BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00027890
         (698 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   332   9e-89
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]   332   9e-89
ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containi...   315   9e-84
ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citr...   315   9e-84
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi...   308   1e-81
ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containi...   302   8e-80
ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, part...   298   1e-78
gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]     294   2e-77
ref|XP_002303975.2| pentatricopeptide repeat-containing family p...   283   5e-74
ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containi...   273   5e-71
ref|XP_002523384.1| pentatricopeptide repeat-containing protein,...   266   4e-69
ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily p...   265   8e-69
ref|XP_006280289.1| hypothetical protein CARUB_v10026213mg [Caps...   256   7e-66
ref|XP_002864446.1| pentatricopeptide repeat-containing protein ...   254   3e-65
ref|XP_006358733.1| PREDICTED: pentatricopeptide repeat-containi...   253   4e-65
ref|XP_006344590.1| PREDICTED: pentatricopeptide repeat-containi...   253   4e-65
ref|XP_007153011.1| hypothetical protein PHAVU_003G000200g [Phas...   253   4e-65
ref|XP_003589826.1| Pentatricopeptide repeat-containing protein ...   251   1e-64
ref|XP_004498089.1| PREDICTED: pentatricopeptide repeat-containi...   250   3e-64
ref|XP_004228988.1| PREDICTED: pentatricopeptide repeat-containi...   246   7e-63

>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score =  332 bits (850), Expect = 9e-89
 Identities = 163/232 (70%), Positives = 192/232 (82%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           DTYS+PF LKAVVRL  + VGR+IHCQ+IGTGL  D+ V+TALI+MYSSCGCV++AR+LF
Sbjct: 138 DTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLF 197

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAIT 362
           D    RDV  WNAMVAGYAKVGD+DNAR LFE MPERNVISWTA+IAGYAQ ++P++AIT
Sbjct: 198 DGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAIT 257

Query: 363 VFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYA 542
           +F+RM LE+VEPDEIAMLAALSACA LGAL+LG+WIHNYIDKHG   IVPL NALIDMYA
Sbjct: 258 MFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYA 317

Query: 543 KSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           K G I+KALEVF++M+H+SVITWT++I              MFS M+R RIK
Sbjct: 318 KCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIK 369



 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 43/132 (32%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
 Frame = +3

Query: 195 SRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQR 374
           S+ V L NA++  YAK G I+ A ++F+ M  ++VI+WT+MI G A      +A+ +F  
Sbjct: 303 SKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSC 362

Query: 375 MHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYI-DKHGFFGIVPLKNALIDMYAKSG 551
           M    ++P+EI  +A LSAC  +G +++G+W    +  K+G    +     +ID+  ++G
Sbjct: 363 MERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAG 422

Query: 552 NIKKALEVFESM 587
            +++A E+   M
Sbjct: 423 FLQEAQELVRGM 434


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score =  332 bits (850), Expect = 9e-89
 Identities = 163/232 (70%), Positives = 192/232 (82%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           DTYS+PF LKAVVRL  + VGR+IHCQ+IGTGL  D+ V+TALI+MYSSCGCV++AR+LF
Sbjct: 138 DTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLF 197

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAIT 362
           D    RDV  WNAMVAGYAKVGD+DNAR LFE MPERNVISWTA+IAGYAQ ++P++AIT
Sbjct: 198 DGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAIT 257

Query: 363 VFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYA 542
           +F+RM LE+VEPDEIAMLAALSACA LGAL+LG+WIHNYIDKHG   IVPL NALIDMYA
Sbjct: 258 MFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYA 317

Query: 543 KSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           K G I+KALEVF++M+H+SVITWT++I              MFS M+R RIK
Sbjct: 318 KCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIK 369



 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 43/132 (32%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
 Frame = +3

Query: 195 SRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQR 374
           S+ V L NA++  YAK G I+ A ++F+ M  ++VI+WT+MI G A      +A+ +F  
Sbjct: 303 SKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSC 362

Query: 375 MHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYI-DKHGFFGIVPLKNALIDMYAKSG 551
           M    ++P+EI  +A LSAC  +G +++G+W    +  K+G    +     +ID+  ++G
Sbjct: 363 MERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAG 422

Query: 552 NIKKALEVFESM 587
            +++A E+   M
Sbjct: 423 FLQEAQELVRGM 434


>ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like isoform X1 [Citrus sinensis]
           gi|568871598|ref|XP_006488969.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like isoform X2 [Citrus sinensis]
          Length = 564

 Score =  315 bits (807), Expect = 9e-84
 Identities = 153/234 (65%), Positives = 192/234 (82%), Gaps = 2/234 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           D YS PF LKAVV+LS +++GREIHCQ++GTGLD DV V+ ALI+MY+SC C+ DARK+F
Sbjct: 132 DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 191

Query: 183 DRTNSR--DVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKA 356
           D  + R  +V +WN MVAGYAKVGD++NAR LFELM E+NVISWT +IAGYAQ +QP++A
Sbjct: 192 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 251

Query: 357 ITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           IT+F+RM +E+V+PDEIAMLAALSACA LGA++LG+WIHNYI+++G   IVPL NALIDM
Sbjct: 252 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 311

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           YAKSG I KAL+VFE+MK++SVITWTT+I              MFSRM+RAR+K
Sbjct: 312 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 365



 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
 Frame = +3

Query: 204 VVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRMHL 383
           V L NA++  YAK G I  A  +FE M  ++VI+WT MIAG A      +A+ +F RM  
Sbjct: 302 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 361

Query: 384 EDVEPDEIAMLAALSACADLGALDLGQWIHNYI-DKHGFFGIVPLKNALIDMYAKSGNIK 560
             V+P+EI  +A LSAC  +G ++LG+   N +  ++G    +     +ID+  ++G ++
Sbjct: 362 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 421

Query: 561 KALEVFESM 587
           +A ++   M
Sbjct: 422 EAEKLLRRM 430


>ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citrus clementina]
           gi|557548156|gb|ESR58785.1| hypothetical protein
           CICLE_v10014960mg [Citrus clementina]
          Length = 510

 Score =  315 bits (807), Expect = 9e-84
 Identities = 153/234 (65%), Positives = 192/234 (82%), Gaps = 2/234 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           D YS PF LKAVV+LS +++GREIHCQ++GTGLD DV V+ ALI+MY+SC C+ DARK+F
Sbjct: 75  DNYSFPFVLKAVVKLSTIELGREIHCQTVGTGLDSDVHVVAALIQMYASCKCIYDARKVF 134

Query: 183 DRTNSR--DVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKA 356
           D  + R  +V +WN MVAGYAKVGD++NAR LFELM E+NVISWT +IAGYAQ +QP++A
Sbjct: 135 DELSLRVWNVAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEA 194

Query: 357 ITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           IT+F+RM +E+V+PDEIAMLAALSACA LGA++LG+WIHNYI+++G   IVPL NALIDM
Sbjct: 195 ITLFRRMQVENVKPDEIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDM 254

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           YAKSG I KAL+VFE+MK++SVITWTT+I              MFSRM+RAR+K
Sbjct: 255 YAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVK 308



 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
 Frame = +3

Query: 204 VVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRMHL 383
           V L NA++  YAK G I  A  +FE M  ++VI+WT MIAG A      +A+ +F RM  
Sbjct: 245 VPLNNALIDMYAKSGKIGKALQVFENMKNKSVITWTTMIAGLALHGLGREALDMFSRMER 304

Query: 384 EDVEPDEIAMLAALSACADLGALDLGQWIHNYI-DKHGFFGIVPLKNALIDMYAKSGNIK 560
             V+P+EI  +A LSAC  +G ++LG+   N +  ++G    +     +ID+  ++G ++
Sbjct: 305 ARVKPNEITFIAILSACCHVGLVELGRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQ 364

Query: 561 KALEVFESM 587
           +A ++   M
Sbjct: 365 EAEKLLRRM 373


>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
           gi|449493602|ref|XP_004159370.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 548

 Score =  308 bits (788), Expect = 1e-81
 Identities = 149/232 (64%), Positives = 187/232 (80%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           D+YSIP  LKAVV+LS V+VGR+IH Q++ + LD+DV V T+LI+MYSSCG V+DARKLF
Sbjct: 121 DSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLF 180

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAIT 362
           D    +DV LWNAMVAGY KVG++ +AR +F  MP+RNVISWT +IAGYAQTN+P +AI 
Sbjct: 181 DFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 363 VFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYA 542
           +F++M LE+VEPDEIAMLA LSACADLGAL+LG+WIHNYI+KHG   IV L NALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYA 300

Query: 543 KSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           KSGNI++ALEVFE+MK +SVITW+T+I              MF RM++A+++
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVR 352



 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 47/147 (31%), Positives = 86/147 (58%), Gaps = 5/147 (3%)
 Frame = +3

Query: 198 RDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRM 377
           R V L+NA++  YAK G+I  A ++FE M +++VI+W+ +IA  A      +AI +F RM
Sbjct: 287 RIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRM 346

Query: 378 HLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDK-HGFFGIVPL---KNALIDMYAK 545
               V P+E+  +A LSAC+ +G +D+G++   Y D+    + I P       +ID+ A+
Sbjct: 347 EKAKVRPNEVTFVAILSACSHVGMVDVGRY---YFDQMQSMYKIEPKIEHYGCMIDLLAR 403

Query: 546 SGNIKKALEVFESMK-HRSVITWTTII 623
           +G +++A ++   M    + + W +++
Sbjct: 404 AGYLQEAQKLLHDMPFEANAMIWGSLL 430


>ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Fragaria vesca subsp. vesca]
          Length = 518

 Score =  302 bits (773), Expect = 8e-80
 Identities = 151/233 (64%), Positives = 179/233 (76%), Gaps = 2/233 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           DTYS+P  LKAVVRL  V +GR++HC SI TGLD  V V+TALI MYSSCG V DAR+LF
Sbjct: 89  DTYSVPLVLKAVVRLGAVGIGRQVHCHSIVTGLDTHVSVVTALIHMYSSCGSVFDARRLF 148

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMP--ERNVISWTAMIAGYAQTNQPSKA 356
           D    RDV LWNAM+AGYAK+G +D+AR +FE MP    NVISWTA+IAGYAQ N+P++A
Sbjct: 149 DGAAFRDVALWNAMIAGYAKLGHVDSARHVFETMPLNNSNVISWTALIAGYAQVNRPTEA 208

Query: 357 ITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           I VF+RM L +V+PDEIAMLAALSACA LGAL LG+WIHNYI KHGF  +  L NALIDM
Sbjct: 209 IMVFRRMQLHNVQPDEIAMLAALSACAQLGALRLGEWIHNYIQKHGFRELSSLNNALIDM 268

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARI 695
           YAKSGNI+KAL+VF S  H++VITWTT+I              MFS+M+RA+I
Sbjct: 269 YAKSGNIRKALQVFHSTNHKTVITWTTMIAGLALHGLGTQALDMFSQMERAQI 321



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
 Frame = +3

Query: 216 NAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRMHLEDVE 395
           NA++  YAK G+I  A  +F     + VI+WT MIAG A     ++A+ +F +M    + 
Sbjct: 263 NALIDMYAKSGNIRKALQVFHSTNHKTVITWTTMIAGLALHGLGTQALDMFSQMERAQIA 322

Query: 396 PDEIAMLAALSACADLGALDLG-QWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALE 572
           P+ I  +A LSAC+    +  G ++    + ++     +     ++D+  ++G +++A +
Sbjct: 323 PNHITFIAILSACSHAHLVQTGLRYFDIMVSRYRIQPKIMHYGCMVDLLGRAGYLQEAQQ 382

Query: 573 VFESM 587
           +   M
Sbjct: 383 LVRQM 387


>ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, partial [Prunus persica]
           gi|462403882|gb|EMJ09439.1| hypothetical protein
           PRUPE_ppa016950mg, partial [Prunus persica]
          Length = 532

 Score =  298 bits (763), Expect = 1e-78
 Identities = 154/243 (63%), Positives = 184/243 (75%), Gaps = 11/243 (4%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKV----GREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDA 170
           DTYS PF LKAVVRL+  +V    G +IHC  IG G D+D  V+TALI MYSSCGCV+DA
Sbjct: 94  DTYSFPFVLKAVVRLAPPQVQRLVGAQIHCHIIGIGFDMDASVLTALIHMYSSCGCVSDA 153

Query: 171 RKLFDRTNS-----RDVVLWNAMVAGYAKVGDIDNARDLFELMPER--NVISWTAMIAGY 329
           R LFD   +     RDV LWNAM+AGYAK GD+DNAR LFELMP R  NVISWTA+IAGY
Sbjct: 154 RTLFDGAAAFAFAFRDVALWNAMIAGYAKSGDVDNARHLFELMPPRIRNVISWTALIAGY 213

Query: 330 AQTNQPSKAITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIV 509
           AQ ++P +AITVF+RM LE+V+PDEI+MLAALSACA LGAL LG+WIHNYI+KH F  +V
Sbjct: 214 AQVDRPHEAITVFRRMQLENVQPDEISMLAALSACAHLGALHLGEWIHNYIEKHEFRKLV 273

Query: 510 PLKNALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRA 689
            L NALIDMYAKSGNI KAL+VFE+ K ++V+TWTT+I              MF++M+R 
Sbjct: 274 SLNNALIDMYAKSGNITKALQVFENTKCKTVVTWTTMIAGLALHGLGREALEMFAQMERV 333

Query: 690 RIK 698
           +IK
Sbjct: 334 KIK 336



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
 Frame = +3

Query: 204 VVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRMHL 383
           V L NA++  YAK G+I  A  +FE    + V++WT MIAG A      +A+ +F +M  
Sbjct: 273 VSLNNALIDMYAKSGNITKALQVFENTKCKTVVTWTTMIAGLALHGLGREALEMFAQMER 332

Query: 384 EDVEPDEIAMLAALSACADLGALDLGQWIHN-YIDKHGFFGIVPLKNALIDMYAKSGNIK 560
             ++P++I  +A LSAC+    +++G W  +  + K+     +     +ID+ A++G ++
Sbjct: 333 VKIKPNDITFIAILSACSHGRLVEIGHWYFSIMVSKYRIKPKIVHYGCMIDLLARAGYLQ 392

Query: 561 KALEVFESM 587
           +A E+   M
Sbjct: 393 EAHELVRQM 401


>gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]
          Length = 524

 Score =  294 bits (753), Expect = 2e-77
 Identities = 143/232 (61%), Positives = 179/232 (77%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           DTY+ PF LKAV++LS V+VGR+IHCQ++ TGLD DV  +TAL+RMYS CG + D+R++F
Sbjct: 97  DTYTFPFVLKAVIKLSAVEVGRQIHCQALRTGLDSDVNAVTALVRMYSCCGSILDSRRMF 156

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAIT 362
           D  +  DV LWNAMVAGYAK GD+DNAR +FE MPERN+ISWT++IAGYAQ  +P +AI 
Sbjct: 157 DEMSFWDVALWNAMVAGYAKAGDVDNARKVFEQMPERNLISWTSVIAGYAQMKRPEEAIL 216

Query: 363 VFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYA 542
           +F+RM LE+VEPDE+A+LA LSACA LG+L LG+ IHNYI K GF   + L NALIDMY 
Sbjct: 217 LFKRMLLENVEPDEVAILALLSACAHLGSLRLGERIHNYIQKRGFSRKLRLNNALIDMYV 276

Query: 543 KSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           KSG+I+KAL VFESMK RSV+TWTT++              MFSRM+ A +K
Sbjct: 277 KSGSIRKALNVFESMKERSVVTWTTMLAGLALHGLGREASVMFSRMESAVVK 328



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 46/136 (33%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
 Frame = +3

Query: 195 SRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQR 374
           SR + L NA++  Y K G I  A ++FE M ER+V++WT M+AG A      +A  +F R
Sbjct: 262 SRKLRLNNALIDMYVKSGSIRKALNVFESMKERSVVTWTTMLAGLALHGLGREASVMFSR 321

Query: 375 MHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYID-KHGFFGIVPLKNALIDMYAKSG 551
           M    V+P++I  +A LSAC   G +++G+W  N +D ++G    +     +ID+  + G
Sbjct: 322 MESAVVKPNDITFIAVLSACRHAGLVEMGRWYFNNMDSRYGIQPKIEHYGCMIDLLGRGG 381

Query: 552 NIKKALEVFESMKHRS 599
            +++A E+ ++M  ++
Sbjct: 382 YLQEAWELVKAMPFKA 397


>ref|XP_002303975.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550343649|gb|EEE78954.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 543

 Score =  283 bits (723), Expect = 5e-74
 Identities = 143/237 (60%), Positives = 179/237 (75%), Gaps = 5/237 (2%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSS--CGCVTDARK 176
           D+YS PFALKAV R S ++ GR++H QSI  GL  D+ V+TA ++MYSS   GC+ DARK
Sbjct: 112 DSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSGCICDARK 171

Query: 177 LFD--RTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPS 350
           +FD    ++ DV LWNAM+ GYAK GD+ NARDLFE MP+RNVISWTA+I GYAQ N+P 
Sbjct: 172 MFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRPH 231

Query: 351 KAITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGI-VPLKNAL 527
            AI +F+RM LE+VEPDEIAML AL+ACA LGAL+LG+WI +YID+ G     +PL NAL
Sbjct: 232 DAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNNAL 291

Query: 528 IDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           IDMYAKSG+IK AL+VFE+M H+++ITWTT+I              MFSRM+RAR+K
Sbjct: 292 IDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVK 348



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 46/143 (32%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
 Frame = +3

Query: 201 DVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRMH 380
           ++ L NA++  YAK GDI +A  +FE M  + +I+WT MIAG A     ++A+ +F RM 
Sbjct: 284 NIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRME 343

Query: 381 LEDVEPDEIAMLAALSACADLGALDLGQWIHN-YIDKHGFFGIVPLKNALIDMYAKSGNI 557
              V+P++I  +A LSAC+ +G +  G+W  N  I ++G    +     +ID+  ++G++
Sbjct: 344 RARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHL 403

Query: 558 KKALEVFESMKHR-SVITWTTII 623
           K+A  +   M    + + W +++
Sbjct: 404 KEAQTLLAQMPFEPNAVIWGSLL 426


>ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Glycine max]
          Length = 580

 Score =  273 bits (697), Expect = 5e-71
 Identities = 135/236 (57%), Positives = 180/236 (76%), Gaps = 4/236 (1%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           D+YS PF LKAVV LS V VG++IHCQ+I +GLD    V+T+L++MYSSC  ++ ARKLF
Sbjct: 157 DSYSFPFVLKAVVCLSAVHVGKQIHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLF 216

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPE--RNVISWTAMIAGYAQTNQPSKA 356
           D    +   LWNAM+AGYAKVG++ NAR+LFE MPE  R+V+SWT +I+GY QT+ P++A
Sbjct: 217 DGATFKHAPLWNAMLAGYAKVGNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEA 276

Query: 357 ITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHG--FFGIVPLKNALI 530
           IT+F+ M L++V+PDEIA+LA LSACADLGAL LG+WIHNYI+KH       VPL N+LI
Sbjct: 277 ITLFRIMLLQNVQPDEIAILAVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLI 336

Query: 531 DMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           DMYAKSG+I KA ++F++MKH+++ITWTT+I              +FS M++AR+K
Sbjct: 337 DMYAKSGDISKARQLFQNMKHKTIITWTTVISGLALHGFGKEALDVFSCMEKARVK 392



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 45/144 (31%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
 Frame = +3

Query: 198 RDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRM 377
           + V L N+++  YAK GDI  AR LF+ M  + +I+WT +I+G A      +A+ VF  M
Sbjct: 327 KTVPLCNSLIDMYAKSGDISKARQLFQNMKHKTIITWTTVISGLALHGFGKEALDVFSCM 386

Query: 378 HLEDVEPDEIAMLAALSACADLGALDLGQWIHNYI-DKHGFFGIVPLKNALIDMYAKSGN 554
               V+P+E+ ++A LSAC+ +G ++LG+ I   +  K+G    +     +ID+  ++G 
Sbjct: 387 EKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAGY 446

Query: 555 IKKALEVFESM-KHRSVITWTTII 623
           +++A+E+   M    +   W +++
Sbjct: 447 LQEAMELVRVMPSEANAAVWGSLL 470


>ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537334|gb|EEF38963.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 538

 Score =  266 bits (681), Expect = 4e-69
 Identities = 134/234 (57%), Positives = 172/234 (73%), Gaps = 2/234 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           D+YS PFALKAV+RLS  K G + H Q+I  GL   + V+ +LIRMYSS   ++DARKLF
Sbjct: 109 DSYSFPFALKAVIRLSATKTGLQFHSQAIRFGLHSHLHVLVSLIRMYSSSH-ISDARKLF 167

Query: 183 DRT--NSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKA 356
           D     +R+V LWNAM+  YAK+ D+ NA+ LF+ MP+RN+ISWTA+I+GYA  N+P +A
Sbjct: 168 DGIPLTARNVALWNAMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQA 227

Query: 357 ITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           I +F+ M L++V PDEI +LA LSACA LGAL+LG+WI NYID HG    VPL NALIDM
Sbjct: 228 IAIFRTMQLQNVVPDEITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDM 287

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           YAKSGNIK+AL +FESMKH++++TWTT+I              MFSRM+R R+K
Sbjct: 288 YAKSGNIKRALLIFESMKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVK 341



 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 42/131 (32%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
 Frame = +3

Query: 198 RDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRM 377
           R+V L NA++  YAK G+I  A  +FE M  + +++WT MIAG A     ++A+ +F RM
Sbjct: 276 RNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWTTMIAGLALHGLGTQALEMFSRM 335

Query: 378 HLEDVEPDEIAMLAALSACADLGALDLGQ-WIHNYIDKHGFFGIVPLKNALIDMYAKSGN 554
             + V+P+EI  +A LSAC+ +G + L + +  N   ++     +     +ID+  ++G 
Sbjct: 336 ERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGY 395

Query: 555 IKKALEVFESM 587
           +++A ++ + M
Sbjct: 396 LQEAQQLLQQM 406


>ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590582550|ref|XP_007014655.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508785017|gb|EOY32273.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508785018|gb|EOY32274.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 540

 Score =  265 bits (678), Expect = 8e-69
 Identities = 138/245 (56%), Positives = 179/245 (73%), Gaps = 13/245 (5%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           D+YS PFALKAVV L  ++ G +IH Q++  GL+ ++ V TALI+MYSSC CV+DARKLF
Sbjct: 100 DSYSFPFALKAVVDLQALRFGTQIHSQTVCAGLNANIYVATALIQMYSSCACVSDARKLF 159

Query: 183 DRTNS-----RDVVLWNAMVAGYAKVGDIDNARDLFELMPERN------VISWTAMIAGY 329
           D+  S     +DV LW+A +AGYAKVGD D A DL E MP+        ++ WT +IAGY
Sbjct: 160 DQLTSVSRSIQDVALWSATIAGYAKVGDPDAAWDLLERMPQTQTNAEAVMVCWTTVIAGY 219

Query: 330 AQTNQPSKAITVFQRMHLEDVEPDEIAMLAALSACADLGALD--LGQWIHNYIDKHGFFG 503
           AQ ++P++AI VF+RM LE+V+PDEIAMLA L+ACA LGA+   LG+ IH YI KHGF  
Sbjct: 220 AQMDRPNEAIAVFRRMQLENVKPDEIAMLAVLTACAHLGAIQFLLGECIHGYIHKHGFNQ 279

Query: 504 IVPLKNALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMD 683
           ++PLKNALI+MYAKSG+I KAL+VFE+M H++VITWTTII              MFSRM+
Sbjct: 280 MIPLKNALIEMYAKSGDICKALQVFENMNHKTVITWTTIISALAFHGLGTLALQMFSRME 339

Query: 684 RARIK 698
           RA+++
Sbjct: 340 RAQVQ 344



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 46/142 (32%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
 Frame = +3

Query: 204 VVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRMHL 383
           + L NA++  YAK GDI  A  +FE M  + VI+WT +I+  A     + A+ +F RM  
Sbjct: 281 IPLKNALIEMYAKSGDICKALQVFENMNHKTVITWTTIISALAFHGLGTLALQMFSRMER 340

Query: 384 EDVEPDEIAMLAALSACADLGALDLGQWIHNYI-DKHGFFGIVPLKNALIDMYAKSGNIK 560
             V+P++I  LA LSAC   G +DLG    N +  ++G    +     +ID+  ++G ++
Sbjct: 341 AQVQPNDITFLAVLSACTHAGLVDLGGCFFNTMSSRYGIQPKIQHYGCMIDLLGRAGYLR 400

Query: 561 KALEVFESMKHR-SVITWTTII 623
           +ALE+   M  + +   W +++
Sbjct: 401 EALELVSRMPFKPNAAIWGSLL 422


>ref|XP_006280289.1| hypothetical protein CARUB_v10026213mg [Capsella rubella]
           gi|482548993|gb|EOA13187.1| hypothetical protein
           CARUB_v10026213mg [Capsella rubella]
          Length = 532

 Score =  256 bits (653), Expect = 7e-66
 Identities = 130/234 (55%), Positives = 171/234 (73%), Gaps = 2/234 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           DT++ PF LK  VR+S V  GR+IH Q++  GLD  V V+T +I+MYSSCG + DARK+F
Sbjct: 116 DTFTFPFVLKIAVRVSDVCFGRQIHGQTVVFGLDSSVHVVTGIIQMYSSCGGLGDARKVF 175

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMP--ERNVISWTAMIAGYAQTNQPSKA 356
           D T  RDV +WNA++AGY KVG++D AR L ++MP   RNV+SWT +I+GYA++ +PS+A
Sbjct: 176 DETRVRDVNVWNALLAGYGKVGEMDEARVLLDMMPCWIRNVVSWTCVISGYAKSRRPSEA 235

Query: 357 ITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           I VFQRM +E+VEPDE+ +LAALSACADL +L+LG+ I +Y+D  G    V L NA+IDM
Sbjct: 236 IEVFQRMLMENVEPDEVTLLAALSACADLVSLELGERICSYVDHRGMERAVSLNNAVIDM 295

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           YAKSGNI KALEVFE +  R+V+TWTTII              MF+RM +A +K
Sbjct: 296 YAKSGNITKALEVFERVNERNVVTWTTIITGLATHGHGTEALAMFNRMVKAGVK 349



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 47/135 (34%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
 Frame = +3

Query: 186 RTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITV 365
           R   R V L NA++  YAK G+I  A ++FE + ERNV++WT +I G A     ++A+ +
Sbjct: 280 RGMERAVSLNNAVIDMYAKSGNITKALEVFERVNERNVVTWTTIITGLATHGHGTEALAM 339

Query: 366 FQRMHLEDVEPDEIAMLAALSACADLGALDLGQWI-HNYIDKHGFFGIVPLKNALIDMYA 542
           F RM    V+P+++  +A LSAC+ +G + LG+ +  + I K+G    +     +ID+  
Sbjct: 340 FNRMVKAGVKPNDVTFIAILSACSHVGWVYLGKRLFSSMISKYGMQPNIEHYGCMIDLLG 399

Query: 543 KSGNIKKALEVFESM 587
           ++G +++A E  +SM
Sbjct: 400 RAGLLREAEEAIKSM 414


>ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310281|gb|EFH40705.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 531

 Score =  254 bits (648), Expect = 3e-65
 Identities = 128/234 (54%), Positives = 168/234 (71%), Gaps = 2/234 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           DT++ PF LK VVR+S V  GR++H Q++  G D  V V+T LI+MYSSCG + DARK+F
Sbjct: 115 DTFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVF 174

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMP--ERNVISWTAMIAGYAQTNQPSKA 356
           D    RDV +WNA++AGY KVG++D AR L E+MP   RN +SWT +I+GYA++ + S+A
Sbjct: 175 DEMRVRDVNVWNALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEA 234

Query: 357 ITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           I VFQRM +E+V+PDE+ +LA LSACADLG+L+LG+ I +Y+D  G    V L NA+IDM
Sbjct: 235 IEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDM 294

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           YAKSGNI KALEVFES+  R+V+TWTTII              MF RM +A +K
Sbjct: 295 YAKSGNITKALEVFESVNERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVK 348



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 5/196 (2%)
 Frame = +3

Query: 27  LKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLFD----RTN 194
           +    R  R     E+  + +   +D D   + A++   +  G +    ++      R  
Sbjct: 222 ISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGM 281

Query: 195 SRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQR 374
           +R V L NA++  YAK G+I  A ++FE + ERNV++WT +I G A     ++A+ +F R
Sbjct: 282 NRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLATHGHGAEALVMFDR 341

Query: 375 MHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYI-DKHGFFGIVPLKNALIDMYAKSG 551
           M    V+P+++  +A LSAC+ +G +DLG    N +  K+G    +     +ID+  ++G
Sbjct: 342 MVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAG 401

Query: 552 NIKKALEVFESMKHRS 599
            +++A EV +SM   S
Sbjct: 402 KLREAEEVIKSMPFES 417


>ref|XP_006358733.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like isoform X1 [Solanum tuberosum]
           gi|565385767|ref|XP_006358734.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like isoform X2 [Solanum tuberosum]
          Length = 508

 Score =  253 bits (646), Expect = 4e-65
 Identities = 130/234 (55%), Positives = 168/234 (71%), Gaps = 2/234 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           DTYSIPF L AV  L+     R+IHC++I TGL+ DV V T+L+RMYSS GC++DARK+F
Sbjct: 76  DTYSIPFVLNAVTCLT---TSRQIHCEAILTGLNNDVHVATSLVRMYSSFGCISDARKVF 132

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAIT 362
           D   ++DV LWNAM+AGY K  D+D A+ LF+ M E+NV+SWT +IAGYAQ NQ S+AI 
Sbjct: 133 DEMRNKDVGLWNAMIAGYVKAHDMDTAKYLFDNMLEKNVVSWTTIIAGYAQGNQFSQAIG 192

Query: 363 VFQRMHLEDV--EPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           VF++M   +V  +PDE+ MLAALSACA LG  +LG+WIH+YI KH     V L N LIDM
Sbjct: 193 VFRKMMSVEVSAKPDEVTMLAALSACAHLGEHELGEWIHSYIIKHRLHRSVSLNNTLIDM 252

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           YAKSGN+KKA+E+FESM+ RSV+TW+T+I              MF R++   I+
Sbjct: 253 YAKSGNVKKAVELFESMETRSVVTWSTVISALAVNGYGREAINMFPRLEMVGIR 306



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 37/131 (28%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
 Frame = +3

Query: 198 RDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRM 377
           R V L N ++  YAK G++  A +LFE M  R+V++W+ +I+  A      +AI +F R+
Sbjct: 241 RSVSLNNTLIDMYAKSGNVKKAVELFESMETRSVVTWSTVISALAVNGYGREAINMFPRL 300

Query: 378 HLEDVEPDEIAMLAALSACADLGALDLGQ-WIHNYIDKHGFFGIVPLKNALIDMYAKSGN 554
            +  + P+ +  +A LSAC+  G ++ G+ +     +KHG    +     ++D++ ++G 
Sbjct: 301 EMVGIRPNSVTFIALLSACSHAGLVEEGRLYFKTMEEKHGISPDIRHYGCMVDLFGRAGY 360

Query: 555 IKKALEVFESM 587
           + +A  + + M
Sbjct: 361 LDEAANMVKMM 371


>ref|XP_006344590.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like isoform X1 [Solanum tuberosum]
           gi|565355429|ref|XP_006344591.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like isoform X2 [Solanum tuberosum]
          Length = 508

 Score =  253 bits (646), Expect = 4e-65
 Identities = 131/234 (55%), Positives = 167/234 (71%), Gaps = 2/234 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           DTYSIPF L A  RL      R+IHC++I TGL+ DV V T+L+RMYSS GC++DARK+F
Sbjct: 76  DTYSIPFVLNAETRLI---TSRQIHCEAILTGLNNDVHVATSLVRMYSSFGCISDARKVF 132

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAIT 362
           D   ++DV  WNAM+ GY K  D+D A+ LF+ M E+NV+SWTA+IAGYAQ NQ S+AI 
Sbjct: 133 DEMRNKDVGWWNAMIVGYVKAHDMDTAKCLFDNMLEKNVVSWTAIIAGYAQGNQFSQAIG 192

Query: 363 VFQRMHLEDV--EPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           VF++M   +V  +PDE+ MLAALSACA LG  +LG+WIH+YI KH     V L N LIDM
Sbjct: 193 VFRKMMSVEVSAKPDEVTMLAALSACAHLGEHELGEWIHSYIIKHRLRRTVSLNNTLIDM 252

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           YAKSGN+KKA+E+FESM+ RSV+TW+T+I              MFSRM+   I+
Sbjct: 253 YAKSGNVKKAVELFESMETRSVVTWSTVISALAVNGYGREAINMFSRMEMVGIR 306



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
 Frame = +3

Query: 198 RDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRM 377
           R V L N ++  YAK G++  A +LFE M  R+V++W+ +I+  A      +AI +F RM
Sbjct: 241 RTVSLNNTLIDMYAKSGNVKKAVELFESMETRSVVTWSTVISALAVNGYGREAINMFSRM 300

Query: 378 HLEDVEPDEIAMLAALSACADLGALDLGQ-WIHNYIDKHGFFGIVPLKNALIDMYAKSGN 554
            +  + P+ +  +A LSAC+  G ++ G+ +     +KHG    +     ++D++ ++G 
Sbjct: 301 EMVGIRPNSVTFIALLSACSHAGLVEEGRLYFKTMEEKHGISPDIRHYGCMVDLFGRAGY 360

Query: 555 IKKALEVFESM 587
           + +A  + + M
Sbjct: 361 LDEAANMVKMM 371


>ref|XP_007153011.1| hypothetical protein PHAVU_003G000200g [Phaseolus vulgaris]
           gi|561026365|gb|ESW25005.1| hypothetical protein
           PHAVU_003G000200g [Phaseolus vulgaris]
          Length = 555

 Score =  253 bits (646), Expect = 4e-65
 Identities = 129/234 (55%), Positives = 172/234 (73%), Gaps = 2/234 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           D+YS PFALKAVV  S + VG +IH Q+I +G      V+T+LI MYSSC  V+ ARKLF
Sbjct: 132 DSYSFPFALKAVVSSSFLHVGHQIHSQAILSGFITHPNVLTSLIHMYSSCANVSSARKLF 191

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPE--RNVISWTAMIAGYAQTNQPSKA 356
           D    + V LWNAM+AGYAKVGD+ NAR+LFE MPE  R+V+SWT +I+GY +T+ P +A
Sbjct: 192 DAATFQHVSLWNAMLAGYAKVGDLSNARNLFETMPEKDRDVVSWTCLISGYTRTHCPHQA 251

Query: 357 ITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           IT+F+ M + +V+PD+IA+LAALSACADLGAL+LG WIH+YI++H    IV L N+LIDM
Sbjct: 252 ITLFRTMLVHNVQPDKIAILAALSACADLGALELGVWIHSYIERHKLPEIVSLCNSLIDM 311

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           YAKSG+I KA +VFE M+ ++++TWTT+I              +FS M++A +K
Sbjct: 312 YAKSGDIGKARQVFEGMERKTIVTWTTMIGGLALHGMGKEALELFSCMEKAGVK 365



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
 Frame = +3

Query: 204 VVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRMHL 383
           V L N+++  YAK GDI  AR +FE M  + +++WT MI G A      +A+ +F  M  
Sbjct: 302 VSLCNSLIDMYAKSGDIGKARQVFEGMERKTIVTWTTMIGGLALHGMGKEALELFSCMEK 361

Query: 384 EDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPL---KNALIDMYAKSGN 554
             V+P+E+  +  LSAC+ +G ++LG+  H +      FGI P       ++D+  + G 
Sbjct: 362 AGVKPNEVTFITILSACSHVGLVELGR--HYFTCMRKRFGIEPKIEHYGCMVDLLGRGGY 419

Query: 555 IKKALEVFESM 587
           +++A E+   M
Sbjct: 420 LEEAKELVRLM 430


>ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478874|gb|AES60077.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 526

 Score =  251 bits (642), Expect = 1e-64
 Identities = 130/230 (56%), Positives = 169/230 (73%), Gaps = 2/230 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           D+YS+P+ LK+VV L+   +G++IHC  + TGLD +V V ++LI+MYS C  V  ARKLF
Sbjct: 111 DSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSVCSSLIQMYS-CYDVCSARKLF 169

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERN--VISWTAMIAGYAQTNQPSKA 356
           D       VL NAM+  Y KVGD+ NAR LF+ M ER+  V SWTAMI+GY Q + P++A
Sbjct: 170 DEFGGNGCVL-NAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEA 228

Query: 357 ITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           I +F+RM LE+V+PDEIA+LA LSACADLGAL LG+WIHNYI+KH    IVPL N+LIDM
Sbjct: 229 IKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDM 288

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDR 686
           YAKSGNI+KALE+FE+MKH+++ITWTT+I              +FS M++
Sbjct: 289 YAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEK 338



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 45/129 (34%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
 Frame = +3

Query: 195 SRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQR 374
           S+ V L+N+++  YAK G+I  A +LFE M  + +I+WT MIAG A      +A+ VF  
Sbjct: 276 SKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSC 335

Query: 375 MHLED-VEPDEIAMLAALSACADLGALDLGQ-WIHNYIDKHGFFGIVPLKNALIDMYAKS 548
           M  ED V+P+E+  +A LSAC+ +G ++LG+ +  +   ++G    +     +ID+  ++
Sbjct: 336 MEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRA 395

Query: 549 GNIKKALEV 575
           G++++A E+
Sbjct: 396 GHLQEAKEM 404


>ref|XP_004498089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cicer arietinum]
          Length = 546

 Score =  250 bits (639), Expect = 3e-64
 Identities = 126/240 (52%), Positives = 173/240 (72%), Gaps = 8/240 (3%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGC-VTDARKL 179
           D+YS+P+ LKAV  L+ + +G+++HC  + TGLD  V V+ ++++MY  CG  V  ARK+
Sbjct: 124 DSYSLPYVLKAVGSLNDIVLGKQVHCIGVVTGLDCYVSVVASIVQMYCCCGNDVWSARKV 183

Query: 180 FDRT----NSRDVVLWNAMVAGYAKVGDIDNARDLFELMPE--RNVISWTAMIAGYAQTN 341
           FD            +WNAM+ GYAKVGD+ NA+ LF+ MP+  +NV SWTA+I+GY Q +
Sbjct: 184 FDDGLVLFGGDGGAVWNAMIVGYAKVGDVFNAQKLFDKMPQMDKNVFSWTALISGYTQAH 243

Query: 342 QPSKAITVFQRMHLEDVEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKN 521
            P++AI +F+RM LE+V+PDEIA+LA LSACADLGAL LG+WIHNYI+KH    IVPL N
Sbjct: 244 NPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLNKIVPLYN 303

Query: 522 ALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDR-ARIK 698
           +LIDMYAKSGNI KAL++FE+M H+++ITWTT+I              +FSRM++  R+K
Sbjct: 304 SLIDMYAKSGNISKALKLFENMNHKTIITWTTMIAGLALHGLGKEALHVFSRMEKEGRVK 363



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 4/132 (3%)
 Frame = +3

Query: 204 VVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRMHL 383
           V L+N+++  YAK G+I  A  LFE M  + +I+WT MIAG A      +A+ VF RM  
Sbjct: 299 VPLYNSLIDMYAKSGNISKALKLFENMNHKTIITWTTMIAGLALHGLGKEALHVFSRMEK 358

Query: 384 ED-VEPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPL---KNALIDMYAKSG 551
           E  V+P+E+  +A L AC+ +  ++ G  ++ +      +GI P       +ID+  ++G
Sbjct: 359 EGRVKPNEVTFIAVLCACSHVRLVEQG--LNYFTSMRSRYGIEPKVEHYGCMIDLLGRAG 416

Query: 552 NIKKALEVFESM 587
            +++A E+   M
Sbjct: 417 LVQEAKELVSQM 428


>ref|XP_004228988.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Solanum lycopersicum]
          Length = 508

 Score =  246 bits (627), Expect = 7e-63
 Identities = 128/234 (54%), Positives = 164/234 (70%), Gaps = 2/234 (0%)
 Frame = +3

Query: 3   DTYSIPFALKAVVRLSRVKVGREIHCQSIGTGLDLDVQVITALIRMYSSCGCVTDARKLF 182
           DTYSIPF L AV  L       +IHC++I TGL+ DV V T+L+R+YSS GC++DARK+F
Sbjct: 76  DTYSIPFVLNAVTCLI---TSTQIHCEAILTGLNNDVHVATSLVRIYSSFGCISDARKVF 132

Query: 183 DRTNSRDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAIT 362
           D   ++DV LWNAM+AGY K  D+D A+ LF  M E+NV+SWT +IAGY Q NQ S+AI 
Sbjct: 133 DEMRNKDVSLWNAMIAGYVKAHDMDTAKYLFVNMLEKNVVSWTTIIAGYTQGNQFSQAIG 192

Query: 363 VFQRMHLEDV--EPDEIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDM 536
           VF++M   +V  +PDE+ ML ALSACA LG  +LG+WIH+YI KH F   V L N LIDM
Sbjct: 193 VFRKMMSVEVSAKPDEVTMLVALSACAHLGEHELGEWIHSYIIKHRFRRTVSLNNTLIDM 252

Query: 537 YAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXXMFSRMDRARIK 698
           YAKSGN+KKA+E+FESM+ RS +TW+T+I              MFSRM+   I+
Sbjct: 253 YAKSGNVKKAVELFESMEIRSGVTWSTVISALAVNGCGREAINMFSRMEMVGIR 306



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 36/131 (27%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
 Frame = +3

Query: 198 RDVVLWNAMVAGYAKVGDIDNARDLFELMPERNVISWTAMIAGYAQTNQPSKAITVFQRM 377
           R V L N ++  YAK G++  A +LFE M  R+ ++W+ +I+  A      +AI +F RM
Sbjct: 241 RTVSLNNTLIDMYAKSGNVKKAVELFESMEIRSGVTWSTVISALAVNGCGREAINMFSRM 300

Query: 378 HLEDVEPDEIAMLAALSACADLGALDLGQ-WIHNYIDKHGFFGIVPLKNALIDMYAKSGN 554
            +  + P+ +  +A LSAC+  G ++ G+ +     + HG    +     ++D++ ++G 
Sbjct: 301 EMVGIRPNSVTFIALLSACSHAGLVEEGRLYFKTMEENHGISPDIRHYGCMVDLFGRAGY 360

Query: 555 IKKALEVFESM 587
           + +A  + + M
Sbjct: 361 LDEAANMVKMM 371