVEDVL+RFENAGM+AY+FFEWA KQ +Y HS+RAYH
Sbjct: 1    MMSSPAVTLHTALDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYH 60

Query: 1054 TMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYD 875
            TMIESLAKIRQYQIMWDL+N+M+   MLNVETFCII+RKYAR QK+EEAVYTFNVMEKYD
Sbjct: 61   TMIESLAKIRQYQIMWDLINAMKRKRMLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYD 120

Query: 874  VPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKARE 695
            VPPNLAAFNGL SALCKSKNVRKAQEIFD+ KDRF+PDSKTY+ILLEGWGK PNLPKARE
Sbjct: 121  VPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKARE 180

Query: 694  IFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYG 515
            IFREMVD+GCSPDIVTYGIMVDILCKAGRVDEAL+IVK+MD  +CKPTSFIYSVL+HTYG
Sbjct: 181  IFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYG 240

Query: 514  IENRIEDAVETFLQMERNGIRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSR 335
            IENRIEDAV+TFL ME+NG++ADVA YNALIGAFCKVNKFKNV RVL+EMD KG+ PNSR
Sbjct: 241  IENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSR 300

Query: 334  TCNIILNSLIGREQTDEAFRVFRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMK 155
            T NIILN+LI R +TDEAFRVFRRMIKVCEPDADTYTMMIKMFCE+++L+MALKVWKYMK
Sbjct: 301  TLNIILNNLIARGETDEAFRVFRRMIKVCEPDADTYTMMIKMFCERNELEMALKVWKYMK 360

Query: 154  LKQFVPSMHTFSVLINGLCERGNVTKASVLLEEMIEKGIRPSGVTFGRLR 5
             K FVPSMHTFSVLINGLCE G+V+ A V+LE+MIEKGIRPSGVTFGRLR
Sbjct: 361  KKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLR 410



 Score = 66.6 bits (161), Expect = 3e-08
 Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 36/239 (15%)
 Frame = -3

Query: 1069 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVE-TFCIIIRKYARTQKVEEAVYTFN 893
            I  Y  M++ L K  +     D+V  M           + ++I  Y    ++E+AV TF 
Sbjct: 194  IVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFL 253

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI------------------ 767
             MEK  V  ++AA+N L+ A CK    +    + + M  + +                  
Sbjct: 254  GMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARG 313

Query: 766  -----------------PDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGI 638
                             PD+ TY+++++ + +   L  A ++++ M      P + T+ +
Sbjct: 314  ETDEAFRVFRRMIKVCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSV 373

Query: 637  MVDILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERN 461
            +++ LC+ G V  A  +++DM  +  +P+   +  L H    E R ED +E FLQ + N
Sbjct: 374  LINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGR-EDVLE-FLQQKIN 430


>ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X2 [Glycine max]
            gi|571460055|ref|XP_006581592.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X3 [Glycine max]
            gi|571460057|ref|XP_006581593.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X4 [Glycine max]
            gi|571460059|ref|XP_006581594.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X5 [Glycine max]
            gi|571460061|ref|XP_006581595.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X6 [Glycine max]
          Length = 481

 Score =  704 bits (1816), Expect = 0.0
 Identities = 336/453 (74%), Positives = 399/453 (88%), Gaps = 1/453 (0%)
 Frame = -3

Query: 1357 MIVLHCYRNKLCLQRLVLTRLYSSSET-IKDTSDSTKGICKVMMSCPKSGLDTVLNQSGI 1181
            MI L  +R+K+  + +V T+++S+SE  I+D  ++++ +CKVMM+CP  GLDT LNQ+G+
Sbjct: 1    MIKLCSHRSKIFSKWVVFTKMHSASEAMIQDVGEASERVCKVMMTCPTLGLDTALNQTGV 60

Query: 1180 RVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDL 1001
            RVSPD+VE+VLKRFENAGM A++FFEWA KQR Y HSIRAYH MIESLAKIRQYQI+WDL
Sbjct: 61   RVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDL 120

Query: 1000 VNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKS 821
            V++MR  GMLNVETFCI++RKYAR  KV+EAVYTFNVM+KYDV PNLAAFNGLLSALCKS
Sbjct: 121  VSAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKS 180

Query: 820  KNVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYG 641
             NVRKAQEIFD MK +F+PD K+YSILLEGWGKAPNLP+ARE+FREMV+ GC PD+VTYG
Sbjct: 181  NNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYG 240

Query: 640  IMVDILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERN 461
            IMVD+LCKAGRVDEA+E+VK+MD   C+PTSFIYSVLVHTYG+E+RIEDA++TFL+M + 
Sbjct: 241  IMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKK 300

Query: 460  GIRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEA 281
            GI+ADV  YNALIGAFCKVNKFKNV RVL EM+  GV PNSRTCN+I++S+IG+ QTD A
Sbjct: 301  GIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRA 360

Query: 280  FRVFRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGL 101
            FRVF RMIK+CEPDADTYTMMIKMFCEK++L+MALK+WKYMK KQFVPSMHTFS LI GL
Sbjct: 361  FRVFCRMIKLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGL 420

Query: 100  CERGNVTKASVLLEEMIEKGIRPSGVTFGRLRQ 2
            CE+ N  KA V++EEMIEKGIRPS +TFGRLRQ
Sbjct: 421  CEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQ 453



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = -3

Query: 1063 AYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKVEEAVYTFNVM 887
            AY+ +I +  K+ +++ +  ++  M SNG+  N  T  +II       + + A   F  M
Sbjct: 308  AYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRM 367

Query: 886  EKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDR-FIPDSKTYSILLEGWGKAPNL 710
             K    P+   +  ++   C+   +  A +I+  MK + F+P   T+S L++G  +  N 
Sbjct: 368  IKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNA 426

Query: 709  PKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKP 554
             KA  +  EM++ G  P  +T+G +  +L K GR D    + + M+  V +P
Sbjct: 427  AKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLLVKEP 478


>ref|XP_007137466.1| hypothetical protein PHAVU_009G129200g [Phaseolus vulgaris]
            gi|593328080|ref|XP_007137467.1| hypothetical protein
            PHAVU_009G129200g [Phaseolus vulgaris]
            gi|561010553|gb|ESW09460.1| hypothetical protein
            PHAVU_009G129200g [Phaseolus vulgaris]
            gi|561010554|gb|ESW09461.1| hypothetical protein
            PHAVU_009G129200g [Phaseolus vulgaris]
          Length = 480

 Score =  703 bits (1815), Expect = 0.0
 Identities = 332/452 (73%), Positives = 397/452 (87%)
 Frame = -3

Query: 1357 MIVLHCYRNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIR 1178
            MI L  +R K+  + ++  +++S+SE I++  ++++ + KVMM+CP  GLDT LNQ+G+R
Sbjct: 1    MIKLCSHRKKILSEWVLFAKMHSTSEAIQEVGEASERVSKVMMTCPTLGLDTALNQTGVR 60

Query: 1177 VSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLV 998
            VSPD+VE+VLKRFENAGM A++FFEW+ KQR Y HSIRAYH MIESLAKIRQYQI+WDLV
Sbjct: 61   VSPDLVENVLKRFENAGMSAFRFFEWSEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLV 120

Query: 997  NSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSK 818
            N+MR  GMLNVETFCI++RKYAR  KV+EAVYTFNVM+KYDV PNLAAFNGLLSALCKS 
Sbjct: 121  NAMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSN 180

Query: 817  NVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGI 638
            NVRKAQEIFD MK RF+PD+KTYSILLEGWGKAPNLP+ARE+F EMV  GC PD+VTYGI
Sbjct: 181  NVRKAQEIFDAMKSRFVPDAKTYSILLEGWGKAPNLPRAREVFGEMVRAGCDPDVVTYGI 240

Query: 637  MVDILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNG 458
            MVD+LCKAGRVDEA+E+VK+MD   C+PTSFIYSVL+HTYG+E+RIEDA++TF +MER G
Sbjct: 241  MVDVLCKAGRVDEAVEVVKEMDESNCRPTSFIYSVLIHTYGVEHRIEDAIDTFQEMERKG 300

Query: 457  IRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAF 278
            I+ADV VYNALIGAFCKVNKFKNV RVL EM+  GV PNSRTCN+I++S+IG+ QTD AF
Sbjct: 301  IKADVVVYNALIGAFCKVNKFKNVHRVLQEMEINGVAPNSRTCNVIISSMIGQGQTDRAF 360

Query: 277  RVFRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLC 98
            RVFRRMIK+CEPDADTYTMMIKMFCEK+ ++MAL++WK+MK KQFVPSMHTFS L+ GLC
Sbjct: 361  RVFRRMIKLCEPDADTYTMMIKMFCEKNDVEMALRIWKFMKSKQFVPSMHTFSALVKGLC 420

Query: 97   ERGNVTKASVLLEEMIEKGIRPSGVTFGRLRQ 2
            E+G+  KA V+LEEMIEKGIRPS +TFGRLRQ
Sbjct: 421  EKGDAAKACVVLEEMIEKGIRPSRITFGRLRQ 452



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
 Frame = -3

Query: 1060 YHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKVEEAVYTFNVME 884
            Y+ +I +  K+ +++ +  ++  M  NG+  N  T  +II       + + A   F  M 
Sbjct: 308  YNALIGAFCKVNKFKNVHRVLQEMEINGVAPNSRTCNVIISSMIGQGQTDRAFRVFRRMI 367

Query: 883  KYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDR-FIPDSKTYSILLEGWGKAPNLP 707
            K    P+   +  ++   C+  +V  A  I+  MK + F+P   T+S L++G  +  +  
Sbjct: 368  KL-CEPDADTYTMMIKMFCEKNDVEMALRIWKFMKSKQFVPSMHTFSALVKGLCEKGDAA 426

Query: 706  KAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKP 554
            KA  +  EM++ G  P  +T+G +  +L K GR D    + + M+  V +P
Sbjct: 427  KACVVLEEMIEKGIRPSRITFGRLRQLLLKEGREDVLKFLHEKMNVLVKEP 477


>ref|XP_006434266.1| hypothetical protein CICLE_v10000990mg [Citrus clementina]
            gi|567883417|ref|XP_006434267.1| hypothetical protein
            CICLE_v10000990mg [Citrus clementina]
            gi|567883419|ref|XP_006434268.1| hypothetical protein
            CICLE_v10000990mg [Citrus clementina]
            gi|567883421|ref|XP_006434269.1| hypothetical protein
            CICLE_v10000990mg [Citrus clementina]
            gi|567883423|ref|XP_006434270.1| hypothetical protein
            CICLE_v10000990mg [Citrus clementina]
            gi|557536388|gb|ESR47506.1| hypothetical protein
            CICLE_v10000990mg [Citrus clementina]
            gi|557536389|gb|ESR47507.1| hypothetical protein
            CICLE_v10000990mg [Citrus clementina]
            gi|557536390|gb|ESR47508.1| hypothetical protein
            CICLE_v10000990mg [Citrus clementina]
            gi|557536391|gb|ESR47509.1| hypothetical protein
            CICLE_v10000990mg [Citrus clementina]
            gi|557536392|gb|ESR47510.1| hypothetical protein
            CICLE_v10000990mg [Citrus clementina]
          Length = 480

 Score =  703 bits (1815), Expect = 0.0
 Identities = 347/452 (76%), Positives = 397/452 (87%)
 Frame = -3

Query: 1357 MIVLHCYRNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIR 1178
            MI ++  RNK+    +   R Y+SSE   +  D+ K I K+M+S PK  LDT L+QSGIR
Sbjct: 1    MIKVYHSRNKMISGCISFLRRYNSSEPSTEALDAAKSISKIMLSSPKVVLDTALDQSGIR 60

Query: 1177 VSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLV 998
            VSP+IVEDVL++F+NAG LA+ FF+WA KQ+NY HS+RAYH+MIESLAKIRQYQIMWDLV
Sbjct: 61   VSPEIVEDVLEKFKNAGTLAFCFFKWAEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLV 120

Query: 997  NSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSK 818
            N+MR+  MLNVETFCII+RKYAR QKVEEAVYTFNVM+KY V  NLAAFNGLLSALCKSK
Sbjct: 121  NAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSK 180

Query: 817  NVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGI 638
            NVRKAQEIFD MKDRFIPDSKTYSILLEGWGK PNLP+AREIFREMVD GC+PDIVTYGI
Sbjct: 181  NVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGI 240

Query: 637  MVDILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNG 458
            MVD+LCKAGRVDEAL IVK MDS VC+PTSFIYSVLVHTYG+ENRIEDAV+TFL+ME+NG
Sbjct: 241  MVDVLCKAGRVDEALGIVKSMDSTVCQPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNG 300

Query: 457  IRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAF 278
            I+ADVA+YNALIGAFCK NKFKNV RVL +M+ KGV PNSRTCNIILN LIGR +TDEA+
Sbjct: 301  IQADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAY 360

Query: 277  RVFRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLC 98
            RVFRRMIK+CE DADTYTMMIKMFC+  +L+ A KVWKYMKLK+F+PSMHTFSVLINGLC
Sbjct: 361  RVFRRMIKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLC 420

Query: 97   ERGNVTKASVLLEEMIEKGIRPSGVTFGRLRQ 2
            ++G V+ + VLLE+MIEKGIRPSG TFG+LR+
Sbjct: 421  DKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452


>ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X1 [Citrus sinensis]
            gi|568837650|ref|XP_006472836.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X2 [Citrus sinensis]
            gi|568837652|ref|XP_006472837.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X3 [Citrus sinensis]
            gi|568837654|ref|XP_006472838.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X4 [Citrus sinensis]
          Length = 480

 Score =  701 bits (1809), Expect = 0.0
 Identities = 346/452 (76%), Positives = 395/452 (87%)
 Frame = -3

Query: 1357 MIVLHCYRNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIR 1178
            MI ++  RNK+    +   R Y+SSE   +  D+ K I K+M+S PK  LDT L+QSGIR
Sbjct: 1    MIKVYHSRNKMISGCISFLRRYNSSEPSTEALDAAKSISKIMLSSPKVVLDTALDQSGIR 60

Query: 1177 VSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLV 998
            VSP+IVEDVL++F+NAG LA+ FF+W  KQ+NY HS+RAYH+MIESLAKIRQYQIMWDLV
Sbjct: 61   VSPEIVEDVLEKFKNAGTLAFCFFKWTEKQQNYEHSVRAYHSMIESLAKIRQYQIMWDLV 120

Query: 997  NSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSK 818
            N+MR+  MLNVETFCII+RKYAR QKVEEAVYTFNVM+KY V  NLAAFNGLLSALCKSK
Sbjct: 121  NAMRTKRMLNVETFCIIMRKYARVQKVEEAVYTFNVMQKYGVTQNLAAFNGLLSALCKSK 180

Query: 817  NVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGI 638
            NVRKAQEIFD MKDRFIPDSKTYSILLEGWGK PNLP+AREIFREMVD GC+PDIVTYGI
Sbjct: 181  NVRKAQEIFDCMKDRFIPDSKTYSILLEGWGKDPNLPRAREIFREMVDTGCNPDIVTYGI 240

Query: 637  MVDILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNG 458
            MVD+LCKAGRVDEAL IVK MDS VC+PTSFIYSVLVHTYG+ENRIEDAV+TFL+ME+NG
Sbjct: 241  MVDVLCKAGRVDEALGIVKSMDSTVCRPTSFIYSVLVHTYGVENRIEDAVDTFLEMEKNG 300

Query: 457  IRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAF 278
            I ADVA+YNALIGAFCK NKFKNV RVL +M+ KGV PNSRTCNIILN LIGR +TDEA+
Sbjct: 301  ILADVAMYNALIGAFCKANKFKNVYRVLKDMNSKGVAPNSRTCNIILNGLIGRGETDEAY 360

Query: 277  RVFRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLC 98
            RVFRRMIK+CE DADTYTMMIKMFC+  +L+ A KVWKYMKLK+F+PSMHTFSVLINGLC
Sbjct: 361  RVFRRMIKLCEADADTYTMMIKMFCQGGELEKAFKVWKYMKLKRFIPSMHTFSVLINGLC 420

Query: 97   ERGNVTKASVLLEEMIEKGIRPSGVTFGRLRQ 2
            ++G V+ + VLLE+MIEKGIRPSG TFG+LR+
Sbjct: 421  DKGIVSDSCVLLEDMIEKGIRPSGETFGKLRK 452


>ref|XP_006340242.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Solanum tuberosum]
          Length = 478

 Score =  694 bits (1792), Expect = 0.0
 Identities = 327/450 (72%), Positives = 394/450 (87%)
 Frame = -3

Query: 1351 VLHCYRNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVS 1172
            +L  + +KLC + ++ TR+YSS ET++   D    +CK+MMSCPK+GLDT L+QSGIRV 
Sbjct: 1    MLRQFHHKLCDRTMIFTRMYSSKETMEVKLDPLTRLCKIMMSCPKAGLDTELDQSGIRVL 60

Query: 1171 PDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNS 992
            P++VEDVLKRFENAGMLAY+FFEWAGKQ NY HS RAYH+MI SLAKIRQYQ+MWDLVN 
Sbjct: 61   PEMVEDVLKRFENAGMLAYRFFEWAGKQHNYEHSTRAYHSMIGSLAKIRQYQMMWDLVNE 120

Query: 991  MRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNV 812
            M++  MLN+ETFCII+RKYAR QKVEE +YTF++M K+DVPPNLAAFNGLLSALCKSKNV
Sbjct: 121  MKTKRMLNIETFCIIMRKYARAQKVEETLYTFHIMNKFDVPPNLAAFNGLLSALCKSKNV 180

Query: 811  RKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMV 632
             KAQEIFD+ K+ F PDSKTYSIL+EGWG+APNLPKARE++REM++ GC+PDIVTYGIMV
Sbjct: 181  EKAQEIFDSKKNEFTPDSKTYSILIEGWGRAPNLPKAREVYREMIEAGCNPDIVTYGIMV 240

Query: 631  DILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIR 452
            DILCKAGRVDEA+EIVK+MD   C+PTSFIYSVLVHTYG+ENRIEDA++TFL+ME+NG+ 
Sbjct: 241  DILCKAGRVDEAVEIVKEMDFSGCRPTSFIYSVLVHTYGLENRIEDAIDTFLEMEKNGVE 300

Query: 451  ADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRV 272
            ADVAVYN+LI AFCKVNKF+NV  VL++M  KGV PN+RTCNIIL+ LI R +TD+AF+V
Sbjct: 301  ADVAVYNSLISAFCKVNKFQNVYMVLNDMQFKGVTPNARTCNIILSGLIARGETDDAFKV 360

Query: 271  FRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCER 92
            FRRM+K+C+PDADTYTMMIKMFCEK+++KMA KVWKYMK KQFVPSMHTFS L+NGLC+ 
Sbjct: 361  FRRMLKICDPDADTYTMMIKMFCEKNEMKMARKVWKYMKRKQFVPSMHTFSALVNGLCDD 420

Query: 91   GNVTKASVLLEEMIEKGIRPSGVTFGRLRQ 2
             +   A VL+EEMIEKG+RP  +TF +LR+
Sbjct: 421  ADAPGACVLMEEMIEKGMRPGRMTFEKLRK 450



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 55/297 (18%), Positives = 122/297 (41%), Gaps = 35/297 (11%)
 Frame = -3

Query: 1072 SIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFN 893
            ++ A++ ++ +L K +  +   ++ +S ++    + +T+ I+I  + R   + +A   + 
Sbjct: 163  NLAAFNGLLSALCKSKNVEKAQEIFDSKKNEFTPDSKTYSILIEGWGRAPNLPKAREVYR 222

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMK-DRFIPDSKTYSILLEGWGKAP 716
             M +    P++  +  ++  LCK+  V +A EI   M      P S  YS+L+  +G   
Sbjct: 223  EMIEAGCNPDIVTYGIMVDILCKAGRVDEAVEIVKEMDFSGCRPTSFIYSVLVHTYGLEN 282

Query: 715  NLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSR---------- 566
             +  A + F EM   G   D+  Y  ++   CK  +      ++ DM  +          
Sbjct: 283  RIEDAIDTFLEMEKNGVEADVAVYNSLISAFCKVNKFQNVYMVLNDMQFKGVTPNARTCN 342

Query: 565  ------------------------VCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNG 458
                                    +C P +  Y++++  +  +N ++ A + +  M+R  
Sbjct: 343  IILSGLIARGETDDAFKVFRRMLKICDPDADTYTMMIKMFCEKNEMKMARKVWKYMKRKQ 402

Query: 457  IRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTD 287
                +  ++AL+   C          +++EM +KG+ P   T   +   L+  E+ D
Sbjct: 403  FVPSMHTFSALVNGLCDDADAPGACVLMEEMIEKGMRPGRMTFEKLRKLLLKEERED 459



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 40/176 (22%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
 Frame = -3

Query: 1069 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKVEEAVYTFN 893
            +  Y+++I +  K+ ++Q ++ ++N M+  G+  N  T  II+       + ++A   F 
Sbjct: 303  VAVYNSLISAFCKVNKFQNVYMVLNDMQFKGVTPNARTCNIILSGLIARGETDDAFKVFR 362

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDR-FIPDSKTYSILLEGWGKAP 716
             M K    P+   +  ++   C+   ++ A++++  MK + F+P   T+S L+ G     
Sbjct: 363  RMLKI-CDPDADTYTMMIKMFCEKNEMKMARKVWKYMKRKQFVPSMHTFSALVNGLCDDA 421

Query: 715  NLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKPTS 548
            + P A  +  EM++ G  P  +T+  +  +L K  R D    + + ++  V +P S
Sbjct: 422  DAPGACVLMEEMIEKGMRPGRMTFEKLRKLLLKEEREDVLEFLQEKLNLMVREPLS 477


>gb|EYU18727.1| hypothetical protein MIMGU_mgv1a027101mg [Mimulus guttatus]
          Length = 497

 Score =  691 bits (1784), Expect = 0.0
 Identities = 327/430 (76%), Positives = 383/430 (89%)
 Frame = -3

Query: 1291 SSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQ 1112
            SS E ++D+++  K +CK+M SCPK GLDT L+QSGIRVS ++VE VL++FENAGMLA++
Sbjct: 40   SSGELVQDSTEIAKRVCKIMTSCPKLGLDTALDQSGIRVSEEVVEKVLEKFENAGMLAHR 99

Query: 1111 FFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYA 932
            FFEWA KQR Y HS+RAYH MIESLAKIRQY IMWDLVNSMRS GMLN+ETFC+I+RKYA
Sbjct: 100  FFEWAHKQRRYSHSVRAYHIMIESLAKIRQYDIMWDLVNSMRSKGMLNIETFCVIMRKYA 159

Query: 931  RTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFIPDSKT 752
            R QKV+EAVYTFNVM KYDV PNLAAFNGLLSAL KSKN+RKAQEIFD MK++F PDSKT
Sbjct: 160  RAQKVDEAVYTFNVMNKYDVQPNLAAFNGLLSALSKSKNIRKAQEIFDAMKNQFSPDSKT 219

Query: 751  YSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMD 572
            YSILLEGWG+APNLPKAREIF +MVD GC+PDIVTYGIMVDILCKAGR  EA+E++K+M+
Sbjct: 220  YSILLEGWGRAPNLPKAREIFTDMVDSGCNPDIVTYGIMVDILCKAGRTSEAVEVIKEME 279

Query: 571  SRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIRADVAVYNALIGAFCKVNKFK 392
               C+PTSFIYSVL+HTYGIENRIEDA++TFLQMERNG+ ADVAVYNALI AFCKVNKFK
Sbjct: 280  FSGCQPTSFIYSVLIHTYGIENRIEDAIDTFLQMERNGVIADVAVYNALISAFCKVNKFK 339

Query: 391  NVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRVFRRMIKVCEPDADTYTMMIK 212
            N  +V+DEM+ KGV PNSRTCNI++N LIGRE+TDEAF+VFRR+ K+CEPDADTYTMMIK
Sbjct: 340  NAYKVVDEMEKKGVSPNSRTCNILINGLIGREETDEAFKVFRRLSKICEPDADTYTMMIK 399

Query: 211  MFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCERGNVTKASVLLEEMIEKGIRP 32
            MFCE+D+++ ALKVWKYM+ KQF PSMHTFS LINGLC +G+ +KA VL+EEM+E+GIRP
Sbjct: 400  MFCERDEMETALKVWKYMERKQFAPSMHTFSALINGLCGKGDASKACVLMEEMMERGIRP 459

Query: 31   SGVTFGRLRQ 2
               TFG+LRQ
Sbjct: 460  GRHTFGKLRQ 469



 Score = 58.5 bits (140), Expect = 8e-06
 Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
 Frame = -3

Query: 1093 KQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKV 917
            ++   +  +  Y+ +I +  K+ +++  + +V+ M   G+  N  T  I+I      ++ 
Sbjct: 314  ERNGVIADVAVYNALISAFCKVNKFKNAYKVVDEMEKKGVSPNSRTCNILINGLIGREET 373

Query: 916  EEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNM-KDRFIPDSKTYSIL 740
            +EA   F  + K    P+   +  ++   C+   +  A +++  M + +F P   T+S L
Sbjct: 374  DEAFKVFRRLSKI-CEPDADTYTMMIKMFCERDEMETALKVWKYMERKQFAPSMHTFSAL 432

Query: 739  LEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVC 560
            + G     +  KA  +  EM++ G  P   T+G +  +L K GR D    + + M+  V 
Sbjct: 433  INGLCGKGDASKACVLMEEMMERGIRPGRHTFGKLRQLLLKEGREDVLGFLQEKMNLLVK 492

Query: 559  KP 554
            +P
Sbjct: 493  EP 494


>ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X1 [Glycine max]
          Length = 454

 Score =  691 bits (1782), Expect = 0.0
 Identities = 326/425 (76%), Positives = 380/425 (89%)
 Frame = -3

Query: 1276 IKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQFFEWA 1097
            I+D  ++++ +CKVMM+CP  GLDT LNQ+G+RVSPD+VE+VLKRFENAGM A++FFEWA
Sbjct: 2    IQDVGEASERVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWA 61

Query: 1096 GKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYARTQKV 917
             KQR Y HSIRAYH MIESLAKIRQYQI+WDLV++MR  GMLNVETFCI++RKYAR  KV
Sbjct: 62   EKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVETFCIMMRKYARANKV 121

Query: 916  EEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFIPDSKTYSILL 737
            +EAVYTFNVM+KYDV PNLAAFNGLLSALCKS NVRKAQEIFD MK +F+PD K+YSILL
Sbjct: 122  DEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILL 181

Query: 736  EGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCK 557
            EGWGKAPNLP+ARE+FREMV+ GC PD+VTYGIMVD+LCKAGRVDEA+E+VK+MD   C+
Sbjct: 182  EGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCR 241

Query: 556  PTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIRADVAVYNALIGAFCKVNKFKNVDRV 377
            PTSFIYSVLVHTYG+E+RIEDA++TFL+M + GI+ADV  YNALIGAFCKVNKFKNV RV
Sbjct: 242  PTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRV 301

Query: 376  LDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRVFRRMIKVCEPDADTYTMMIKMFCEK 197
            L EM+  GV PNSRTCN+I++S+IG+ QTD AFRVF RMIK+CEPDADTYTMMIKMFCEK
Sbjct: 302  LKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKLCEPDADTYTMMIKMFCEK 361

Query: 196  DKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCERGNVTKASVLLEEMIEKGIRPSGVTF 17
            ++L+MALK+WKYMK KQFVPSMHTFS LI GLCE+ N  KA V++EEMIEKGIRPS +TF
Sbjct: 362  NELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITF 421

Query: 16   GRLRQ 2
            GRLRQ
Sbjct: 422  GRLRQ 426



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = -3

Query: 1063 AYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKVEEAVYTFNVM 887
            AY+ +I +  K+ +++ +  ++  M SNG+  N  T  +II       + + A   F  M
Sbjct: 281  AYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRM 340

Query: 886  EKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDR-FIPDSKTYSILLEGWGKAPNL 710
             K    P+   +  ++   C+   +  A +I+  MK + F+P   T+S L++G  +  N 
Sbjct: 341  IKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNA 399

Query: 709  PKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKP 554
             KA  +  EM++ G  P  +T+G +  +L K GR D    + + M+  V +P
Sbjct: 400  AKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLLVKEP 451


>ref|XP_004502524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X1 [Cicer arietinum]
            gi|502135996|ref|XP_004502525.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X2 [Cicer arietinum]
            gi|502135999|ref|XP_004502526.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like isoform X3 [Cicer arietinum]
          Length = 480

 Score =  689 bits (1778), Expect = 0.0
 Identities = 332/452 (73%), Positives = 389/452 (86%)
 Frame = -3

Query: 1357 MIVLHCYRNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIR 1178
            MI +  +R  L L+ +   +  S+SE I D +D T+ + KVMMS P   LDT LNQ+G+R
Sbjct: 1    MIKISDHRKNLLLKCVSFAKTLSTSEPIHDIADVTETLYKVMMSNPAVTLDTALNQTGVR 60

Query: 1177 VSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLV 998
            VSP++VE VLKRFENAGM A++FFEWA KQRNY HS++AYH MIESLAKIRQYQIMWDLV
Sbjct: 61   VSPELVEIVLKRFENAGMSAFRFFEWAEKQRNYSHSVKAYHLMIESLAKIRQYQIMWDLV 120

Query: 997  NSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSK 818
            NSMR  GM+NVETFCII+RKYAR  KV+EAVYTFNVM+KYD P NLAAFNGLLSALCKS+
Sbjct: 121  NSMRKKGMVNVETFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSR 180

Query: 817  NVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGI 638
            NVRKAQEIFD+MK RF PDSKTYSILL GWGK PNLPKARE+F EMV  GC+PDIVTYGI
Sbjct: 181  NVRKAQEIFDSMKGRFEPDSKTYSILLAGWGKEPNLPKAREVFGEMVCAGCNPDIVTYGI 240

Query: 637  MVDILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNG 458
            MVDILCKAGRVDEA+E++KDMD+  C+PT+FIYSVLVHTYG+ENRIEDA++TF++MERNG
Sbjct: 241  MVDILCKAGRVDEAVEVLKDMDANNCRPTTFIYSVLVHTYGVENRIEDAIDTFMEMERNG 300

Query: 457  IRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAF 278
            + ADV VYNALI AFCK NK KNV RVL EM+ KG+ PNSRTCN+I+ SLI + +TD+AF
Sbjct: 301  VEADVVVYNALISAFCKANKIKNVHRVLKEMEKKGIAPNSRTCNVIMTSLITQGETDKAF 360

Query: 277  RVFRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLC 98
             VFRRMIK+CEPDADTYTM+IKMFCE+++ +MALK+W+YMK KQFVPS+HTFS LINGLC
Sbjct: 361  IVFRRMIKLCEPDADTYTMLIKMFCERNETEMALKIWRYMKSKQFVPSLHTFSALINGLC 420

Query: 97   ERGNVTKASVLLEEMIEKGIRPSGVTFGRLRQ 2
             +GNV KA +LLEEMIEKGIRPS +TFG+LRQ
Sbjct: 421  AKGNVVKACILLEEMIEKGIRPSRITFGKLRQ 452



 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 3/166 (1%)
 Frame = -3

Query: 1090 QRNYVHS-IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYARTQ-KV 917
            +RN V + +  Y+ +I +  K  + + +  ++  M   G+      C +I     TQ + 
Sbjct: 297  ERNGVEADVVVYNALISAFCKANKIKNVHRVLKEMEKKGIAPNSRTCNVIMTSLITQGET 356

Query: 916  EEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDR-FIPDSKTYSIL 740
            ++A   F  M K    P+   +  L+   C+      A +I+  MK + F+P   T+S L
Sbjct: 357  DKAFIVFRRMIKL-CEPDADTYTMLIKMFCERNETEMALKIWRYMKSKQFVPSLHTFSAL 415

Query: 739  LEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVD 602
            + G     N+ KA  +  EM++ G  P  +T+G +  +L K GR D
Sbjct: 416  INGLCAKGNVVKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRED 461


>ref|XP_004251179.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Solanum lycopersicum]
          Length = 478

 Score =  687 bits (1773), Expect = 0.0
 Identities = 324/450 (72%), Positives = 389/450 (86%)
 Frame = -3

Query: 1351 VLHCYRNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVS 1172
            +L  +  K+C + +  TR+YSS ET +   D    +CK+MMSCPK GLD  L+QSGIRV 
Sbjct: 1    MLRRFHQKVCGRTMNFTRMYSSKETTEVKLDPLTRLCKIMMSCPKVGLDIELDQSGIRVL 60

Query: 1171 PDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNS 992
            P++VEDVLKRFENAGMLAY+FFEWAGKQ NY HS RAYH+MI SLAKIRQYQ+MWDLVN 
Sbjct: 61   PEMVEDVLKRFENAGMLAYRFFEWAGKQHNYEHSTRAYHSMIGSLAKIRQYQMMWDLVNE 120

Query: 991  MRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNV 812
            M++  MLN+ETFCII+RKYAR QKVEE +YTF++M K+DVPPNLAAFNGLLSALCKSKNV
Sbjct: 121  MKTKRMLNIETFCIIMRKYARAQKVEETLYTFHIMNKFDVPPNLAAFNGLLSALCKSKNV 180

Query: 811  RKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMV 632
             KAQEIFD  K+ F PDSKTYSIL+EGWG+APNLPKARE++REM+++GC+PDIVTYGIMV
Sbjct: 181  EKAQEIFDTKKNEFTPDSKTYSILIEGWGRAPNLPKAREVYREMIEVGCNPDIVTYGIMV 240

Query: 631  DILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIR 452
            DILCKAGRVDEA+EIVK+MD   C+PTSFIYSVLVHTYG+ENRIEDA++TFL+ME+NG+ 
Sbjct: 241  DILCKAGRVDEAVEIVKEMDFSGCRPTSFIYSVLVHTYGLENRIEDAIDTFLEMEKNGVE 300

Query: 451  ADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRV 272
            ADVAVYN+LI AFCKVNKF+NV  VL++M  KGV PN+RTCNIIL+ LI R +TD+AF++
Sbjct: 301  ADVAVYNSLISAFCKVNKFQNVYMVLNDMQIKGVSPNARTCNIILSGLIARGETDDAFKI 360

Query: 271  FRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCER 92
            FRRM+K+C+PDADTYTMMIKMFCEK+++KMA KVWKYMK KQFVPSMHTFS L+NGLC+ 
Sbjct: 361  FRRMLKICDPDADTYTMMIKMFCEKNEMKMARKVWKYMKRKQFVPSMHTFSALVNGLCDD 420

Query: 91   GNVTKASVLLEEMIEKGIRPSGVTFGRLRQ 2
             +   A VL+EEMIEKG+RP  +TF +LR+
Sbjct: 421  ADAPGACVLMEEMIEKGMRPGRITFEKLRK 450



 Score = 76.3 bits (186), Expect = 4e-11
 Identities = 57/298 (19%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
 Frame = -3

Query: 1072 SIRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFN 893
            ++ A++ ++ +L K +  +   ++ ++ ++    + +T+ I+I  + R   + +A   + 
Sbjct: 163  NLAAFNGLLSALCKSKNVEKAQEIFDTKKNEFTPDSKTYSILIEGWGRAPNLPKAREVYR 222

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMK-DRFIPDSKTYSILLEGWGKAP 716
             M +    P++  +  ++  LCK+  V +A EI   M      P S  YS+L+  +G   
Sbjct: 223  EMIEVGCNPDIVTYGIMVDILCKAGRVDEAVEIVKEMDFSGCRPTSFIYSVLVHTYGLEN 282

Query: 715  NLPKAREIFREMVDMGCSPDIVTYGIMVDILCKA-------------------------- 614
             +  A + F EM   G   D+  Y  ++   CK                           
Sbjct: 283  RIEDAIDTFLEMEKNGVEADVAVYNSLISAFCKVNKFQNVYMVLNDMQIKGVSPNARTCN 342

Query: 613  ---------GRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERN 461
                     G  D+A +I + M  ++C P +  Y++++  +  +N ++ A + +  M+R 
Sbjct: 343  IILSGLIARGETDDAFKIFRRM-LKICDPDADTYTMMIKMFCEKNEMKMARKVWKYMKRK 401

Query: 460  GIRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTD 287
                 +  ++AL+   C          +++EM +KG+ P   T   +   L+  E+ D
Sbjct: 402  QFVPSMHTFSALVNGLCDDADAPGACVLMEEMIEKGMRPGRITFEKLRKLLLKEERED 459



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 40/176 (22%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
 Frame = -3

Query: 1069 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKVEEAVYTFN 893
            +  Y+++I +  K+ ++Q ++ ++N M+  G+  N  T  II+       + ++A   F 
Sbjct: 303  VAVYNSLISAFCKVNKFQNVYMVLNDMQIKGVSPNARTCNIILSGLIARGETDDAFKIFR 362

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDR-FIPDSKTYSILLEGWGKAP 716
             M K    P+   +  ++   C+   ++ A++++  MK + F+P   T+S L+ G     
Sbjct: 363  RMLKI-CDPDADTYTMMIKMFCEKNEMKMARKVWKYMKRKQFVPSMHTFSALVNGLCDDA 421

Query: 715  NLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKPTS 548
            + P A  +  EM++ G  P  +T+  +  +L K  R D    + + ++  V +P S
Sbjct: 422  DAPGACVLMEEMIEKGMRPGRITFEKLRKLLLKEEREDVLEFLQEKLNLMVREPLS 477


>ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Cucumis sativus]
            gi|449499065|ref|XP_004160711.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Cucumis sativus]
          Length = 439

 Score =  680 bits (1755), Expect = 0.0
 Identities = 326/410 (79%), Positives = 370/410 (90%)
 Frame = -3

Query: 1234 MMSCPKSGLDTVLNQSGIRVSPDIVEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYH 1055
            MM+C    L+T L+Q+GIR+SP+I E VL+RFENAGMLAY+FFEWA KQRNYVHS+RAYH
Sbjct: 1    MMTCHTLALETALDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYH 60

Query: 1054 TMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYD 875
            +MIESLAKIRQYQ++WDLVN+MR+  +LNVE FCII+RKYAR QKVEEAVYTFNVMEKY+
Sbjct: 61   SMIESLAKIRQYQMVWDLVNAMRNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYN 120

Query: 874  VPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKARE 695
            + PN+AAFNGLLSALCKSKNVRKAQEIFDNMKD+F+PDSKTYSIL+EGWG+APNLPKARE
Sbjct: 121  MKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKARE 180

Query: 694  IFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYG 515
            I+REM+D GC PD VTY IMVD+LCKAGRVDEA+EIVK+MD   CKP+SFIYSVLVHTYG
Sbjct: 181  IYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYG 240

Query: 514  IENRIEDAVETFLQMERNGIRADVAVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSR 335
            +ENRIEDAV TFL+MERNG+ ADVA YNALI AFCK NK KNV RVL +MD KGV PNSR
Sbjct: 241  VENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSR 300

Query: 334  TCNIILNSLIGREQTDEAFRVFRRMIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMK 155
            TCNII+NSLIGR +TDEAF++FRRMIKVCEPD D+YTM+IKMFC + +L MALK+WKYMK
Sbjct: 301  TCNIIINSLIGRGETDEAFKIFRRMIKVCEPDVDSYTMIIKMFCGRKELDMALKIWKYMK 360

Query: 154  LKQFVPSMHTFSVLINGLCERGNVTKASVLLEEMIEKGIRPSGVTFGRLR 5
             KQFVPSMHTFSVLINGLC+ GN T+A VLLEEMIEKGIRPSG TFGRLR
Sbjct: 361  KKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLR 410



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 3/182 (1%)
 Frame = -3

Query: 1090 QRNYVHS-IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGML-NVETFCIIIRKYARTQKV 917
            +RN V + + AY+ +I +  K  + + ++ ++  M   G+  N  T  III       + 
Sbjct: 256  ERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGET 315

Query: 916  EEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDR-FIPDSKTYSIL 740
            +EA   F  M K    P++ ++  ++   C  K +  A +I+  MK + F+P   T+S+L
Sbjct: 316  DEAFKIFRRMIKV-CEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVL 374

Query: 739  LEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVC 560
            + G  +  N  +A  +  EM++ G  P   T+G +  +L K GR D    + + M+  V 
Sbjct: 375  INGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRKDVLKFLQEKMNLLVK 434

Query: 559  KP 554
            +P
Sbjct: 435  EP 436


>gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  672 bits (1733), Expect = 0.0
 Identities = 321/445 (72%), Positives = 378/445 (84%)
 Frame = -3

Query: 1336 RNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVE 1157
            +++ C +  +  RLYSSSE ++D +D  K I KV+MS P+  LD+ L+QSG+RVS ++VE
Sbjct: 9    QSRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVE 68

Query: 1156 DVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNG 977
            DVL RF NAG+L Y+FF+W+ KQR+Y HS+RAYH MIES AKIRQY++MWDL+N+MR   
Sbjct: 69   DVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK 128

Query: 976  MLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQE 797
            MLNVETFCI++RKYAR QKV+EA+Y FNVMEKYD+PPNL AFNGLLSALCKSKNVRKAQE
Sbjct: 129  MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQE 188

Query: 796  IFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCK 617
            +F+NM+DRF PDSKTYSILLEGWGK PNLPKARE+FREM+D GC PDIVTY IMVDILCK
Sbjct: 189  VFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 248

Query: 616  AGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIRADVAV 437
            AGRVDEAL IV+ MD  +CKPT+FIYSVLVHTYG ENR+E+AV+TFL+MER+G++ADVAV
Sbjct: 249  AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 308

Query: 436  YNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRVFRRMI 257
            +N+LIGAFCK N+ KNV RVL EM  KGV PNS++CNIIL  LI R + DEAF VFR+MI
Sbjct: 309  FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 368

Query: 256  KVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCERGNVTK 77
            KVCEPDADTYTM+IKMFCEK +++ A KVWKYM+ K   PSMHTFSVLINGLCE     K
Sbjct: 369  KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQK 428

Query: 76   ASVLLEEMIEKGIRPSGVTFGRLRQ 2
            A VLLEEMIE GIRPSGVTFGRLRQ
Sbjct: 429  ACVLLEEMIEMGIRPSGVTFGRLRQ 453



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
 Frame = -3

Query: 1069 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFC-IIIRKYARTQKVEEAVYTFN 893
            +  ++++I +  K  + + ++ ++  M+S G+      C II+R      + +EA   F 
Sbjct: 306  VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFR 365

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 716
             M K    P+   +  ++   C+ K +  A +++  M+ + + P   T+S+L+ G  +  
Sbjct: 366  KMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEER 424

Query: 715  NLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKP 554
               KA  +  EM++MG  P  VT+G +  +L K  R D    + + M+  V +P
Sbjct: 425  TTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVLVNEP 478


>ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g77360, mitochondrial; Flags: Precursor
            gi|332197848|gb|AEE35969.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  672 bits (1733), Expect = 0.0
 Identities = 321/445 (72%), Positives = 378/445 (84%)
 Frame = -3

Query: 1336 RNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVE 1157
            +++ C +  +  RLYSSSE ++D +D  K I KV+MS P+  LD+ L+QSG+RVS ++VE
Sbjct: 45   QSRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVE 104

Query: 1156 DVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNG 977
            DVL RF NAG+L Y+FF+W+ KQR+Y HS+RAYH MIES AKIRQY++MWDL+N+MR   
Sbjct: 105  DVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK 164

Query: 976  MLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQE 797
            MLNVETFCI++RKYAR QKV+EA+Y FNVMEKYD+PPNL AFNGLLSALCKSKNVRKAQE
Sbjct: 165  MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQE 224

Query: 796  IFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCK 617
            +F+NM+DRF PDSKTYSILLEGWGK PNLPKARE+FREM+D GC PDIVTY IMVDILCK
Sbjct: 225  VFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284

Query: 616  AGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIRADVAV 437
            AGRVDEAL IV+ MD  +CKPT+FIYSVLVHTYG ENR+E+AV+TFL+MER+G++ADVAV
Sbjct: 285  AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344

Query: 436  YNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRVFRRMI 257
            +N+LIGAFCK N+ KNV RVL EM  KGV PNS++CNIIL  LI R + DEAF VFR+MI
Sbjct: 345  FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 404

Query: 256  KVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCERGNVTK 77
            KVCEPDADTYTM+IKMFCEK +++ A KVWKYM+ K   PSMHTFSVLINGLCE     K
Sbjct: 405  KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQK 464

Query: 76   ASVLLEEMIEKGIRPSGVTFGRLRQ 2
            A VLLEEMIE GIRPSGVTFGRLRQ
Sbjct: 465  ACVLLEEMIEMGIRPSGVTFGRLRQ 489



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
 Frame = -3

Query: 1069 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFC-IIIRKYARTQKVEEAVYTFN 893
            +  ++++I +  K  + + ++ ++  M+S G+      C II+R      + +EA   F 
Sbjct: 342  VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFR 401

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 716
             M K    P+   +  ++   C+ K +  A +++  M+ + + P   T+S+L+ G  +  
Sbjct: 402  KMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEER 460

Query: 715  NLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKP 554
               KA  +  EM++MG  P  VT+G +  +L K  R D    + + M+  V +P
Sbjct: 461  TTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVLVNEP 514


>ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297334980|gb|EFH65398.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 482

 Score =  671 bits (1730), Expect = 0.0
 Identities = 323/445 (72%), Positives = 378/445 (84%)
 Frame = -3

Query: 1336 RNKLCLQRLVLTRLYSSSETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDIVE 1157
            +++LC +  +  RLYSSSE ++D +D  K I KV+MS P+  +D+ L+QSG+RVSP++VE
Sbjct: 10   QSRLCSKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVIDSALDQSGLRVSPEVVE 69

Query: 1156 DVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRSNG 977
            DVL RF NAG+LAY+FF+W+ KQR+Y HS+RAYH MIES AKIRQY++MWDL+N+M    
Sbjct: 70   DVLYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKKK 129

Query: 976  MLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKAQE 797
            MLNVETFCI++RKYAR QKV+EA+Y FNVMEKYD+PPNL AFNGLLSALCKSKNVRKAQE
Sbjct: 130  MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQE 189

Query: 796  IFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDILCK 617
            IF+NM+DRF PDSKTYSILLEGWGK PNLPKARE+FREMVD G  PDIVTY IMVDILCK
Sbjct: 190  IFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCK 249

Query: 616  AGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIRADVAV 437
            AGRVDEAL IV+ MD  +CKPT+FIYSVLVHTYG E R+E+AV+TFL+MER+G++ADVAV
Sbjct: 250  AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAV 309

Query: 436  YNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRVFRRMI 257
            +N+LIGAFCK N+ KNV RVL EM  KGV PNS++CNIIL  LI R + DEAF VFR+MI
Sbjct: 310  FNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMI 369

Query: 256  KVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCERGNVTK 77
            KVCEPDADTYTMMIKMFCEK +++ A KVWKYM+ K   PSMHTFSVLINGLCE  N  K
Sbjct: 370  KVCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQK 429

Query: 76   ASVLLEEMIEKGIRPSGVTFGRLRQ 2
            A VLLEEMIE GIRPSG TFGRLRQ
Sbjct: 430  ACVLLEEMIEMGIRPSGATFGRLRQ 454



 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
 Frame = -3

Query: 1069 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFC-IIIRKYARTQKVEEAVYTFN 893
            +  ++++I +  K  + + ++ ++  M+S G+      C II+R      + +EA   F 
Sbjct: 307  VAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFR 366

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 716
             M K    P+   +  ++   C+ K +  A +++  M+ + + P   T+S+L+ G  + P
Sbjct: 367  KMIKV-CEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEP 425

Query: 715  NLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKP 554
            N  KA  +  EM++MG  P   T+G +  +L K  R D    + + M+  V +P
Sbjct: 426  NTQKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDREDVLKFLNEKMNVLVNEP 479


>ref|XP_006301167.1| hypothetical protein CARUB_v10021564mg, partial [Capsella rubella]
            gi|482569877|gb|EOA34065.1| hypothetical protein
            CARUB_v10021564mg, partial [Capsella rubella]
          Length = 486

 Score =  668 bits (1723), Expect = 0.0
 Identities = 322/447 (72%), Positives = 382/447 (85%), Gaps = 2/447 (0%)
 Frame = -3

Query: 1336 RNKLCLQRLVLTRLYSSS--ETIKDTSDSTKGICKVMMSCPKSGLDTVLNQSGIRVSPDI 1163
            +++L  + ++  +LYSSS  E  +D +D  K I KVMMS P+  LD+ L+QSG+RVS ++
Sbjct: 12   QSRLGCKSILSAKLYSSSSSEPARDVADVAKNISKVMMSSPQLVLDSALDQSGLRVSQEV 71

Query: 1162 VEDVLKRFENAGMLAYQFFEWAGKQRNYVHSIRAYHTMIESLAKIRQYQIMWDLVNSMRS 983
            VEDVL RF NAG+LAY+FF+W+ KQR+Y HS+RAYH MIES AKIRQY++MWDL+NSMR 
Sbjct: 72   VEDVLNRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINSMRK 131

Query: 982  NGMLNVETFCIIIRKYARTQKVEEAVYTFNVMEKYDVPPNLAAFNGLLSALCKSKNVRKA 803
              MLN+ETFCI++RKYAR QKV+EA+Y FNVMEKYD+PPNL AFNGLLSALCKSKNVRKA
Sbjct: 132  KKMLNIETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKA 191

Query: 802  QEIFDNMKDRFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCSPDIVTYGIMVDIL 623
            QEIF+NM+DRF P SKTYSILLEGWGK PNLPKARE+FREM+D GC PDIVTY IMVDIL
Sbjct: 192  QEIFENMRDRFTPSSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDIL 251

Query: 622  CKAGRVDEALEIVKDMDSRVCKPTSFIYSVLVHTYGIENRIEDAVETFLQMERNGIRADV 443
            CKAGRVDEAL IV+ MD  +CKPT+FIYSVLVHTYG ENR+E+AV+TFL+MER+G++ADV
Sbjct: 252  CKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADV 311

Query: 442  AVYNALIGAFCKVNKFKNVDRVLDEMDDKGVMPNSRTCNIILNSLIGREQTDEAFRVFRR 263
            A++N+LIGAFCK N+ KNV RVL EM +KGV PNS++CNIIL  LI R +TDEAF VFR+
Sbjct: 312  AIFNSLIGAFCKANRMKNVYRVLKEMKNKGVTPNSKSCNIILRHLIDRGETDEAFDVFRK 371

Query: 262  MIKVCEPDADTYTMMIKMFCEKDKLKMALKVWKYMKLKQFVPSMHTFSVLINGLCERGNV 83
            MIKVCEPDADTYTMMIKMFCEK +++ A KVWKYM+ K   PSMHTF+VLINGLC++ N 
Sbjct: 372  MIKVCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFAVLINGLCDQHNT 431

Query: 82   TKASVLLEEMIEKGIRPSGVTFGRLRQ 2
             KA VLLEEMIE GIRPSGVTFGRLRQ
Sbjct: 432  QKACVLLEEMIEMGIRPSGVTFGRLRQ 458



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
 Frame = -3

Query: 1069 IRAYHTMIESLAKIRQYQIMWDLVNSMRSNGMLNVETFC-IIIRKYARTQKVEEAVYTFN 893
            +  ++++I +  K  + + ++ ++  M++ G+      C II+R      + +EA   F 
Sbjct: 311  VAIFNSLIGAFCKANRMKNVYRVLKEMKNKGVTPNSKSCNIILRHLIDRGETDEAFDVFR 370

Query: 892  VMEKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDNMKDRFI-PDSKTYSILLEGWGKAP 716
             M K    P+   +  ++   C+ K +  A +++  M+ + + P   T+++L+ G     
Sbjct: 371  KMIKV-CEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFAVLINGLCDQH 429

Query: 715  NLPKAREIFREMVDMGCSPDIVTYGIMVDILCKAGRVDEALEIVKDMDSRVCKP 554
            N  KA  +  EM++MG  P  VT+G +  +L K  R D    + + M+  V +P
Sbjct: 430  NTQKACVLLEEMIEMGIRPSGVTFGRLRQLLLKEDREDVLKFLNEKMNVLVNEP 483