BLASTX nr result
ID: Paeonia23_contig00027364
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00027364
(809 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 181 2e-43
ref|XP_004159272.1| PREDICTED: uncharacterized mitochondrial pro... 147 2e-40
gb|ABR16288.1| unknown [Picea sitchensis] 155 2e-35
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 149 2e-33
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 144 4e-32
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 141 2e-31
ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group] g... 128 2e-30
emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group] 128 2e-30
gb|AAT38797.2| Polyprotein, putative [Solanum demissum] 135 2e-29
ref|XP_007030765.1| Uncharacterized protein TCM_026511 [Theobrom... 130 7e-28
gb|AAS90682.1| pupative polyprotein [Oryza sativa Japonica Group] 122 9e-28
ref|NP_001174195.1| Os05g0126900 [Oryza sativa Japonica Group] g... 122 9e-28
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 129 1e-27
gb|ABA95567.1| retrotransposon protein, putative, Ty1-copia subc... 128 2e-27
gb|ABA91088.1| retrotransposon protein, putative, Ty1-copia subc... 128 2e-27
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle... 127 5e-27
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle... 126 8e-27
gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis c... 125 1e-26
gb|AFK88552.1| reverse transcriptase, partial [Arabidopsis halle... 125 2e-26
gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group] 125 2e-26
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 181 bits (460), Expect = 2e-43
Identities = 118/263 (44%), Positives = 151/263 (57%), Gaps = 1/263 (0%)
Frame = -1
Query: 788 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFF-EEVYVEQSPGYVKKGEES 612
IFA V R+E + Q K + IK S FLN +E++V Q GYV++GEE
Sbjct: 880 IFAPVTRIETIRLILSLAAQNGWKVHQMDIK--SAFLNGHLKDEIFVAQPLGYVQRGEEE 937
Query: 611 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 432
KV +LKKALYGLKQA + YS ID+ FLK G R +++ K
Sbjct: 938 KVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDK-------YGKFLI 990
Query: 431 XXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 252
LY L+ FLG IEV Q++ I +SQ+KYA DLL++F
Sbjct: 991 VSLYMSDMGLIHYFLG-------------------IEVNQNEGEIVISQQKYAHDLLKKF 1031
Query: 251 KMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFM 72
+M A PC+TPM+A+LKL KD +G D ++Y S VGSLMYLT TR D++F VSMLS FM
Sbjct: 1032 RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLSRFM 1091
Query: 71 VSPKRSHWEAGKIVFCYVLGTID 3
+PKRSHWEAGK V Y+LGTI+
Sbjct: 1092 TNPKRSHWEAGKRVLRYILGTIN 1114
>ref|XP_004159272.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Cucumis sativus]
Length = 170
Score = 147 bits (371), Expect(2) = 2e-40
Identities = 76/111 (68%), Positives = 84/111 (75%)
Frame = -1
Query: 335 FPWIEVKQSDEGIFLSQKKYAKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDFDATIY 156
F IEVKQ D I + QKKYAKDLL++FKM A P +TPME LKL K V FDATIY
Sbjct: 25 FLGIEVKQGDNEIAIFQKKYAKDLLKKFKMENAYPANTPMELGLKLSKHDVSEAFDATIY 84
Query: 155 TSFVGSLMYLTTTRLDLMFFVSMLSIFMVSPKRSHWEAGKIVFCYVLGTID 3
S VGSLMYLTTTR D+MFFVS+LS FM SPKRSHWEAGK V Y+LGT+D
Sbjct: 85 RSLVGSLMYLTTTRPDIMFFVSLLSRFMTSPKRSHWEAGKRVLRYILGTVD 135
Score = 45.8 bits (107), Expect(2) = 2e-40
Identities = 19/31 (61%), Positives = 28/31 (90%)
Frame = -2
Query: 403 LCEDF*ETMKKEFEMTDMGLLYHFLGLKLSK 311
+ E+F E+MKKEFEMTDMGLL++FLG+++ +
Sbjct: 2 MIEEFRESMKKEFEMTDMGLLHYFLGIEVKQ 32
>gb|ABR16288.1| unknown [Picea sitchensis]
Length = 363
Score = 155 bits (391), Expect = 2e-35
Identities = 106/269 (39%), Positives = 145/269 (53%), Gaps = 3/269 (1%)
Frame = -1
Query: 800 LSYN-IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFFEE-VYVEQSPGYVK 627
+ YN FA V RL+ + Q K + +K S FLN + EE VYV+Q P Y
Sbjct: 60 VDYNETFAPVARLDTIRMVLAIAAQHNWKVYQMDVK--SAFLNGYLEEEVYVQQPPRYEV 117
Query: 626 KGEESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTL-RKIKRVXXXXX 450
+G+E KV RLKKAL GLKQA + YS ID+ +KN + TL K+
Sbjct: 118 RGQEDKVYRLKKALNGLKQAPRAWYSKIDSYMIKN--EFIRSTSEPTLYTKVNEQGQILI 175
Query: 449 XXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAK 270
+Y + F ++ G F IEV Q D+GIF+ Q KYA+
Sbjct: 176 VCLYVDDLIY-TGNLTIDMFKSAMKKEFEMTDLGLMNYFLGIEVTQKDKGIFICQSKYAR 234
Query: 269 DLLRRFKMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFFVS 90
D+L+RF+M P STP+ KL ++ DFD+TI+ VGSLMYLT TR D+M+ VS
Sbjct: 235 DVLKRFRMINCSPVSTPVGVGTKLSREQNEMDFDSTIFRKLVGSLMYLTATRPDIMYGVS 294
Query: 89 MLSIFMVSPKRSHWEAGKIVFCYVLGTID 3
++S FM +PK SHW+AGK + Y+ GT++
Sbjct: 295 LISRFMDTPKNSHWQAGKRLLRYIAGTMN 323
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 149 bits (375), Expect = 2e-33
Identities = 102/262 (38%), Positives = 133/262 (50%), Gaps = 1/262 (0%)
Frame = -1
Query: 788 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFFEE-VYVEQSPGYVKKGEES 612
+FA V R+E + + S Q K + S FLN EE VY+EQ PGY+K GEE
Sbjct: 917 VFAPVVRMETI--RLLISQAAQFKWPIFQMDVKSAFLNGVLEEEVYIEQPPGYMKIGEEK 974
Query: 611 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 432
KV +LKKALYGLKQA + + ID F +NG + H+ K
Sbjct: 975 KVLKLKKALYGLKQAPRAWNTRIDTYFKENGFKQCPYE-HALYAKNNGGNMIFVALYVDD 1033
Query: 431 XXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 252
++ F G G F +EV+Q + GIF+SQ+KYAK++L+++
Sbjct: 1034 LIFMGNNNDMIEEFKGTMRREFEMTDLGLMKFFLGLEVRQKETGIFVSQEKYAKEILKKY 1093
Query: 251 KMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFM 72
KM P S PME KL K G DA+ Y S VGSL YLT TR DL V ++S FM
Sbjct: 1094 KMENCNPVSIPMEPGAKLSKFDGGERVDASRYRSLVGSLRYLTCTRPDLSLSVGIISRFM 1153
Query: 71 VSPKRSHWEAGKIVFCYVLGTI 6
P SHW+A K V Y+ GT+
Sbjct: 1154 EEPVYSHWKALKRVLRYIQGTV 1175
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 144 bits (363), Expect = 4e-32
Identities = 102/274 (37%), Positives = 142/274 (51%), Gaps = 12/274 (4%)
Frame = -1
Query: 788 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFFEE-VYVEQSPGYVKKGEES 612
+FA V R+E + Q++ + + +K S FLN + EE VYVEQ G+V +G+E
Sbjct: 608 VFAPVARMETIRLLISLAAQMKWRIFQFDVK--SAFLNGYLEEDVYVEQPMGFVIEGQEG 665
Query: 611 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 432
KV +L KALYGLKQA + +HID F NG VH + L +K
Sbjct: 666 KVLKLNKALYGLKQAPRAWNTHIDKYFQDNGF--VHCQNEYALY-VKTFNNGDVLFICLY 722
Query: 431 XXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPW-----------IEVKQSDEGIFLSQ 285
L+ F GN D S F +EVKQ+ GIF+SQ
Sbjct: 723 VD------DLI--FTGNNPNLFEDFKESMSREFDMTDMGLMSYYLGMEVKQTQNGIFVSQ 774
Query: 284 KKYAKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDL 105
++Y K++L++F M + P +TPME LKL K G D+TI+ S VGSL YLT TR D+
Sbjct: 775 ERYTKEVLKKFNMLDCNPVNTPMEGGLKLSKFDEGEKVDSTIFKSLVGSLRYLTNTRPDI 834
Query: 104 MFFVSMLSIFMVSPKRSHWEAGKIVFCYVLGTID 3
++ V ++ FM +P H +A K + CY+ GTID
Sbjct: 835 LYAVGVVCRFMEAPTSPHLKAAKRILCYLKGTID 868
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 141 bits (356), Expect = 2e-31
Identities = 96/263 (36%), Positives = 136/263 (51%), Gaps = 1/263 (0%)
Frame = -1
Query: 788 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 612
+FA V RLE + + S Q K + FLN +F EEVY+EQ GY+ KGEE
Sbjct: 857 VFAPVARLETV--RLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQGYIVKGEED 914
Query: 611 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 432
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 915 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDD 973
Query: 431 XXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 252
S+ F + G + IEVKQ D IF++Q+ YAK++L++F
Sbjct: 974 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGYAKEVLKKF 1033
Query: 251 KMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFM 72
KM ++ P TPME +KL K G D T + S VGSL YLT TR D+++ V ++S +M
Sbjct: 1034 KMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYM 1093
Query: 71 VSPKRSHWEAGKIVFCYVLGTID 3
P +H++A K + Y+ GT++
Sbjct: 1094 EHPTTTHFKAAKRILRYIKGTVN 1116
>ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group]
gi|20514806|gb|AAM23251.1|AC092553_17 Putative pol
polyprotein [Oryza sativa Japonica Group]
gi|21326494|gb|AAM47622.1|AC122147_11 Putative pol
polyprotein [Oryza sativa Japonica Group]
gi|31430018|gb|AAP51989.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group] gi|113638707|dbj|BAF26012.1| Os10g0130700
[Oryza sativa Japonica Group]
Length = 1426
Score = 128 bits (321), Expect(2) = 2e-30
Identities = 88/236 (37%), Positives = 123/236 (52%), Gaps = 7/236 (2%)
Frame = -1
Query: 689 STFLN-NFFEEVYVEQSPGYVKKGEESKVCRLKKALYGLKQAQKT*YSHIDNS-----FL 528
S FLN + EEVYV Q PG+++KG+E +V RLKKALYGLKQA + + + N+ F+
Sbjct: 1026 SAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRAWNAKLHNTLISLNFI 1085
Query: 527 KNGSRG-VHMRMHSTLRKIKRVXXXXXXXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*Y 351
K+ + V++R + R I V S + F +++ R
Sbjct: 1086 KSETESAVYVRGTGSSRLIVGVYVDDLIISGAQA-------SEIDFFKEEMKKKFRMSDL 1138
Query: 350 GASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDF 171
G + +EV Q D+G+FLSQ YA +L + M PMEA LKL ++ G
Sbjct: 1139 GLLSYYLGMEVVQKDDGVFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESGGEGV 1198
Query: 170 DATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFMVSPKRSHWEAGKIVFCYVLGTID 3
D+T+Y S VGSL YL TR DL + V +S FM P HW A K + Y+ GT+D
Sbjct: 1199 DSTMYRSTVGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHILRYIAGTLD 1254
Score = 31.6 bits (70), Expect(2) = 2e-30
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -3
Query: 753 ETVRLLLAIAAQRG*RVHQIDV 688
ETVRLL+A+AA +G +H +DV
Sbjct: 1003 ETVRLLIAVAANKGWEIHHMDV 1024
>emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]
Length = 1426
Score = 128 bits (321), Expect(2) = 2e-30
Identities = 88/236 (37%), Positives = 123/236 (52%), Gaps = 7/236 (2%)
Frame = -1
Query: 689 STFLN-NFFEEVYVEQSPGYVKKGEESKVCRLKKALYGLKQAQKT*YSHIDNS-----FL 528
S FLN + EEVYV Q PG+++KG+E +V RLKKALYGLKQA + + + N+ F+
Sbjct: 1026 SAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRAWNAKLHNTLISLNFI 1085
Query: 527 KNGSRG-VHMRMHSTLRKIKRVXXXXXXXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*Y 351
K+ + V++R + R I V S + F +++ R
Sbjct: 1086 KSETESAVYVRGTGSSRLIVGVYVDDLIISGAQA-------SEIDFFKEEMKKKFRMSDL 1138
Query: 350 GASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDF 171
G + +EV Q D+G+FLSQ YA +L + M PMEA LKL ++ G
Sbjct: 1139 GLLSYYLGMEVVQKDDGVFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESGGEGV 1198
Query: 170 DATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFMVSPKRSHWEAGKIVFCYVLGTID 3
D+T+Y S VGSL YL TR DL + V +S FM P HW A K + Y+ GT+D
Sbjct: 1199 DSTMYRSTVGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHILRYIAGTLD 1254
Score = 31.6 bits (70), Expect(2) = 2e-30
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -3
Query: 753 ETVRLLLAIAAQRG*RVHQIDV 688
ETVRLL+A+AA +G +H +DV
Sbjct: 1003 ETVRLLIAVAANKGWEIHHMDV 1024
>gb|AAT38797.2| Polyprotein, putative [Solanum demissum]
Length = 1793
Score = 135 bits (340), Expect = 2e-29
Identities = 89/244 (36%), Positives = 126/244 (51%), Gaps = 1/244 (0%)
Frame = -1
Query: 737 SWQLQLKEDEEFIK*MSTFLNNFF-EEVYVEQSPGYVKKGEESKVCRLKKALYGLKQAQK 561
SWQ+ + + S FLN+ EE+YVEQ G+ G+E +V L KALYGLKQ+ +
Sbjct: 958 SWQIHQLDVK------SAFLNSLLAEEIYVEQPDGFSIPGKEDQVYLLTKALYGLKQSPR 1011
Query: 560 T*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXXXXLY*Q**SLV*RFLGN 381
Y +DN ++ G R S +V L+ RF
Sbjct: 1012 AWYERMDNHLIQLG----FSRSQSEATLYVKVTAGSKI-------------ELIQRFKDE 1054
Query: 380 YEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRFKMGEALPCSTPMEADLK 201
E+ G F +EV QS +GIF+ Q+KY D+L RFKM + P STP+ +K
Sbjct: 1055 MEKIFEMTDLGVMKYFLGMEVLQSSDGIFICQQKYILDILNRFKMQDCKPVSTPISTGVK 1114
Query: 200 LIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFMVSPKRSHWEAGKIVFCY 21
L KD D ++Y S +G+L+YLT +RLD++F VS+LS FM SP+ +H+ K V Y
Sbjct: 1115 LGKDEDSKKVDDSMYRSLIGNLLYLTASRLDILFVVSLLSRFMHSPRDTHFTTAKRVLRY 1174
Query: 20 VLGT 9
+ GT
Sbjct: 1175 IKGT 1178
Score = 60.8 bits (146), Expect = 6e-07
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 6/225 (2%)
Frame = -1
Query: 665 EEVYVEQSPGYVKKGEESKVCRLKKALYGLKQAQKT*YSHIDN-----SFLKNGS-RGVH 504
EEVY+EQ G+ K + +CRL KA Y LKQA + Y+ + N F+K+ S +
Sbjct: 1506 EEVYMEQPRGFEDKTCPTHICRLHKAFYRLKQAPRACYNELKNHLLLLGFIKSESDNSLF 1565
Query: 503 MRMHSTLRKIKRVXXXXXXXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWI 324
+R HS V S+V + + + R++D A F I
Sbjct: 1566 VRHHSHAIVYLLVYVDDIIVTGNNT-------SVVNQVISSLAARVKD--LEALTYFLGI 1616
Query: 323 EVKQSDEGIFLSQKKYAKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFV 144
EV +S +GI ++Q Y +D+LR M + TPM + +++K G D +A I+
Sbjct: 1617 EVIRSVDGIIMTQSTYKRDILREENMADCKLAKTPM-STTEVLKIHEG-DREAPIFV--F 1672
Query: 143 GSLMYLTTTRLDLMFFVSMLSIFMVSPKRSHWEAGKIVFCYVLGT 9
S +L ++ + + + I HW+ K V Y+ GT
Sbjct: 1673 HSSRHLFCSKQTVTIYANSSKI--------HWKIVKRVLRYLQGT 1709
>ref|XP_007030765.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
gi|508719370|gb|EOY11267.1| Uncharacterized protein
TCM_026511 [Theobroma cacao]
Length = 1318
Score = 130 bits (326), Expect = 7e-28
Identities = 89/235 (37%), Positives = 122/235 (51%), Gaps = 6/235 (2%)
Frame = -1
Query: 689 STFLNNFF-EEVYVEQSPGYVKKGEESKVCRLKKALYGLKQAQKT*YSHID-----NSFL 528
S FLN E++YVEQ G+V+KG+E KVC+L KALYGLKQA + Y ID N F
Sbjct: 917 SAFLNGTISEDIYVEQPEGFVEKGKEDKVCKLIKALYGLKQAPRAWYKKIDAYLRSNKFF 976
Query: 527 KNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*YG 348
+ S + + S+L KI+ + S + F + G
Sbjct: 977 CSESEPT-LYVKSSLGKIQLIVSVYVDDLLITGPNK----SDLNSFRNKMKSEFDMSDLG 1031
Query: 347 ASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDFD 168
F +E++Q + I L QKKYA +LL+RFKM P STP+ KL KD D
Sbjct: 1032 EMSYFLGLEIQQRSDFICLHQKKYAGELLKRFKMEGCKPVSTPLTTGTKLCKDDGSTLVD 1091
Query: 167 ATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFMVSPKRSHWEAGKIVFCYVLGTID 3
T Y +G L+YL+ +R D+M+ S+LS FM SP ++H A K V YV GT++
Sbjct: 1092 VTQYRKLIGCLLYLSASRPDIMYTTSLLSRFMQSPTKTHLTAAKRVLRYVKGTLN 1146
>gb|AAS90682.1| pupative polyprotein [Oryza sativa Japonica Group]
Length = 1404
Score = 122 bits (306), Expect(2) = 9e-28
Identities = 93/236 (39%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Frame = -1
Query: 689 STFLNNFF-EEVYVEQSPGYVKKGEESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNG-- 519
S FLN EEVYV Q PG+V G+E KV RL KALYGL+QA + Y+ +D S L G
Sbjct: 1002 SAFLNGELKEEVYVAQPPGFVVDGKEQKVLRLVKALYGLRQAPRAWYTKLDASLLSLGFH 1061
Query: 518 ----SRGVHMRMHSTLRKIKRVXXXXXXXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*Y 351
V+MR + R + V S + +F E +
Sbjct: 1062 RSASEHAVYMRGANARRLVVGVYVDDLVITGGNH-------SELDQFKKEMRETFQMSDL 1114
Query: 350 GASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDF 171
G + +EV Q+DEGI LSQ YAK +L M P TPME LKL K
Sbjct: 1115 GLLRYYLGLEVSQTDEGITLSQGAYAKKILEAAGMVGCNPSQTPMEPRLKLSKLSTSPCV 1174
Query: 170 DATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFMVSPKRSHWEAGKIVFCYVLGTID 3
DAT Y VGSL YL +R DL F V +S FM P H A K V YV GTI+
Sbjct: 1175 DATDYRKIVGSLRYLVNSRPDLAFSVGYVSRFMEKPTTEHLAAVKRVLRYVAGTIN 1230
Score = 28.5 bits (62), Expect(2) = 9e-28
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 753 ETVRLLLAIAAQRG*RVHQIDV 688
E+VRLLLA AA G VH +DV
Sbjct: 979 ESVRLLLAYAASEGWAVHHMDV 1000
>ref|NP_001174195.1| Os05g0126900 [Oryza sativa Japonica Group]
gi|255675982|dbj|BAH92923.1| Os05g0126900 [Oryza sativa
Japonica Group]
Length = 742
Score = 122 bits (306), Expect(2) = 9e-28
Identities = 93/236 (39%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Frame = -1
Query: 689 STFLNNFF-EEVYVEQSPGYVKKGEESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNG-- 519
S FLN EEVYV Q PG+V G+E KV RL KALYGL+QA + Y+ +D S L G
Sbjct: 340 SAFLNGELKEEVYVAQPPGFVVDGKEQKVLRLVKALYGLRQAPRAWYTKLDASLLSLGFH 399
Query: 518 ----SRGVHMRMHSTLRKIKRVXXXXXXXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*Y 351
V+MR + R + V S + +F E +
Sbjct: 400 RSASEHAVYMRGANARRLVVGVYVDDLVITGGNH-------SELDQFKKEMRETFQMSDL 452
Query: 350 GASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDF 171
G + +EV Q+DEGI LSQ YAK +L M P TPME LKL K
Sbjct: 453 GLLRYYLGLEVSQTDEGITLSQGAYAKKILEAAGMVGCNPSQTPMEPRLKLSKLSTSPCV 512
Query: 170 DATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFMVSPKRSHWEAGKIVFCYVLGTID 3
DAT Y VGSL YL +R DL F V +S FM P H A K V YV GTI+
Sbjct: 513 DATDYRKIVGSLRYLVNSRPDLAFSVGYVSRFMEKPTTEHLAAVKRVLRYVAGTIN 568
Score = 28.5 bits (62), Expect(2) = 9e-28
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 753 ETVRLLLAIAAQRG*RVHQIDV 688
E+VRLLLA AA G VH +DV
Sbjct: 317 ESVRLLLAYAASEGWAVHHMDV 338
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 129 bits (324), Expect = 1e-27
Identities = 97/262 (37%), Positives = 130/262 (49%), Gaps = 1/262 (0%)
Frame = -1
Query: 785 FAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEESK 609
F+ V R E + QL L + +K S FLN + EEVYV Q G++ G E+K
Sbjct: 900 FSPVARFETVRVVLALAAQLHLPVYQFDVK--SAFLNGDLEEEVYVSQPQGFMITGNENK 957
Query: 608 VCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXXX 429
V +L+KALYGLKQA + YS ID+ F +G R L+K
Sbjct: 958 VYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLVCLYVDDM 1017
Query: 428 XLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRFK 249
SLV F N G F +EV Q +GIF+SQKKYA+DLL++F+
Sbjct: 1018 IYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQKKYAEDLLKKFQ 1077
Query: 248 MGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFMV 69
M +TPM + KL + + ++ S VG L YLT TR D+ F VS++S F+
Sbjct: 1078 MMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVVSRFLQ 1137
Query: 68 SPKRSHWEAGKIVFCYVLGTID 3
SP + H+ A K V YV GT D
Sbjct: 1138 SPTKQHFGAAKRVLRYVAGTTD 1159
>gb|ABA95567.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1465
Score = 128 bits (322), Expect = 2e-27
Identities = 96/267 (35%), Positives = 130/267 (48%), Gaps = 7/267 (2%)
Frame = -1
Query: 788 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFFEE-VYVEQSPGYVKKGEES 612
+FA V R+E + Q + +K S FLN EE VYV+Q G+V +GEE
Sbjct: 1037 VFAPVARMETVRLLIAMAAQEGWQVHHMDVK--SAFLNGDLEEDVYVQQPLGFVVEGEEG 1094
Query: 611 KVCRLKKALYGLKQAQKT*YSHIDNS-----FLKNGSRG-VHMRMHSTLRKIKRVXXXXX 450
KV + KKALYGL+QA + Y+ +D+S F+K+ + V+ R H R + V
Sbjct: 1095 KVLKPKKALYGLRQAPRAWYAKLDSSLAGLNFVKSATENAVYTRGHGDSRLVVGVYVDDL 1154
Query: 449 XXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAK 270
S + RF + G + +EVKQ D+GI ++Q YA+
Sbjct: 1155 IISGPSL-------SEIIRFKEQMKTLFSMSDLGLLSYYLGMEVKQGDDGIMMTQAGYAR 1207
Query: 269 DLLRRFKMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFFVS 90
+L + M PC PME LKL K G DAT + S +GSL YL TR DL + V
Sbjct: 1208 RILEKAGMEGCNPCQVPMEPRLKLSKGEPGECVDATEFRSLIGSLRYLVNTRPDLCYSVG 1267
Query: 89 MLSIFMVSPKRSHWEAGKIVFCYVLGT 9
+S FM +P HW A K V YV GT
Sbjct: 1268 YVSRFMENPTSKHWAAMKHVLQYVAGT 1294
>gb|ABA91088.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1399
Score = 128 bits (322), Expect = 2e-27
Identities = 96/267 (35%), Positives = 130/267 (48%), Gaps = 7/267 (2%)
Frame = -1
Query: 788 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFFEE-VYVEQSPGYVKKGEES 612
+FA V R+E + Q + +K S FLN EE VYV+Q G+V +GEE
Sbjct: 971 VFAPVARMETVRLLIAMAAQEGWQVHHMDVK--SAFLNGDLEEDVYVQQPLGFVVEGEEG 1028
Query: 611 KVCRLKKALYGLKQAQKT*YSHIDNS-----FLKNGSRG-VHMRMHSTLRKIKRVXXXXX 450
KV + KKALYGL+QA + Y+ +D+S F+K+ + V+ R H R + V
Sbjct: 1029 KVLKPKKALYGLRQAPRAWYAKLDSSLAGLNFVKSATENAVYTRGHGDSRLVVGVYVDDL 1088
Query: 449 XXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAK 270
S + RF + G + +EVKQ D+GI ++Q YA+
Sbjct: 1089 IISGPSL-------SEIIRFKEQMKTLFSMSDLGLLSYYLGMEVKQGDDGIMMTQAGYAR 1141
Query: 269 DLLRRFKMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFFVS 90
+L + M PC PME LKL K G DAT + S +GSL YL TR DL + V
Sbjct: 1142 RILEKAGMEGCNPCQVPMEPRLKLSKGEPGECVDATEFRSLIGSLRYLVNTRPDLCYSVG 1201
Query: 89 MLSIFMVSPKRSHWEAGKIVFCYVLGT 9
+S FM +P HW A K V YV GT
Sbjct: 1202 YVSRFMENPTSKHWAAMKHVLQYVAGT 1228
>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 127 bits (319), Expect = 5e-27
Identities = 80/207 (38%), Positives = 114/207 (55%), Gaps = 1/207 (0%)
Frame = -1
Query: 689 STFLN-NFFEEVYVEQSPGYVKKGEESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSR 513
S FLN + EEVY+EQ GY+ KGEE+KV RL KALYGLKQA + + ID F +
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRIDKYFKEKDFT 169
Query: 512 GVHMRMHSTLRKIKRVXXXXXXXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*YGASLSF 333
H+ KI++ S+ +F + + G +
Sbjct: 170 KCPYE-HALYIKIQKDDILIACLYVDDLIFTGNNPSMFEKFKKEMTKEFKMTDIGLMSYY 228
Query: 332 PWIEVKQSDEGIFLSQKKYAKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDFDATIYT 153
IEVKQ D GIF++Q+ YAK++L++FKM ++ P +TPME +KL K+ G D T +
Sbjct: 229 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFK 288
Query: 152 SFVGSLMYLTTTRLDLMFFVSMLSIFM 72
S VGSL YLT TR D+++ V ++S +M
Sbjct: 289 SLVGSLRYLTCTRPDILYAVGVVSRYM 315
>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 126 bits (317), Expect = 8e-27
Identities = 89/240 (37%), Positives = 125/240 (52%), Gaps = 1/240 (0%)
Frame = -1
Query: 788 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 612
+FA V RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE
Sbjct: 79 VFAPVARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEED 136
Query: 611 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 432
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 137 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKDDILIACLYVDD 195
Query: 431 XXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 252
S+ F + G + IEVKQ D IF++Q+ YAK++L++F
Sbjct: 196 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGYAKEVLKKF 255
Query: 251 KMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFM 72
KM ++ P +TPME +KL K+ G D T + S VGSL YLT TR D+++ V ++S +M
Sbjct: 256 KMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYM 315
>gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 315
Score = 125 bits (315), Expect = 1e-26
Identities = 87/240 (36%), Positives = 126/240 (52%), Gaps = 1/240 (0%)
Frame = -1
Query: 788 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 612
+FA V RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE+
Sbjct: 79 VFAPVARLETVRLIISLAPQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEEA 136
Query: 611 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 432
KV +LKKALYGLKQA + + ID F + H+ KI++
Sbjct: 137 KVLKLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKDDILIACLYVDD 195
Query: 431 XXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 252
S+ F + G + IEVKQ D IF++Q+ YAK++L++F
Sbjct: 196 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMYYYLGIEVKQEDNEIFITQEGYAKEVLKKF 255
Query: 251 KMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFFVSMLSIFM 72
K+ ++ P STPME +K K+ G D T++ S VGSL YLT TR D+++ V ++S +M
Sbjct: 256 KLDDSNPVSTPMECGIKFSKNEEGESVDPTLFKSLVGSLRYLTCTRPDILYAVGVVSRYM 315
>gb|AFK88552.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 125 bits (313), Expect = 2e-26
Identities = 79/207 (38%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Frame = -1
Query: 689 STFLN-NFFEEVYVEQSPGYVKKGEESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSR 513
S FLN + EEVY+EQ GY+ KGEE+KV RL KALYGLKQA + + ID F +
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRIDKYFKEKDFI 169
Query: 512 GVHMRMHSTLRKIKRVXXXXXXXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*YGASLSF 333
H+ KI++ S+ +F + + G +
Sbjct: 170 KCPYE-HALYIKIQKDDILIACLYVDDLIFTGNNPSMFEKFKKEMTKEFKMTDIGLMSYY 228
Query: 332 PWIEVKQSDEGIFLSQKKYAKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDFDATIYT 153
IEVKQ D GIF++Q+ YAK++ ++FKM ++ P +TPME +KL K+ G D T +
Sbjct: 229 LGIEVKQEDNGIFITQEGYAKEVFKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFK 288
Query: 152 SFVGSLMYLTTTRLDLMFFVSMLSIFM 72
S VGSL YLT TR D+++ V ++S +M
Sbjct: 289 SLVGSLRYLTCTRPDILYAVGVVSRYM 315
>gb|AAV59370.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1332
Score = 125 bits (313), Expect = 2e-26
Identities = 97/270 (35%), Positives = 131/270 (48%), Gaps = 9/270 (3%)
Frame = -1
Query: 788 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 612
+FA V R+E + Q + +K S FLN + EEVYV Q G+ GEE+
Sbjct: 900 VFAPVARIETVRSLLALAAQEGWQVHHMDVK--SAFLNGDLEEEVYVSQPLGFEVTGEEA 957
Query: 611 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRG------VHMRM--HSTLRKIKRVXXX 456
KV RL KALYGL+QA + Y+ +D + +K G G V+ R HSTL V
Sbjct: 958 KVYRLHKALYGLRQAPRAWYAKLDATLIKMGFEGSTSDPAVYKRNSEHSTLIVGVYVDDL 1017
Query: 455 XXXXXXXXXXLY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKY 276
S++ F ++ + G + I+VKQ+ GI L+Q Y
Sbjct: 1018 VIIGSQV---------SVIQGFKVEMQKEFKMSDLGLLSFYLGIQVKQTATGIALNQSAY 1068
Query: 275 AKDLLRRFKMGEALPCSTPMEADLKLIKDVVGHDFDATIYTSFVGSLMYLTTTRLDLMFF 96
A ++L++ M PC PMEA L+L K+ DAT Y S +GSL YL TRLDL +
Sbjct: 1069 ALNILKKNGMDGCNPCQVPMEARLRLSKESTNSLVDATQYRSLIGSLRYLANTRLDLAYA 1128
Query: 95 VSMLSIFMVSPKRSHWEAGKIVFCYVLGTI 6
V LS FM P H A K + YV GT+
Sbjct: 1129 VGYLSRFMEKPATDHLAAAKHLLRYVAGTV 1158