BLASTX nr result
ID: Paeonia23_contig00027158
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00027158
(630 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera] 64 9e-20
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 65 4e-18
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 62 8e-17
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 60 8e-17
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera] 64 8e-17
ref|XP_003634235.1| PREDICTED: uncharacterized protein LOC100248... 62 2e-16
emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera] 57 9e-15
emb|CAN77763.1| hypothetical protein VITISV_026761 [Vitis vinifera] 54 2e-14
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 63 6e-14
emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera] 65 6e-14
emb|CAN77982.1| hypothetical protein VITISV_043417 [Vitis vinifera] 60 6e-13
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 55 8e-13
emb|CAN67041.1| hypothetical protein VITISV_030416 [Vitis vinifera] 64 8e-13
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 61 1e-12
emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera] 58 1e-12
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 52 2e-12
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 52 2e-12
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 52 2e-12
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 52 2e-12
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 59 4e-12
>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
Length = 623
Score = 63.9 bits (154), Expect(2) = 9e-20
Identities = 34/54 (62%), Positives = 40/54 (74%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKGF Q+KGIDF+EIFSP V MS I VVLGL S+NL +E+ D K F
Sbjct: 422 KARLVVKGFSQKKGIDFEEIFSP-VVKMSLIRVVLGLVASMNLEIEQLDGKTAF 474
Score = 59.3 bits (142), Expect(2) = 9e-20
Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE------YSKLVSFIIDHGYQGITSDHYVFVK 629
FLH DL+EE+YM Q EGF K KE Y K SF+++HGY T DH VFVK
Sbjct: 474 FLHGDLEEEMYMEQPEGFTIKSKEHLAPRQXYKKFDSFMVEHGYDRTTFDHCVFVK 529
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 65.1 bits (157), Expect(2) = 4e-18
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKGF QRKGIDF EIFSP V M+ I VLGLA SLNL VE+ D+K F
Sbjct: 876 KARLVVKGFNQRKGIDFDEIFSP-VVKMTSIRTVLGLAASLNLEVEQMDVKTAF 928
Score = 52.4 bits (124), Expect(2) = 4e-18
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH DL+EEIYM Q +GF+ KGKE+ Y K S + HGY+
Sbjct: 928 FLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGYKKT 987
Query: 603 TSDHYVFVK 629
TSDH VF +
Sbjct: 988 TSDHCVFAQ 996
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 61.6 bits (148), Expect(2) = 8e-17
Identities = 34/54 (62%), Positives = 40/54 (74%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKGF QRKGIDF EIFSP V MS I +VL LA +L+L VE+ D+K F
Sbjct: 819 KARLVVKGFRQRKGIDFNEIFSP-VVKMSSIRIVLSLAATLDLEVEQMDVKTAF 871
Score = 51.6 bits (122), Expect(2) = 8e-17
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH DL+EEIYM Q +GF +GKE+ Y K S + + GY+
Sbjct: 871 FLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKT 930
Query: 603 TSDHYVFVK 629
TSDH VFVK
Sbjct: 931 TSDHCVFVK 939
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 59.7 bits (143), Expect(2) = 8e-17
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKGF Q+KGIDF EIFSP V S I VVLGLA L++ +E+ D+K F
Sbjct: 873 KARLVVKGFSQKKGIDFDEIFSP-VVKFSSIRVVLGLAARLDIEIEQMDVKTAF 925
Score = 53.5 bits (127), Expect(2) = 8e-17
Identities = 30/68 (44%), Positives = 35/68 (51%), Gaps = 19/68 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH DL EEIYM Q EGF+ KGKE+ Y K S + HGY+
Sbjct: 925 FLHGDLDEEIYMEQPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKT 984
Query: 603 TSDHYVFV 626
+SDH VFV
Sbjct: 985 SSDHCVFV 992
>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
Length = 809
Score = 63.9 bits (154), Expect(2) = 8e-17
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KA+ +VKGF Q KGIDF EIFSP V MSFI VVLGLA SL+L +E+ D+K F
Sbjct: 354 KAKLVVKGFIQNKGIDFDEIFSP-VVKMSFIRVVLGLAASLDLEIEQMDVKTTF 406
Score = 49.3 bits (116), Expect(2) = 8e-17
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 19/69 (27%)
Frame = +3
Query: 477 TFLHSDLKEEIYMMQYEGFEAKGKEEYS-------------------KLVSFIIDHGYQG 599
TFLH DL +EIYM Q EGF KGKE+Y+ K S + + GY+
Sbjct: 405 TFLHGDLDKEIYMEQLEGFIIKGKEDYACKLKKSLYGLKQAPRQWYKKFESVMGEQGYKK 464
Query: 600 ITSDHYVFV 626
TS+H VFV
Sbjct: 465 TTSNHCVFV 473
>ref|XP_003634235.1| PREDICTED: uncharacterized protein LOC100248387 [Vitis vinifera]
Length = 952
Score = 62.0 bits (149), Expect(2) = 2e-16
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKGF Q+KGIDF EIFSP V M+ I VVLGLA SL+L +++ D+K F
Sbjct: 58 KARLVVKGFNQKKGIDFDEIFSP-VVKMTSIRVVLGLAASLDLEIQQMDVKTAF 110
Score = 49.7 bits (117), Expect(2) = 2e-16
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH DL +EIYM Q EGF KGKE+ Y K S + + GY+
Sbjct: 110 FLHGDLDKEIYMEQLEGFVLKGKEDYVCKLKKSLYGLKQALRQWYKKFESVMGEQGYRKT 169
Query: 603 TSDHYVFVK 629
TSDH VFV+
Sbjct: 170 TSDHCVFVQ 178
>emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]
Length = 384
Score = 56.6 bits (135), Expect(2) = 9e-15
Identities = 32/69 (46%), Positives = 35/69 (50%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH L+EEIYM Q EGF+ KGKE Y K SF+I HGY
Sbjct: 95 FLHGVLEEEIYMEQLEGFKVKGKENFVYKLRKNLYRLKQAPRQWYKKFDSFMISHGYNRT 154
Query: 603 TSDHYVFVK 629
TSDH VF K
Sbjct: 155 TSDHCVFTK 163
Score = 49.7 bits (117), Expect(2) = 9e-15
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Frame = +1
Query: 244 YQLVQL-----AWTLKLLCCSRYRPRSSRIN-KARHIVKGFGQRKGIDFKEIFSPGVTSM 405
Y LV+L A KL+ + + SS++ KAR ++KGFGQ++G+DF+EIF P V M
Sbjct: 14 YDLVKLPKGKKALKNKLVYRLKTKNNSSQLRYKARLVMKGFGQKRGVDFEEIFFP-VVKM 72
Query: 406 SFICVVLGLAGSLNLGVEKFDMKKHF 483
S I VV LNL +E+ D K F
Sbjct: 73 SSIRVV---NAQLNLEIEQLDDKTAF 95
>emb|CAN77763.1| hypothetical protein VITISV_026761 [Vitis vinifera]
Length = 369
Score = 54.3 bits (129), Expect(2) = 2e-14
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +1
Query: 265 WTLKLLCCSRYRPRSSRIN-KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGS 441
W LK + +P S+ KAR ++K F Q+K IDF+EIFSP V M + V+LGLA S
Sbjct: 30 WVLK----RKSKPNKSQPRYKARLVMKDFSQKKVIDFEEIFSP-VVKMYSMRVMLGLATS 84
Query: 442 LNLGVEKFDMKKHF 483
+NL +E+ D+K F
Sbjct: 85 MNLEIEQLDVKTIF 98
Score = 50.8 bits (120), Expect(2) = 2e-14
Identities = 29/69 (42%), Positives = 33/69 (47%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH DL++EIYM Q EGF K KE Y K SF++ HGY
Sbjct: 98 FLHGDLEKEIYMEQPEGFTIKSKEHLVCRLKKSLYGLKQTLRQWYKKFDSFMVKHGYDRT 157
Query: 603 TSDHYVFVK 629
DH VFVK
Sbjct: 158 AFDHCVFVK 166
>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 63.2 bits (152), Expect(2) = 6e-14
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKGF Q+KGIDF EIFSP V MS I VVLGLA SL+L +++ D+K F
Sbjct: 842 KARLVVKGFNQKKGIDFDEIFSP-VVKMSSIRVVLGLAASLDLEIQQMDVKTAF 894
Score = 40.4 bits (93), Expect(2) = 6e-14
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEEY 557
FLH DL +EIYM Q EGF KGKE+Y
Sbjct: 894 FLHGDLDKEIYMEQPEGFVLKGKEDY 919
>emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]
Length = 885
Score = 65.1 bits (157), Expect(2) = 6e-14
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKGF Q+KGIDF EIFS V MS ICVVLGLA SL+L +E+ D+K F
Sbjct: 661 KARLVVKGFSQKKGIDFDEIFS-XVVKMSSICVVLGLATSLDLEIEQMDVKTAF 713
Score = 38.5 bits (88), Expect(2) = 6e-14
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEEY 557
FLH DL +EIYM Q +GF KGKE+Y
Sbjct: 713 FLHGDLDKEIYMEQPKGFIIKGKEDY 738
>emb|CAN77982.1| hypothetical protein VITISV_043417 [Vitis vinifera]
Length = 440
Score = 59.7 bits (143), Expect(2) = 6e-13
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +1
Query: 325 ARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
AR +VKGF Q+KGIDF++IFSP V S I VVLGLA S+NL +E+ D+K F
Sbjct: 43 ARLVVKGFSQKKGIDFEKIFSPMVKMFS-IRVVLGLAASINLEIEQLDVKTTF 94
Score = 40.4 bits (93), Expect(2) = 6e-13
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 19/57 (33%)
Frame = +3
Query: 477 TFLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHG 590
TFLH L+EEIY+ Q EGF KGKE Y K SF++ HG
Sbjct: 93 TFLHGHLEEEIYIEQLEGFTIKGKEHLVCRLKKSLYGLIQAPRQWYKKFDSFMVKHG 149
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 55.1 bits (131), Expect(2) = 8e-13
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKG Q+KGIDF EIF+P V M+ I ++LGLA LNL +E+ D+K F
Sbjct: 235 KARLVVKGCHQKKGIDFDEIFAP-VVKMTSIRMILGLATCLNLELEQLDVKTAF 287
Score = 44.7 bits (104), Expect(2) = 8e-13
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH DL EEIYM Q EGFE KGKE Y K SF+ ++ Y+
Sbjct: 287 FLHGDLHEEIYMEQPEGFEVKGKENFVCKLKKSLYGLKQAPRQWYHKFDSFMSNNEYKRT 346
Query: 603 TSDHYVFVK 629
T+D V+ +
Sbjct: 347 TADPCVYFR 355
>emb|CAN67041.1| hypothetical protein VITISV_030416 [Vitis vinifera]
Length = 509
Score = 63.5 bits (153), Expect(2) = 8e-13
Identities = 39/74 (52%), Positives = 48/74 (64%)
Frame = +1
Query: 259 LAWTLKLLCCSRYRPRSSRINKARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAG 438
L W KL S +PR KAR +VK F Q+K IDF+EIFSP V MS I VVLGLA
Sbjct: 232 LDWVKKLKPFSEEQPRY----KARLVVKSFSQKKDIDFEEIFSP-VVKMSSIRVVLGLAI 286
Query: 439 SLNLGVEKFDMKKH 480
S+NL +E+ D +K+
Sbjct: 287 SMNLEIEQLDRRKY 300
Score = 36.2 bits (82), Expect(2) = 8e-13
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 549 EEYSKLVSFIIDHGYQGITSDHYVFVK 629
E K SF+++HGY G TSDH +FVK
Sbjct: 331 EIVKKFDSFMVEHGYDGTTSDHCMFVK 357
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 60.8 bits (146), Expect(2) = 1e-12
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKGF Q+KGIDF EIF P V MS I VVLGLA SL+L +++ D+K F
Sbjct: 774 KARLVVKGFNQKKGIDFDEIFFP-VVKMSSIRVVLGLAASLDLEIQQMDVKTAF 826
Score = 38.5 bits (88), Expect(2) = 1e-12
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEEY 557
FLH +L +EIYM Q EGF KGKE+Y
Sbjct: 826 FLHGNLDKEIYMEQPEGFVLKGKEDY 851
>emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]
Length = 903
Score = 58.2 bits (139), Expect(2) = 1e-12
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKG+ Q+KGIDF EIFS V MS I VVLGL SL+L +E+ D+K F
Sbjct: 621 KARLVVKGYSQKKGIDFDEIFS-SVVKMSSIRVVLGLVASLDLEIEQMDVKIAF 673
Score = 41.2 bits (95), Expect(2) = 1e-12
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEEY 557
FLH DL +EIYM Q EGF KGKE+Y
Sbjct: 673 FLHGDLNKEIYMEQLEGFIIKGKEDY 698
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 51.6 bits (122), Expect(2) = 2e-12
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
+AR +VKG+ Q++GIDF EIFSP V ++ I VVL + +L+L +E+ D+K F
Sbjct: 852 RARLVVKGYAQKEGIDFNEIFSP-VVRLTTIRVVLAMCAALDLHLEQLDVKTAF 904
Score = 47.0 bits (110), Expect(2) = 2e-12
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH +L+EEIYM+Q EGF+ +GKE Y + SFII Y +
Sbjct: 904 FLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRL 963
Query: 603 TSDHYVFVK 629
+SDH + K
Sbjct: 964 SSDHCTYYK 972
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 51.6 bits (122), Expect(2) = 2e-12
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
+AR +VKG+ Q++GIDF EIFSP V ++ I VVL + +L+L +E+ D+K F
Sbjct: 852 RARLVVKGYAQKEGIDFNEIFSP-VVRLTTIRVVLAMCAALDLHLEQLDVKTAF 904
Score = 47.0 bits (110), Expect(2) = 2e-12
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH +L+EEIYM+Q EGF+ +GKE Y + SFII Y +
Sbjct: 904 FLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRL 963
Query: 603 TSDHYVFVK 629
+SDH + K
Sbjct: 964 SSDHCTYYK 972
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 51.6 bits (122), Expect(2) = 2e-12
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
+AR +VKG+ Q++GIDF EIFSP V ++ I VVL + +L+L +E+ D+K F
Sbjct: 852 RARLVVKGYAQKEGIDFNEIFSP-VVRLTTIRVVLAMCAALDLHLEQLDVKTAF 904
Score = 47.0 bits (110), Expect(2) = 2e-12
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH +L+EEIYM+Q EGF+ +GKE Y + SFII Y +
Sbjct: 904 FLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRL 963
Query: 603 TSDHYVFVK 629
+SDH + K
Sbjct: 964 SSDHCTYYK 972
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 51.6 bits (122), Expect(2) = 2e-12
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
+AR +VKG+ Q++GIDF EIFSP V ++ I VVL + +L+L +E+ D+K F
Sbjct: 852 RARLVVKGYAQKEGIDFNEIFSP-VVRLTTIRVVLAMCAALDLHLEQLDVKTAF 904
Score = 47.0 bits (110), Expect(2) = 2e-12
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH +L+EEIYM+Q EGF+ +GKE Y + SFII Y +
Sbjct: 904 FLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRL 963
Query: 603 TSDHYVFVK 629
+SDH + K
Sbjct: 964 SSDHCTYYK 972
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 58.5 bits (140), Expect(2) = 4e-12
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +1
Query: 322 KARHIVKGFGQRKGIDFKEIFSPGVTSMSFICVVLGLAGSLNLGVEKFDMKKHF 483
KAR +VKGF Q+KGIDF EIFSP V M+ I +L LA SL+L VE+ D+K F
Sbjct: 875 KARLVVKGFEQKKGIDFDEIFSP-VVKMTSIRTILSLAASLDLEVEQLDVKTAF 927
Score = 38.9 bits (89), Expect(2) = 4e-12
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 19/69 (27%)
Frame = +3
Query: 480 FLHSDLKEEIYMMQYEGFEAKGKEE-------------------YSKLVSFIIDHGYQGI 602
FLH DL+EEIYM Q EGFE GK+ Y K SF+ Y
Sbjct: 927 FLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKT 986
Query: 603 TSDHYVFVK 629
SD V+ K
Sbjct: 987 YSDPCVYFK 995