BLASTX nr result
ID: Paeonia23_contig00024968
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00024968
(713 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004159272.1| PREDICTED: uncharacterized mitochondrial pro... 106 7e-21
emb|CAN78655.1| hypothetical protein VITISV_010042 [Vitis vinifera] 87 8e-20
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 90 2e-18
gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis c... 87 4e-18
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle... 86 1e-17
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle... 86 1e-17
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle... 84 2e-17
gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus] 86 2e-17
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle... 85 2e-17
gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis c... 84 3e-17
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle... 84 3e-17
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle... 84 3e-17
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus] 86 4e-17
gb|AGH20665.1| reverse transcriptase, partial [Turritis glabra] 84 4e-17
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle... 84 4e-17
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 84 5e-17
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 84 5e-17
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 84 5e-17
gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis c... 85 9e-17
gb|AGH20667.1| reverse transcriptase, partial [Arabis hirsuta] 83 9e-17
>ref|XP_004159272.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Cucumis sativus]
Length = 170
Score = 106 bits (265), Expect = 7e-21
Identities = 58/113 (51%), Positives = 77/113 (68%), Gaps = 8/113 (7%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F + +++ FEM DMG+LHYFL IEVK N + I QK +A DLL KF+M A P NTPM
Sbjct: 6 FRESMKKEFEMTDMGLLHYFLGIEVKQGDNEIAIFQKKYAKDLLKKFKMENAYPANTPME 65
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLM--------FLSTPKRT 658
GLK+S + + FDAT+Y LVG+LM LTTTRP++M F+++PKR+
Sbjct: 66 LGLKLSKHDVSEAFDATIYRSLVGSLMYLTTTRPDIMFFVSLLSRFMTSPKRS 118
>emb|CAN78655.1| hypothetical protein VITISV_010042 [Vitis vinifera]
Length = 870
Score = 87.4 bits (215), Expect(3) = 8e-20
Identities = 44/98 (44%), Positives = 63/98 (64%)
Frame = +2
Query: 341 SF*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPM 520
SF K + FEM+D+G++HYFL IEV G+FI QK ++L + +M +P NTP
Sbjct: 571 SFKKSMXAEFEMSDLGMMHYFLGIEVMQSSTGIFISQKKCVGEILDRIQMKDCNPVNTPS 630
Query: 521 HAGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLM 634
G+K++ DN + D TLY +VG+LM LT TRP++M
Sbjct: 631 EFGMKLNKDNGGKNVDDTLYKEIVGSLMYLTATRPDIM 668
Score = 32.0 bits (71), Expect(3) = 8e-20
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 4/30 (13%)
Frame = +3
Query: 279 EGKTLIIYLYVDNLIFISNS----EAFKKT 356
EGK LI+ LYVD+LI+ N+ E+FKK+
Sbjct: 546 EGKMLIVCLYVDDLIYXGNNTAMFESFKKS 575
Score = 24.3 bits (51), Expect(3) = 8e-20
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 202 NSVVTY-QSEHFSSCP*EHAFYIK 270
N + TY +E F CP EH +IK
Sbjct: 519 NRIETYFLNEGFQKCPYEHTLFIK 542
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 89.7 bits (221), Expect(2) = 2e-18
Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
Frame = +2
Query: 374 MADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMHAGLKISSDNA 553
M+DMG++HYFL IEV + I Q+ +A+DLL KFRM ASP NTPM A LK+ D+
Sbjct: 995 MSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDANLKLCKDDI 1054
Query: 554 *DDFDATLYTRLVGNLM*LTTTRPNLM--------FLSTPKRT 658
+ D +LY LVG+LM LT TRP+++ F++ PKR+
Sbjct: 1055 GEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLSRFMTNPKRS 1097
Score = 29.3 bits (64), Expect(2) = 2e-18
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 232 FSSCP*EHAFYIKEDK 279
F CP EHA Y+KEDK
Sbjct: 969 FRRCPYEHALYVKEDK 984
>gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 315
Score = 87.0 bits (214), Expect(3) = 4e-18
Identities = 41/98 (41%), Positives = 69/98 (70%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G+++Y+L IEVK NG+FI Q+ +A ++L KF+++ ++P +TPM
Sbjct: 209 FKKEMTKEFEMTDIGLMYYYLGIEVKQEDNGIFITQEGYAKEVLKKFKLDDSNPVSTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K S + + D TL+ LVG+L LT TRP++++
Sbjct: 269 CGIKFSKNEEGERVDPTLFKNLVGSLRYLTCTRPDILY 306
Score = 26.2 bits (56), Expect(3) = 4e-18
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 163 FKEQDFIKCPYEHALYIKIQK 183
Score = 24.6 bits (52), Expect(3) = 4e-18
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKK 211
>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 85.5 bits (210), Expect(3) = 1e-17
Identities = 41/98 (41%), Positives = 67/98 (68%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 209 FKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + + D T + LVG+L LT TRP++++
Sbjct: 269 CGIKLSKNEEGEGVDPTTFKSLVGSLRYLTCTRPDILY 306
Score = 25.8 bits (55), Expect(3) = 1e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 163 FKEKDFIKCPYEHALYIKIQK 183
Score = 24.6 bits (52), Expect(3) = 1e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKK 211
>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera] gi|389595484|gb|AFK88545.1| reverse
transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 85.5 bits (210), Expect(3) = 1e-17
Identities = 41/98 (41%), Positives = 67/98 (68%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 209 FKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + + D T + LVG+L LT TRP++++
Sbjct: 269 CGIKLSKNEEGEGVDPTTFKSLVGSLRYLTCTRPDILY 306
Score = 25.8 bits (55), Expect(3) = 1e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 163 FKEKDFIKCPYEHALYIKIQK 183
Score = 24.6 bits (52), Expect(3) = 1e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKK 211
>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 84.0 bits (206), Expect(3) = 2e-17
Identities = 40/98 (40%), Positives = 67/98 (68%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + F+M D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 209 FKKEMTKEFKMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + + D T + LVG+L LT TRP++++
Sbjct: 269 CGIKLSKNEEGEGVDPTTFKSLVGSLRYLTCTRPDILY 306
Score = 26.9 bits (58), Expect(3) = 2e-17
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F+ CP EHA YIK K
Sbjct: 163 FKEKDFTKCPYEHALYIKIQK 183
Score = 24.6 bits (52), Expect(3) = 2e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEKFKK 211
>gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 86.3 bits (212), Expect(3) = 2e-17
Identities = 42/97 (43%), Positives = 68/97 (70%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 209 FKKEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQEGYAKEVLKKFKMDDSNPVCTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLM 634
G+K+S++ + D TL+ LVG+L LT TRP+++
Sbjct: 269 CGVKLSNEEEGESVDPTLFKSLVGSLRYLTCTRPDIL 305
Score = 24.6 bits (52), Expect(3) = 2e-17
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIK 270
++ + F CP EHA YIK
Sbjct: 163 FKEKGFIKCPYEHALYIK 180
Score = 24.3 bits (51), Expect(3) = 2e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPIMFEDFKK 211
>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 84.7 bits (208), Expect(3) = 2e-17
Identities = 41/98 (41%), Positives = 67/98 (68%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 209 FKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + + D T + LVG+L LT TRP++++
Sbjct: 269 YGIKLSKNEEGEGVDPTTFKSLVGSLRYLTCTRPDILY 306
Score = 25.8 bits (55), Expect(3) = 2e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 163 FKEKDFIKCPYEHALYIKIQK 183
Score = 24.6 bits (52), Expect(3) = 2e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPSIFEEFKK 211
>gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 315
Score = 84.3 bits (207), Expect(3) = 3e-17
Identities = 40/98 (40%), Positives = 68/98 (69%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G+++Y+L IEVK N +FI Q+ +A ++L KF+++ ++P +TPM
Sbjct: 209 FKKEMTKEFEMTDIGLMYYYLGIEVKQEDNEIFITQEGYAKEVLKKFKLDDSNPVSTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K S + + D TL+ LVG+L LT TRP++++
Sbjct: 269 CGIKFSKNEEGESVDPTLFKSLVGSLRYLTCTRPDILY 306
Score = 25.8 bits (55), Expect(3) = 3e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 163 FKEKDFIKCPYEHALYIKIQK 183
Score = 24.6 bits (52), Expect(3) = 3e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKK 211
>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 84.3 bits (207), Expect(3) = 3e-17
Identities = 40/98 (40%), Positives = 67/98 (68%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L +F+M+ ++P TPM
Sbjct: 209 FKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKRFKMDDSNPVTTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + + D T + LVG+L LT TRP++++
Sbjct: 269 CGIKLSKNEEGEGVDPTTFKSLVGSLRYLTCTRPDILY 306
Score = 25.8 bits (55), Expect(3) = 3e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 163 FKEKDFIKCPYEHALYIKIQK 183
Score = 24.6 bits (52), Expect(3) = 3e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKK 211
>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 84.3 bits (207), Expect(3) = 3e-17
Identities = 40/98 (40%), Positives = 67/98 (68%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 209 FKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + + D ++ LVG+L LT TRP++++
Sbjct: 269 CGIKLSKNEEGEGVDPIIFKSLVGSLRYLTCTRPDILY 306
Score = 25.8 bits (55), Expect(3) = 3e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 163 FKEKDFIKCPYEHALYIKIQK 183
Score = 24.6 bits (52), Expect(3) = 3e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKK 211
>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 85.9 bits (211), Expect(3) = 4e-17
Identities = 42/97 (43%), Positives = 67/97 (69%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 209 FKKEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQEGYAKEVLKKFKMDDSNPVCTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLM 634
G+K+S + + D TL+ LVG+L LT TRP+++
Sbjct: 269 CGVKLSKEEEGESVDPTLFKSLVGSLRYLTCTRPDIL 305
Score = 24.3 bits (51), Expect(3) = 4e-17
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIK 270
+ + F CP EHA YIK
Sbjct: 163 FNEKGFIKCPYEHALYIK 180
Score = 24.3 bits (51), Expect(3) = 4e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPIMFEDFKK 211
>gb|AGH20665.1| reverse transcriptase, partial [Turritis glabra]
Length = 315
Score = 84.0 bits (206), Expect(3) = 4e-17
Identities = 41/98 (41%), Positives = 67/98 (68%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+ ++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P +TPM
Sbjct: 209 FKKEMTKEFEMTDIRLMSYYLGIEVKQEENGIFITQECYAKEILKKFKMDDSNPVSTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + + D TL LVG+L LT TRP++++
Sbjct: 269 CGIKLSKNEEGERVDLTLLKNLVGSLRYLTCTRPDILY 306
Score = 26.2 bits (56), Expect(3) = 4e-17
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +3
Query: 282 GKTLIIYLYVDNLIFISNS----EAFKK 353
G LI LYVD+LIF N+ E FKK
Sbjct: 184 GDILIACLYVDDLIFTGNNPSMFEEFKK 211
Score = 24.3 bits (51), Expect(3) = 4e-17
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIK 270
++ + F CP EHA YIK
Sbjct: 163 FKEKIFIKCPYEHALYIK 180
>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 84.0 bits (206), Expect(3) = 4e-17
Identities = 40/98 (40%), Positives = 67/98 (68%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 209 FKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFISQEGYAKEVLKKFKMDDSNPVTTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + + D T + LVG+L LT T+P++++
Sbjct: 269 CGIKLSKNEEGEGVDPTTFKSLVGSLRYLTCTKPDILY 306
Score = 25.8 bits (55), Expect(3) = 4e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 163 FKKKDFIKCPYEHALYIKIQK 183
Score = 24.6 bits (52), Expect(3) = 4e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 187 LIACLYVDDLIFTGNNPSMFEEFKK 211
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 83.6 bits (205), Expect(3) = 5e-17
Identities = 41/98 (41%), Positives = 66/98 (67%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 1048 FKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPME 1107
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + D T + LVG+L LT TRP++++
Sbjct: 1108 CGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILY 1145
Score = 25.8 bits (55), Expect(3) = 5e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 1002 FKEKDFIKCPYEHALYIKIQK 1022
Score = 24.6 bits (52), Expect(3) = 5e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 1026 LIACLYVDDLIFTGNNPSMFEEFKK 1050
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 83.6 bits (205), Expect(3) = 5e-17
Identities = 41/98 (41%), Positives = 66/98 (67%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 1048 FKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPME 1107
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + D T + LVG+L LT TRP++++
Sbjct: 1108 CGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILY 1145
Score = 25.8 bits (55), Expect(3) = 5e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 1002 FKEKDFIKCPYEHALYIKIQK 1022
Score = 24.6 bits (52), Expect(3) = 5e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 1026 LIACLYVDDLIFTGNNPSIFEEFKK 1050
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 83.6 bits (205), Expect(3) = 5e-17
Identities = 41/98 (41%), Positives = 66/98 (67%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F K++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P TPM
Sbjct: 1016 FKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPME 1075
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G+K+S + D T + LVG+L LT TRP++++
Sbjct: 1076 CGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILY 1113
Score = 25.8 bits (55), Expect(3) = 5e-17
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIKEDK 279
++ + F CP EHA YIK K
Sbjct: 970 FKEKDFIKCPYEHALYIKIQK 990
Score = 24.6 bits (52), Expect(3) = 5e-17
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS----EAFKK 353
LI LYVD+LIF N+ E FKK
Sbjct: 994 LIACLYVDDLIFTGNNPSMFEEFKK 1018
>gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 315
Score = 84.7 bits (208), Expect(3) = 9e-17
Identities = 41/98 (41%), Positives = 67/98 (68%)
Frame = +2
Query: 344 F*KDLERLFEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMH 523
F +++ + FEM D+G++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P +TPM
Sbjct: 209 FKQEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVSTPME 268
Query: 524 AGLKISSDNA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
G K+S + D TL+ LVG+L LT TRP++++
Sbjct: 269 CGSKLSKHEEGESIDPTLFKSLVGSLRYLTCTRPDILY 306
Score = 25.8 bits (55), Expect(3) = 9e-17
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIK 270
++ ++F CP EHA YIK
Sbjct: 163 FKEKNFIKCPYEHALYIK 180
Score = 22.7 bits (47), Expect(3) = 9e-17
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 291 LIIYLYVDNLIFISNS 338
LI LY+D+LIF +N+
Sbjct: 187 LIACLYIDDLIFTNNN 202
>gb|AGH20667.1| reverse transcriptase, partial [Arabis hirsuta]
Length = 315
Score = 82.8 bits (203), Expect(3) = 9e-17
Identities = 40/90 (44%), Positives = 62/90 (68%)
Frame = +2
Query: 368 FEMADMGILHYFLEIEVK*IYNGVFILQK*HANDLLIKFRMNGASPWNTPMHAGLKISSD 547
FEM D+ ++ Y+L IEVK NG+FI Q+ +A ++L KF+M+ ++P +TPM G K+S
Sbjct: 217 FEMTDIRLMSYYLAIEVKQEDNGIFITQEGYAKEILKKFKMDDSNPVSTPMECGAKLSKH 276
Query: 548 NA*DDFDATLYTRLVGNLM*LTTTRPNLMF 637
+D D TL+ LVG+L LT TRP++++
Sbjct: 277 EEGEDVDPTLFKSLVGSLRYLTCTRPHILY 306
Score = 26.2 bits (56), Expect(3) = 9e-17
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 217 YQSEHFSSCP*EHAFYIK 270
+++++F CP EHA YIK
Sbjct: 163 FKAKNFIKCPYEHALYIK 180
Score = 24.3 bits (51), Expect(3) = 9e-17
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 282 GKTLIIYLYVDNLIFISNS 338
G LI LYVD+LIF N+
Sbjct: 184 GDILIACLYVDDLIFTGNN 202